Cp4.1LG01g09540 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g09540
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Heterogeneous nuclear ribonucleoprotein
Location	Cp4.1LG01 : 4202402 .. 4208118 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGCCTCGACGCAAAATTTTGATTCTTCTTCTCAAAGAGTTGGTTCTGTTCTATTGAAGGGACTCGGTAGTTCTCCAATGGAGGGAACCAGCAAAACCACCAAAAGAAAGCTGGTCAAGAAATCTGACAACAAGGTCGATAAGAAACTCAAGAAGGAGCTTGATGATCCCGTTTCCTCTCAGCCACATGACGATGCCTCCGACTCCGATTTGGACGATCTTCCCAAACTCCTCGAGCCCTTCTCCAAGACACAACTAATCGAGCTCATCTGCACCACTGCTCTCAAAGATGCTAATCTCGAAGCCCAAATTCGAGCTGCTGCCGACCGTGATGTCACGCACCGCAAGATTTTCGTCCATGGCCTCGGTTGGGACACCACCAAAGAAACCCTAACTTCGGTTTTTGAATCATTTGGTGAAATTGAAGACTGCAATGTGGTTTTGGATAAGAATACAGGGAAAGCTAAGGGCTATGGGTTTATTTTGTTCAAATCCCGTCAGGGTGCGACTAAGGCGTTGAAGGAACCTAGGAAGAAGATTAATAACAGGATGGCTTCGTGTCAATTGGCTTCTGTGGGTTCAGTGCCGCCGCCTCAAAGTCAGGAGGTTGGGCCGCGGAAGATTTATGTGGCGAATGTGCACCATAACGTGGATGCTGAGAGGCTTAGGACGTTCTTTGCGAAGTTTGGGGAATTGGAGATGGGTCCGATTGGGTTCGATCCCGAAACAGGGAAATCGAGGGGTTATGCTATTTTTATTTACAGAACAAATGAAGGTGCGAGGAGGGCTCTTGAGGAGCCACACAAAGTATTCGAAGGGAACAAATTGCATTGCCAGAGGGCGGCTGAGGGGAAGAACAAGAATCAGAATTCGACGCAGGCAGTGCAAAGCTTGGCGCAGACTCAGCCGCCGATGATGGCAGCCATGGCTACAGCTTCAAATTTGCCATTGTTTGCTCAACATCCGAGCCTCAATCCTGTGTGCGGTGGATTTGGGAACCCAGCTTTGGGAGGTGGAATGTTAAACCAGGGAGTAGTTCCCATGAGTCAAGTGGGTCTGGTTGGTAGTTCAGTTGGGGCTGGGATAGGCTTGAGTGGTTACAGTGGGGGTTCATATGGCTTAAGCCAATTAAGTGCCGGTGGTTCGTCAATGCTAGGCTCTTACGGGTCCGATTCTTCATCACTGAAGGGGTTGCCGCACATTTATTCGAGCACAATGCTTGGCAAGGCCGTATCGGATCGGGGTCCGGCGGCTTCTGGTGGGTCTCTCGGAGGATACACATCATATTTATGGTATGAGATGTTTCTTATTCTTTTTACTTGCCGCACTTTAAGCCTTCCATTTATATGTTTCAACTATCCATTCGTGCTTAGCATTAATTATAGTGACAGGTAGAATGTATTAATAATTAATGGGTGCTATTAGTACTGGCATCAACAGCAGCCTGTGTGTATAATTATTATTTAGGTAATTGGTCCGTATAATCCCTAAGGCTACCACTAGTTTGTAATTTTAAGCGTTTCTAATTATTGTATACCTCTTAGTAATAAGGTGGTTAAAGATGCCCTTCTCGAAAGGTAGTCAGGAACACTGGCCAAGACAACTCTATTTAATACTCCCAACGTCTTGTCTATCTATATTTAGGATGCATTGTAGAGTCGTGAGAGTGAAGTGGGCGAAAAAGAATTATAGACTTCTTTGGAAAGATTGAGGTAAGAAAGGAGGGTTATAAATTGCATCTAGTGAACTAGAGGAGAATGGCCTTGTCTCTGTGGTATGCAAGAGGTTTTAGGAGAGGTAATATCTACAGTGTGTAGGTTGATGCGACTCCAATTAGAGTTAAAATTTATGCCCAACGGGCCTATCAATTTGAGAAAAACGAGGTCGAAATCGACTTGTTGTAAAACCAAACTGCCTGCTTGACCAAAAAACCACNTTTCAAGTAAATATTACGTAAACTAAATTTAGAAATTCAAAAGTAATATAATTAATAGTATACTAAAAGAAATCGGATGGTTACTANAATTCTAATACCAAACTAATTTTTCTGGTTATGAAATTGTACCCGCCAATCAATTTACTTGCTTTGGTTGGCTCTTTTAGTTTCATTTTGGCCGCATAGTTACCGTAAAAAAAGGGTATAGAACAGTATTTATGTGTTTTATATACTTTTAGGCTTTTCTTGTTGGCATGCAACAAAGGAGCAGATATTCGCTTAAAAGCTGATTTCATGGCAGTTGAGGTGAGGTCTAAGTAAATTCACNAGCATTAATTATAGTGACAGGTAGAATGTATTAATAATTAATGGGTGCTATTAGTACTGGCATCAACAGCAGCCTGTGTGTATAATTATTATTTAGGTAATTGGTCCGTATAATCCCTAAGGCTACCACTAGTTTGTAATTTTAAGCGTTTCTAATTATTGTATACCTCTTAGTAATAAGGTGGTTAAAGATGCCCTTCTCGAAAGGTAGTCAGGAACACTGGCCAAGACAACTCTATTTAATACTCCCAACGTCTTGTCTATCTATATTTAGGATGCATTGTAGAGTCGTGAGAGTGAAGTGGGCGAAAAAGAATTATAGACTTCTTTGGAAAGATTGAGGTAAGAAAGGAGGGTTATAAATTGCATCTAGTGAACTAGAGGAGAATGGCCTTGTCTCTGTGGTATGCAAGAGGTTTTAGGAGAGGTAATATCTACAGTGTGTAGGTTGATGCGACTCCAATTAGAGTTAAAATTTATGCCCAACGGGCCTATCAATTTGAGAAAAACGAGGTCGAAATCGACTTGTTGTAAAACCAAACTGCCTGCTTGACCAAAAAACCACCCCAATGGACTACCAAGCGTACAAGAATCTAATCAAATTTGACCAAATCAACCCAAATTCTAATACCAAACTAATTTTTCTGGTTATGAAATTGTACCCGCCAATCAATTTACTTGCTTTGGTTGGCTCTTTTAGTTTCATTTTGGCCGCATAGTTACCGTAAAAAAAGGGTATAGAACAGTATTTATGTGTTTTATATACTTTTAGGCTTTTCTTGTTGGCATGCAACAAAGGAGCAGATATTCGCTTAAAAGCTGATTTCATGGCAGTTGAGGTGAGGTCTAAGTAAATTCACAATGAAGCTTGCTGACATCTTTAATAGGTATAAAAGCAATACTATTTAGAGCTACTTTAAAAATTTGCATGGAGCTCATCAGGCATCTATTTGTGTCGAGGGTCTTAGACTGGATGCTTACATAGCCAACATAGGGATCTGGCTCACAATTCAACCAAAGCAATTAAGATTAACAAGTCCTGGAGTTTTCTTATTCATGATAGTTCAACTAATTCGTGATAGAGCCCTCTATAGTTACTATATTAATAGGGTGAAGGCTTTTTAAATCCTTAAAGATGTCAAGAGTGTTTCGATAAAGGTATCCTAGCTAGTGAATTACCTTTTTCCTGGGATATGTGCCAAAACATCTTGGGATAGTTGTTTCTTTTGGTTGTATCTTGGGTGTTGATGTTTGAATTAGAGATCACTGACAGATTATCTGTTCCTATACTCTTCCTATCTTGGGGGAGAGGAACGGATATTTCAAGATAGGAAGAGTATAGGGAGGAGGTTCAAAGGGGGTTCACATTATTGACTCTCCCTTGTATTTCTTCTAATAAGTTCTTCAGTGATTTTCCTACTTTTTTGTTTAATGTATTTCTATTATCAGCAGTCGGAGCTCTTTTTTCCAAGTGTGGTTATGACGGTCCCTTTTTTGATTGGCTTGACCTTGTTCGTCCTCTCCTTCTTTCTCTTCTTTTTTAATTATTAATTTTGGGTTTGTATGGCCCCTACATGTTGTTCCTGCAATTTTCTTAATGAAGTCTCTTGTGTGTTTCGGTCTGTATGGCCCCTACTTACGTACATATAAACCACTTATGTGTTGGTTGCATTACTTCTCAAAGTGATTCTACAAATGCAGATTACCATATATTATTTTAAAATGACTTTTTGGAGAACTAACTTCCAAATGTTTCTTAAAAAAAGTACTTATAAACCAATTTGATTTTTTTAGAATGATTTTTATTGATCACCAAATAGTGCAAATGTTAGGAAAAACACTTCTAGCCATCTAATCACTAAGATATCAAACTCACACCAACTATCTCCAACTTTTAATGATAGCTCTACTCTAACTTCACCCCGCCCAAACCTAAATTAAGAAAGAAAGTTCTTCCGTGGGCCACAATTGTTTTTAGCTTTCTGTTCTAATTTGATTTATATCTTGTTTTCATTTATTTTCCTTCAGATTTTTCCTGGTCTTCCGATGATTTGAAAAGTGATATTTTATTGTAAAATTTCATTCTTTTTGACTTCTTCATCAAAAGTTTATTATTATTATTATTAATAATATTATTGTATTTCCTTGTGATCACGAATTCTTAAATCGATCCCATTAGATGTTGCTTTTCTTTTAATTTCGAGCCTACTTGGTTTGGTCTTCATCTTTTATAAGTATTACTTTCGGATTACTTTAATCACACTTAATTAAAATGGTTTTTATGCTCCCCTTTGATGATCTTTTCCTTTTCTTCTTTTTTTCCCCCTTTGCTATGCTTCTTCTGATTGTATTTATTTTGGAAACTGCTGATTTTGTTGTATTTCAGTTATTAGTAATATTGTGGATGTATTTTTGGTTTCTAATATTTTCTTCTCTTTTTTTTCTTTTTCGGATTTCTTGGTTTCATTTTTCTTATTTAAATCTTCAACTTCATTGTTTTGATGGGAGTCTTCATTTGACAGGCCAGATTATTAGTTTGCATTGTCTTATTTCTCTTAGATGCTTGGGAATCCATATTTGCGTTTGAGGTGCTGCCGAACTTGTGGATGAATGAACCTGTACTTTTGGGAAAGTTTATGTTAAGAGCTTCATTTGGGCTGATATGGATTTGATACCTTTTTCCTACAACTCCTTTTGTTTCCTTTTTTTGTTTTCCCTTCTTTCTCCTTTTATTCTGTCCTCCCCTCTCTTAATTTCTTTTATGTAGTAAGAACCTGCTGACGGGCACTAGTCATCCTATGTTTTATAATTCTACTCTGTTGATATCACTTTTAATCTTTTAAAAGTTTTTTATATTTATTGTTGAGTATTACTTTTTCTGGTGTAATTTCTTTTTCCTCCAGTACCTTCGTCTCTTAATCTTGGGCTTCTTAGTTATTATCTTTCCTGACTAATAATAATAAATAGAGGTTACCCTCGTGTGCTCTTGAATGTGTTAATTAAGTTCCTTTTAAAGTATGAGTTCAATCTTTAGGACTAATTAATCTTGTTAGACAATCCCTTTCTTAAAAGATTCAGAAGGGGTGATGAGATAAGAAGTTCATTATCTGGCTAAGTTTAAAACTGTTCTTCGGTCCTACTGTTCTGTTAATTTTCTAGACTGTGAATATAATATTATGTTCTTGTGATGCTGGTTCAGGATTAGTAGTGGAGGATCTTTCCTTTGCTTTGGTAGCAGTGTTCACTGCTTCTTTGCCTTCATCCTCATTCTCACTCACTCTCATCATTTTTGCCTCTACTTCCATTCTCATGTTCTTCCCTGTTCATCGCCTTCATTGTTGTCATTGCCTGTTCATATTTTCCATGTTCTTGTTTCCCTAGTTTTCATCGAATTGGTGCTTACAATTGAACTGTGAATTGGGTTGTTTGATTGTCAAAGTTTTTCAGTTGGTAA

