CSPI04G04810 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G04810
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	RNA binding protein
Location	Chr4 : 3193215 .. 3198589 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTAATATTAAAATTTGCTTTAGACTCGGGGCAGTCCGCCGAAACCTTGTTTCGTCTTCCTCCTCTTCTTCTTCTTTTGAAGCCGCCGGCTCAGTAGCTCTCCAATGGAGGGAACCAACAAAACCGCCAAAAGAAAGCTGGTCAAGAAATCTGAAAACAAGGTCGATAAGAAACTCAAGAAAGAGCTTGAACATAACGTTCAGTCTCAACCAGTCGACGACGTCTCCGACTCCGATTTCGACGATCTTCCCAAACTCCTCGAACCCTTCTCCAAGACCCAATTAATTGAGCTCATTTGCACCACCGCTCTCAAAGACCCAAATCTTCAAGCCCAAATTCGAGCTGCTGCCGACCGCGATGTTACTCACCGCAAGATATTTGTCCATGGCCTCGGTTGGGACACCACCCGAGAAACCCTAACTTCGGTTTTTGAATCTTTTGGTGAAATTGAAGATTGCAATGTGGTTATGGACAGAAACACAGGTAAGGCTAAGGGATATGGGTTTATTTTGTTCAAATCCCGGCAAGGTGCAATTAAGGCGTTGAAGGAACCTAGGAAGAAGATTAATAACCGGATGACTTCGTGTCAATTGGCTTCTGTGGGTTCAGTGCCGCCCCCGCAAAGCCAGGAGGTTGGGCCGCGGAAGATTTATGTGGCTAATGTGCACCATAATGTGGATGCTGAGAGGCTTAGGGCGTTCTTTGCGAAATTTGGAGACTTAGAGATGGGTCCGATTGGGTTCGATCCCGAGACAGGGAAATCGAGGGGTTATGCCATTTTTATTTATAGAACGAATGAAGGTGCGAGGAAGGCTCTTGAGGAACCACACAAAGTGTTTGAAGGGAACAAATTGCACTGCCAGAGGGCGTCTGAGGGGAAGAACAAGAATCAAAATTCCACACAGGCAGCGGAAAGCTTAGGGCAGAATCAGACGCCGGTTATGGCGGCAATGGCCGCAGCTCCTAATTTGCAATTGTTTGCTCAACATCCGGGCCTTAATCATCCGGTGTATGGTGGATATGGGAGTCCAGCTTTGGGAGGTGGTATGTTGAACCAGGGAGTAGTTCCCATGAGTCAAGTGGGTTTGGTTGGTAGTTCAGTTGGGGCTGGGATTGGCTTGAGTGGTTACAGTGGGGGGTCGTATGGCTTAAGCCAATTAAGTGCTGGTGGTTCGTCATTGCTAGGCTCTTATGGGCCTGGTTCGTCATCGTTGAAGGGGTTGCCGCACATTTACTCAAGCACAATGCTCGGTAAGACGGTTTCTGAATCGGGTCAGGCGGCTGCTGGTGGGTCTCTCGGAGGATACACGTCACACTTGTGGTATGAAATGTTTCATATTCTTTTTATTTACTGCACTTCTACCATTTAAATGTTTCAACTTTTCTGCATATCATTAATTACAGTGATAGGTAGTATATAGATTATTGATGGGTACTGTTAAGAACTTAAGACTGTCATCAACAAAAGCCTGCGTGTATAATTGTGACTTAGATGATTGATATATGAAATACCTAGGATGGCCAATGGCCATTAGGAGGTAATTCTGAGAATTTGTAATTCATGAAGTGGCAATCAAATCCTTTCGAAATAAATAAATAACTCATGTGGTAATCAAACTACTTTAGCAATGAATAAAAATGCTCTTCTTAAAAGGTAGTCATGACCTCTGGCCAAGGCAGCTTTATTTAATACTTCACACATATTATCTTTGTTTATGTTTATGACATCGGGTAGAGTTTTCAAAGTACTTGGAAAGGAATTGGTAGGGACTTCTTTGAAAAGAGTTGGGTAAAGAAGGAGGTTTATGAATTTTGTTTAGTAAACTAGAGGAGGATGGCTTGTTGCTGTGGTATGCAAGAGGTTTTAGGAGAGATAATGTTTACAGGGTGCTGGTAGATGCGACTCCTATTATAGTAAAAGTTTAGGCTTAACAGCCAGCAAGTGTATCGATTTAGAAAAATGACGTTGAAACTGATTTATTGGAAGACCAAAATTTCTGCTTGATTGACTAAAAACCCATCCAAATGGATTGCTAAGCTTACAAGAACAGAATCAAATTGACCAAATAAACCTGATTTGTTATACTTATACCTAACAAATTTTGGTTATGAAGTTGCATCTGCGGCTCTGCCAATAAAGTCTTGTAATGGGTTACCTTGTTCTTGAGATCTGTGCCAATACATCCTTTCTATCTTGAGGGAAAACAATTCTTAGTAGCTCAAAGTTATTTTGAACGAACATGGGAGCCAGGATTTGGGATGTTAAATAATAACTACCGCTCTTAATAGGACCTTGAATGCTCATTGGAGTTCCCATTACCAAAGGCAGTCCGGTGGTTTAAGAGATGCATCCTCCTATAAGATATACGAGGAGGATGTTTGATGTAGTATGAATACCTTTTGTTCTCTTTTATGTACATCAATCACCTCTCATATTATTGAAAAACTATCAACAGTTACTGGACTTTTGAGAAATAGCACCGGCTTGCCTTTATTTTGTTGATTGCCCAACAATGTGTATTGTCTATTGTGTACACAAGGGAGTCCACTGTCTTAGGGAAATAGAAACTAATTATATTAGTTTCCTTTCTACCAAAGTAAAAAAAAAAAAAAAAGATTACCTAGGCAAAACTTAATAGCTAATTGAAATAAAATACAAGACAATAACAATGTAATTCTGTAACAACCTACGTCAAGCTGAGAGAGTGGGGCTAGAGGGATATGTCTTTTGGTTTTGCCATTGTTGGGTAGTAAGGGATTTAGAACGCCTAAGAAGGTGTGATTGCTTAAGTTGGCTCAAGGCATGGTCTGGGATAACTACCAAAGTGGACCTCAAGGAAGTGGAGGGTAGGTATGGCAGCAATGTGCATGGTTGAACTTGAGACTTCTATAGCTATGGTGAATCTGGACACTTGTAGAGTATGCACTGTGTCCTTTGATCTTGTAAATTGGTGACTGTGTTTTATTTGTTTCCATCCACTATCTCACTTTTGATCTAATGGGTCTTTGAGCGGGGTCTGTCAGGTGTTCTGATACAGGGATCTAATGGGTTTTTGACCTGGGTCTGTTGGGGATATATCTGTGATCCTTAGGAGGAGATGATTATTGGGACAAGAACAAAAGAAAATTCAAGATAGAAAGATGTATTGGAAGGATGTTCAAAGGGGACTCTATTAATGCCTCTCTCTTGTATTTCTTTATTTTCTTCCAATAAATTTTTCAGTCTTTTTCCTCCCTTTCCTTTTAAGTAACAGTTGGAGCTCTTTTTCGAAGTGTTTTTTTGAGTCTTTTCATTGCTCTTTTTCGGTTGGTTTGACCTTCTTTATCCTTTCCTTCTTTTTTTACCCTTATTGTACATACGCACATCTAGAAGCAAACATCCAAATGCCGAGCGACCTCAAACTGATTCTTTATTGATCCTTTTGAAATGACATTTTTTATAATAAACTTTAAAGTGTTTGTTAAAAATTAAAATCAACTTATTTTCAATTTTATTGGTCACCAAATATTGCAAGTTTTAGGAAAAGAACACTTGTAGCCATCTAAATCACTAAAGCCCCCCTCTGATGACTATTTAGTTTTTGAAAATTGTGTTTGTTTTCTCACTACTTTTCTATGGTTTTCATCTCTTATTGATGTAATTACAAACACAAACACTAACTCTACTACAACTTATTTTTTACTTTGCTAACAGCTGGGTCAGTATCTTGTAATTTGAATAATATTAGAATTTTAGGTTTGTAAAAAAGTTGCCGTTTGAGCACTGGGAAGTTGGCCAATTTAAAGCTCCTCTCCTCCATCTCAATTTTGAATAATATACCCAGAAGTATTTCTTTGAAATCAGATTCTCCAAGATGAGATTCATCACTTATATTTTATATATTTTTTTATTCTATGGCAGATTTCAAAAACAAAATCATTTTTTTTAAAACTACGGGCTTGTTTCATTTCCTGTTTTTGGTTTTTGATTTTTAGTTCTTAAAAAATAGGTGTGTTTGGTAACTAATTCACTTTGTTTGTTTTTAAAACAAGAAATTTGTTTTTTAAGTTAGGAAGGAAAACTGAAAATGTAAAAAGAAGGATTTTGTTTTTAAATCAGTCACCTAATATTTATGGTTTTTGTTTTTAATAAACCAAAGTTTAAAAACGGAATTTAATAAACAGAAAAAACAAAAACCATAAACTGAAATGGTAACTGAATGGGGCCTACATCTTTTTTCGTAATATTTAAAAAGTATGGCTTGATTTTAAAAAAACTCAAAGTAGAAGGAAGTAGTGTTTACAAATTTAATTCTCAAAAACGAAATGTTTTTCAAAATAGGCCTAACACATCCTAAGACTTAATAGCTATCCTCAAGCTTAAAGCATCTTTACCCTAATTGCTTCACCATGCAAACTCGAAAGAAACTTATCCCTTGTTTCACTCGTGTTCTTAGATCTTCTTCTCACCTAATTTGATTTTTTATCATGTTTTCATTTATTTTCCAATAGAATTTGCCTTGTCTTCCAATGATTTGAAAAGTGTTATCAGGTTGAAATTGTGTTTTTCTTTTGACTTGTACCGACCAGAAAACAATTCATCAAAATTTTATTTTATTTATTTATGAATTATTATGTTTCCTGATGGTCACAAATACTGAAATCTATCCCATCGGATGGTGCTTGTCTTTTAATTTTGAGCCAGTTTGGTTCAGTCTTTTAATTGCCGACTTAGTCACTTTCCCATCCTTCTCAATTATTAATTTGGATTTTTTTGGCACATTTCACTGAATTTGTTTTTGTACTTTCTTTTGATGATCGTTCTTTTGCTATGCTTTTTCTGATTAGATGGGTTTGGGGAACTTGTTGATTTTGTTGTATTTCAGTCAACAATAATAATGCGGATGTGTTTTTGGTTTTTGGTCTTTTACTTTTATTATTTTATTTTATTTTTCTTTTTTTCTATCTTTGATTTCTTGTTTCATTTTTCTTATTTGAATCTTCAACTTCATTGTTTTGATGGGAGTATTCATTTGACAGGCCAGATTATTAGTTTGCGTTGTCTTATTTCTTTTAGATGCTTGGGAATCCATATTTGCGTTTGAGGTGCTGCTGAACTTGTGGATGAATGATCCTGTACTTTTGGGAGAGTTTATGTTAAGAGCTTCATTTGGGCTAATTTGGCTTTGATACCTTTTCCAACAAACCCTTTTCGTTTCCTCTTACCGTTTTTCCTTTTCTTTCTTTTTCTTTTTTTTCCTTTTTTCCCTTTACTTTTCTTCTTTCCACCCCTCGTTTTAGTTTTATGTAGTAAGGACCTGCTGATTGGCACCAGCCTTGTGTTTTATACTTCACTTTTGTCAATATTATCATTTTTAATCTTTTTAAAGTTTC

