Cp4.1LG14g00270 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g00270
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING finger protein
LocationCp4.1LG14 : 4464694 .. 4465254 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCCTCCACCTCTTAACCCTCCTCCTTCAATCCTCCCCTTCCTCACCTCCTTTTCGATCATAATCCTCATCTTCGTCTCCATTATCATCTTCTCCGTCCTCGCCTCCTTTGCCATCATCGTCCTCGTCTACTTCATTTGCAAGTACCTAGTTCGCCCAATTTATTTAGACGAACACGACCCTGAACTCGTAGTGGACGAGAGAAACCAAAACCAAAACCAGAACCAGAGCACACAAACTAGGATTTTGGTATCTCATCCAACGCGTCATGGTGGAGACGTAGAGAATGCATCATGGAGGGAGGATTTGGAGAGGAAGGGGCTGAGAGGACAAGCTCTAGAGAAGGCGACGACGACGGTGCCCGTGAGCTATGGCAGCTCGGAAGGGACGGCGAAATTCGTTGATTGTGCAATCTGTTTGGAGGATTTTGAAAAGGGAGAGCTTTGCCAGATTTTTCCAGTGTGTAATCATATTTTTCATTATTGTTGTATTCAACGTTGGTTGAAGAAGAACATGACTTGTCCCATTTGTCGTTGTTCTATTGTGAGTGAGAAGTGA

mRNA sequence

ATGATCCCTCCACCTCTTAACCCTCCTCCTTCAATCCTCCCCTTCCTCACCTCCTTTTCGATCATAATCCTCATCTTCGTCTCCATTATCATCTTCTCCGTCCTCGCCTCCTTTGCCATCATCGTCCTCGTCTACTTCATTTGCAAGTACCTAGTTCGCCCAATTTATTTAGACGAACACGACCCTGAACTCGTAGTGGACGAGAGAAACCAAAACCAAAACCAGAACCAGAGCACACAAACTAGGATTTTGGTATCTCATCCAACGCGTCATGGTGGAGACGTAGAGAATGCATCATGGAGGGAGGATTTGGAGAGGAAGGGGCTGAGAGGACAAGCTCTAGAGAAGGCGACGACGACGGTGCCCGTGAGCTATGGCAGCTCGGAAGGGACGGCGAAATTCGTTGATTGTGCAATCTGTTTGGAGGATTTTGAAAAGGGAGAGCTTTGCCAGATTTTTCCAGTGTGTAATCATATTTTTCATTATTGTTGTATTCAACGTTGGTTGAAGAAGAACATGACTTGTCCCATTTGTCGTTGTTCTATTGTGAGTGAGAAGTGA

Coding sequence (CDS)

ATGATCCCTCCACCTCTTAACCCTCCTCCTTCAATCCTCCCCTTCCTCACCTCCTTTTCGATCATAATCCTCATCTTCGTCTCCATTATCATCTTCTCCGTCCTCGCCTCCTTTGCCATCATCGTCCTCGTCTACTTCATTTGCAAGTACCTAGTTCGCCCAATTTATTTAGACGAACACGACCCTGAACTCGTAGTGGACGAGAGAAACCAAAACCAAAACCAGAACCAGAGCACACAAACTAGGATTTTGGTATCTCATCCAACGCGTCATGGTGGAGACGTAGAGAATGCATCATGGAGGGAGGATTTGGAGAGGAAGGGGCTGAGAGGACAAGCTCTAGAGAAGGCGACGACGACGGTGCCCGTGAGCTATGGCAGCTCGGAAGGGACGGCGAAATTCGTTGATTGTGCAATCTGTTTGGAGGATTTTGAAAAGGGAGAGCTTTGCCAGATTTTTCCAGTGTGTAATCATATTTTTCATTATTGTTGTATTCAACGTTGGTTGAAGAAGAACATGACTTGTCCCATTTGTCGTTGTTCTATTGTGAGTGAGAAGTGA

