Carg14191 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14191
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RNA-binding protein
Location	Cucurbita_argyrosperma_scaffold_045 : 506675 .. 510929 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGCCTCGACGCAAAATTTTGATTCGTCTTCTCAAAGAGTTGGTTCTGTTCAATTGAAGGGATGCACCACTGCTCTCAAAGACGCTAATCTCGAAGCCCAAATTCGAGCTGCTGCCGACCGTGATGTCACGCACCGCAAGATTTTCGTCCATGGCCTCGGTTGGGACACCACCAAAGAAACCCTAACTTCGGTTTTTGAATCATTTGGTGAAATTGAAGACTGCAATGTGGTTTTGGATAAGAATACAGGGAAGGCTAAGGGCTACGGGTTTATTTTGTTCAAATCCCGTCAGGGTGCGACTAAAGCGTTGAAGGAACCTAGGAAGAAGATTAATAACAGGATGGCTTCGTGTCAATTGGCTTCTGTGGGTTCAGTGCCGCCGCCTCAAAGTCAGGAGGTTGGGCCGCGGAAGATTTATGTGGCGAATGTGCACCATAACGTGGATGCTGAGAGGCTTAGGACGTTCTTTGCGAAGTTTGGGGAATTGGAGATGGGTCCGATTGGGTTCGATCCCGAAACAGGGAAATCGAGGGGTTATGCTATTTTTATTTACAGAACGAATGAAGGTGCGAGGAGGGCTCTTGAGGAGCCACACAAAGTATTCGAAGGGAACAAATTGCATTGCCAGAGGGCGGCTGAGGGGAAGAACAAGAATCAGAATTCGACGCAGGCAGTGCAAAGCTTGGCGCAGACTCAGCCGCCGATGATGGCGGCCATGGCTACAGCTTCAAATTTGCCATTGTTTGCTCAACATCCGAGCCTCAATTCTGTGTGCGGTGGATTTGGGAACCCAGCTTTGGGAGGTGGAATGTTGAACCAGGGAGTAGTTCCCATGAGTCAAGTGGGTCTGGTTGGTAGTTCAGTTGGGGCTGGGATAGGCTTGAGTGGTTACAGTGGGGGTTCATATGGCTTAAGCCAATTAAGTGCCGGTGGTTCGTCAATGCTAGGCTCTTACGGGTCCGATTCTTCATCACTGAAGGGGTTGCCGCACATTTATTCGAGCACAATGCTTGGCAAGGCCGTATCGGATCGGGGTCCGGCGGCTTCTGGTGGGTCTCTCGGAGGATACACATCATATTTATGGTATGAGATGTTTCTTATTCTTTTTACTTGCCGCACTTTAAGCCTTCCATTTATCCATTCGTGCTTAGCATTAATTATAGTGACAGGTAGAATGTATTAATAATTAATGGGTGCTATTAGTACTGGCATCATCAGCAGCCTGTGTGTATAATTATTATTTAGGTAATTGGTCCGTATAATCCCTAAGGCTACCACTAGTTTGTAATTTTAAGAGTTTCTAATTATTGTATACCTCTTAGTAATAAGGTGGTTAAAGATGCCCTTCTCGGAAGGTAGTCAGGAACACTGGCCAAGACAACTCTATTTAATACTCCCAACGTCTTGTCGATCTATATTTAGGATGCCTTGTAGAGTCGTGAGAGTGAAGTGGGCGAAAAAGAATTATAGACTTCTTTGGAAAGATTGAGGTAAGAAAGGAGAGTTATAAATTGCATCTAGTGAACTAGAGGAGAATGGCCTTGTCTCTGTGGTATGCAAGAGGTTCTAGGAGAGGTAATATCTACAGGGTGTAGGTTGATGCGACTCCAATTAGAGTTCAAATTTATGCCCAACGGGCCTATCAATTTGAGAAAAACGAGGTCGAAATCGACTTGTTGTAAAACCAAACTGTCTGCTTGACCAAAAAGCATCCCCAATGGACTACCGAGCGTACAAGAATCTAATCAAATTTGACCAAATCAACCCAAATTCTAATACCAAACTAATTTTTCTGGTTATGAAATTGTACCCGCCAATCAATTTACTTGCTTTGGTTGGCTCTTTTAGTTTCATTTTGGCCGCATAGTTACCGTAAAAAAAGGGTATAGAAAAGTATTTATGTGTTTTAGATACTTTTAGGCTTTTCTTGTTGGCATGCAACAAAGGAGCAGATATTCGCTTAAAAGCTGATTTCATGGCAGTTGAGGTGAGGTCTAAGTAAATTCACAATGAAGCTTGCTGACATCTTTAATAGGTATAAAAGCAATACTATTTAGAGCTACTTTAGTAATTTGCATGGAGCTCATCAGGCATCTATTTGTGTCGAGGGTCTTAGACTGGATGCTTACATAGCCAACATAGGGATCTGGCTCACAATTCATTTTCAACACCAAAGCAATTAAGATTAACAAGTCCTGGAGTTTTTTTATTCATGATAGTTCAACTAATTCGTGATAGAGCCCTCTATAGTTACTATATTAATAGGGTGAAGGCTTTTTAAATCCTTAAAGATGTCAAGAGTGTTTCGACAAAGGTATCCTAGCTAGTGAATTACCTTTTTCCTGCGATATGTGCCAAAACATCTTGGGATAGTTGTTTCTTTTGGTTGTATCTTGGGTGTTGATGTTTGAATTAGAGATCACTGACAAATTATCCGTTCCTATACTCTTCCTATCTTGGGGGAGAGGAACGGATATTTCAAGATAGGAAGAGTATAGGGAGGAGGTTCAAAGGGGGCTCACATTATTGACTCTCCCTTGTATTTCTTCTAATAAGTTTTTCAGTGATTTTCCTACTTTTTTGTTTAATGTATTTCTATTATCAACAGTCGGAGCTCTTTTTTCCAGGTGTGGTTATGACGGCCCCTTTTTGATTGGCTTGACCTTGTTCGTCCTTTCCTTTCTCCAACTTTTAATGATAGCTCCACTTTAACTTCACCCCGCCCAAACCTAAAATAAGAAAGAAAGTTCTTCCGCGGGCCACAATTGTATTTAGCTTTCTGTTCTAATTTGATTTATATCTTGTTTTCATTTATTTTCCTTCAGATTTTTCCTGGTCTTCCGATAATTTGAAAAGTGATATTTTATTGTAAATTTTCGTTCTTTTTGACTTCTTCATCAAAAGTTTATTTTATTATTAATAATAATAATAATATTATTATTGTATTTCCTTGTGATCACGAATTCTTAAATCAATCCTAGGTGTTGTTTTTCTTTTAATTTTGAGCCTACTTGGTTTGGTCTTCATCTTTTTTAAGTATTACTTTAGGATTACTTTAAACACACTTAATTAAAATGGTTTTTATGCTGCCCTTTGATGATCTTTTCCTTTTCTTCTTTTTTCCCCCTTGCTATGCTTCTTCTGATTGTATCTATTTGGGAAACTGCTGATTTTGTTGTATTTCAGTTATTAGTAATATTGTGGATGTATTTTTGGTTTCTAATATTTTCTTCTCTTTTTTTTTCTTTCGGATTTCTTGGTTTCATTTTTCTTATTCAAATCTTCAACTTCATTGTTTTGATGGGAGTCTTCATTTGACAGGCCAGATTATTAGTTTGCATTGTCTTATTTCTCTTAGATGCTTGGGAATCCATATTTGCGTTTGAGGTGCTGCCGAACTTGTGGATGAATGAACCTGTTCTTTTGGGAAAGTTTATGTTAAGAGCTTCATTTGGGCTGATATGGATTTGATACCTTTTTCCTACAACTCCTTTTGTTTCCTTTTTTTGTTTTCCCTTCTTTCTCCTTTTATTTTGTCCTCCCCTCTCTTAATTTCTTTTATGTAGTAAGAACCTGCTGACGGGCACTAGTCATCCTATGTTTTATAATTCTACTCTGTTGATATCACTTTTAATCTTTTAAAAGTTTTTTATATTTATTGTTGAGTATTACTTTTTCTTGTGTAATTTCTTTTTCCTCCAGTACCTTCGTCTCTTAATCTTGGGCTTCTTAGTTATTATCTTTCCTGACTAATAATAATAAATAGAGGTTACCTTCGTGTGCTCTTGGATGTGTTAATTAAGTTCCTTTTAAAGTATGAGTTCAATCTTTAGGACTAATTAATCTTGTTAAGCAATCCCTTTCTTAAAAGATTCAGAAGGGGTGATGAGATAAGAAGTTCATTATCTGGCTAAGTTTAAAACTGTTCTTCGGTCCTACTGTTCTGTTAATTTTCTAGACTGTGAATATAATATTATGTTCTTGTGATGCTGGTTCAGGATTAGTAGTGGAGGATCTTTCCTTTGCTTTGGTAGCAGTGTTCACTGCTTCTTTGCCTTCATCCTCATTCTCACTCACTTTCATCATTTTTGCCTCTACTTCCATTCTCATGTTCTTCCCTGTTCATCGCCTTCATTGTTGTCATTGCCTGTTCATATTTTCCATGTTGTTGTTTCCCTAGTTTTCATCGAATTGGTTCTTACAATTGAACTGTGAATTGGGTTGTTTGATTGTCAAAGTTTTTCAGTTGGTAA