mRNA sequence

ATGGAGGGAACCAACAAAACCGCCAAAAGAAAGCTGGTCAAGAAATCTGAAAACAAGGTCGATAAGAAACTCAAGAAAGAGCTTGAACATAACGTTCAGTCTCAACCAGTCGACGACGTCTCCGACTCCGATTTCGACGATCTTCCCAAACTCCTCGAACCCTTCTCCAAGACCCAATTAATTGAGCTCATTTGCACCACCGCTCTCAAAGACCCAAATCTTCAAGCCCAAATTCGAGCTGCTGCCGACCGCGATGTTACTCACCGCAAGATATTTGTCCATGGCCTCGGTTGGGACACCACCCGAGAAACCCTAACTTCGGTTTTTGAATCTTTTGGTGAAATTGAAGATTGCAATGTGGTTATGGACAGAAACACAGGTAAGGCTAAGGGATATGGGTTTATTTTGTTCAAATCCCGGCAAGGTGCAATTAAGGCGTTGAAGGAACCTAGGAAGAAGATTAATAACCGGATGACTTCGTGTCAATTGGCTTCTGTGGGTTCAGTGCCGCCCCCGCAAAGCCAGGAGGTTGGGCCGCGGAAGATTTATGTGGCTAATGTGCACCATAATGTGGATGCTGAGAGGCTTAGGGCGTTCTTTGCGAAATTTGGAGACTTAGAGATGGGTCCGATTGGGTTCGATCCCGAGACAGGGAAATCGAGGGGTTATGCCATTTTTATTTATAGAACGAATGAAGGTGCGAGGAAGGCTCTTGAGGAACCACACAAAGTGTTTGAAGGGAACAAATTGCACTGCCAGAGGGCGTCTGAGGGGAAGAACAAGAATCAAAATTCCACACAGGCAGCGGAAAGCTTAGGGCAGAATCAGACGCCGGTTATGGCGGCAATGGCCGCAGCTCCTAATTTGCAATTGTTTGCTCAACATCCGGGCCTTAATCATCCGGTGTATGGTGGATATGGGAGTCCAGCTTTGGGAGGTGGTATGTTGAACCAGGGAGTAGTTCCCATGAGTCAAGTGGGTTTGGTTGGTAGTTCAGTTGGGGCTGGGATTGGCTTGAGTGGTTACAGTGGGGGGTCGTATGGCTTAAGCCAATTAAGTGCTGGTGGTTCGTCATTGCTAGGCTCTTATGGGCCTGGTTCGTCATCGTTGAAGGGGTTGCCGCACATTTACTCAAGCACAATGCTCGGTAAGACGGTTTCTGAATCGGGTCAGGCGGCTGCTGGTGGGTCTCTCGGAGGATACACGTCACACTTGTGA