Protein sequence

MIPPPLNPPPSILPFLTSFSIIILIFVSIIIFSVLASFAIIVLVYFICKYLVRPIYLDEHDPELVVDERNQNQNQNQSTQTRILVSHPTRHGGDVENASWREDLERKGLRGQALEKATTTVPVSYGSSEGTAKFVDCAICLEDFEKGELCQIFPVCNHIFHYCCIQRWLKKNMTCPICRCSIVSEK
Homology
[Close]
BLAST of Cp4.1LG14g00270 vs. Swiss-Prot
Match: ATL72_ARATH (RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.2e-11
Identity = 36/80 (45.00%), Postives = 47/80 (58.75%), Query Frame = 1 

Query: 108 GLRGQALEKATTTVPVS-YGSSEGTAKFVDCAICLEDFEKGELCQIFPVCNHIFHYCCIQ 167
           GL+ QAL++    +PV  YGS     K  +C ICL DFE GE  ++ P CNH FH  CI 
Sbjct: 88  GLKKQALKQ----IPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCID 147

Query: 168 RWLKKNMTCPICRCSIVSEK 187
            WL    +CP CR S++ E+
Sbjct: 148 TWLLSRSSCPTCRQSLLLEQ 163

[Close]
BLAST of Cp4.1LG14g00270 vs. Swiss-Prot
Match: ATL74_ARATH (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.5e-11
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 1 

Query: 105 ERKGLRGQALEKATTTVPVS-YGSSEGTAKFVDCAICLEDFEKGELCQIFPVCNHIFHYC 164
           +R GL+ + L+K     PV+ YGS E      +CAICL +F  GE  ++ P CNH FH  
Sbjct: 76  DRAGLKKRELKK----FPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMS 135

Query: 165 CIQRWLKKNMTCPICRCSIV 184
           CI  WL  + +CP CR S++
Sbjct: 136 CIDTWLVSHSSCPNCRHSLI 151

[Close]
BLAST of Cp4.1LG14g00270 vs. Swiss-Prot
Match: ATL73_ARATH (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10
Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 1 

Query: 107 KGLRGQALEKATTTVPVSYGSSEGTAKFVDCAICLEDFEKGELCQIFPVCNHIFHYCCIQ 166
           KG++ +AL+     +PV   S E   K  +C ICL DF +GE  ++ P CNH FH  CI 
Sbjct: 87  KGIKKRALK----VIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCID 146

Query: 167 RWLKKNMTCPICRCSIVSEK 187
            WL  + +CP CR S++  +
Sbjct: 147 TWLLSHSSCPTCRQSLLEHQ 162

[Close]
BLAST of Cp4.1LG14g00270 vs. Swiss-Prot
Match: ATL32_ARATH (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2 SV=3)

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10
Identity = 29/80 (36.25%), Postives = 45/80 (56.25%), Query Frame = 1 

Query: 106 RKGLRGQALEKATTTVPVSYGSSEGTAKFVDCAICLEDFEKGELCQIFPVCNHIFHYCCI 165
           R GL    +E        S   S+  +K ++CAICL + E  E  ++ P+CNH+FH  CI
Sbjct: 93  RGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCI 152

Query: 166 QRWLKKNMTCPICRCSIVSE 186
             WL  + TCP+CR ++ ++
Sbjct: 153 DTWLYSHATCPVCRSNLTAK 172

[Close]
BLAST of Cp4.1LG14g00270 vs. Swiss-Prot
Match: ATL10_ARATH (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.5e-10
Identity = 39/105 (37.14%), Postives = 54/105 (51.43%), Query Frame = 1 

Query: 81  TRILVSHPTRHGGDVENASWREDLERKGLRGQALEKATTTVPVSYGSSEGTAKFVD--CA 140
           TR ++S P      V + S       KG++    +KA    PV   S E     +D  C 
Sbjct: 87  TRFMISEP------VPSLSSTRGSSNKGIK----KKALRMFPVVSYSPEMNLPGLDEECV 146