mRNA sequence

ACCGCCTCGACGCAAAATTTTGATTCTTCTTCTCAAAGAGTTGGTTCTGTTCTATTGAAGGGACTCGGTAGTTCTCCAATGGAGGGAACCAGCAAAACCACCAAAAGAAAGCTGGTCAAGAAATCTGACAACAAGGTCGATAAGAAACTCAAGAAGGAGCTTGATGATCCCGTTTCCTCTCAGCCACATGACGATGCCTCCGACTCCGATTTGGACGATCTTCCCAAACTCCTCGAGCCCTTCTCCAAGACACAACTAATCGAGCTCATCTGCACCACTGCTCTCAAAGATGCTAATCTCGAAGCCCAAATTCGAGCTGCTGCCGACCGTGATGTCACGCACCGCAAGATTTTCGTCCATGGCCTCGGTTGGGACACCACCAAAGAAACCCTAACTTCGGTTTTTGAATCATTTGGTGAAATTGAAGACTGCAATGTGGTTTTGGATAAGAATACAGGGAAAGCTAAGGGCTATGGGTTTATTTTGTTCAAATCCCGTCAGGGTGCGACTAAGGCGTTGAAGGAACCTAGGAAGAAGATTAATAACAGGATGGCTTCGTGTCAATTGGCTTCTGTGGGTTCAGTGCCGCCGCCTCAAAGTCAGGAGGTTGGGCCGCGGAAGATTTATGTGGCGAATGTGCACCATAACGTGGATGCTGAGAGGCTTAGGACGTTCTTTGCGAAGTTTGGGGAATTGGAGATGGGTCCGATTGGGTTCGATCCCGAAACAGGGAAATCGAGGGGTTATGCTATTTTTATTTACAGAACAAATGAAGGTGCGAGGAGGGCTCTTGAGGAGCCACACAAAGTATTCGAAGGGAACAAATTGCATTGCCAGAGGGCGGCTGAGGGGAAGAACAAGAATCAGAATTCGACGCAGGCAGTGCAAAGCTTGGCGCAGACTCAGCCGCCGATGATGGCAGCCATGGCTACAGCTTCAAATTTGCCATTGTTTGCTCAACATCCGAGCCTCAATCCTGTGTGCGGTGGATTTGGGAACCCAGCTTTGGGAGGTGGAATGTTAAACCAGGGAGTAGTTCCCATGAGTCAAGTGGGTCTGGTTGGTAGTTCAGTTGGGGCTGGGATAGGCTTGAGTGGTTACAGTGGGGGTTCATATGGCTTAAGCCAATTAAGTGCCGGTGGTTCGTCAATGCTAGGCTCTTACGGGTCCGATTCTTCATCACTGAAGGGGTTGCCGCACATTTATTCGAGCACAATGCTTGGCAAGGCCGTATCGGATCGGGGTCCGGCGGCTTCTGGTGGGTCTCTCGGAGGATACACATCATATTTATGTTGGTAA

Coding sequence (CDS)