mRNA sequence

ACCGCCTCGACGCAAAATTTTGATTCGTCTTCTCAAAGAGTTGGTTCTGTTCAATTGAAGGGATGCACCACTGCTCTCAAAGACGCTAATCTCGAAGCCCAAATTCGAGCTGCTGCCGACCGTGATGTCACGCACCGCAAGATTTTCGTCCATGGCCTCGGTTGGGACACCACCAAAGAAACCCTAACTTCGGTTTTTGAATCATTTGGTGAAATTGAAGACTGCAATGTGGTTTTGGATAAGAATACAGGGAAGGCTAAGGGCTACGGGTTTATTTTGTTCAAATCCCGTCAGGGTGCGACTAAAGCGTTGAAGGAACCTAGGAAGAAGATTAATAACAGGATGGCTTCGTGTCAATTGGCTTCTGTGGGTTCAGTGCCGCCGCCTCAAAGTCAGGAGGTTGGGCCGCGGAAGATTTATGTGGCGAATGTGCACCATAACGTGGATGCTGAGAGGCTTAGGACGTTCTTTGCGAAGTTTGGGGAATTGGAGATGGGTCCGATTGGGTTCGATCCCGAAACAGGGAAATCGAGGGGTTATGCTATTTTTATTTACAGAACGAATGAAGGTGCGAGGAGGGCTCTTGAGGAGCCACACAAAGTATTCGAAGGGAACAAATTGCATTGCCAGAGGGCGGCTGAGGGGAAGAACAAGAATCAGAATTCGACGCAGGCAGTGCAAAGCTTGGCGCAGACTCAGCCGCCGATGATGGCGGCCATGGCTACAGCTTCAAATTTGCCATTGTTTGCTCAACATCCGAGCCTCAATTCTGTGTGCGGTGGATTTGGGAACCCAGCTTTGGGAGGTGGAATGTTGAACCAGGGAGTAGTTCCCATGAGTCAAGTGGGTCTGGTTGGTAGTTCAGTTGGGGCTGGGATAGGCTTGAGTGGTTACAGTGGGGGTTCATATGGCTTAAGCCAATTAAGTGCCGGTGGTTCGTCAATGCTAGGCTCTTACGGGTCCGATTCTTCATCACTGAAGGGGTTGCCGCACATTTATTCGAGCACAATGCTTGGCAAGGCCGTATCGGATCGGGGTCCGGCGGCTTCTGGTGGGTCTCTCGGAGGATACACATCATATTTATGTTGGTAA