Query: 141 ICLEDFEKGELCQIFPVCNHIFHYCCIQRWLKKNMTCPICRCSIV 184
           ICL DF  GE  ++ P CNH FH  CI +WL++++TCP CR  +V
Sbjct: 147 ICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLV 181

[Close]
BLAST of Cp4.1LG14g00270 vs. TrEMBL
Match: A0A0A0L6M6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104950 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.3e-50
Identity = 115/188 (61.17%), Postives = 138/188 (73.40%), Query Frame = 1 

Query: 4   PPLNPPPSILPFLTSFSIIILIFVSIIIFSVLASFAIIVLVYFICKYLVRPIYLDEHDPE 63
           P  NPPPSILPFLT+FSI+I+IF++IIIFSV+ASFAIIV +Y ICKYL+    LD H   
Sbjct: 9   PQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSN 68

Query: 64  LVVDERNQNQNQNQSTQTRILVSH--PTRHGGDV----ENASWREDLERKGLRGQALEKA 123
           L   E   N+NQ   T++RIL++H   + HG D+    E+ +WRED+ER  +    +EK 
Sbjct: 69  LEAGE--PNENQMMITRSRILLTHHQTSSHGRDIMERSESNAWREDMERTIM----IEK- 128

Query: 124 TTTVPVSYGSSEGTAKFVDCAICLEDFEKGELCQIFPVCNHIFHYCCIQRWLKKNMTCPI 183
               PVSYGSSE   K +DCAICLEDFE GELCQ FPVCNHIFHY CIQ WLKKNMTCPI
Sbjct: 129 -VAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPI 188

Query: 184 CRCSIVSE 186
           CRCSIV++
Sbjct: 189 CRCSIVND 188

[Close]
BLAST of Cp4.1LG14g00270 vs. TrEMBL
Match: E5GBS2_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-31
Identity = 88/158 (55.70%), Postives = 111/158 (70.25%), Query Frame = 1 

Query: 4   PPLNPPPSILPFLTSFSIIILIFVSIIIFSVLASFAIIVLVYFICKYLVRPIYLDEHDPE 63
           P  NPPPSILPFLT+FSI+I+IF+SIIIFSV+ASFAII+ +Y ICKYL+    LDEH  +
Sbjct: 9   PQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGSTSLDEHVSD 68

Query: 64  LVVDERNQNQNQNQSTQTRILVSH--PTRHGGDV----ENASWREDLERKGLRGQALEKA 123
           L   E   N+NQ    ++RIL++H   + HG D+    E+ +WRE +ER  +    +EK 
Sbjct: 69  LEAGE--TNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERTIM----IEK- 128

Query: 124 TTTVPVSYGSSEGTAKFVDCAICLEDFEKGELCQIFPV 156
               PVSYGSSE  AK +DCAICLEDFE GELCQ FP+
Sbjct: 129 -VAAPVSYGSSEVVAKCIDCAICLEDFENGELCQNFPL 158

[Close]
BLAST of Cp4.1LG14g00270 vs. TrEMBL
Match: M5WWP2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015864mg PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.7e-15
Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 1 

Query: 101 REDLERKGLRGQALEKATTTVPVSYGSSEGTAKFVDCAICLEDFEKGELCQIFPVCNHIF 160
           R D   +  R Q LE      P++YGS E      DC IC+EDFE  +LCQ+FP CNH F
Sbjct: 5   RRDQRHQRDREQLLENKLPP-PIAYGSHEIEMNCKDCVICMEDFETDQLCQVFPSCNHTF 64

Query: 161 HYCCIQRWLKKNMTCPICRCSIV 184
           H  C+  WLKK++TCPICR S++
Sbjct: 65  HSKCMNTWLKKSLTCPICRNSVL 86

[Close]
BLAST of Cp4.1LG14g00270 vs. TrEMBL
Match: V4WEW6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010182mg PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-14
Identity = 40/81 (49.38%), Postives = 51/81 (62.96%), Query Frame = 1 