ACCGCCTCGACGCAAAATTTTGATTCTTCTTCTCAAAGAGTTGGTTCTGTTCTATTGAAGGGACTCGGTAGTTCTCCAATGGAGGGAACCAGCAAAACCACCAAAAGAAAGCTGGTCAAGAAATCTGACAACAAGGTCGATAAGAAACTCAAGAAGGAGCTTGATGATCCCGTTTCCTCTCAGCCACATGACGATGCCTCCGACTCCGATTTGGACGATCTTCCCAAACTCCTCGAGCCCTTCTCCAAGACACAACTAATCGAGCTCATCTGCACCACTGCTCTCAAAGATGCTAATCTCGAAGCCCAAATTCGAGCTGCTGCCGACCGTGATGTCACGCACCGCAAGATTTTCGTCCATGGCCTCGGTTGGGACACCACCAAAGAAACCCTAACTTCGGTTTTTGAATCATTTGGTGAAATTGAAGACTGCAATGTGGTTTTGGATAAGAATACAGGGAAAGCTAAGGGCTATGGGTTTATTTTGTTCAAATCCCGTCAGGGTGCGACTAAGGCGTTGAAGGAACCTAGGAAGAAGATTAATAACAGGATGGCTTCGTGTCAATTGGCTTCTGTGGGTTCAGTGCCGCCGCCTCAAAGTCAGGAGGTTGGGCCGCGGAAGATTTATGTGGCGAATGTGCACCATAACGTGGATGCTGAGAGGCTTAGGACGTTCTTTGCGAAGTTTGGGGAATTGGAGATGGGTCCGATTGGGTTCGATCCCGAAACAGGGAAATCGAGGGGTTATGCTATTTTTATTTACAGAACAAATGAAGGTGCGAGGAGGGCTCTTGAGGAGCCACACAAAGTATTCGAAGGGAACAAATTGCATTGCCAGAGGGCGGCTGAGGGGAAGAACAAGAATCAGAATTCGACGCAGGCAGTGCAAAGCTTGGCGCAGACTCAGCCGCCGATGATGGCAGCCATGGCTACAGCTTCAAATTTGCCATTGTTTGCTCAACATCCGAGCCTCAATCCTGTGTGCGGTGGATTTGGGAACCCAGCTTTGGGAGGTGGAATGTTAAACCAGGGAGTAGTTCCCATGAGTCAAGTGGGTCTGGTTGGTAGTTCAGTTGGGGCTGGGATAGGCTTGAGTGGTTACAGTGGGGGTTCATATGGCTTAAGCCAATTAAGTGCCGGTGGTTCGTCAATGCTAGGCTCTTACGGGTCCGATTCTTCATCACTGAAGGGGTTGCCGCACATTTATTCGAGCACAATGCTTGGCAAGGCCGTATCGGATCGGGGTCCGGCGGCTTCTGGTGGGTCTCTCGGAGGATACACATCATATTTATGTTGGTAA

Protein sequence

TASTQNFDSSSQRVGSVLLKGLGSSPMEGTSKTTKRKLVKKSDNKVDKKLKKELDDPVSSQPHDDASDSDLDDLPKLLEPFSKTQLIELICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNPVCGGFGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGSDSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYLCW

Homology

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BLAST of Cp4.1LG01g09540 vs. Swiss-Prot
Match: UBA2B_ARATH (UBP1-associated protein 2B OS=Arabidopsis thaliana GN=UBA2B PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.1e-58
Identity = 153/401 (38.15%), Postives = 220/401 (54.86%), Query Frame = 1


Query: 37  KLVKKSDNKVDKKLKKELDDPVSSQPHDDASDSDLDDLPKLLEPFSKTQLIELICTTALK 96
           K + + + K +  ++ E      +Q ++D  D + + +  LLEPFSK QL+ L+   A +
Sbjct: 52  KEMHEEEAKGEDNIEAETSSGSGNQGNED--DDEEEPIEDLLEPFSKDQLLILLKEAAER 111

Query: 97  DANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTGKAK 156
             ++  +IR  AD D+ HRKIFVHGLGWDT  ++L   F+ +GEIEDC  V+DK +G++K
Sbjct: 112 HRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSK 171

Query: 157 GYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGS------VPPPQ--SQEVGPRKI 216
           GYGFILFKSR GA  ALK+P+KKI  RM +CQLAS+G       V P Q  + E   RKI
Sbjct: 172 GYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQGNPVVAPAQHFNPENVQRKI 231

Query: 217 YVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPH 276
           YV+NV  ++D ++L  FF++FGE+E GP+G D  TG+ +G+A+F+YR+ E A++ALEEPH
Sbjct: 232 YVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAKKALEEPH 291

Query: 277 KVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNPVC 336
           K FEG+ LHC +A +G  + +       S  Q             N        +     
Sbjct: 292 KTFEGHVLHCHKANDGPKQVKQHQHNHNSHNQ-------------NSRYQRNDNNGYGAP 351

Query: 337 GGFGNPALGGGMLNQGVVPMSQVGLVG--SSVGAGIGLSGYSGGSYGLSQLSAGGSSMLG 396
           GG G+   G     Q   P     L    +S GAG+GL+             A G ++LG
Sbjct: 352 GGHGHFIAGNNQAVQAFNPAIGQALTALLASQGAGLGLN------------QAFGQALLG 411

Query: 397 SYGSDS-SSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGY 427
           + G+ S  ++ G+P  Y +          G  A  G  GGY
Sbjct: 412 TLGTASPGAVGGMPSGYGTQANISPGVYPGYGAQAGYQGGY 425

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BLAST of Cp4.1LG01g09540 vs. Swiss-Prot
Match: UBA2A_ARATH (UBP1-associated protein 2A OS=Arabidopsis thaliana GN=UBA2A PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.8e-57
Identity = 164/451 (36.36%), Postives = 231/451 (51.22%), Query Frame = 1


Query: 24  SSPMEGTSKTTKRKLVKKSDNKVD------KKLKKELDDPVSSQPHDDASDS-------- 83
           S  ++ T +  ++ ++K  DN+ D      +++++E ++ V     +D  D         
Sbjct: 19  SQKLKQTPEEEQQLVIKNQDNQGDVEEVEYEEVEEEQEEEVEDDDDEDDGDENEDQTDGN 78

Query: 84  --------------DLDDLP--KLLEPFSKTQLIELICTTALKDANLEAQIRAAADRDVT 143
                         D DD P   LLEPFSK Q++ L+   A K  ++  +IR  AD D  
Sbjct: 79  RIEAAATSGSGNQEDDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPV 138

Query: 144 HRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTGKAKGYGFILFKSRQGATKAL 203
           HRKIFVHGLGWDT  ETL   F+ +GEIEDC  V DK +GK+KGYGFIL+KSR GA  AL
Sbjct: 139 HRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNAL 198

Query: 204 KEPRKKINNRMASCQLASVGSV------------PPPQ--SQEVGPRKIYVANVHHNVDA 263
           K+P+KKI +RM +CQLAS G V             P Q  + E   +KIYV+NV   +D 
Sbjct: 199 KQPQKKIGSRMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDP 258

Query: 264 ERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKVFEGNKLHCQ 323
           ++L  FF+KFGE+E GP+G D  TG+ +G+ +F+Y+++E A+RALEEPHK FEG+ LHCQ
Sbjct: 259 QKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQ 318

Query: 324 RAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNPVCGGFGNPALGGG 383
           +A +G    +         A   P            P    H  L       GNPA  GG
Sbjct: 319 KAIDGPKPGKQQQHHHNPHAYNNPRYQRNDNNGYGPP--GGHGHLMA-----GNPAGMGG 378

Query: 384 MLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS----DSSSL 427
              Q + P      +G ++ A +   G      GL+   A G ++LGS G+    +  + 
Sbjct: 379 PTAQVINP-----AIGQALTALLASQG-----AGLAFNPAIGQALLGSLGTAAGVNPGNG 438

[Close]

BLAST of Cp4.1LG01g09540 vs. Swiss-Prot
Match: UBA2C_ARATH (UBP1-associated protein 2C OS=Arabidopsis thaliana GN=UBA2C PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.9e-45
Identity = 131/355 (36.90%), Postives = 187/355 (52.68%), Query Frame = 1


Query: 73  DLPKLLEPFSKTQLIELICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLT 132
           D  K++E F+  QL++L+    ++  ++   +R  AD D++ RK+F+ GL  DTT E L 
Sbjct: 33  DARKIIERFTTDQLLDLLQEAIVRHPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLR 92

Query: 133 SVFESFGEIEDCNVVLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASV 192
           S+F S+G++E+  V+LDK TGK+KGYGF+ F    GA  ALKEP KKI+ R+   QLA+ 
Sbjct: 93  SLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQLAAS 152