Coding sequence (CDS)

ACCGCCTCGACGCAAAATTTTGATTCGTCTTCTCAAAGAGTTGGTTCTGTTCAATTGAAGGGATGCACCACTGCTCTCAAAGACGCTAATCTCGAAGCCCAAATTCGAGCTGCTGCCGACCGTGATGTCACGCACCGCAAGATTTTCGTCCATGGCCTCGGTTGGGACACCACCAAAGAAACCCTAACTTCGGTTTTTGAATCATTTGGTGAAATTGAAGACTGCAATGTGGTTTTGGATAAGAATACAGGGAAGGCTAAGGGCTACGGGTTTATTTTGTTCAAATCCCGTCAGGGTGCGACTAAAGCGTTGAAGGAACCTAGGAAGAAGATTAATAACAGGATGGCTTCGTGTCAATTGGCTTCTGTGGGTTCAGTGCCGCCGCCTCAAAGTCAGGAGGTTGGGCCGCGGAAGATTTATGTGGCGAATGTGCACCATAACGTGGATGCTGAGAGGCTTAGGACGTTCTTTGCGAAGTTTGGGGAATTGGAGATGGGTCCGATTGGGTTCGATCCCGAAACAGGGAAATCGAGGGGTTATGCTATTTTTATTTACAGAACGAATGAAGGTGCGAGGAGGGCTCTTGAGGAGCCACACAAAGTATTCGAAGGGAACAAATTGCATTGCCAGAGGGCGGCTGAGGGGAAGAACAAGAATCAGAATTCGACGCAGGCAGTGCAAAGCTTGGCGCAGACTCAGCCGCCGATGATGGCGGCCATGGCTACAGCTTCAAATTTGCCATTGTTTGCTCAACATCCGAGCCTCAATTCTGTGTGCGGTGGATTTGGGAACCCAGCTTTGGGAGGTGGAATGTTGAACCAGGGAGTAGTTCCCATGAGTCAAGTGGGTCTGGTTGGTAGTTCAGTTGGGGCTGGGATAGGCTTGAGTGGTTACAGTGGGGGTTCATATGGCTTAAGCCAATTAAGTGCCGGTGGTTCGTCAATGCTAGGCTCTTACGGGTCCGATTCTTCATCACTGAAGGGGTTGCCGCACATTTATTCGAGCACAATGCTTGGCAAGGCCGTATCGGATCGGGGTCCGGCGGCTTCTGGTGGGTCTCTCGGAGGATACACATCATATTTATGTTGGTAA

Protein sequence

TASTQNFDSSSQRVGSVQLKGCTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNSVCGGFGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGSDSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYLCW

Homology

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BLAST of Carg14191 vs. NCBI nr
Match: XP_023546817.1 (UBP1-associated protein 2B-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 667.9 bits (1722), Expect = 1.9e-188
Identity = 340/342 (99.42%), Postives = 341/342 (99.71%), Query Frame = 0


Query: 22  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK 81
           CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK
Sbjct: 65  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK 124

Query: 82  NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV 141
           NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV
Sbjct: 125 NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV 184

Query: 142 ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV 201
           ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV
Sbjct: 185 ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV 244

Query: 202 FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNSVCGG 261
           FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLN VCGG
Sbjct: 245 FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNPVCGG 304

Query: 262 FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS 321
           FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS
Sbjct: 305 FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS 364

Query: 322 DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYLCW 364
           DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYLC+
Sbjct: 365 DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYLCF 406

[Close]

BLAST of Carg14191 vs. NCBI nr
Match: XP_023521597.1 (UBP1-associated protein 2B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 664.1 bits (1712), Expect = 2.8e-187
Identity = 339/340 (99.71%), Postives = 339/340 (99.71%), Query Frame = 0


Query: 22  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK 81
           CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK
Sbjct: 65  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK 124

Query: 82  NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV 141
           NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV
Sbjct: 125 NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV 184

Query: 142 ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV 201
           ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV
Sbjct: 185 ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV 244

Query: 202 FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNSVCGG 261
           FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLN VCGG
Sbjct: 245 FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNPVCGG 304

Query: 262 FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS 321
           FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS
Sbjct: 305 FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS 364

Query: 322 DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL 362
           DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL
Sbjct: 365 DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL 404

[Close]

BLAST of Carg14191 vs. NCBI nr
Match: XP_023546825.1 (UBP1-associated protein 2B-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 664.1 bits (1712), Expect = 2.8e-187
Identity = 339/340 (99.71%), Postives = 339/340 (99.71%), Query Frame = 0


Query: 22  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK 81
           CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK
Sbjct: 65  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK 124

Query: 82  NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV 141
           NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV
Sbjct: 125 NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV 184

Query: 142 ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV 201
           ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV
Sbjct: 185 ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV 244

Query: 202 FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNSVCGG 261
           FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLN VCGG
Sbjct: 245 FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNPVCGG 304

Query: 262 FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS 321
           FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS
Sbjct: 305 FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS 364

Query: 322 DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL 362
           DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL
Sbjct: 365 DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL 404

[Close]

BLAST of Carg14191 vs. NCBI nr
Match: XP_023546832.1 (UBP1-associated protein 2B-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 664.1 bits (1712), Expect = 2.8e-187
Identity = 339/340 (99.71%), Postives = 339/340 (99.71%), Query Frame = 0


Query: 22  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK 81
           CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK
Sbjct: 65  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK 124