Query: 105 ERKGLRGQALEKATTTVPVSYGSSEGT--AKFVDCAICLEDFEKGELCQIFPVCNHIFHY 164
           ER+  R +ALEK    V     SS G   + F DC+ICL+D+  GE C++FPVC HIFH 
Sbjct: 82  ERREQRQEALEKLLPLVKYGSSSSSGEILSNFGDCSICLDDYRDGEFCRVFPVCKHIFHV 141

Query: 165 CCIQRWLKKNMTCPICRCSIV 184
            CI  WL   +TCPICR S++
Sbjct: 142 KCIDHWLNNQLTCPICRKSLL 162

[Close]
BLAST of Cp4.1LG14g00270 vs. TrEMBL
Match: A0A067FG84_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035583mg PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.6e-14
Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 1 

Query: 105 ERKGLRGQALEKATTTVPVSYGSSEGT----AKFVDCAICLEDFEKGELCQIFPVCNHIF 164
           ER+  R +ALEK    V   YGSS  +    + F DC+ICL+D+  GE C++FPVC HIF
Sbjct: 75  ERREQRQEALEKLLPLV--KYGSSSSSREILSNFGDCSICLDDYRDGEFCRVFPVCKHIF 134

Query: 165 HYCCIQRWLKKNMTCPICRCSIV 184
           H  CI  WL   +TCPICR S++
Sbjct: 135 HVKCIDHWLNNQLTCPICRKSLL 155

[Close]
BLAST of Cp4.1LG14g00270 vs. TAIR10
Match: AT3G10910.1 (AT3G10910.1 RING/U-box superfamily protein)

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12
Identity = 36/80 (45.00%), Postives = 47/80 (58.75%), Query Frame = 1 

Query: 108 GLRGQALEKATTTVPVS-YGSSEGTAKFVDCAICLEDFEKGELCQIFPVCNHIFHYCCIQ 167
           GL+ QAL++    +PV  YGS     K  +C ICL DFE GE  ++ P CNH FH  CI 
Sbjct: 88  GLKKQALKQ----IPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCID 147

Query: 168 RWLKKNMTCPICRCSIVSEK 187
            WL    +CP CR S++ E+
Sbjct: 148 TWLLSRSSCPTCRQSLLLEQ 163

[Close]
BLAST of Cp4.1LG14g00270 vs. TAIR10
Match: AT5G01880.1 (AT5G01880.1 RING/U-box superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.7e-12
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 1 

Query: 105 ERKGLRGQALEKATTTVPVS-YGSSEGTAKFVDCAICLEDFEKGELCQIFPVCNHIFHYC 164
           +R GL+ + L+K     PV+ YGS E      +CAICL +F  GE  ++ P CNH FH  
Sbjct: 76  DRAGLKKRELKK----FPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMS 135

Query: 165 CIQRWLKKNMTCPICRCSIV 184
           CI  WL  + +CP CR S++
Sbjct: 136 CIDTWLVSHSSCPNCRHSLI 151

[Close]
BLAST of Cp4.1LG14g00270 vs. TAIR10
Match: AT5G05280.1 (AT5G05280.1 RING/U-box superfamily protein)

HSP 1 Score: 67.8 bits (164), Expect = 8.1e-12
Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 1 

Query: 107 KGLRGQALEKATTTVPVSYGSSEGTAKFVDCAICLEDFEKGELCQIFPVCNHIFHYCCIQ 166
           KG++ +AL+     +PV   S E   K  +C ICL DF +GE  ++ P CNH FH  CI 
Sbjct: 87  KGIKKRALK----VIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCID 146