Coding sequence (CDS)

ATGGAGGGAACCAACAAAACCGCCAAAAGAAAGCTGGTCAAGAAATCTGAAAACAAGGTCGATAAGAAACTCAAGAAAGAGCTTGAACATAACGTTCAGTCTCAACCAGTCGACGACGTCTCCGACTCCGATTTCGACGATCTTCCCAAACTCCTCGAACCCTTCTCCAAGACCCAATTAATTGAGCTCATTTGCACCACCGCTCTCAAAGACCCAAATCTTCAAGCCCAAATTCGAGCTGCTGCCGACCGCGATGTTACTCACCGCAAGATATTTGTCCATGGCCTCGGTTGGGACACCACCCGAGAAACCCTAACTTCGGTTTTTGAATCTTTTGGTGAAATTGAAGATTGCAATGTGGTTATGGACAGAAACACAGGTAAGGCTAAGGGATATGGGTTTATTTTGTTCAAATCCCGGCAAGGTGCAATTAAGGCGTTGAAGGAACCTAGGAAGAAGATTAATAACCGGATGACTTCGTGTCAATTGGCTTCTGTGGGTTCAGTGCCGCCCCCGCAAAGCCAGGAGGTTGGGCCGCGGAAGATTTATGTGGCTAATGTGCACCATAATGTGGATGCTGAGAGGCTTAGGGCGTTCTTTGCGAAATTTGGAGACTTAGAGATGGGTCCGATTGGGTTCGATCCCGAGACAGGGAAATCGAGGGGTTATGCCATTTTTATTTATAGAACGAATGAAGGTGCGAGGAAGGCTCTTGAGGAACCACACAAAGTGTTTGAAGGGAACAAATTGCACTGCCAGAGGGCGTCTGAGGGGAAGAACAAGAATCAAAATTCCACACAGGCAGCGGAAAGCTTAGGGCAGAATCAGACGCCGGTTATGGCGGCAATGGCCGCAGCTCCTAATTTGCAATTGTTTGCTCAACATCCGGGCCTTAATCATCCGGTGTATGGTGGATATGGGAGTCCAGCTTTGGGAGGTGGTATGTTGAACCAGGGAGTAGTTCCCATGAGTCAAGTGGGTTTGGTTGGTAGTTCAGTTGGGGCTGGGATTGGCTTGAGTGGTTACAGTGGGGGGTCGTATGGCTTAAGCCAATTAAGTGCTGGTGGTTCGTCATTGCTAGGCTCTTATGGGCCTGGTTCGTCATCGTTGAAGGGGTTGCCGCACATTTACTCAAGCACAATGCTCGGTAAGACGGTTTCTGAATCGGGTCAGGCGGCTGCTGGTGGGTCTCTCGGAGGATACACGTCACACTTGTGA

Homology

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BLAST of CSPI04G04810 vs. Swiss-Prot
Match: UBA2B_ARATH (UBP1-associated protein 2B OS=Arabidopsis thaliana GN=UBA2B PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 6.1e-62
Identity = 155/402 (38.56%), Postives = 223/402 (55.47%), Query Frame = 1


Query: 11  KLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQLIELICTTALK 70
           K + + E K +  ++ E      +Q  +D  D + + +  LLEPFSK QL+ L+   A +
Sbjct: 52  KEMHEEEAKGEDNIEAETSSGSGNQGNED--DDEEEPIEDLLEPFSKDQLLILLKEAAER 111

Query: 71  DPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNVVMDRNTGKAK 130
             ++  +IR  AD D+ HRKIFVHGLGWDT  ++L   F+ +GEIEDC  V+D+ +G++K
Sbjct: 112 HRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSK 171

Query: 131 GYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGS------VPPPQ--SQEVGPRKI 190
           GYGFILFKSR GA  ALK+P+KKI  RMT+CQLAS+G       V P Q  + E   RKI
Sbjct: 172 GYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQGNPVVAPAQHFNPENVQRKI 231

Query: 191 YVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEEPH 250
           YV+NV  ++D ++L  FF++FG++E GP+G D  TG+ +G+A+F+YR+ E A+KALEEPH
Sbjct: 232 YVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAKKALEEPH 291

Query: 251 KVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNHPV 310
           K FEG+ LHC +A++G  + +       S  QN                + ++    +  
Sbjct: 292 KTFEGHVLHCHKANDGPKQVKQHQHNHNSHNQNSR--------------YQRNDNNGYGA 351

Query: 311 YGGYGSPALGGGMLNQGVVPMSQVGLVG--SSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 370
            GG+G    G     Q   P     L    +S GAG+GL+             A G +LL
Sbjct: 352 PGGHGHFIAGNNQAVQAFNPAIGQALTALLASQGAGLGLN------------QAFGQALL 411

Query: 371 GSYGPGS-SSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGY 402
           G+ G  S  ++ G+P  Y +          G  A  G  GGY
Sbjct: 412 GTLGTASPGAVGGMPSGYGTQANISPGVYPGYGAQAGYQGGY 425

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BLAST of CSPI04G04810 vs. Swiss-Prot
Match: UBA2A_ARATH (UBP1-associated protein 2A OS=Arabidopsis thaliana GN=UBA2A PE=1 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 4.8e-59
Identity = 150/379 (39.58%), Postives = 206/379 (54.35%), Query Frame = 1


Query: 42  DSDFDDLPKLLEPFSKTQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTT 101
           D D + +  LLEPFSK Q++ L+   A K  ++  +IR  AD D  HRKIFVHGLGWDT 
Sbjct: 93  DDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTK 152

Query: 102 RETLTSVFESFGEIEDCNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSC 161
            ETL   F+ +GEIEDC  V D+ +GK+KGYGFIL+KSR GA  ALK+P+KKI +RMT+C
Sbjct: 153 TETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTAC 212

Query: 162 QLASVGSV------------PPPQ--SQEVGPRKIYVANVHHNVDAERLRAFFAKFGDLE 221
           QLAS G V             P Q  + E   +KIYV+NV   +D ++L  FF+KFG++E
Sbjct: 213 QLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIE 272

Query: 222 MGPIGFDPETGKSRGYAIFIYRTNEGARKALEEPHKVFEGNKLHCQRASEGKNKNQNSTQ 281
            GP+G D  TG+ +G+ +F+Y+++E A++ALEEPHK FEG+ LHCQ+A +G    +    
Sbjct: 273 EGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGPKPGKQQQH 332