Query: 82  NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV 141
           NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV
Sbjct: 125 NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV 184

Query: 142 ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV 201
           ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV
Sbjct: 185 ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV 244

Query: 202 FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNSVCGG 261
           FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLN VCGG
Sbjct: 245 FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNPVCGG 304

Query: 262 FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS 321
           FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS
Sbjct: 305 FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS 364

Query: 322 DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL 362
           DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL
Sbjct: 365 DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL 404

[Close]

BLAST of Carg14191 vs. NCBI nr
Match: XP_022941786.1 (UBP1-associated protein 2B-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 663.3 bits (1710), Expect = 4.7e-187
Identity = 338/342 (98.83%), Postives = 339/342 (99.12%), Query Frame = 0


Query: 22  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK 81
           CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFE FGEIEDCNVVLDK
Sbjct: 65  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFELFGEIEDCNVVLDK 124

Query: 82  NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV 141
           NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV
Sbjct: 125 NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV 184

Query: 142 ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV 201
           ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV
Sbjct: 185 ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV 244

Query: 202 FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNSVCGG 261
           FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLN VC G
Sbjct: 245 FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNPVCSG 304

Query: 262 FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS 321
           FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS
Sbjct: 305 FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYGS 364

Query: 322 DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYLCW 364
           DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYLC+
Sbjct: 365 DSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYLCF 406

[Close]

BLAST of Carg14191 vs. TAIR10
Match: AT2G41060.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 222.6 bits (566), Expect = 3.9e-58
Identity = 105/190 (55.26%), Postives = 140/190 (73.68%), Query Frame = 0


Query: 34  QIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTGKAKGYGFIL 93
           +IR  AD D+ HRKIFVHGLGWDT  ++L   F+ +GEIEDC  V+DK +G++KGYGFIL
Sbjct: 116 RIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFIL 175

Query: 94  FKSRQGATKALKEPRKKINNRMASCQLASVGS------VPPPQ--SQEVGPRKIYVANVH 153
           FKSR GA  ALK+P+KKI  RM +CQLAS+G       V P Q  + E   RKIYV+NV 
Sbjct: 176 FKSRSGARNALKQPQKKIGTRMTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVS 235

Query: 154 HNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKVFEGN 213
            ++D ++L  FF++FGE+E GP+G D  TG+ +G+A+F+YR+ E A++ALEEPHK FEG+
Sbjct: 236 ADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGH 295

Query: 214 KLHCQRAAEG 216
            LHC +A +G
Sbjct: 296 VLHCHKANDG 305

[Close]

BLAST of Carg14191 vs. TAIR10
Match: AT3G56860.3 (UBP1-associated protein 2A)

HSP 1 Score: 216.9 bits (551), Expect = 2.1e-56
Identity = 126/286 (44.06%), Postives = 163/286 (56.99%), Query Frame = 0


Query: 25  ALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTG 84
           A K  ++  +IR  AD D  HRKIFVHGLGWDT  ETL   F+ +GEIEDC  V DK +G
Sbjct: 119 AEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISG 178

Query: 85  KAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSV------------PPPQ-- 144
           K+KGYGFIL+KSR GA  ALK+P+KKI +RM +CQLAS G V             P Q  
Sbjct: 179 KSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVFGGAPIAAAAVSAPAQHS 238

Query: 145 SQEVGPRKIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEG 204
           + E   +KIYV+NV   +D ++L  FF+KFGE+E GP+G D  TG+ +G+ +F+Y+++E 
Sbjct: 239 NSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSES 298

Query: 205 ARRALEEPHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFA 264
           A+RALEEPHK FEG+ LHCQ+A +G    +         A   P            P   
Sbjct: 299 AKRALEEPHKTFEGHILHCQKAIDGPKPGKQQQHHHNPHAYNNPRYQRNDNNGYGPP--G 358

Query: 265 QHPSLNSVCGGFGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLS 297
            H  L +     GNPA  GG   Q + P     L       G GL+
Sbjct: 359 GHGHLMA-----GNPAGMGGPTAQVINPAIGQALTALLASQGAGLA 397

[Close]

BLAST of Carg14191 vs. TAIR10
Match: AT3G15010.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 184.5 bits (467), Expect = 1.2e-46
Identity = 91/183 (49.73%), Postives = 127/183 (69.40%), Query Frame = 0


Query: 35  IRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTGKAKGYGFILF 94
           +R  AD D++ RK+F+ GL  DTT E L S+F S+G++E+  V+LDK TGK+KGYGF+ F
Sbjct: 64  VRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTF 123

Query: 95  KSRQGATKALKEPRKKINNRMASCQLASVGSV-PPPQSQEVGPRKIYVANVHHNVDAERL 154
               GA  ALKEP KKI+ R+   QLA+ G+     Q  ++  RKIYVANV  ++ A+RL
Sbjct: 124 MHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPADRL 183

Query: 155 RTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKVFEGNKLHCQRAA 214
              F  +G++E GP+GFD  TGKSRG+A+F+Y+T EGA+ AL +P KV +G  L+C+ A 
Sbjct: 184 LNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCKLAV 243

Query: 215 EGK 217
           +GK
Sbjct: 244 DGK 246

[Close]

BLAST of Carg14191 vs. TAIR10
Match: AT2G22090.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-33
Identity = 67/124 (54.03%), Postives = 95/124 (76.61%), Query Frame = 0


Query: 22  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK 81
           C+ +   +++ + +  AADRDVTHRKIFV+GL W+TT+ETL  VFE +GEIE+C VV+DK
Sbjct: 80  CSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDK 139

Query: 82  NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQS-QEVGPRKIY 141
            TGKAKG+GF++FK+R+GA +ALKEP+K+I NR A+CQLAS+G     +   + GP KI 
Sbjct: 140 ATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLASMGPAASGKGHDQPGPVKIS 199