Query: 193 GSV-PPPQSQEVGPRKIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAI 252
           G+     Q  ++  RKIYVANV  ++ A+RL   F  +G++E GP+GFD  TGKSRG+A+
Sbjct: 153 GNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFAL 212

Query: 253 FIYRTNEGARRALEEPHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMAT 312
           F+Y+T EGA+ AL +P KV +G  L+C+ A +GK   +      Q          +    
Sbjct: 213 FVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKKGGKPGMPQAQDGG-------SGHGH 272

Query: 313 ASNLPLFAQHPSLNPVCGGFGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGS 372
                +    P+  P     G  A GG     G  P   +    SS+  G+G +GY GG 
Sbjct: 273 VHGEGMGMVRPA-GPYGAAGGISAYGG---YSGGPPAHHMNSTHSSM--GVGSAGY-GGH 332

Query: 373 YGLSQLSAGGSSMLGSYGSDSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGY 427
           YG      GG    G YG       GL   Y     G       P++  G  GGY
Sbjct: 333 YG----GYGGPGGTGVYG-------GLGGGYGGPGTGSGQYRMPPSSMPGG-GGY 361

[Close]

BLAST of Cp4.1LG01g09540 vs. Swiss-Prot
Match: UBA1A_ARATH (UBP1-associated proteins 1A OS=Arabidopsis thaliana GN=UBA1A PE=1 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 1.1e-42
Identity = 97/197 (49.24%), Postives = 137/197 (69.54%), Query Frame = 1


Query: 32  KTTKRKLVKKSDNKVDKKLK--KELDDPVSSQPHD------DASDSDLD------DLPKL 91
           K+ KRKLVK      DKK K  K+   P SS P+       D+SDS+ D      +L +L
Sbjct: 7   KSKKRKLVKSKSTNFDKKQKINKQQQQPESSTPYSSSSSSSDSSDSESDNEFDPEELREL 66

Query: 92  LEPFSKTQLIELICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFES 151
           L+P+SK QL++L+C+ +   +++ + +  AADRDVTHRKIFV+GL W+TT+ETL  VFE 
Sbjct: 67  LQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFEG 126

Query: 152 FGEIEDCNVVLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPP 211
           +GEIE+C VV+DK TGKAKG+GF++FK+R+GA +ALKEP+K+I NR A+CQLAS+G    
Sbjct: 127 YGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLASMGPAAS 186

Query: 212 PQS-QEVGPRKIYVANV 214
            +   + GP KI + ++
Sbjct: 187 GKGHDQPGPVKISMGSM 203

[Close]

BLAST of Cp4.1LG01g09540 vs. Swiss-Prot
Match: UBA1C_ARATH (UBP1-associated proteins 1C OS=Arabidopsis thaliana GN=UBA1C PE=3 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 3.1e-32
Identity = 75/163 (46.01%), Postives = 106/163 (65.03%), Query Frame = 1


Query: 29  GTSKTTKRKLVKKSDNKVDKKLKKELDDPVSSQPHDDASDSDLDDLPKLLEPFSKTQLIE 88
           G  K+  +K  K+   K  KK KK+          D   + D +D+ +LL  +SK +L+ 
Sbjct: 329 GEQKSESKKAKKQDKEKKRKKDKKQTKS-------DSDFEHDKEDIKQLLVAYSKEELVN 388

Query: 89  LICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVL 148
           LI  TA K + L + I  +ADRD+  R IFV G GWDTT+E L + FES+GEIE+C+VV+
Sbjct: 389 LIYKTAEKGSRLISAILESADRDIAQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVVM 448

Query: 149 DKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLAS 192
           DK+TG+ KGYGF++FK+R+GA +ALK P K++ NR+  C LAS
Sbjct: 449 DKDTGRGKGYGFVMFKTRKGAREALKRPEKRMYNRIVVCNLAS 484

[Close]

BLAST of Cp4.1LG01g09540 vs. TrEMBL
Match: A0A0A0KXV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G031080 PE=4 SV=1)

HSP 1 Score: 697.2 bits (1798), Expect = 1.3e-197
Identity = 361/405 (89.14%), Postives = 379/405 (93.58%), Query Frame = 1


Query: 27  MEGTSKTTKRKLVKKSDNKVDKKLKKELDDPVSSQPHDDASDSDLDDLPKLLEPFSKTQL 86
           MEGT+KT KRKLVKKS+NKVDKKLKKEL+  V SQP DD SDSD DDLPKLLEPFSKTQL
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60

Query: 87  IELICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNV 146
           IELICTTALKD NL+AQIRAAADRDVTHRKIFVHGLGWDTT+ETLTSVFESFGEIEDCNV
Sbjct: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120

Query: 147 VLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPR 206
           V+D+NTGKAKGYGFILFKSRQGA KALKEPRKKINNRM SCQLASVGSVPPPQSQEVGPR
Sbjct: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180

Query: 207 KIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEE 266
           KIYVANVHHNVDAERLR FFAKFG+LEMGPIGFDPETGKSRGYAIFIYRTNEGAR+ALEE
Sbjct: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240

Query: 267 PHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLN- 326
           PHKVFEGNKLHCQRA+EGKNKNQNSTQA +SL Q Q P+MAAMA A NL LFAQHP LN 
Sbjct: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300

Query: 327 PVCGGFGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSML 386
           PV GG+G+PALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSS+L
Sbjct: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360

Query: 387 GSYGSDSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL 431
           GSYG  SSSLKGLPHIYSSTMLGK VS+ G AA+GGSLGGYTS+L
Sbjct: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 405

[Close]

BLAST of Cp4.1LG01g09540 vs. TrEMBL
Match: F6H4P1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01290 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 7.3e-97
Identity = 214/399 (53.63%), Postives = 273/399 (68.42%), Query Frame = 1


Query: 27  MEGTSKTTKRKLVKKSDNKVDKKLK-KELDDPVSSQPHDDASDSD--LDDLPKLLEPFSK 86
           M  T K+ K+KL KK+  K++KKLK K+++  ++++P D  SDSD   D L KLLEP+SK
Sbjct: 1   MAKTKKSKKQKLTKKTPKKIEKKLKSKKVEKALATKPSDSDSDSDSGFDKLQKLLEPYSK 60

Query: 87  TQLIELICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIED 146
            QLI  I   A  D++L  +IR  ADRDV+HRKIFVHGLGWDTT+ETL + FE +G+IED
Sbjct: 61  DQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAAFEPYGQIED 120

Query: 147 CNVVLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEV 206
           CNVV D+NTGKAKGYGF+LFK+RQGA KALK+P KKINNRM   QLAS+G  PPPQSQ+ 
Sbjct: 121 CNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLASMGPSPPPQSQDT 180

Query: 207 GPRKIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRA 266
             RKIYV+NV  +VD ERLR+FFAKFGE+E GPIGFD +TGKSRG+A+F+Y+  E AR+A
Sbjct: 181 VGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGFALFVYKNQESARKA 240

Query: 267 LEEPHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQP-PMMAAMATASNLPLFAQHP 326
           LE+P+++FEG++LHCQ+A EGKNK              QP P +AA+A   N  + +QHP
Sbjct: 241 LEDPYRIFEGHQLHCQKATEGKNK-----------VPAQPQPQLAAVAATQNF-MLSQHP 300

Query: 327 SLNPVCGGF-------------GNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSG 386
           +LN +  G               NPA+ G M N GV+  SQ   VGS +G+  GL GY  
Sbjct: 301 TLNTLYSGLLAHPNASMIGAAAVNPAVAGAM-NPGVISSSQ---VGSVIGSVEGLGGY-- 360

Query: 387 GSYGLSQLSAGGSSMLGSYGSDSSSLKGLPHIYSSTMLG 409
           G++G++    G  S+LG       SL GL H Y ST LG
Sbjct: 361 GTHGVAGF-GGTPSVLG-----PPSL-GLQHAYPSTQLG 374

[Close]

BLAST of Cp4.1LG01g09540 vs. TrEMBL
Match: M5VY35_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005550mg PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.4e-92
Identity = 219/478 (45.82%), Postives = 287/478 (60.04%), Query Frame = 1