Query: 282 AAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNHPVYGGYGSPALGGGMLNQGVV-----P 341
                  N                   +P        GYG P  G G L  G       P
Sbjct: 333 HHNPHAYN-------------------NPRYQRNDNNGYGPPG-GHGHLMAGNPAGMGGP 392

Query: 342 MSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLLGSYGPGSSSLKGLPHIYSSTML 401
            +QV  +  ++G  +     S G+ GL+   A G +LLGS G  +        +     +
Sbjct: 393 TAQV--INPAIGQALTALLASQGA-GLAFNPAIGQALLGSLGTAAG-------VNPGNGV 441

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BLAST of CSPI04G04810 vs. Swiss-Prot
Match: UBA2C_ARATH (UBP1-associated protein 2C OS=Arabidopsis thaliana GN=UBA2C PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.8e-50
Identity = 126/325 (38.77%), Postives = 185/325 (56.92%), Query Frame = 1


Query: 47  DLPKLLEPFSKTQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLT 106
           D  K++E F+  QL++L+    ++ P++   +R  AD D++ RK+F+ GL  DTT E L 
Sbjct: 33  DARKIIERFTTDQLLDLLQEAIVRHPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLR 92

Query: 107 SVFESFGEIEDCNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASV 166
           S+F S+G++E+  V++D+ TGK+KGYGF+ F    GA+ ALKEP KKI+ R+T  QLA+ 
Sbjct: 93  SLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQLAAS 152

Query: 167 GSV-PPPQSQEVGPRKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAI 226
           G+     Q  ++  RKIYVANV  ++ A+RL   F  +GD+E GP+GFD  TGKSRG+A+
Sbjct: 153 GNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFAL 212

Query: 227 FIYRTNEGARKALEEPHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAA 286
           F+Y+T EGA+ AL +P KV +G  L+C+ A +GK   +     A+  G     V      
Sbjct: 213 FVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKKGGKPGMPQAQDGGSGHGHV------ 272

Query: 287 APNLQLFAQHPGLNHPV--YGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYS 346
                   +  G+  P   YG  G  +  GG    G  P   +    SS+  G+G +GY 
Sbjct: 273 ------HGEGMGMVRPAGPYGAAGGISAYGGY--SGGPPAHHMNSTHSSM--GVGSAGYG 332

Query: 347 G--GSYGLSQLSAGGSSLLGSYGPG 367
           G  G YG      GG+ + G  G G
Sbjct: 333 GHYGGYG----GPGGTGVYGGLGGG 337

[Close]

BLAST of CSPI04G04810 vs. Swiss-Prot
Match: UBA1A_ARATH (UBP1-associated proteins 1A OS=Arabidopsis thaliana GN=UBA1A PE=1 SV=2)

HSP 1 Score: 169.9 bits (429), Expect = 5.9e-41
Identity = 94/198 (47.47%), Postives = 134/198 (67.68%), Query Frame = 1


Query: 5   NKTAKRKLVKKSENKVDKKLK--KELEHNVQSQPV----------DDVSDSDFD--DLPK 64
           +K+ KRKLVK      DKK K  K+ +    S P           D  SD++FD  +L +
Sbjct: 6   DKSKKRKLVKSKSTNFDKKQKINKQQQQPESSTPYSSSSSSSDSSDSESDNEFDPEELRE 65

Query: 65  LLEPFSKTQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFE 124
           LL+P+SK QL++L+C+ +    ++ + +  AADRDVTHRKIFV+GL W+TTRETL  VFE
Sbjct: 66  LLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFE 125

Query: 125 SFGEIEDCNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVP 184
            +GEIE+C VV+D+ TGKAKG+GF++FK+R+GA +ALKEP+K+I NR  +CQLAS+G   
Sbjct: 126 GYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLASMGPAA 185

Query: 185 PPQS-QEVGPRKIYVANV 188
             +   + GP KI + ++
Sbjct: 186 SGKGHDQPGPVKISMGSM 203

[Close]

BLAST of CSPI04G04810 vs. Swiss-Prot
Match: UBA1C_ARATH (UBP1-associated proteins 1C OS=Arabidopsis thaliana GN=UBA1C PE=3 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 5.9e-33
Identity = 82/179 (45.81%), Postives = 116/179 (64.80%), Query Frame = 1


Query: 1   MEGTNKTAKRKLVK----------KSENKVDKKLKKELEHNVQSQPVDDVSDSDFD---- 60
           +E  ++T KR++V+          KSE+K  KK  KE +     +     SDSDF+    
Sbjct: 308 LETCDETWKREVVQAEEAKGGGEQKSESKKAKKQDKEKKRKKDKKQTK--SDSDFEHDKE 367

Query: 61  DLPKLLEPFSKTQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLT 120
           D+ +LL  +SK +L+ LI  TA K   L + I  +ADRD+  R IFV G GWDTT+E L 
Sbjct: 368 DIKQLLVAYSKEELVNLIYKTAEKGSRLISAILESADRDIAQRNIFVRGFGWDTTQENLK 427

Query: 121 SVFESFGEIEDCNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLAS 166
           + FES+GEIE+C+VVMD++TG+ KGYGF++FK+R+GA +ALK P K++ NR+  C LAS
Sbjct: 428 TAFESYGEIEECSVVMDKDTGRGKGYGFVMFKTRKGAREALKRPEKRMYNRIVVCNLAS 484

[Close]

BLAST of CSPI04G04810 vs. TrEMBL
Match: A0A0A0KXV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G031080 PE=4 SV=1)

HSP 1 Score: 787.7 bits (2033), Expect = 6.6e-225
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 1


Query: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60
           MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60

Query: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120
           IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV
Sbjct: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120

Query: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180
           VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR
Sbjct: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180

Query: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240
           KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE
Sbjct: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240

Query: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300
           PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH
Sbjct: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300

Query: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360
           PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL
Sbjct: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360

Query: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 406
           GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL
Sbjct: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 405

[Close]

BLAST of CSPI04G04810 vs. TrEMBL
Match: F6H4P1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01290 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 4.3e-99
Identity = 218/397 (54.91%), Postives = 272/397 (68.51%), Query Frame = 1


Query: 1   MEGTNKTAKRKLVKKSENKVDKKLK-KELEHNVQSQPVDDVSDSD--FDDLPKLLEPFSK 60
           M  T K+ K+KL KK+  K++KKLK K++E  + ++P D  SDSD  FD L KLLEP+SK
Sbjct: 1   MAKTKKSKKQKLTKKTPKKIEKKLKSKKVEKALATKPSDSDSDSDSGFDKLQKLLEPYSK 60

Query: 61  TQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIED 120
            QLI  I   A  D +L  +IR  ADRDV+HRKIFVHGLGWDTTRETL + FE +G+IED
Sbjct: 61  DQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAAFEPYGQIED 120

Query: 121 CNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEV 180
           CNVV DRNTGKAKGYGF+LFK+RQGA+KALK+P KKINNRMT  QLAS+G  PPPQSQ+ 
Sbjct: 121 CNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLASMGPSPPPQSQDT 180

Query: 181 GPRKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKA 240
             RKIYV+NV  +VD ERLR+FFAKFG++E GPIGFD +TGKSRG+A+F+Y+  E ARKA
Sbjct: 181 VGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGFALFVYKNQESARKA 240

Query: 241 LEEPHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPG 300
           LE+P+++FEG++LHCQ+A+EGKNK     Q          P +AA+AA  N  L +QHP 
Sbjct: 241 LEDPYRIFEGHQLHCQKATEGKNKVPAQPQ----------PQLAAVAATQNFML-SQHPT 300

Query: 301 LN--------HPVYGGYGSPALG---GGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGS 360
           LN        HP     G+ A+     G +N GV+  SQ   VGS +G+  GL GY  G+
Sbjct: 301 LNTLYSGLLAHPNASMIGAAAVNPAVAGAMNPGVISSSQ---VGSVIGSVEGLGGY--GT 360

Query: 361 YGLSQLSAGGSSLLGSYGPGSSSLKGLPHIYSSTMLG 384
           +G++      S L    GP S    GL H Y ST LG
Sbjct: 361 HGVAGFGGTPSVL----GPPS---LGLQHAYPSTQLG 374

[Close]

BLAST of CSPI04G04810 vs. TrEMBL
Match: A0A067KSI9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09364 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 5.7e-91
Identity = 196/370 (52.97%), Postives = 248/370 (67.03%), Query Frame = 1


Query: 42  DSDFDDLPKLLEPFSKTQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTT 101
           DSD  D+P LLEP++K QLIELI   A  +P++   I   ADRD +HRKIFVHG  WDTT
Sbjct: 73  DSDPVDIPTLLEPYTKEQLIELISIAATNNPSIYPLINEHADRDASHRKIFVHGFTWDTT 132

Query: 102 RETLTSVFESFGEIEDCNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSC 161
           RE + S FE FGEIE+CNVV D+ TGKAKGYGF+LFK+R+GA  ALK+P+K INNR  SC
Sbjct: 133 RENVLSAFEPFGEIEECNVVTDKVTGKAKGYGFVLFKTRKGAAMALKDPKKNINNRFASC 192

Query: 162 QLASVG-SVPPPQSQEVGPRKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKS 221
           QLAS+G +    + QEVG RKIYV+NV  N D E+L+AF AKFG++E GPIGFD ETG+S
Sbjct: 193 QLASIGPAANVGKDQEVGARKIYVSNVQVNADKEKLKAFLAKFGEIESGPIGFDKETGRS 252

Query: 222 RGYAIFIYRTNEGARKALEEPHKVFEGNKLHCQRASEGKNK-NQNSTQAAESL-GQNQTP 281
           RGYA+F+Y+T EGA++ALEEPHK+FEG +LHC  A+EGKNK NQ   Q  + +  Q+Q  
Sbjct: 253 RGYALFVYKTVEGAKRALEEPHKMFEGQQLHCSIATEGKNKTNQVQMQQQQQVKQQSQDQ 312

Query: 282 VMAAMAAAPNLQLFAQHPGLNHPVYGGYGS---PALGGGMLNQGVVPMSQVGLVGSSVGA 341
           ++AA+AAA NL LF Q PG+N PVYGG  S    A   GM+N  +V      LV +S   
Sbjct: 313 MLAAVAAAQNLALFGQQPGIN-PVYGGLLSNPAAAAPAGMINPLMVGAVSQSLVPTSQIG 372

Query: 342 GIGLSGYSGGSYGLSQLSAGGSSLLGSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAG 401
           G+GL+                 S+LG+YG G    +GL H+YS+T  G+     GQ   G
Sbjct: 373 GLGLA---------------TQSVLGTYGAG----RGLQHVYSNTQTGQGGVGRGQ-GLG 421

Query: 402 GSLGGYTSHL 406
            S  GY  ++
Sbjct: 433 SSFAGYPPYM 421

[Close]

BLAST of CSPI04G04810 vs. TrEMBL
Match: A5BLC5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028295 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.1e-89
Identity = 213/419 (50.84%), Postives = 265/419 (63.25%), Query Frame = 1


Query: 1   MEGTNKTAKRKLVKKSENKVDKKLK-KELEHNVQSQPVDDVSDSD--FDDLPKLLEPFSK 60
           M  T K+ K+KL KK+  K++KKLK K++E  + ++P D  SDSD  FD L KLLEP+SK
Sbjct: 1   MAKTKKSKKQKLTKKTPKKIEKKLKSKKVEKALATKPSDSDSDSDSGFDKLQKLLEPYSK 60

Query: 61  TQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIED 120
            QLI  I   A  D +L  +IR  ADRDV+HRKIFVHGLGWDTTRETL + FE +G+IED
Sbjct: 61  DQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAAFEPYGQIED 120

Query: 121 CNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEV 180
           CNVV DRNTGKAKGYGF+LFK+RQGA+KALK+P KKINNRMT  QLAS+G  PPPQSQ+ 
Sbjct: 121 CNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLASMGPSPPPQSQDT 180

Query: 181 GPRKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKA 240
             RKIYV+NV  +VD ERLR+FFAKFG++E GPIGFD +TGKSRG               
Sbjct: 181 VGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRG--------------- 240

Query: 241 LEEPHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPG 300
                 +FEG++LHCQ+A+EGKNK     Q          P +AA+AA  N  L +QHP 
Sbjct: 241 ------IFEGHQLHCQKATEGKNKVPAQPQ----------PQLAAVAATQNFML-SQHPT 300

Query: 301 LN--------HPVYGGYGSPALG---GGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGS 360
           LN        HP     G+ A+     G +N GV+  SQ   VGS +G+  GL GY  G+
Sbjct: 301 LNTLYSGLLAHPNASMIGAAAVNPAVAGAMNPGVISSSQ---VGSVIGSVEGLGGY--GT 360

Query: 361 YGLSQLSAGGSSLLGSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 406
           +G++      S L    GP S    GL H Y ST LG++     Q    G+ GGY S++
Sbjct: 361 HGVAGFGGTPSVL----GPPS---LGLQHAYPSTQLGQSSVGRVQGTGVGTFGGYPSYM 375

[Close]

BLAST of CSPI04G04810 vs. TrEMBL
Match: A0A103YGE5_CYNCS (Nucleotide-binding, alpha-beta plait OS=Cynara cardunculus var. scolymus GN=Ccrd_013047 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 9.0e-89
Identity = 209/425 (49.18%), Postives = 276/425 (64.94%), Query Frame = 1


Query: 9   KRKLVKKSENKVDKKL-KKELEHNVQS----------QPVDDVSDSDFDD-----LPKLL 68
           K K+ KK +N   KK+ K + + N+            Q  DD SDSD +D     + KL+
Sbjct: 8   KPKVAKKPDNVNKKKIVKTKKKKNIAERSIIPKTSAIQAADDSSDSDGEDYSPEQIQKLI 67