Query: 167 RWLKKNMTCPICRCSIVSEK 187
            WL  + +CP CR S++  +
Sbjct: 147 TWLLSHSSCPTCRQSLLEHQ 162

[Close]
BLAST of Cp4.1LG14g00270 vs. TAIR10
Match: AT4G40070.1 (AT4G40070.1 RING/U-box superfamily protein)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 29/80 (36.25%), Postives = 45/80 (56.25%), Query Frame = 1 

Query: 106 RKGLRGQALEKATTTVPVSYGSSEGTAKFVDCAICLEDFEKGELCQIFPVCNHIFHYCCI 165
           R GL    +E        S   S+  +K ++CAICL + E  E  ++ P+CNH+FH  CI
Sbjct: 93  RGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCI 152

Query: 166 QRWLKKNMTCPICRCSIVSE 186
             WL  + TCP+CR ++ ++
Sbjct: 153 DTWLYSHATCPVCRSNLTAK 172

[Close]
BLAST of Cp4.1LG14g00270 vs. TAIR10
Match: AT1G49220.1 (AT1G49220.1 RING/U-box superfamily protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11
Identity = 39/105 (37.14%), Postives = 54/105 (51.43%), Query Frame = 1 

Query: 81  TRILVSHPTRHGGDVENASWREDLERKGLRGQALEKATTTVPVSYGSSEGTAKFVD--CA 140
           TR ++S P      V + S       KG++    +KA    PV   S E     +D  C 
Sbjct: 87  TRFMISEP------VPSLSSTRGSSNKGIK----KKALRMFPVVSYSPEMNLPGLDEECV 146

Query: 141 ICLEDFEKGELCQIFPVCNHIFHYCCIQRWLKKNMTCPICRCSIV 184
           ICL DF  GE  ++ P CNH FH  CI +WL++++TCP CR  +V
Sbjct: 147 ICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLV 181

[Close]
BLAST of Cp4.1LG14g00270 vs. NCBI nr
Match: gi|659102863|ref|XP_008452354.1| (PREDICTED: putative RING-H2 finger protein ATL19 [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 3.8e-51
Identity = 116/189 (61.38%), Postives = 140/189 (74.07%), Query Frame = 1 

Query: 4   PPLNPPPSILPFLTSFSIIILIFVSIIIFSVLASFAIIVLVYFICKYLVRPIYLDEHDPE 63
           P  NPPPSILPFLT+FSI+I+IF+SIIIFSV+ASFAII+ +Y ICKYL+    LDEH  +
Sbjct: 9   PQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGSTSLDEHVSD 68

Query: 64  LVVDERNQNQNQNQSTQTRILVSH--PTRHGGDV----ENASWREDLERKGLRGQALEKA 123
           L   E N+NQ      ++RIL++H   + HG D+    E+ +WRE +ER  +    +EK 
Sbjct: 69  LEAGETNENQRM--IARSRILLTHHQTSSHGRDIMERSESNTWREGMERTIM----IEKV 128

Query: 124 TTTVPVSYGSSEGTAKFVDCAICLEDFEKGELCQIFPVCNHIFHYCCIQRWLKKNMTCPI 183
               PVSYGSSE  AK +DCAICLEDFE GELCQ FPVCNHIFHY CIQ WLKKNMTCPI
Sbjct: 129 AA--PVSYGSSEVVAKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPI 188

Query: 184 CRCSIVSEK 187
           CRCSIV++K
Sbjct: 189 CRCSIVNDK 189

[Close]
BLAST of Cp4.1LG14g00270 vs. NCBI nr
Match: gi|700201109|gb|KGN56242.1| (hypothetical protein Csa_3G104950 [Cucumis sativus])

HSP 1 Score: 207.6 bits (527), Expect = 1.9e-50
Identity = 115/188 (61.17%), Postives = 138/188 (73.40%), Query Frame = 1 