Query: 142 VANV 145
           + ++
Sbjct: 200 MGSM 203

[Close]

BLAST of Carg14191 vs. TAIR10
Match: AT2G19380.1 (RNA recognition motif (RRM)-containing protein)

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-28
Identity = 56/99 (56.57%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 24  TALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNT 83
           TA K + L + I  +ADRD+  R IFV G GWDTT+E L + FES+GEIE+C+VV+DK+T
Sbjct: 386 TAEKGSRLISAILESADRDIAQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVVMDKDT 445

Query: 84  GKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLAS 123
           G+ KGYGF++FK+R+GA +ALK P K++ NR+  C LAS
Sbjct: 446 GRGKGYGFVMFKTRKGAREALKRPEKRMYNRIVVCNLAS 484

[Close]

BLAST of Carg14191 vs. Swiss-Prot
Match: sp|O80678|UBA2B_ARATH (UBP1-associated protein 2B OS=Arabidopsis thaliana OX=3702 GN=UBA2B PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 7.0e-57
Identity = 105/190 (55.26%), Postives = 140/190 (73.68%), Query Frame = 0


Query: 34  QIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTGKAKGYGFIL 93
           +IR  AD D+ HRKIFVHGLGWDT  ++L   F+ +GEIEDC  V+DK +G++KGYGFIL
Sbjct: 116 RIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFIL 175

Query: 94  FKSRQGATKALKEPRKKINNRMASCQLASVGS------VPPPQ--SQEVGPRKIYVANVH 153
           FKSR GA  ALK+P+KKI  RM +CQLAS+G       V P Q  + E   RKIYV+NV 
Sbjct: 176 FKSRSGARNALKQPQKKIGTRMTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVS 235

Query: 154 HNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKVFEGN 213
            ++D ++L  FF++FGE+E GP+G D  TG+ +G+A+F+YR+ E A++ALEEPHK FEG+
Sbjct: 236 ADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGH 295

Query: 214 KLHCQRAAEG 216
            LHC +A +G
Sbjct: 296 VLHCHKANDG 305

[Close]

BLAST of Carg14191 vs. Swiss-Prot
Match: sp|Q9LES2|UBA2A_ARATH (UBP1-associated protein 2A OS=Arabidopsis thaliana OX=3702 GN=UBA2A PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.8e-55
Identity = 126/286 (44.06%), Postives = 163/286 (56.99%), Query Frame = 0


Query: 25  ALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTG 84
           A K  ++  +IR  AD D  HRKIFVHGLGWDT  ETL   F+ +GEIEDC  V DK +G
Sbjct: 119 AEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISG 178

Query: 85  KAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSV------------PPPQ-- 144
           K+KGYGFIL+KSR GA  ALK+P+KKI +RM +CQLAS G V             P Q  
Sbjct: 179 KSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVFGGAPIAAAAVSAPAQHS 238

Query: 145 SQEVGPRKIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEG 204
           + E   +KIYV+NV   +D ++L  FF+KFGE+E GP+G D  TG+ +G+ +F+Y+++E 
Sbjct: 239 NSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSES 298

Query: 205 ARRALEEPHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFA 264
           A+RALEEPHK FEG+ LHCQ+A +G    +         A   P            P   
Sbjct: 299 AKRALEEPHKTFEGHILHCQKAIDGPKPGKQQQHHHNPHAYNNPRYQRNDNNGYGPP--G 358

Query: 265 QHPSLNSVCGGFGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLS 297
            H  L +     GNPA  GG   Q + P     L       G GL+
Sbjct: 359 GHGHLMA-----GNPAGMGGPTAQVINPAIGQALTALLASQGAGLA 397

[Close]

BLAST of Carg14191 vs. Swiss-Prot
Match: sp|Q9LKA4|UBA2C_ARATH (UBP1-associated protein 2C OS=Arabidopsis thaliana OX=3702 GN=UBA2C PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.1e-45
Identity = 91/183 (49.73%), Postives = 127/183 (69.40%), Query Frame = 0


Query: 35  IRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTGKAKGYGFILF 94
           +R  AD D++ RK+F+ GL  DTT E L S+F S+G++E+  V+LDK TGK+KGYGF+ F
Sbjct: 64  VRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTF 123

Query: 95  KSRQGATKALKEPRKKINNRMASCQLASVGSV-PPPQSQEVGPRKIYVANVHHNVDAERL 154
               GA  ALKEP KKI+ R+   QLA+ G+     Q  ++  RKIYVANV  ++ A+RL
Sbjct: 124 MHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPADRL 183

Query: 155 RTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKVFEGNKLHCQRAA 214
              F  +G++E GP+GFD  TGKSRG+A+F+Y+T EGA+ AL +P KV +G  L+C+ A 
Sbjct: 184 LNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCKLAV 243

Query: 215 EGK 217
           +GK
Sbjct: 244 DGK 246

[Close]

BLAST of Carg14191 vs. Swiss-Prot
Match: sp|Q9SHZ6|UBA1A_ARATH (UBP1-associated proteins 1A OS=Arabidopsis thaliana OX=3702 GN=UBA1A PE=1 SV=2)

HSP 1 Score: 141.4 bits (355), Expect = 2.0e-32
Identity = 67/124 (54.03%), Postives = 95/124 (76.61%), Query Frame = 0


Query: 22  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK 81
           C+ +   +++ + +  AADRDVTHRKIFV+GL W+TT+ETL  VFE +GEIE+C VV+DK
Sbjct: 80  CSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDK 139

Query: 82  NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQS-QEVGPRKIY 141
            TGKAKG+GF++FK+R+GA +ALKEP+K+I NR A+CQLAS+G     +   + GP KI 
Sbjct: 140 ATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLASMGPAASGKGHDQPGPVKIS 199