Query: 69  EPFSKTQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESF 128
           EP++K QLIE I   A+ +P+L  +IR AAD DV+HRKIFV+GLGWDTT+ETLT  F+ +
Sbjct: 68  EPYTKDQLIEFIINAAIANPSLYTRIRDAADSDVSHRKIFVYGLGWDTTKETLTLAFKPY 127

Query: 129 GEIEDCNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPP 188
           GEIEDCNV++DR TGKAKG+GF+ F+SR+GA+KAL+EP+KKINNRM SCQLAS+G     
Sbjct: 128 GEIEDCNVIIDRVTGKAKGFGFVQFRSRKGAMKALEEPKKKINNRMASCQLASLGPA-VA 187

Query: 189 QSQEVGPRKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNE 248
            S +   RKIYV+NV  + D ERLRAFF+KFG++E GP+GFD  TGKSRG+A+F+Y+  E
Sbjct: 188 GSMDNSNRKIYVSNVQPHADPERLRAFFSKFGEIETGPLGFDTSTGKSRGFALFVYKNQE 247

Query: 249 GARKALEEPHKVFEGNKLHCQRASEGKNKNQNST---QAAESLGQNQTP-VMAAMAAAPN 308
           G RKALEEP+KVFEG++LHCQ+A++GKNK   ++        + Q  TP ++AA+AA  N
Sbjct: 248 GFRKALEEPYKVFEGHQLHCQKAADGKNKGTATSAPVTVTTPVVQQPTPQMLAAVAATQN 307

Query: 309 LQLFAQ-HPGLNHPVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGL-SGYSGGS 368
             LF+Q H GLN P+YGG  S    G +    +     +G +G+  GA  GL S Y+G S
Sbjct: 308 FGLFSQSHLGLN-PMYGGLFSNPNAGFLAANPLYASGVLGQMGAVGGAPAGLGSYYAGAS 367

Query: 369 YGLSQLSAGGSSLLGSYGPGSSSL---KGLPHIYSSTMLG---KTVSESGQAAAGGSLGG 406
           +GLS +     SLLG YG  +  +    GL   Y    +G    + S S    AGGS  G
Sbjct: 368 HGLS-MGVDNGSLLGEYGGATLPVIQGLGLQSSYPKKKVGAASASASGSRSQGAGGSFSG 427

[Close]

BLAST of CSPI04G04810 vs. TAIR10
Match: AT2G41060.1 (AT2G41060.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 239.6 bits (610), Expect = 3.4e-63
Identity = 155/402 (38.56%), Postives = 223/402 (55.47%), Query Frame = 1


Query: 11  KLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQLIELICTTALK 70
           K + + E K +  ++ E      +Q  +D  D + + +  LLEPFSK QL+ L+   A +
Sbjct: 52  KEMHEEEAKGEDNIEAETSSGSGNQGNED--DDEEEPIEDLLEPFSKDQLLILLKEAAER 111

Query: 71  DPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNVVMDRNTGKAK 130
             ++  +IR  AD D+ HRKIFVHGLGWDT  ++L   F+ +GEIEDC  V+D+ +G++K
Sbjct: 112 HRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSK 171

Query: 131 GYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGS------VPPPQ--SQEVGPRKI 190
           GYGFILFKSR GA  ALK+P+KKI  RMT+CQLAS+G       V P Q  + E   RKI
Sbjct: 172 GYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQGNPVVAPAQHFNPENVQRKI 231

Query: 191 YVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEEPH 250
           YV+NV  ++D ++L  FF++FG++E GP+G D  TG+ +G+A+F+YR+ E A+KALEEPH
Sbjct: 232 YVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAKKALEEPH 291

Query: 251 KVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNHPV 310
           K FEG+ LHC +A++G  + +       S  QN                + ++    +  
Sbjct: 292 KTFEGHVLHCHKANDGPKQVKQHQHNHNSHNQNSR--------------YQRNDNNGYGA 351

Query: 311 YGGYGSPALGGGMLNQGVVPMSQVGLVG--SSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 370
            GG+G    G     Q   P     L    +S GAG+GL+             A G +LL
Sbjct: 352 PGGHGHFIAGNNQAVQAFNPAIGQALTALLASQGAGLGLN------------QAFGQALL 411

Query: 371 GSYGPGS-SSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGY 402
           G+ G  S  ++ G+P  Y +          G  A  G  GGY
Sbjct: 412 GTLGTASPGAVGGMPSGYGTQANISPGVYPGYGAQAGYQGGY 425

[Close]

BLAST of CSPI04G04810 vs. TAIR10
Match: AT3G56860.3 (AT3G56860.3 UBP1-associated protein 2A)

HSP 1 Score: 229.9 bits (585), Expect = 2.7e-60
Identity = 150/379 (39.58%), Postives = 206/379 (54.35%), Query Frame = 1


Query: 42  DSDFDDLPKLLEPFSKTQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTT 101
           D D + +  LLEPFSK Q++ L+   A K  ++  +IR  AD D  HRKIFVHGLGWDT 
Sbjct: 93  DDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTK 152

Query: 102 RETLTSVFESFGEIEDCNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSC 161
            ETL   F+ +GEIEDC  V D+ +GK+KGYGFIL+KSR GA  ALK+P+KKI +RMT+C
Sbjct: 153 TETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTAC 212

Query: 162 QLASVGSV------------PPPQ--SQEVGPRKIYVANVHHNVDAERLRAFFAKFGDLE 221
           QLAS G V             P Q  + E   +KIYV+NV   +D ++L  FF+KFG++E
Sbjct: 213 QLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIE 272

Query: 222 MGPIGFDPETGKSRGYAIFIYRTNEGARKALEEPHKVFEGNKLHCQRASEGKNKNQNSTQ 281
            GP+G D  TG+ +G+ +F+Y+++E A++ALEEPHK FEG+ LHCQ+A +G    +    
Sbjct: 273 EGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGPKPGKQQQH 332

Query: 282 AAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNHPVYGGYGSPALGGGMLNQGVV-----P 341
                  N                   +P        GYG P  G G L  G       P
Sbjct: 333 HHNPHAYN-------------------NPRYQRNDNNGYGPPG-GHGHLMAGNPAGMGGP 392

Query: 342 MSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLLGSYGPGSSSLKGLPHIYSSTML 401
            +QV  +  ++G  +     S G+ GL+   A G +LLGS G  +        +     +
Sbjct: 393 TAQV--INPAIGQALTALLASQGA-GLAFNPAIGQALLGSLGTAAG-------VNPGNGV 441

[Close]

BLAST of CSPI04G04810 vs. TAIR10
Match: AT3G15010.1 (AT3G15010.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 201.4 bits (511), Expect = 1.0e-51
Identity = 126/325 (38.77%), Postives = 185/325 (56.92%), Query Frame = 1


Query: 47  DLPKLLEPFSKTQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLT 106
           D  K++E F+  QL++L+    ++ P++   +R  AD D++ RK+F+ GL  DTT E L 
Sbjct: 33  DARKIIERFTTDQLLDLLQEAIVRHPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLR 92