Query: 4   PPLNPPPSILPFLTSFSIIILIFVSIIIFSVLASFAIIVLVYFICKYLVRPIYLDEHDPE 63
           P  NPPPSILPFLT+FSI+I+IF++IIIFSV+ASFAIIV +Y ICKYL+    LD H   
Sbjct: 9   PQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSN 68

Query: 64  LVVDERNQNQNQNQSTQTRILVSH--PTRHGGDV----ENASWREDLERKGLRGQALEKA 123
           L   E   N+NQ   T++RIL++H   + HG D+    E+ +WRED+ER  +    +EK 
Sbjct: 69  LEAGE--PNENQMMITRSRILLTHHQTSSHGRDIMERSESNAWREDMERTIM----IEK- 128

Query: 124 TTTVPVSYGSSEGTAKFVDCAICLEDFEKGELCQIFPVCNHIFHYCCIQRWLKKNMTCPI 183
               PVSYGSSE   K +DCAICLEDFE GELCQ FPVCNHIFHY CIQ WLKKNMTCPI
Sbjct: 129 -VAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWLKKNMTCPI 188

Query: 184 CRCSIVSE 186
           CRCSIV++
Sbjct: 189 CRCSIVND 188

[Close]
BLAST of Cp4.1LG14g00270 vs. NCBI nr
Match: gi|307136064|gb|ADN33914.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 144.4 bits (363), Expect = 1.9e-31
Identity = 88/158 (55.70%), Postives = 111/158 (70.25%), Query Frame = 1 

Query: 4   PPLNPPPSILPFLTSFSIIILIFVSIIIFSVLASFAIIVLVYFICKYLVRPIYLDEHDPE 63
           P  NPPPSILPFLT+FSI+I+IF+SIIIFSV+ASFAII+ +Y ICKYL+    LDEH  +
Sbjct: 9   PQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGSTSLDEHVSD 68

Query: 64  LVVDERNQNQNQNQSTQTRILVSH--PTRHGGDV----ENASWREDLERKGLRGQALEKA 123
           L   E   N+NQ    ++RIL++H   + HG D+    E+ +WRE +ER  +    +EK 
Sbjct: 69  LEAGE--TNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERTIM----IEK- 128

Query: 124 TTTVPVSYGSSEGTAKFVDCAICLEDFEKGELCQIFPV 156
               PVSYGSSE  AK +DCAICLEDFE GELCQ FP+
Sbjct: 129 -VAAPVSYGSSEVVAKCIDCAICLEDFENGELCQNFPL 158

[Close]
BLAST of Cp4.1LG14g00270 vs. NCBI nr
Match: gi|778688398|ref|XP_011652743.1| (PREDICTED: uncharacterized protein LOC105435076 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 3.3e-31
Identity = 88/157 (56.05%), Postives = 109/157 (69.43%), Query Frame = 1 

Query: 4   PPLNPPPSILPFLTSFSIIILIFVSIIIFSVLASFAIIVLVYFICKYLVRPIYLDEHDPE 63
           P  NPPPSILPFLT+FSI+I+IF++IIIFSV+ASFAIIV +Y ICKYL+    LD H   
Sbjct: 9   PQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGSTSLDGHSSN 68

Query: 64  LVVDERNQNQNQNQSTQTRILVSH--PTRHGGDV----ENASWREDLERKGLRGQALEKA 123
           L   E   N+NQ   T++RIL++H   + HG D+    E+ +WRED+ER  +    +EK 
Sbjct: 69  LEAGE--PNENQMMITRSRILLTHHQTSSHGRDIMERSESNAWREDMERTIM----IEK- 128

Query: 124 TTTVPVSYGSSEGTAKFVDCAICLEDFEKGELCQIFP 155
               PVSYGSSE   K +DCAICLEDFE GELCQ FP
Sbjct: 129 -VAAPVSYGSSEAATKCIDCAICLEDFENGELCQNFP 157

