Cp4.1LG12g00440 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGGGACCGAAAAGCGGGGTCGTGTGGCTTGTTTTGTACTGCGCATTATTTGGGTGGAAAACTCCATTGATAGGCTAATAGAAAAGGAAGCAACTCCCAAAAGAAGAAATCAGGGTTTCTTCGCCACCAACTCTGTAGAATTTTGGTTCAAGATTTCGTCGACGATCAAATTCTTCCTGCGCAGGTCGGTTTTTTCTTCGCTTTTTCTAGCTTTTGCGCTTTTCGATCTTCTCCAATGATTTCCAATCGAAACAATCTATTGAATCTCGACATGCATTGATCCTTCGATTCAGTTTCCCCTTTGTTAGCCATTTCTGCCTTTCTTCGTCATCTTTTAGTTTCGCCGTGTCTAGATCTTGGGCGGCGTATCGTCTATGATTTCATATGCGTTTCTGCTTCTCCTTTTTCTTTTATAGATTTGCTTAGATTTGAGATAGATTACGTCTTTTTGTGGTTACGCTTATGTTAGGGCTTAATCGTCTCTTCAAATGAAATGAGCAATCGAAGTCTTGATATTTATTGAAATTCGTAGCGTAGGTTGAATATATGAGTGTTTGTCGCCACTCCGGGTGCTAGTGCGGCTAGAAAGCTCTGGTTGGGAGTTCTTCTAAGACCGTGAACTTGTGTGTGTAGCAACATTGATGTTATCAATATGTTATGTGATTCTGAGCTACAATAATGCTTCTGTTTCTTCAGAATAACAGGTCTTGTGTAATGTTACCCCCTAGGCTAGTTCTATATTTTGATAAGACGCTCATTGATCAAGTGCATATCTCTCTTTGAACAAGAATCTTGTCCGGAGAAACCTTGACTTGGTTGAAATTGTTCCTTGGAACATCTACAGGTATTAAAAATGTGGGCGACACTTTATCATAGACATTGTAGTGATCTTCACTGTTAAAGAAATTTGGTATCCGCGAGCTTCACCATGATTTTTTGTTTAGAGGTGTGGTGGGAATGAACATTATTACCTCCATGATACAGGAAACTTTGAAAACCCATGTCCCGAGTCTAAAGTTCTGATAGCATCTTAGGGTTTAAGAAGAGGAAAGAATGTATTACTGATTAATTACCATGAATTCACATGACCCCCAACGAACTTTAACAACTTAACTACAAGTTCCAATTTTCATGCTTCTGTGAGAAGCAAAGTCTTCTCTGTTTAACCATTTCGAGTTTTGACCCCCCTATAAGAGGTTTGTGGATTACAAATCCACGATAATTCTTCTGATGATAGGACAGTATGGCTACAGTAAAGAACCTGAAGATTAAGACAGCAACCTGCAAACGCATTATCAAGGAGTTGCATTCTTACGAGAAGGAGGTCGAGAGAGAAGCTGCCAAAACAGCTGACATGAAAGAAAAAGGGGCTGATCCTTATGACCTTAAGCAACAGGTACGTAAATGGCTTGCATTCATAATAATCAAAAGTTTGTAAGATTATTGTTGGCTTGATTGCTTGTGGTTTTATTTGTGCCATCGGTGAATATCTTAAAGAAGACTTTTTAGACTGACTTGTTCAACATTACACAATATGAACAATAGAATTTATGAGCGTGTAGATAAGTGATTTGAACTATGGAGAAGAATAATGGTCTCAAATTTGGAACATAATTTCTGTTCAACTTTATGTTTTGAAAGCTATAAAATCAAAACGACCAACTAAAATATTATTTCGGTAATGGAGATTGAATGAAATGTTATCATCATATGAATCGTCTTCTTCAATCGGTCTATATATTATTATGATTTACAGTTAGCATTCTCACTGTAAGCAGGAAAACGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTGGAGTCTGCCTTGGCTGATCTGAAAGGAACACTGGTATTGGCTTTTCATTCTTCCCTTTTCTGCTTTTATGAGGAGCTTGATTTTAGAAGGTTATCTGCACGTGCCCAATTTTTCTTAGTTTACTAAAACAAATCCTTATCAACTTCTTCATCTCCAGGATGAACTGGAAAAGTCAACACAAGTGAGAGGCCCGGAGTTTGACGATGCTCGGAGCATAATCACCGAGATCGAAAGTTTCCTTAAGACAACAGAGGAATAGTAGTGATCTTAATTACCAATAACAGAATTTTATATTGATAAGCTATTAATCAAACTGTTGCTTTGCAATATTACTTTCTCTTGTCCGGCTTTTGGTTGCTATGTTCATACTTTGGAGAGTTTCATTCCCTGTTATTCACTCCTATCATCAAGTTTAAGACTAAAATCTTCTGTTTCTGCTGGGTGTTGTATTTTAAAACGTTTTGATGGTGTTTGTCCCTATTTAAAAGGAATGTATTAAAAGTATGTATAACAGCTACCTAAGAATCGACCATGGGTAAGCCTAGTAGCATTGTTGATTTCAACCCTATGGTCGAACTTCGAGATATTATAATTCTTTTGAGTTTTCTTGACAATCAAATGTCGTTGGATCAGGCGGCACAAGTAACTTGAATCACATACTGTACAAAATGCTAAATTTTATAGCCTTCACAGATAATTTCATACAGATCTGTCTACACATCAATTATACCTTACAAACACTTCATTTTCCTTTAAGAATGCCGAGACGCTCTCCTAATCTTCCTTCGGAATGGCCTACACGCCTCGATGCTGAGACCAACTGCTGCAGCTAGTGCCATGAAAATGGCAGCATCCTCTGTACATGTCACATGTCGCATGGCGAGTTGCACCATTGGCTTACTGCTCTTTCCTTCCCCTTGTACTCTACAACTCATGACGAAACCTCCGACCACTTGGCCTAAAGCTGCAAAGTCTCCGCTGCTCTGCGGGCTCGGTATTGGAACTGTTGCTGCTCGTAACTGTTTGTCGGTGTCTATGAAGAACTCCCCACCTCTCTCAGCATTGATATGGATCTCAGACATGAGAAGTTCCCCTCCCTCTTGAGCTTCGGAGAGAAGGTGAAAGCGACAGCAGACAGTGTCTCTAATTCCTCGCTCGCGCCATGCCTCGAGCTTTCCCCATGGCTGCCAACTTTCAGGTATGCAAACATCAGGACGAACAATCAGCCAAGACCCGGGGTTTGACCTGGCAACCCAATCGCAACCTGCTGATGGCACAAAGGGAGTAGTTATGAAGGCTGCTGCAACAGCCGAGCCAGAAAGATCATGTATCTTCACCTTCCAGCCTTTTCTTTCTCTCCGCTCGACCTTCAGGTCCGAGCCATCACCAGAACCTAACCAATCTGAGCCATCACCAGAACCTGACCCTGGCCAATAGTTGCTCAATGAATCCACCTGGGATACCCTATAAATTTGATTCAACTGTCAAATATGAAGTCCAACACAAAATGTTCAACAGAAGAAAGTTATTGTCCTAGTGTTGCATGAGTTGCATCACCTGTCTCGACTAAATTTGCAGCTGAAGATCGGCTGTTTGATCGAGCCTAGAAGCTGGACGATTTGCGGGCTTAACCTCGTAACATCTTCAAACTGAAAAACATATCTTGGATCAGGATCAAGTTTCACTCTCAAATGAAGCTCTGCTCCATGTCTTCCATTCTCATTCTTGCTTTTGCCAATGCCTATCCACCCATTGAAAAGAACGACTGGCTTCCCATCGCCCCATTCGGGACCGACATCCAGTTTAAACGTCCCAATCAGCTGCCTCTTGATGCCAACACCACAATGAGATCCCTTCCTTCCAGAGAAGACAGATATTTCAAGACAGGCATGAGTGTTATAGAAGCAGCCAGGTGCTAGTAATGCTTTCAGATCAGACTCCTCAAGATAGAAGCTTGAGGCAATGCTATGAGAATCAGGTATGGCTTCAGGAGACGGGAGAAGCGGGATTGAAGACGTCTGCACAGGGAAACCCCGAAGACGAATTTCACACGAACACGGTGCAGAGAAAGCATTGACGCCAGGTTTTGTAGAGTTTAGAGCAGCTCCTGGGATTCTCAATCCCAAAGATCCAATTGACAACCTAATAAAAGCCTGAGGATCCATTTGGGTCACAATTTTTTGTCCATTTGATATAGATAGTTTATAATGCCACCAGCTCAAGTATCCT TTGGGACCGAAAAGCGGGGTCGTGTGGCTTGTTTTGTACTGCGCATTATTTGGGTGGAAAACTCCATTGATAGGCTAATAGAAAAGGAAGCAACTCCCAAAAGAAGAAATCAGGGTTTCTTCGCCACCAACTCTGTAGAATTTTGGTTCAAGATTTCGTCGACGATCAAATTCTTCCTGCGCAGGACAGTATGGCTACAGTAAAGAACCTGAAGATTAAGACAGCAACCTGCAAACGCATTATCAAGGAGTTGCATTCTTACGAGAAGGAGGTCGAGAGAGAAGCTGCCAAAACAGCTGACATGAAAGAAAAAGGGGCTGATCCTTATGACCTTAAGCAACAGGAAAACGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTGGAGTCTGCCTTGGCTGATCTGAAAGGAACACTGGATGAACTGGAAAAGTCAACACAAGTGAGAGGCCCGGAGTTTGACGATGCTCGGAGCATAATCACCGAGATCGAAAGTTTCCTTAAGACAACAGAGGAATAGTAGTGATCTTAATTACCAATAACAGAATTTTATATTGATAAGCTATTAATCAAACTGTTGCTTTGCAATATTACTTTCTCTTGTCCGGCTTTTGGTTGCTATGTTCATACTTTGGAGAGTTTCATTCCCTGTTATTCACTCCTATCATCAAGTTTAAGACTAAAATCTTCTGTTTCTGCTGGGTGTTGTATTTTAAAACGTTTTGATGGTGTTTGTCCCTATTTAAAAGGAATGTATTAAAAGTATGTATAACAGCTACCTAAGAATCGACCATGGGTAAGCCTAGTAGCATTGTTGATTTCAACCCTATGGTCGAACTTCGAGATATTATAATTCTTTTGAGTTTTCTTGACAATCAAATGTCGTTGGATCAGGCGGCACAAGTAACTTGAATCACATACTGTACAAAATGCTAAATTTTATAGCCTTCACAGATAATTTCATACAGATCTGTCTACACATCAATTATACCTTACAAACACTTCATTTTCCTTTAAGAATGCCGAGACGCTCTCCTAATCTTCCTTCGGAATGGCCTACACGCCTCGATGCTGAGACCAACTGCTGCAGCTAGTGCCATGAAAATGGCAGCATCCTCTGTACATGTCACATGTCGCATGGCGAGTTGCACCATTGGCTTACTGCTCTTTCCTTCCCCTTGTACTCTACAACTCATGACGAAACCTCCGACCACTTGGCCTAAAGCTGCAAAGTCTCCGCTGCTCTGCGGGCTCGGTATTGGAACTGTTGCTGCTCGTAACTGTTTGTCGGTGTCTATGAAGAACTCCCCACCTCTCTCAGCATTGATATGGATCTCAGACATGAGAAGTTCCCCTCCCTCTTGAGCTTCGGAGAGAAGGTGAAAGCGACAGCAGACAGTGTCTCTAATTCCTCGCTCGCGCCATGCCTCGAGCTTTCCCCATGGCTGCCAACTTTCAGGTATGCAAACATCAGGACGAACAATCAGCCAAGACCCGGGGTTTGACCTGGCAACCCAATCGCAACCTGCTGATGGCACAAAGGGAGTAGTTATGAAGGCTGCTGCAACAGCCGAGCCAGAAAGATCATGTATCTTCACCTTCCAGCCTTTTCTTTCTCTCCGCTCGACCTTCAGGTCCGAGCCATCACCAGAACCTAACCAATCTGAGCCATCACCAGAACCTGACCCTGGCCAATAGTTGCTCAATGAATCCACCTGGGATACCCTATAAATTTGATTCAACTGTCAAATATGAAGTCCAACACAAAATGTTCAACAGAAGAAAGTTATTGTCCTAGTGTTGCATGAGTTGCATCACCTGTCTCGACTAAATTTGCAGCTGAAGATCGGCTGTTTGATCGAGCCTAGAAGCTGGACGATTTGCGGGCTTAACCTCGTAACATCTTCAAACTGAAAAACATATCTTGGATCAGGATCAAGTTTCACTCTCAAATGAAGCTCTGCTCCATGTCTTCCATTCTCATTCTTGCTTTTGCCAATGCCTATCCACCCATTGAAAAGAACGACTGGCTTCCCATCGCCCCATTCGGGACCGACATCCAGTTTAAACGTCCCAATCAGCTGCCTCTTGATGCCAACACCACAATGAGATCCCTTCCTTCCAGAGAAGACAGATATTTCAAGACAGGCATGAGTGTTATAGAAGCAGCCAGGTGCTAGTAATGCTTTCAGATCAGACTCCTCAAGATAGAAGCTTGAGGCAATGCTATGAGAATCAGGTATGGCTTCAGGAGACGGGAGAAGCGGGATTGAAGACGTCTGCACAGGGAAACCCCGAAGACGAATTTCACACGAACACGGTGCAGAGAAAGCATTGACGCCAGGTTTTGTAGAGTTTAGAGCAGCTCCTGGGATTCTCAATCCCAAAGATCCAATTGACAACCTAATAAAAGCCTGAGGATCCATTTGGGTCACAATTTTTTGTCCATTTGATATAGATAGTTTATAATGCCACCAGCTCAAGTATCCT ATGGCTACAGTAAAGAACCTGAAGATTAAGACAGCAACCTGCAAACGCATTATCAAGGAGTTGCATTCTTACGAGAAGGAGGTCGAGAGAGAAGCTGCCAAAACAGCTGACATGAAAGAAAAAGGGGCTGATCCTTATGACCTTAAGCAACAGGAAAACGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTGGAGTCTGCCTTGGCTGATCTGAAAGGAACACTGGATGAACTGGAAAAGTCAACACAAGTGAGAGGCCCGGAGTTTGACGATGCTCGGAGCATAATCACCGAGATCGAAAGTTTCCTTAAGACAACAGAGGAATAG MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKGTLDELEKSTQVRGPEFDDARSIITEIESFLKTTEE