Query: 142 VANV 145
           + ++
Sbjct: 200 MGSM 203

[Close]

BLAST of Carg14191 vs. Swiss-Prot
Match: sp|O64571|UBA1C_ARATH (UBP1-associated proteins 1C OS=Arabidopsis thaliana OX=3702 GN=UBA1C PE=3 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 2.6e-27
Identity = 56/99 (56.57%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 24  TALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNT 83
           TA K + L + I  +ADRD+  R IFV G GWDTT+E L + FES+GEIE+C+VV+DK+T
Sbjct: 386 TAEKGSRLISAILESADRDIAQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVVMDKDT 445

Query: 84  GKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLAS 123
           G+ KGYGF++FK+R+GA +ALK P K++ NR+  C LAS
Sbjct: 446 GRGKGYGFVMFKTRKGAREALKRPEKRMYNRIVVCNLAS 484

[Close]

BLAST of Carg14191 vs. TrEMBL
Match: tr|A0A0A0KXV0|A0A0A0KXV0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G031080 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 1.2e-151
Identity = 282/341 (82.70%), Postives = 296/341 (86.80%), Query Frame = 0


Query: 22  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK 81
           CTTALKD NL+AQIRAAADRDVTHRKIFVHGLGWDTT+ETLTSVFESFGEIEDCNVV+D+
Sbjct: 65  CTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNVVMDR 124

Query: 82  NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV 141
           NTGKAKGYGFILFKSRQGA KALKEPRKKINNRM SCQLASVGSVPPPQSQEVGPRKIYV
Sbjct: 125 NTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPRKIYV 184

Query: 142 ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV 201
           ANVHHNVDAERLR FFAKFG+LEMGPIGFDPETGKSRGYAIFIYRTNEGAR+ALEEPHKV
Sbjct: 185 ANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEEPHKV 244

Query: 202 FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLN-SVCG 261
           FEGNKLHCQRA+EGKNKNQNSTQA +SL Q Q P+MAAMA A NL LFAQHP LN  V G
Sbjct: 245 FEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNHPVYG 304

Query: 262 GFGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSMLGSYG 321
           G+G+PALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGG                   
Sbjct: 305 GYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGXXXXXXXXXXXXXXXXXXX 364

Query: 322 SDSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGYTSYL 362
                   LPHIYSSTMLGK VS+ G AA+GGSLGGYTS+L
Sbjct: 365 XXXXXXXXLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 405

[Close]

BLAST of Carg14191 vs. TrEMBL
Match: tr|A0A1S3BX55|A0A1S3BX55_CUCME (UBP1-associated protein 2B-like OS=Cucumis melo OX=3656 GN=LOC103494399 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 2.3e-142
Identity = 256/280 (91.43%), Postives = 266/280 (95.00%), Query Frame = 0


Query: 22  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK 81
           CTTALKD NL+AQIRAAADRDVTHRKIFVHGLGWDTT+ETLTSVFESFGEIEDCNVV+D+
Sbjct: 65  CTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNVVMDR 124

Query: 82  NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV 141
           NTGKAKGYGF+LFKSRQGA KALKEPRKKINNRM SCQLASVGSVPPPQSQEVGPRKIYV
Sbjct: 125 NTGKAKGYGFVLFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPRKIYV 184

Query: 142 ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV 201
           ANVHHNVDAERLR FFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGAR+ALEEPHKV
Sbjct: 185 ANVHHNVDAERLRAFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEEPHKV 244

Query: 202 FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNSVCGG 261
           FEGNKLHCQRA+EGKNKNQNSTQA QSL Q Q P+MAAMA A NL LFAQHP LN V GG
Sbjct: 245 FEGNKLHCQRASEGKNKNQNSTQAAQSLGQNQTPVMAAMAAAPNLQLFAQHPGLNPVYGG 304

Query: 262 FGNPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGG 302
           +G+PALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGG
Sbjct: 305 YGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGG 344

[Close]

BLAST of Carg14191 vs. TrEMBL
Match: tr|A0A251NS32|A0A251NS32_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G177300 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.3e-84
Identity = 192/388 (49.48%), Postives = 246/388 (63.40%), Query Frame = 0


Query: 25  ALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTG 84
           A KD+ L  +IR AAD DV+HRKIF+HGLGWDTT+ETL + FE FGEIE+CN+VLDK TG
Sbjct: 95  ASKDSALFNRIRDAADGDVSHRKIFIHGLGWDTTRETLVAAFEPFGEIEECNLVLDKATG 154

Query: 85  KAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPP---------QSQEVG 144
           KAKGYGF+LFK+R+GA KALK P+K I+NR+ASCQLASVG                 +  
Sbjct: 155 KAKGYGFVLFKTRRGAAKALKNPKKNISNRIASCQLASVGPANXXXXXXXXXFNAQSDSA 214

Query: 145 PRKIYVANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRAL 204
            RKIYV++V H+VD E+LR FFAKFGE+E GP+GFD +TGK +G+A+F+Y+T EGA++AL
Sbjct: 215 SRKIYVSSVPHDVDGEKLRIFFAKFGEIETGPMGFDSQTGKCKGFALFLYKTVEGAKKAL 274

Query: 205 EEPHKVFEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSL 264
           EEP KVFEG++L CQ+AAEG +KN+NS  A     Q Q P +AA+A A N+ LF QHP+L
Sbjct: 275 EEPFKVFEGHQLQCQKAAEG-SKNKNSAVAPPQ-GQMQQPTLAAVAAAQNMALFGQHPNL 334

Query: 265 NSVCGG-FGNPALGGGM----------------------LNQGVVPMSQVGLVGSSVGAG 324
           N + GG  GN  +GGG                             P+SQVG VG+ VG  
Sbjct: 335 NPLYGGLMGN--VGGGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSQVGQVGAGVG-- 394