Query: 27  MEGTSKTTKRKLVKKSDNKVDKKLK---------------KELDDPVSSQPHDDA----- 86
           M   +KT KR+L+K SD  ++KK K               +E  +P   QP  D+     
Sbjct: 1   MAKITKTKKRRLIKTSDKTIEKKPKTQNPKQKFEEKEEREEEHPNPNQKQPQSDSDSGSV 60

Query: 87  -------SDSDLDDLPKLLEPFSKTQLIELICTTALKDANLEAQIRAAADRDVTHRKIFV 146
                  S+SD+++LP+LL+ ++K QLIELI   A KD+ L  +IR AAD DV+HRKIF+
Sbjct: 61  SDSDSDSSESDVENLPELLQAYTKDQLIELIVEAASKDSALFNRIRDAADGDVSHRKIFI 120

Query: 147 HGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTGKAKGYGFILFKSRQGATKALKEPRKK 206
           HGLGWDTT+ETL + FE FGEIE+CN+VLDK TGKAKGYGF+LFK+R+GA KALK P+K 
Sbjct: 121 HGLGWDTTRETLVAAFEPFGEIEECNLVLDKATGKAKGYGFVLFKTRRGAAKALKNPKKN 180

Query: 207 INNRMASCQLASVG---------SVPPPQSQEVGPRKIYVANVHHNVDAERLRTFFAKFG 266
           I+NR+ASCQLASVG         S       +   RKIYV++V H+VD E+LR FFAKFG
Sbjct: 181 ISNRIASCQLASVGPANNNTTTSSSSFNAQSDSASRKIYVSSVPHDVDGEKLRIFFAKFG 240

Query: 267 ELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKVFEGNKLHCQRAAEGKNKNQN 326
           E+E GP+GFD +TGK +G+A+F+Y+T               EG++L CQ+AAEG +KN+N
Sbjct: 241 EIETGPMGFDSQTGKCKGFALFLYKT--------------VEGHQLQCQKAAEG-SKNKN 300

Query: 327 STQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNPVCGGFG------------------ 386
           S  A     Q Q P +AA+A A N+ LF QHP+LNP+ GG                    
Sbjct: 301 SAVAPPQ-GQMQQPTLAAVAAAQNMALFGQHPNLNPLYGGLMGNVGGGFVPGSANPGMVA 360

Query: 387 ---NPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAG--------- 431
              NP + GG LN  V+P+SQVG VG+ VG      GYSGGS+GL  L  G         
Sbjct: 361 RALNPGIMGGALNPSVIPVSQVGQVGAGVG------GYSGGSHGLVNLGGGSHGLVSLGG 420

[Close]

BLAST of Cp4.1LG01g09540 vs. TrEMBL
Match: A0A067KSI9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09364 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.7e-91
Identity = 201/382 (52.62%), Postives = 248/382 (64.92%), Query Frame = 1


Query: 55  DDPVSSQPHDDASDSDLDDLPKLLEPFSKTQLIELICTTALKDANLEAQIRAAADRDVTH 114
           D   SS  H    DSD  D+P LLEP++K QLIELI   A  + ++   I   ADRD +H
Sbjct: 63  DSDSSSNSH---FDSDPVDIPTLLEPYTKEQLIELISIAATNNPSIYPLINEHADRDASH 122

Query: 115 RKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTGKAKGYGFILFKSRQGATKALK 174
           RKIFVHG  WDTT+E + S FE FGEIE+CNVV DK TGKAKGYGF+LFK+R+GA  ALK
Sbjct: 123 RKIFVHGFTWDTTRENVLSAFEPFGEIEECNVVTDKVTGKAKGYGFVLFKTRKGAAMALK 182

Query: 175 EPRKKINNRMASCQLASVG-SVPPPQSQEVGPRKIYVANVHHNVDAERLRTFFAKFGELE 234
           +P+K INNR ASCQLAS+G +    + QEVG RKIYV+NV  N D E+L+ F AKFGE+E
Sbjct: 183 DPKKNINNRFASCQLASIGPAANVGKDQEVGARKIYVSNVQVNADKEKLKAFLAKFGEIE 242

Query: 235 MGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKVFEGNKLHCQRAAEGKNK-NQNST 294
            GPIGFD ETG+SRGYA+F+Y+T EGA+RALEEPHK+FEG +LHC  A EGKNK NQ   
Sbjct: 243 SGPIGFDKETGRSRGYALFVYKTVEGAKRALEEPHKMFEGQQLHCSIATEGKNKTNQVQM 302

Query: 295 QAVQSL-AQTQPPMMAAMATASNLPLFAQHPSLNPVCGG-FGNPALG--GGMLNQGVVPM 354
           Q  Q +  Q+Q  M+AA+A A NL LF Q P +NPV GG   NPA     GM+N  +V  
Sbjct: 303 QQQQQVKQQSQDQMLAAVAAAQNLALFGQQPGINPVYGGLLSNPAAAAPAGMINPLMVGA 362

Query: 355 SQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGSDSSSLKGLPHIYSSTMLG 414
               LV +S   G+GL+                 S+LG+YG+     +GL H+YS+T  G
Sbjct: 363 VSQSLVPTSQIGGLGLA---------------TQSVLGTYGAG----RGLQHVYSNTQTG 421

Query: 415 KAVSDRGPAASGGSLGGYTSYL 431
           +    RG    G S  GY  Y+
Sbjct: 423 QGGVGRGQGL-GSSFAGYPPYM 421

[Close]

BLAST of Cp4.1LG01g09540 vs. TrEMBL
Match: A5BLC5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028295 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.3e-88
Identity = 211/421 (50.12%), Postives = 266/421 (63.18%), Query Frame = 1


Query: 27  MEGTSKTTKRKLVKKSDNKVDKKLK-KELDDPVSSQPHDDASDSD--LDDLPKLLEPFSK 86
           M  T K+ K+KL KK+  K++KKLK K+++  ++++P D  SDSD   D L KLLEP+SK
Sbjct: 1   MAKTKKSKKQKLTKKTPKKIEKKLKSKKVEKALATKPSDSDSDSDSGFDKLQKLLEPYSK 60

Query: 87  TQLIELICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIED 146
            QLI  I   A  D++L  +IR  ADRDV+HRKIFVHGLGWDTT+ETL + FE +G+IED
Sbjct: 61  DQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAAFEPYGQIED 120

Query: 147 CNVVLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEV 206
           CNVV D+NTGKAKGYGF+LFK+RQGA KALK+P KKINNRM   QLAS+G  PPPQSQ+ 
Sbjct: 121 CNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLASMGPSPPPQSQDT 180

Query: 207 GPRKIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRA 266
             RKIYV+NV  +VD ERLR+FFAKFGE+E GPIGFD +TGKSRG               
Sbjct: 181 VGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRG--------------- 240

Query: 267 LEEPHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQP-PMMAAMATASNLPLFAQHP 326
                 +FEG++LHCQ+A EGKNK              QP P +AA+A   N  + +QHP
Sbjct: 241 ------IFEGHQLHCQKATEGKNK-----------VPAQPQPQLAAVAATQNF-MLSQHP 300

Query: 327 SLNPVCGGF-------------GNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSG 386
           +LN +  G               NPA+ G M N GV+  SQ   VGS +G+  GL GY  
Sbjct: 301 TLNTLYSGLLAHPNASMIGAAAVNPAVAGAM-NPGVISSSQ---VGSVIGSVEGLGGY-- 360

Query: 387 GSYGLSQLSAGGSSMLGSYGSDSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSY 431
           G++G++    G  S+LG       SL GL H Y ST LG++   R      G+ GGY SY
Sbjct: 361 GTHGVAGF-GGTPSVLG-----PPSL-GLQHAYPSTQLGQSSVGRVQGTGVGTFGGYPSY 375

[Close]

BLAST of Cp4.1LG01g09540 vs. TAIR10
Match: AT2G41060.1 (AT2G41060.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 228.8 bits (582), Expect = 6.4e-60
Identity = 153/401 (38.15%), Postives = 220/401 (54.86%), Query Frame = 1