Query: 107 SVFESFGEIEDCNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASV 166
           S+F S+G++E+  V++D+ TGK+KGYGF+ F    GA+ ALKEP KKI+ R+T  QLA+ 
Sbjct: 93  SLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQLAAS 152

Query: 167 GSV-PPPQSQEVGPRKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAI 226
           G+     Q  ++  RKIYVANV  ++ A+RL   F  +GD+E GP+GFD  TGKSRG+A+
Sbjct: 153 GNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFAL 212

Query: 227 FIYRTNEGARKALEEPHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAA 286
           F+Y+T EGA+ AL +P KV +G  L+C+ A +GK   +     A+  G     V      
Sbjct: 213 FVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKKGGKPGMPQAQDGGSGHGHV------ 272

Query: 287 APNLQLFAQHPGLNHPV--YGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYS 346
                   +  G+  P   YG  G  +  GG    G  P   +    SS+  G+G +GY 
Sbjct: 273 ------HGEGMGMVRPAGPYGAAGGISAYGGY--SGGPPAHHMNSTHSSM--GVGSAGYG 332

Query: 347 G--GSYGLSQLSAGGSSLLGSYGPG 367
           G  G YG      GG+ + G  G G
Sbjct: 333 GHYGGYG----GPGGTGVYGGLGGG 337

[Close]

BLAST of CSPI04G04810 vs. TAIR10
Match: AT2G22090.2 (AT2G22090.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 169.9 bits (429), Expect = 3.3e-42
Identity = 94/198 (47.47%), Postives = 134/198 (67.68%), Query Frame = 1


Query: 5   NKTAKRKLVKKSENKVDKKLK--KELEHNVQSQPV----------DDVSDSDFD--DLPK 64
           +K+ KRKLVK      DKK K  K+ +    S P           D  SD++FD  +L +
Sbjct: 6   DKSKKRKLVKSKSTNFDKKQKINKQQQQPESSTPYSSSSSSSDSSDSESDNEFDPEELRE 65

Query: 65  LLEPFSKTQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFE 124
           LL+P+SK QL++L+C+ +    ++ + +  AADRDVTHRKIFV+GL W+TTRETL  VFE
Sbjct: 66  LLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFE 125

Query: 125 SFGEIEDCNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVP 184
            +GEIE+C VV+D+ TGKAKG+GF++FK+R+GA +ALKEP+K+I NR  +CQLAS+G   
Sbjct: 126 GYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLASMGPAA 185

Query: 185 PPQS-QEVGPRKIYVANV 188
             +   + GP KI + ++
Sbjct: 186 SGKGHDQPGPVKISMGSM 203

[Close]

BLAST of CSPI04G04810 vs. TAIR10
Match: AT2G19380.1 (AT2G19380.1 RNA recognition motif (RRM)-containing protein)

HSP 1 Score: 143.3 bits (360), Expect = 3.3e-34
Identity = 82/179 (45.81%), Postives = 116/179 (64.80%), Query Frame = 1


Query: 1   MEGTNKTAKRKLVK----------KSENKVDKKLKKELEHNVQSQPVDDVSDSDFD---- 60
           +E  ++T KR++V+          KSE+K  KK  KE +     +     SDSDF+    
Sbjct: 308 LETCDETWKREVVQAEEAKGGGEQKSESKKAKKQDKEKKRKKDKKQTK--SDSDFEHDKE 367

Query: 61  DLPKLLEPFSKTQLIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLT 120
           D+ +LL  +SK +L+ LI  TA K   L + I  +ADRD+  R IFV G GWDTT+E L 
Sbjct: 368 DIKQLLVAYSKEELVNLIYKTAEKGSRLISAILESADRDIAQRNIFVRGFGWDTTQENLK 427

Query: 121 SVFESFGEIEDCNVVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLAS 166
           + FES+GEIE+C+VVMD++TG+ KGYGF++FK+R+GA +ALK P K++ NR+  C LAS
Sbjct: 428 TAFESYGEIEECSVVMDKDTGRGKGYGFVMFKTRKGAREALKRPEKRMYNRIVVCNLAS 484

[Close]

BLAST of CSPI04G04810 vs. NCBI nr
Match: gi|449462878|ref|XP_004149162.1| (PREDICTED: UBP1-associated protein 2B-like isoform X3 [Cucumis sativus])

HSP 1 Score: 787.7 bits (2033), Expect = 9.5e-225
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 1


Query: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60
           MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60

Query: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120
           IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV
Sbjct: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120

Query: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180
           VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR
Sbjct: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180

Query: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240
           KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE
Sbjct: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240

Query: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300
           PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH
Sbjct: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300

Query: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360
           PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL
Sbjct: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360

Query: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 406
           GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL
Sbjct: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 405

[Close]

BLAST of CSPI04G04810 vs. NCBI nr
Match: gi|778690498|ref|XP_011653132.1| (PREDICTED: UBP1-associated protein 2B-like isoform X2 [Cucumis sativus])

HSP 1 Score: 787.7 bits (2033), Expect = 9.5e-225
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 1


Query: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60
           MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60

Query: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120
           IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV
Sbjct: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120

Query: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180
           VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR
Sbjct: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180

Query: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240
           KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE
Sbjct: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240

Query: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300
           PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH
Sbjct: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300

Query: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360
           PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL
Sbjct: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360

Query: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 406
           GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL
Sbjct: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 405

[Close]

BLAST of CSPI04G04810 vs. NCBI nr
Match: gi|700198079|gb|KGN53237.1| (hypothetical protein Csa_4G031080 [Cucumis sativus])

HSP 1 Score: 787.7 bits (2033), Expect = 9.5e-225
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 1


Query: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60
           MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60

Query: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120
           IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV
Sbjct: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120

Query: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180
           VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR
Sbjct: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180

Query: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240
           KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE
Sbjct: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240

Query: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300
           PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH
Sbjct: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300

Query: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360
           PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL
Sbjct: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360

Query: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 406
           GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL
Sbjct: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 405

[Close]

BLAST of CSPI04G04810 vs. NCBI nr
Match: gi|778690495|ref|XP_011653131.1| (PREDICTED: UBP1-associated protein 2B-like isoform X1 [Cucumis sativus])

HSP 1 Score: 787.7 bits (2033), Expect = 9.5e-225
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 1


Query: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60
           MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60

Query: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120
           IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV
Sbjct: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120

Query: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180
           VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR
Sbjct: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180

Query: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240
           KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE
Sbjct: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240

Query: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300
           PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH
Sbjct: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300

Query: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360
           PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL
Sbjct: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLL 360

Query: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 406
           GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL
Sbjct: 361 GSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 405

[Close]

BLAST of CSPI04G04810 vs. NCBI nr
Match: gi|659107614|ref|XP_008453765.1| (PREDICTED: UBP1-associated protein 2B-like [Cucumis melo])

HSP 1 Score: 662.9 bits (1709), Expect = 3.5e-187
Identity = 339/345 (98.26%), Postives = 343/345 (99.42%), Query Frame = 1