[Close]
BLAST of Cp4.1LG14g00270 vs. NCBI nr
Match: gi|658063734|ref|XP_008367790.1| (PREDICTED: putative RING-H2 finger protein ATL19 [Malus domestica])

HSP 1 Score: 110.2 bits (274), Expect = 4.1e-21
Identity = 69/186 (37.10%), Postives = 100/186 (53.76%), Query Frame = 1 

Query: 9   PPSILPFLTSFSIIILIFVSIIIFSVLASFAIIVLVYFICKYLVRPIYLDEHDPELVVDE 68
           PP +   L+  S II ++V II FS++    +I L+Y IC+++  P Y    +P+   ++
Sbjct: 12  PPPVFSLLSLISKIIFVYVCIIAFSIMLLLIVIALLYVICEFVWTPFYERRSNPDPEAED 71

Query: 69  RNQNQNQN-------QSTQTRILVSHPTRH----GGDVENASWREDLERKGLRGQALEKA 128
           + Q    N       Q+T  +  V H  R        VE    R D  ++ +R Q LE  
Sbjct: 72  QQQLSRPNNGAEWNDQATFYQAAVLHNLRVLEILDSIVEVLEERRDERQQRVREQVLESK 131

Query: 129 TTTVPVSYGSSEGTAKFVDCAICLEDFEKGELCQIFPVCNHIFHYCCIQRWLKKNMTCPI 184
               P++YGS E      DC IC+EDFE  +LCQ+FP CNH FH  C+  WLKK++TCPI
Sbjct: 132 MPP-PIAYGSQETEINCKDCVICMEDFENDQLCQVFPSCNHTFHSNCMNTWLKKSLTCPI 191

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g00270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL72_ARATH2.2e-1145.00RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2 SV=1[more]
ATL74_ARATH6.5e-1142.50RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2 SV=1[more]
ATL73_ARATH1.4e-1040.00RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2 SV=1[more]
ATL32_ARATH1.9e-1036.25RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2 SV=3[more]
ATL10_ARATH2.5e-1037.14RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2 SV=1[more]
BLAST of Cp4.1LG14g00270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6M6_CUCSA1.3e-5061.17Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104950 PE=4 SV=1[more]
E5GBS2_CUCME1.4e-3155.70Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
M5WWP2_PRUPE6.7e-1549.40Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015864mg PE=4 S... [more]
V4WEW6_9ROSI1.5e-1449.38Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010182mg PE=4 SV=1[more]
A0A067FG84_CITSI2.6e-1449.40Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035583mg PE=4 SV=1[more]
BLAST of Cp4.1LG14g00270 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10910.11.3e-1245.00 RING/U-box superfamily protein[more]
AT5G01880.13.7e-1242.50 RING/U-box superfamily protein[more]
AT5G05280.18.1e-1240.00 RING/U-box superfamily protein[more]
AT4G40070.11.1e-1136.25 RING/U-box superfamily protein[more]
AT1G49220.11.4e-1137.14 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG14g00270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102863|ref|XP_008452354.1|3.8e-5161.38PREDICTED: putative RING-H2 finger protein ATL19 [Cucumis melo][more]
gi|700201109|gb|KGN56242.1|1.9e-5061.17hypothetical protein Csa_3G104950 [Cucumis sativus][more]
gi|307136064|gb|ADN33914.1|1.9e-3155.70hypothetical protein [Cucumis melo subsp. melo][more]
gi|778688398|ref|XP_011652743.1|3.3e-3156.05PREDICTED: uncharacterized protein LOC105435076 [Cucumis sativus][more]
gi|658063734|ref|XP_008367790.1|4.1e-2137.10PREDICTED: putative RING-H2 finger protein ATL19 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g00270.1Cp4.1LG14g00270.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 136..179
score: 1.2
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 137..178
score: 7.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 137..179
score: 1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 136..182
score: 1.0
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 88..185
score: 2.0E-26coord: 3..61
score: 2.0
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 136..183
score: 2.17