Query: 37  KLVKKSDNKVDKKLKKELDDPVSSQPHDDASDSDLDDLPKLLEPFSKTQLIELICTTALK 96
           K + + + K +  ++ E      +Q ++D  D + + +  LLEPFSK QL+ L+   A +
Sbjct: 52  KEMHEEEAKGEDNIEAETSSGSGNQGNED--DDEEEPIEDLLEPFSKDQLLILLKEAAER 111

Query: 97  DANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTGKAK 156
             ++  +IR  AD D+ HRKIFVHGLGWDT  ++L   F+ +GEIEDC  V+DK +G++K
Sbjct: 112 HRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSK 171

Query: 157 GYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGS------VPPPQ--SQEVGPRKI 216
           GYGFILFKSR GA  ALK+P+KKI  RM +CQLAS+G       V P Q  + E   RKI
Sbjct: 172 GYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQGNPVVAPAQHFNPENVQRKI 231

Query: 217 YVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPH 276
           YV+NV  ++D ++L  FF++FGE+E GP+G D  TG+ +G+A+F+YR+ E A++ALEEPH
Sbjct: 232 YVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAKKALEEPH 291

Query: 277 KVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNPVC 336
           K FEG+ LHC +A +G  + +       S  Q             N        +     
Sbjct: 292 KTFEGHVLHCHKANDGPKQVKQHQHNHNSHNQ-------------NSRYQRNDNNGYGAP 351

Query: 337 GGFGNPALGGGMLNQGVVPMSQVGLVG--SSVGAGIGLSGYSGGSYGLSQLSAGGSSMLG 396
           GG G+   G     Q   P     L    +S GAG+GL+             A G ++LG
Sbjct: 352 GGHGHFIAGNNQAVQAFNPAIGQALTALLASQGAGLGLN------------QAFGQALLG 411

Query: 397 SYGSDS-SSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGY 427
           + G+ S  ++ G+P  Y +          G  A  G  GGY
Sbjct: 412 TLGTASPGAVGGMPSGYGTQANISPGVYPGYGAQAGYQGGY 425

[Close]

BLAST of Cp4.1LG01g09540 vs. TAIR10
Match: AT3G56860.3 (AT3G56860.3 UBP1-associated protein 2A)

HSP 1 Score: 224.2 bits (570), Expect = 1.6e-58
Identity = 164/451 (36.36%), Postives = 231/451 (51.22%), Query Frame = 1


Query: 24  SSPMEGTSKTTKRKLVKKSDNKVD------KKLKKELDDPVSSQPHDDASDS-------- 83
           S  ++ T +  ++ ++K  DN+ D      +++++E ++ V     +D  D         
Sbjct: 19  SQKLKQTPEEEQQLVIKNQDNQGDVEEVEYEEVEEEQEEEVEDDDDEDDGDENEDQTDGN 78

Query: 84  --------------DLDDLP--KLLEPFSKTQLIELICTTALKDANLEAQIRAAADRDVT 143
                         D DD P   LLEPFSK Q++ L+   A K  ++  +IR  AD D  
Sbjct: 79  RIEAAATSGSGNQEDDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPV 138

Query: 144 HRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTGKAKGYGFILFKSRQGATKAL 203
           HRKIFVHGLGWDT  ETL   F+ +GEIEDC  V DK +GK+KGYGFIL+KSR GA  AL
Sbjct: 139 HRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNAL 198

Query: 204 KEPRKKINNRMASCQLASVGSV------------PPPQ--SQEVGPRKIYVANVHHNVDA 263
           K+P+KKI +RM +CQLAS G V             P Q  + E   +KIYV+NV   +D 
Sbjct: 199 KQPQKKIGSRMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDP 258

Query: 264 ERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKVFEGNKLHCQ 323
           ++L  FF+KFGE+E GP+G D  TG+ +G+ +F+Y+++E A+RALEEPHK FEG+ LHCQ
Sbjct: 259 QKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQ 318

Query: 324 RAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNPVCGGFGNPALGGG 383
           +A +G    +         A   P            P    H  L       GNPA  GG
Sbjct: 319 KAIDGPKPGKQQQHHHNPHAYNNPRYQRNDNNGYGPP--GGHGHLMA-----GNPAGMGG 378

Query: 384 MLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS----DSSSL 427
              Q + P      +G ++ A +   G      GL+   A G ++LGS G+    +  + 
Sbjct: 379 PTAQVINP-----AIGQALTALLASQG-----AGLAFNPAIGQALLGSLGTAAGVNPGNG 438

[Close]

BLAST of Cp4.1LG01g09540 vs. TAIR10
Match: AT3G15010.1 (AT3G15010.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 184.9 bits (468), Expect = 1.1e-46
Identity = 131/355 (36.90%), Postives = 187/355 (52.68%), Query Frame = 1


Query: 73  DLPKLLEPFSKTQLIELICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLT 132
           D  K++E F+  QL++L+    ++  ++   +R  AD D++ RK+F+ GL  DTT E L 
Sbjct: 33  DARKIIERFTTDQLLDLLQEAIVRHPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLR 92

Query: 133 SVFESFGEIEDCNVVLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASV 192
           S+F S+G++E+  V+LDK TGK+KGYGF+ F    GA  ALKEP KKI+ R+   QLA+ 
Sbjct: 93  SLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQLAAS 152

Query: 193 GSV-PPPQSQEVGPRKIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAI 252
           G+     Q  ++  RKIYVANV  ++ A+RL   F  +G++E GP+GFD  TGKSRG+A+
Sbjct: 153 GNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFAL 212

Query: 253 FIYRTNEGARRALEEPHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMAT 312
           F+Y+T EGA+ AL +P KV +G  L+C+ A +GK   +      Q          +    
Sbjct: 213 FVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKKGGKPGMPQAQDGG-------SGHGH 272

Query: 313 ASNLPLFAQHPSLNPVCGGFGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGS 372
                +    P+  P     G  A GG     G  P   +    SS+  G+G +GY GG 
Sbjct: 273 VHGEGMGMVRPA-GPYGAAGGISAYGG---YSGGPPAHHMNSTHSSM--GVGSAGY-GGH 332

Query: 373 YGLSQLSAGGSSMLGSYGSDSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGY 427
           YG      GG    G YG       GL   Y     G       P++  G  GGY
Sbjct: 333 YG----GYGGPGGTGVYG-------GLGGGYGGPGTGSGQYRMPPSSMPGG-GGY 361

[Close]

BLAST of Cp4.1LG01g09540 vs. TAIR10
Match: AT2G22090.2 (AT2G22090.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 175.6 bits (444), Expect = 6.4e-44
Identity = 97/197 (49.24%), Postives = 137/197 (69.54%), Query Frame = 1


Query: 32  KTTKRKLVKKSDNKVDKKLK--KELDDPVSSQPHD------DASDSDLD------DLPKL 91
           K+ KRKLVK      DKK K  K+   P SS P+       D+SDS+ D      +L +L
Sbjct: 7   KSKKRKLVKSKSTNFDKKQKINKQQQQPESSTPYSSSSSSSDSSDSESDNEFDPEELREL 66

Query: 92  LEPFSKTQLIELICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFES 151
           L+P+SK QL++L+C+ +   +++ + +  AADRDVTHRKIFV+GL W+TT+ETL  VFE 
Sbjct: 67  LQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFEG 126

Query: 152 FGEIEDCNVVLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPP 211
           +GEIE+C VV+DK TGKAKG+GF++FK+R+GA +ALKEP+K+I NR A+CQLAS+G    
Sbjct: 127 YGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLASMGPAAS 186

Query: 212 PQS-QEVGPRKIYVANV 214
            +   + GP KI + ++
Sbjct: 187 GKGHDQPGPVKISMGSM 203

[Close]

BLAST of Cp4.1LG01g09540 vs. TAIR10
Match: AT2G19380.1 (AT2G19380.1 RNA recognition motif (RRM)-containing protein)

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-33
Identity = 75/163 (46.01%), Postives = 106/163 (65.03%), Query Frame = 1