Query: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDVSDSDFDDLPKLLEPFSKTQL 60
           MEGTNKTAKRKLVKKSENKVDKKLKKELE NVQSQP+DDVSDSDFDDLPKLLEPFSKTQL
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEDNVQSQPLDDVSDSDFDDLPKLLEPFSKTQL 60

Query: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120
           IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV
Sbjct: 61  IELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCNV 120

Query: 121 VMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180
           VMDRNTGKAKGYGF+LFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR
Sbjct: 121 VMDRNTGKAKGYGFVLFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGPR 180

Query: 181 KIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240
           KIYVANVHHNVDAERLRAFFAKFG+LEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE
Sbjct: 181 KIYVANVHHNVDAERLRAFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARKALEE 240

Query: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLNH 300
           PHKVFEGNKLHCQRASEGKNKNQNSTQAA+SLGQNQTPVMAAMAAAPNLQLFAQHPGLN 
Sbjct: 241 PHKVFEGNKLHCQRASEGKNKNQNSTQAAQSLGQNQTPVMAAMAAAPNLQLFAQHPGLN- 300

Query: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGG 346
           PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGG
Sbjct: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGG 344

The following BLAST results are available for this feature:

BLAST of CSPI04G04810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UBA2B_ARATH	6.1e-62	38.56	UBP1-associated protein 2B OS=Arabidopsis thaliana GN=UBA2B PE=2 SV=1	[more]
UBA2A_ARATH	4.8e-59	39.58	UBP1-associated protein 2A OS=Arabidopsis thaliana GN=UBA2A PE=1 SV=1	[more]
UBA2C_ARATH	1.8e-50	38.77	UBP1-associated protein 2C OS=Arabidopsis thaliana GN=UBA2C PE=2 SV=1	[more]
UBA1A_ARATH	5.9e-41	47.47	UBP1-associated proteins 1A OS=Arabidopsis thaliana GN=UBA1A PE=1 SV=2	[more]
UBA1C_ARATH	5.9e-33	45.81	UBP1-associated proteins 1C OS=Arabidopsis thaliana GN=UBA1C PE=3 SV=2	[more]

BLAST of CSPI04G04810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXV0_CUCSA	6.6e-225	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G031080 PE=4 SV=1	[more]
F6H4P1_VITVI	4.3e-99	54.91	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01290 PE=4 SV=...	[more]
A0A067KSI9_JATCU	5.7e-91	52.97	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09364 PE=4 SV=1	[more]
A5BLC5_VITVI	1.1e-89	50.84	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028295 PE=4 SV=1	[more]
A0A103YGE5_CYNCS	9.0e-89	49.18	Nucleotide-binding, alpha-beta plait OS=Cynara cardunculus var. scolymus GN=Ccrd...	[more]

BLAST of CSPI04G04810 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41060.1	3.4e-63	38.56	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G56860.3	2.7e-60	39.58	UBP1-associated protein 2A	[more]
AT3G15010.1	1.0e-51	38.77	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G22090.2	3.3e-42	47.47	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G19380.1	3.3e-34	45.81	RNA recognition motif (RRM)-containing protein	[more]

BLAST of CSPI04G04810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462878\|ref\|XP_004149162.1\|	9.5e-225	100.00	PREDICTED: UBP1-associated protein 2B-like isoform X3 [Cucumis sativus]	[more]
gi\|778690498\|ref\|XP_011653132.1\|	9.5e-225	100.00	PREDICTED: UBP1-associated protein 2B-like isoform X2 [Cucumis sativus]	[more]
gi\|700198079\|gb\|KGN53237.1\|	9.5e-225	100.00	hypothetical protein Csa_4G031080 [Cucumis sativus]	[more]
gi\|778690495\|ref\|XP_011653131.1\|	9.5e-225	100.00	PREDICTED: UBP1-associated protein 2B-like isoform X1 [Cucumis sativus]	[more]
gi\|659107614\|ref\|XP_008453765.1\|	3.5e-187	98.26	PREDICTED: UBP1-associated protein 2B-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G04810.1	CSPI04G04810.1	mRNA
CSPI04G04810.2	CSPI04G04810.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 91..157 score: 5.0E-16coord: 182..251 score: 1.5
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 181..253 score: 1.7E-14coord: 90..162 score: 2.5
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 180..257 score: 13.464coord: 89..189 score: 1
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 170..263 score: 2.4E-16coord: 78..164 score: 2.3
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 88..258 score: 3.78
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 62..262 score: 4.9E-83coord: 289..323 score: 4.9E-83coord: 395..406 score: 4.9
None	No IPR available	PANTHER	PTHR24012:SF397	OLIGOURIDYLATE-BINDING PROTEIN 1A-RELATED	coord: 289..323 score: 4.9E-83coord: 395..406 score: 4.9E-83coord: 62..262 score: 4.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G04810	Cla014500	Watermelon (97103) v1	cpiwmB313
CSPI04G04810	Csa4G031080	Cucumber (Chinese Long) v2	cpicuB182
CSPI04G04810	MELO3C017573	Melon (DHL92) v3.5.1	cpimeB310
CSPI04G04810	MELO3C020961	Melon (DHL92) v3.5.1	cpimeB267
CSPI04G04810	ClCG07G009360	Watermelon (Charleston Gray)	cpiwcgB342
CSPI04G04810	Lsi07G001850	Bottle gourd (USVL1VR-Ls)	cpilsiB303
CSPI04G04810	MELO3C017573.2	Melon (DHL92) v3.6.1	cpimedB301
CSPI04G04810	MELO3C020961.2	Melon (DHL92) v3.6.1	cpimedB263
CSPI04G04810	CsaV3_4G004880	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G04810	CsaV3_UNG186420	Cucumber (Chinese Long) v3	cpicucB238
CSPI04G04810	Bhi01G001914	Wax gourd	cpiwgoB378
CSPI04G04810	Cucsa.029400	Cucumber (Gy14) v1	cgycpiB001
CSPI04G04810	CmaCh04G007930	Cucurbita maxima (Rimu)	cmacpiB721
CSPI04G04810	CmaCh16G006710	Cucurbita maxima (Rimu)	cmacpiB342
CSPI04G04810	CmoCh16G007320	Cucurbita moschata (Rifu)	cmocpiB332
CSPI04G04810	CmoCh04G008510	Cucurbita moschata (Rifu)	cmocpiB715
CSPI04G04810	Cp4.1LG01g09540	Cucurbita pepo (Zucchini)	cpecpiB406
CSPI04G04810	Cp4.1LG14g01480	Cucurbita pepo (Zucchini)	cpecpiB223
CSPI04G04810	CsGy4G004720	Cucumber (Gy14) v2	cgybcpiB168
CSPI04G04810	Carg05786	Silver-seed gourd	carcpiB1057
CSPI04G04810	Carg14191	Silver-seed gourd	carcpiB0981

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G04810	Watermelon (97103) v1	cpiwmB333
CSPI04G04810	Watermelon (97103) v2	cpiwmbB273
CSPI04G04810	Watermelon (97103) v2	cpiwmbB332