Query: 325 IGLSGYSGGSY---------------GLSQLSAGGSSMLGSYGSDSS--SLKGLPHIYSS 364
               GYSGGS+                         S+LG+YG+  S   L+GL H+Y +
Sbjct: 395 ----GYSGGSHXXXXXXXXXXXXXXXXXXXXXXXNPSLLGAYGTSGSLPMLQGLQHVYPN 454

[Close]

BLAST of Carg14191 vs. TrEMBL
Match: tr|A0A1U8AFK6|A0A1U8AFK6_NELNU (UBP1-associated protein 2A-like OS=Nelumbo nucifera OX=4432 GN=LOC104600050 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.0e-84
Identity = 168/291 (57.73%), Postives = 211/291 (72.51%), Query Frame = 0


Query: 22  CTTALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDK 81
           C  A+KDA+L  +IR+ AD DV+HRKIFVHGLGWDTT+ETL S F+ FGEIEDCNVV+D+
Sbjct: 68  CDAAVKDASLLQRIRSIADCDVSHRKIFVHGLGWDTTRETLISAFQPFGEIEDCNVVMDR 127

Query: 82  NTGKAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYV 141
            TGKAKGYGF+LF SR GAT ALK+P+KKINNR+ SCQLASVG V   Q+Q+   RKIY+
Sbjct: 128 ATGKAKGYGFVLFTSRAGATNALKQPQKKINNRVTSCQLASVGPVTSQQTQDTTGRKIYI 187

Query: 142 ANVHHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKV 201
           +NVH + D E+LR FFAKFGE+E GP+GFD  TGKSRG+A+F+Y+T EGAR+ALEEP+K+
Sbjct: 188 SNVHSDADPEKLRAFFAKFGEIENGPLGFDLLTGKSRGFAMFVYKTQEGARKALEEPYKM 247

Query: 202 FEGNKLHCQRAAEGKNKNQNSTQAVQSLAQTQPPMMAAMATASNLPLFAQHPSLNSVCGG 261
           FEG++LHCQRA E  NKN+ + QAVQ+      P++AA+A A NL LF+QHPSLN + GG
Sbjct: 248 FEGHQLHCQRAIE--NKNKPAAQAVQA------PVLAAVAAAQNLALFSQHPSLNPLYGG 307

Query: 262 -FGNPALGGGMLNQGVVPMSQVG--------LVGSSVGAGIGLSGYSGGSY 304
             GNP                          + G+S+G  +GL GY   S+
Sbjct: 308 LLGNPTXXXXXXXXXXXXXXXXXXXXXXXXQVAGTSLGNAVGLGGYDASSH 350

[Close]

BLAST of Carg14191 vs. TrEMBL
Match: tr|A0A2R6S354|A0A2R6S354_ACTCH (UBP1-associated protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc01239 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.1e-81
Identity = 179/339 (52.80%), Postives = 231/339 (68.14%), Query Frame = 0


Query: 25  ALKDANLEAQIRAAADRDVTHRKIFVHGLGWDTTKETLTSVFESFGEIEDCNVVLDKNTG 84
           A  DA L  ++R AAD +V+HRKIFV+GLGWDTT+ETL + FE FGEIEDC++V DK TG
Sbjct: 77  AASDAALFRRLRDAADGEVSHRKIFVYGLGWDTTRETLVAAFEPFGEIEDCHLVTDKVTG 136

Query: 85  KAKGYGFILFKSRQGATKALKEPRKKINNRMASCQLASVGSVPPPQSQEVGPRKIYVANV 144
           +AKGY F+LFK+R+ A KALK P KKI NRMASCQLAS G  P PQSQ+   RKIYV+NV
Sbjct: 137 RAKGYAFVLFKTRRAAAKALKNPSKKIGNRMASCQLASAGPGPSPQSQDGSNRKIYVSNV 196

Query: 145 HHNVDAERLRTFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARRALEEPHKVFEG 204
             +VD E+LR+FF KFGE+E GPIGFD  TGKSRG+A+F+Y++ E  R+AL+EP+KVFEG
Sbjct: 197 PADVDREKLRSFFEKFGEIESGPIGFDMYTGKSRGFALFVYKSEESVRKALQEPYKVFEG 256

Query: 205 NKLHCQRAAEGKNKNQNSTQAVQSLAQ-TQPPMMAAMATASNLPLFAQHPSLNSVCGGFG 264
            +LHC++A EGK+K      AV ++ Q  Q P++AA+A A N  L  Q+P  +       
Sbjct: 257 QQLHCKKATEGKDKVGGGEAAVTTVVQPVQGPVLAALAAAQNFALLGQNPMYSGYTASPN 316

Query: 265 ---NPALGGGMLNQGVVPMSQVGLVGSSVGAGI-GLSGY-SGGSYGLSQLSAGGSSMLGS 324
              NP +G GM   G VP    G++GS   A + G  GY + GS+GL  L  GG S+LGS
Sbjct: 317 PGLNPIVGSGM--GGFVP----GVIGSGQMAQVGGFPGYGAAGSHGLGSL-GGGQSVLGS 376

Query: 325 YGSDSSSLKGLPHIYSSTMLGKAVSDRGPAASGGSLGGY 358
           YGS   +L+GL + Y  + +G+  S  G   + GS  GY
Sbjct: 377 YGSGGPALQGLQNPYPISQIGQTSSAPG---TSGSFSGY 405

The following BLAST results are available for this feature:

BLAST of Carg14191 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546817.1	1.9e-188	99.42	UBP1-associated protein 2B-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023521597.1	2.8e-187	99.71	UBP1-associated protein 2B-like [Cucurbita pepo subsp. pepo]	[more]
XP_023546825.1	2.8e-187	99.71	UBP1-associated protein 2B-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023546832.1	2.8e-187	99.71	UBP1-associated protein 2B-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_022941786.1	4.7e-187	98.83	UBP1-associated protein 2B-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Carg14191 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41060.1	3.9e-58	55.26	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G56860.3	2.1e-56	44.06	UBP1-associated protein 2A	[more]
AT3G15010.1	1.2e-46	49.73	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G22090.2	1.1e-33	54.03	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G19380.1	1.4e-28	56.57	RNA recognition motif (RRM)-containing protein	[more]

BLAST of Carg14191 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O80678\|UBA2B_ARATH	7.0e-57	55.26	UBP1-associated protein 2B OS=Arabidopsis thaliana OX=3702 GN=UBA2B PE=2 SV=1	[more]
sp\|Q9LES2\|UBA2A_ARATH	3.8e-55	44.06	UBP1-associated protein 2A OS=Arabidopsis thaliana OX=3702 GN=UBA2A PE=1 SV=1	[more]
sp\|Q9LKA4\|UBA2C_ARATH	2.1e-45	49.73	UBP1-associated protein 2C OS=Arabidopsis thaliana OX=3702 GN=UBA2C PE=2 SV=1	[more]
sp\|Q9SHZ6\|UBA1A_ARATH	2.0e-32	54.03	UBP1-associated proteins 1A OS=Arabidopsis thaliana OX=3702 GN=UBA1A PE=1 SV=2	[more]
sp\|O64571\|UBA1C_ARATH	2.6e-27	56.57	UBP1-associated proteins 1C OS=Arabidopsis thaliana OX=3702 GN=UBA1C PE=3 SV=2	[more]

BLAST of Carg14191 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KXV0\|A0A0A0KXV0_CUCSA	1.2e-151	82.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G031080 PE=4 SV=1	[more]
tr\|A0A1S3BX55\|A0A1S3BX55_CUCME	2.3e-142	91.43	UBP1-associated protein 2B-like OS=Cucumis melo OX=3656 GN=LOC103494399 PE=4 SV=...	[more]
tr\|A0A251NS32\|A0A251NS32_PRUPE	1.3e-84	49.48	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G177300 PE=4 SV=1	[more]
tr\|A0A1U8AFK6\|A0A1U8AFK6_NELNU	5.0e-84	57.73	UBP1-associated protein 2A-like OS=Nelumbo nucifera OX=4432 GN=LOC104600050 PE=4...	[more]
tr\|A0A2R6S354\|A0A2R6S354_ACTCH	5.1e-81	52.80	UBP1-associated protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14191-RA	Carg14191-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 47..119 e-value: 1.6E-21 score: 87.5 coord: 138..210 e-value: 1.4E-14 score: 64.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 139..208 e-value: 3.0E-10 score: 39.7 coord: 48..114 e-value: 2.2E-16 score: 59.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 46..146 score: 15.852
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 137..214 score: 13.447
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 131..239 e-value: 6.5E-19 score: 70.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 3..126 e-value: 2.0E-23 score: 85.1
None	No IPR available	PANTHER	PTHR44578	FAMILY NOT NAMED	coord: 23..352
None	No IPR available	PANTHER	PTHR44578:SF5	SUBFAMILY NOT NAMED	coord: 23..352
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 137..212 e-value: 5.89183E-28 score: 103.849
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 46..121 e-value: 2.84542E-31 score: 113.094
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 45..214

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg14191	Cla014500	Watermelon (97103) v1	carwmB0940
Carg14191	Csa4G031080	Cucumber (Chinese Long) v2	carcuB0958
Carg14191	MELO3C017573	Melon (DHL92) v3.5.1	carmeB0924
Carg14191	ClCG07G009360	Watermelon (Charleston Gray)	carwcgB0916
Carg14191	CSPI04G04810	Wild cucumber (PI 183967)	carcpiB0981
Carg14191	Cucsa.029400	Cucumber (Gy14) v1	carcgyB1056
Carg14191	CmaCh16G006710	Cucurbita maxima (Rimu)	carcmaB1286
Carg14191	CmoCh16G007320	Cucurbita moschata (Rifu)	carcmoB1258
Carg14191	CmoCh04G008510	Cucurbita moschata (Rifu)	carcmoB1259
Carg14191	Lsi07G001850	Bottle gourd (USVL1VR-Ls)	carlsiB859
Carg14191	Cp4.1LG01g09540	Cucurbita pepo (Zucchini)	carcpeB1302
Carg14191	Cp4.1LG14g01480	Cucurbita pepo (Zucchini)	carcpeB1301
Carg14191	CsGy4G004720	Cucumber (Gy14) v2	carcgybB0931
Carg14191	MELO3C017573.2	Melon (DHL92) v3.6.1	carmedB0930
Carg14191	CsaV3_UNG186420	Cucumber (Chinese Long) v3	carcucB0986
Carg14191	CsaV3_4G004880	Cucumber (Chinese Long) v3	carcucB0982
Carg14191	Bhi01G001914	Wax gourd	carwgoB1086

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg14191	Carg05786	Silver-seed gourd	carcarB646

The following block(s) are covering this gene:


Gene	Organism	Block
Carg14191	Silver-seed gourd	carcarB602
Carg14191	Cucurbita maxima (Rimu)	carcmaB1287
Carg14191	Cucurbita maxima (Rimu)	carcmaB1288
Carg14191	Cucurbita maxima (Rimu)	carcmaB1289
Carg14191	Cucurbita pepo (Zucchini)	carcpeB1300
Carg14191	Cucurbita pepo (Zucchini)	carcpeB1304
Carg14191	Wild cucumber (PI 183967)	carcpiB0982
Carg14191	Watermelon (Charleston Gray)	carwcgB0915
Carg14191	Watermelon (97103) v1	carwmB0942
Carg14191	Watermelon (97103) v2	carwmbB0987
Carg14191	Watermelon (97103) v2	carwmbB0989