Query: 29  GTSKTTKRKLVKKSDNKVDKKLKKELDDPVSSQPHDDASDSDLDDLPKLLEPFSKTQLIE 88
           G  K+  +K  K+   K  KK KK+          D   + D +D+ +LL  +SK +L+ 
Sbjct: 329 GEQKSESKKAKKQDKEKKRKKDKKQTKS-------DSDFEHDKEDIKQLLVAYSKEELVN 388

Query: 89  LICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVL 148
           LI  TA K + L + I  +ADRD+  R IFV G GWDTT+E L + FES+GEIE+C+VV+
Sbjct: 389 LIYKTAEKGSRLISAILESADRDIAQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVVM 448

Query: 149 DKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLAS 192
           DK+TG+ KGYGF++FK+R+GA +ALK P K++ NR+  C LAS
Sbjct: 449 DKDTGRGKGYGFVMFKTRKGAREALKRPEKRMYNRIVVCNLAS 484

[Close]

BLAST of Cp4.1LG01g09540 vs. NCBI nr
Match: gi|449462878|ref|XP_004149162.1| (PREDICTED: UBP1-associated protein 2B-like isoform X3 [Cucumis sativus])

HSP 1 Score: 697.2 bits (1798), Expect = 1.8e-197
Identity = 361/405 (89.14%), Postives = 379/405 (93.58%), Query Frame = 1


Query: 27  MEGTSKTTKRKLVKKSDNKVDKKLKKELDDPVSSQPHDDASDSDLDDLPKLLEPFSKTQL 86
           MEGT+KT KRKLVKKS+NKVDKKLKKEL+  V SQP DD SDSD DDLPKLLEPFSKTQL
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60

Query: 87  IELICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNV 146
           IELICTTALKD NL+AQIRAAADRDVTHRKIFVHGLGWDTT+ETLTSVFESFGEIEDCNV
Sbjct: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120

Query: 147 VLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPR 206
           V+D+NTGKAKGYGFILFKSRQGA KALKEPRKKINNRM SCQLASVGSVPPPQSQEVGPR
Sbjct: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180

Query: 207 KIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEE 266
           KIYVANVHHNVDAERLR FFAKFG+LEMGPIGFDPETGKSRGYAIFIYRTNEGAR+ALEE
Sbjct: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240

Query: 267 PHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLN- 326
           PHKVFEGNKLHCQRA+EGKNKNQNSTQA +SL Q Q P+MAAMA A NL LFAQHP LN 
Sbjct: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300

Query: 327 PVCGGFGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSML 386
           PV GG+G+PALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSS+L
Sbjct: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360

Query: 387 GSYGSDSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL 431
           GSYG  SSSLKGLPHIYSSTMLGK VS+ G AA+GGSLGGYTS+L
Sbjct: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 405

[Close]

BLAST of Cp4.1LG01g09540 vs. NCBI nr
Match: gi|778690498|ref|XP_011653132.1| (PREDICTED: UBP1-associated protein 2B-like isoform X2 [Cucumis sativus])

HSP 1 Score: 697.2 bits (1798), Expect = 1.8e-197
Identity = 361/405 (89.14%), Postives = 379/405 (93.58%), Query Frame = 1


Query: 27  MEGTSKTTKRKLVKKSDNKVDKKLKKELDDPVSSQPHDDASDSDLDDLPKLLEPFSKTQL 86
           MEGT+KT KRKLVKKS+NKVDKKLKKEL+  V SQP DD SDSD DDLPKLLEPFSKTQL
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60

Query: 87  IELICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNV 146
           IELICTTALKD NL+AQIRAAADRDVTHRKIFVHGLGWDTT+ETLTSVFESFGEIEDCNV
Sbjct: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120

Query: 147 VLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPR 206
           V+D+NTGKAKGYGFILFKSRQGA KALKEPRKKINNRM SCQLASVGSVPPPQSQEVGPR
Sbjct: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180

Query: 207 KIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEE 266
           KIYVANVHHNVDAERLR FFAKFG+LEMGPIGFDPETGKSRGYAIFIYRTNEGAR+ALEE
Sbjct: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240

Query: 267 PHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLN- 326
           PHKVFEGNKLHCQRA+EGKNKNQNSTQA +SL Q Q P+MAAMA A NL LFAQHP LN 
Sbjct: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300

Query: 327 PVCGGFGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSML 386
           PV GG+G+PALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSS+L
Sbjct: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360

Query: 387 GSYGSDSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL 431
           GSYG  SSSLKGLPHIYSSTMLGK VS+ G AA+GGSLGGYTS+L
Sbjct: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 405

[Close]

BLAST of Cp4.1LG01g09540 vs. NCBI nr
Match: gi|700198079|gb|KGN53237.1| (hypothetical protein Csa_4G031080 [Cucumis sativus])

HSP 1 Score: 697.2 bits (1798), Expect = 1.8e-197
Identity = 361/405 (89.14%), Postives = 379/405 (93.58%), Query Frame = 1


Query: 27  MEGTSKTTKRKLVKKSDNKVDKKLKKELDDPVSSQPHDDASDSDLDDLPKLLEPFSKTQL 86
           MEGT+KT KRKLVKKS+NKVDKKLKKEL+  V SQP DD SDSD DDLPKLLEPFSKTQL
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60

Query: 87  IELICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNV 146
           IELICTTALKD NL+AQIRAAADRDVTHRKIFVHGLGWDTT+ETLTSVFESFGEIEDCNV
Sbjct: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120

Query: 147 VLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPR 206
           V+D+NTGKAKGYGFILFKSRQGA KALKEPRKKINNRM SCQLASVGSVPPPQSQEVGPR
Sbjct: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180

Query: 207 KIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEE 266
           KIYVANVHHNVDAERLR FFAKFG+LEMGPIGFDPETGKSRGYAIFIYRTNEGAR+ALEE
Sbjct: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240

Query: 267 PHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLN- 326
           PHKVFEGNKLHCQRA+EGKNKNQNSTQA +SL Q Q P+MAAMA A NL LFAQHP LN 
Sbjct: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300

Query: 327 PVCGGFGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSML 386
           PV GG+G+PALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSS+L
Sbjct: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360

Query: 387 GSYGSDSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL 431
           GSYG  SSSLKGLPHIYSSTMLGK VS+ G AA+GGSLGGYTS+L
Sbjct: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 405

[Close]

BLAST of Cp4.1LG01g09540 vs. NCBI nr
Match: gi|778690495|ref|XP_011653131.1| (PREDICTED: UBP1-associated protein 2B-like isoform X1 [Cucumis sativus])

HSP 1 Score: 697.2 bits (1798), Expect = 1.8e-197
Identity = 361/405 (89.14%), Postives = 379/405 (93.58%), Query Frame = 1


Query: 27  MEGTSKTTKRKLVKKSDNKVDKKLKKELDDPVSSQPHDDASDSDLDDLPKLLEPFSKTQL 86
           MEGT+KT KRKLVKKS+NKVDKKLKKEL+  V SQP DD SDSD DDLPKLLEPFSKTQL
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60

Query: 87  IELICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNV 146
           IELICTTALKD NL+AQIRAAADRDVTHRKIFVHGLGWDTT+ETLTSVFESFGEIEDCNV
Sbjct: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120

Query: 147 VLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPR 206
           V+D+NTGKAKGYGFILFKSRQGA KALKEPRKKINNRM SCQLASVGSVPPPQSQEVGPR
Sbjct: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180

Query: 207 KIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEE 266
           KIYVANVHHNVDAERLR FFAKFG+LEMGPIGFDPETGKSRGYAIFIYRTNEGAR+ALEE
Sbjct: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240

Query: 267 PHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLN- 326
           PHKVFEGNKLHCQRA+EGKNKNQNSTQA +SL Q Q P+MAAMA A NL LFAQHP LN 
Sbjct: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300

Query: 327 PVCGGFGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSML 386
           PV GG+G+PALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSS+L
Sbjct: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360

Query: 387 GSYGSDSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL 431
           GSYG  SSSLKGLPHIYSSTMLGK VS+ G AA+GGSLGGYTS+L
Sbjct: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 405

[Close]

BLAST of Cp4.1LG01g09540 vs. NCBI nr
Match: gi|659107614|ref|XP_008453765.1| (PREDICTED: UBP1-associated protein 2B-like [Cucumis melo])

HSP 1 Score: 614.0 bits (1582), Expect = 2.0e-172
Identity = 312/344 (90.70%), Postives = 325/344 (94.48%), Query Frame = 1


Query: 27  MEGTSKTTKRKLVKKSDNKVDKKLKKELDDPVSSQPHDDASDSDLDDLPKLLEPFSKTQL 86
           MEGT+KT KRKLVKKS+NKVDKKLKKEL+D V SQP DD SDSD DDLPKLLEPFSKTQL
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEDNVQSQPLDDVSDSDFDDLPKLLEPFSKTQL 60

Query: 87  IELICTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNV 146
           IELICTTALKD NL+AQIRAAADRDVTHRKIFVHGLGWDTT+ETLTSVFESFGEIEDCNV
Sbjct: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120

Query: 147 VLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPR 206
           V+D+NTGKAKGYGF+LFKSRQGA KALKEPRKKINNRM SCQLASVGSVPPPQSQEVGPR
Sbjct: 121 VMDRNTGKAKGYGFVLFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180

Query: 207 KIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEE 266
           KIYVANVHHNVDAERLR FFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGAR+ALEE
Sbjct: 181 KIYVANVHHNVDAERLRAFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240

Query: 267 PHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNP 326
           PHKVFEGNKLHCQRA+EGKNKNQNSTQA QSL Q Q P+MAAMA A NL LFAQHP LNP
Sbjct: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAQSLGQNQTPVMAAMAAAPNLQLFAQHPGLNP 300

Query: 327 VCGGFGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGG 371
           V GG+G+PALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGG
Sbjct: 301 VYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGG 344

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g09540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UBA2B_ARATH	1.1e-58	38.15	UBP1-associated protein 2B OS=Arabidopsis thaliana GN=UBA2B PE=2 SV=1	[more]
UBA2A_ARATH	2.8e-57	36.36	UBP1-associated protein 2A OS=Arabidopsis thaliana GN=UBA2A PE=1 SV=1	[more]
UBA2C_ARATH	1.9e-45	36.90	UBP1-associated protein 2C OS=Arabidopsis thaliana GN=UBA2C PE=2 SV=1	[more]
UBA1A_ARATH	1.1e-42	49.24	UBP1-associated proteins 1A OS=Arabidopsis thaliana GN=UBA1A PE=1 SV=2	[more]
UBA1C_ARATH	3.1e-32	46.01	UBP1-associated proteins 1C OS=Arabidopsis thaliana GN=UBA1C PE=3 SV=2	[more]

BLAST of Cp4.1LG01g09540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXV0_CUCSA	1.3e-197	89.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G031080 PE=4 SV=1	[more]
F6H4P1_VITVI	7.3e-97	53.63	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01290 PE=4 SV=...	[more]
M5VY35_PRUPE	1.4e-92	45.82	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005550mg PE=4 SV=1	[more]
A0A067KSI9_JATCU	2.7e-91	52.62	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09364 PE=4 SV=1	[more]
A5BLC5_VITVI	1.3e-88	50.12	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028295 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g09540 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41060.1	6.4e-60	38.15	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G56860.3	1.6e-58	36.36	UBP1-associated protein 2A	[more]
AT3G15010.1	1.1e-46	36.90	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G22090.2	6.4e-44	49.24	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G19380.1	1.8e-33	46.01	RNA recognition motif (RRM)-containing protein	[more]

BLAST of Cp4.1LG01g09540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462878\|ref\|XP_004149162.1\|	1.8e-197	89.14	PREDICTED: UBP1-associated protein 2B-like isoform X3 [Cucumis sativus]	[more]
gi\|778690498\|ref\|XP_011653132.1\|	1.8e-197	89.14	PREDICTED: UBP1-associated protein 2B-like isoform X2 [Cucumis sativus]	[more]
gi\|700198079\|gb\|KGN53237.1\|	1.8e-197	89.14	hypothetical protein Csa_4G031080 [Cucumis sativus]	[more]
gi\|778690495\|ref\|XP_011653131.1\|	1.8e-197	89.14	PREDICTED: UBP1-associated protein 2B-like isoform X1 [Cucumis sativus]	[more]
gi\|659107614\|ref\|XP_008453765.1\|	2.0e-172	90.70	PREDICTED: UBP1-associated protein 2B-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g09540.1	Cp4.1LG01g09540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 117..183 score: 2.3E-16coord: 208..277 score: 4.1
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 207..279 score: 1.4E-14coord: 116..188 score: 1.6
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 115..215 score: 15.852coord: 206..283 score: 13
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 200..288 score: 3.1E-16coord: 114..190 score: 7.4
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 114..283 score: 4.82
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 88..288 score: 2.3E-82coord: 315..348 score: 2.3E-82coord: 420..432 score: 2.3
None	No IPR available	PANTHER	PTHR24012:SF397	OLIGOURIDYLATE-BINDING PROTEIN 1A-RELATED	coord: 88..288 score: 2.3E-82coord: 315..348 score: 2.3E-82coord: 420..432 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g09540	Cucsa.029400	Cucumber (Gy14) v1	cgycpeB0001
Cp4.1LG01g09540	CmaCh16G006710	Cucurbita maxima (Rimu)	cmacpeB350
Cp4.1LG01g09540	CmoCh04G008510	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g09540	CmoCh16G007320	Cucurbita moschata (Rifu)	cmocpeB312
Cp4.1LG01g09540	Cla014500	Watermelon (97103) v1	cpewmB406
Cp4.1LG01g09540	Csa4G031080	Cucumber (Chinese Long) v2	cpecuB407
Cp4.1LG01g09540	MELO3C017573	Melon (DHL92) v3.5.1	cpemeB416
Cp4.1LG01g09540	ClCG07G009360	Watermelon (Charleston Gray)	cpewcgB404
Cp4.1LG01g09540	CSPI04G04810	Wild cucumber (PI 183967)	cpecpiB406
Cp4.1LG01g09540	Lsi07G001850	Bottle gourd (USVL1VR-Ls)	cpelsiB377
Cp4.1LG01g09540	MELO3C017573.2	Melon (DHL92) v3.6.1	cpemedB487
Cp4.1LG01g09540	CsaV3_UNG186420	Cucumber (Chinese Long) v3	cpecucB0564
Cp4.1LG01g09540	CsaV3_4G004880	Cucumber (Chinese Long) v3	cpecucB0504
Cp4.1LG01g09540	Bhi01G001914	Wax gourd	cpewgoB0511
Cp4.1LG01g09540	CsGy4G004720	Cucumber (Gy14) v2	cgybcpeB509
Cp4.1LG01g09540	Carg05786	Silver-seed gourd	carcpeB1417
Cp4.1LG01g09540	Carg14191	Silver-seed gourd	carcpeB1302

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g09540	Cp4.1LG14g01480	Cucurbita pepo (Zucchini)	cpecpeB233

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g09540	Cucurbita pepo (Zucchini)	cpecpeB073
Cp4.1LG01g09540	Cucurbita pepo (Zucchini)	cpecpeB385
Cp4.1LG01g09540	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g09540	Cucurbita maxima (Rimu)	cmacpeB876
Cp4.1LG01g09540	Cucurbita moschata (Rifu)	cmocpeB613
Cp4.1LG01g09540	Cucurbita moschata (Rifu)	cmocpeB813
Cp4.1LG01g09540	Wild cucumber (PI 183967)	cpecpiB403
Cp4.1LG01g09540	Wild cucumber (PI 183967)	cpecpiB468
Cp4.1LG01g09540	Cucumber (Chinese Long) v2	cpecuB405
Cp4.1LG01g09540	Bottle gourd (USVL1VR-Ls)	cpelsiB375
Cp4.1LG01g09540	Watermelon (Charleston Gray)	cpewcgB374
Cp4.1LG01g09540	Watermelon (97103) v1	cpewmB443
Cp4.1LG01g09540	Melon (DHL92) v3.5.1	cpemeB432
Cp4.1LG01g09540	Melon (DHL92) v3.5.1	cpemeB434