BLAST of Cp4.1LG12g00440 vs. Swiss-Prot
Match: TBCA_ARATH (Tubulin-folding cofactor A OS=Arabidopsis thaliana GN=TFCA PE=1 SV=2) HSP 1 Score: 168.3 bits (425), Expect = 4.8e-41 Identity = 82/112 (73.21%), Postives = 97/112 (86.61%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. Swiss-Prot
Match: TBCA_HUMAN (Tubulin-specific chaperone A OS=Homo sapiens GN=TBCA PE=1 SV=3) HSP 1 Score: 75.9 bits (185), Expect = 3.2e-13 Identity = 41/102 (40.20%), Postives = 65/102 (63.73%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. Swiss-Prot
Match: TBCA_CHICK (Tubulin-specific chaperone A OS=Gallus gallus GN=TBCA PE=1 SV=2) HSP 1 Score: 75.9 bits (185), Expect = 3.2e-13 Identity = 44/102 (43.14%), Postives = 63/102 (61.76%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. Swiss-Prot
Match: TBCA_RAT (Tubulin-specific chaperone A OS=Rattus norvegicus GN=Tbca PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 5.5e-13 Identity = 41/102 (40.20%), Postives = 64/102 (62.75%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. Swiss-Prot
Match: TBCA_MOUSE (Tubulin-specific chaperone A OS=Mus musculus GN=Tbca PE=1 SV=3) HSP 1 Score: 73.6 bits (179), Expect = 1.6e-12 Identity = 40/102 (39.22%), Postives = 64/102 (62.75%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. TrEMBL
Match: A0A0A0KER0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G078610 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 3.8e-45 Identity = 99/113 (87.61%), Postives = 103/113 (91.15%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. TrEMBL
Match: A0A0D2TRL2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G347600 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 1.2e-43 Identity = 92/112 (82.14%), Postives = 103/112 (91.96%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. TrEMBL
Match: A0A0B0MLK3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_26345 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 1.6e-43 Identity = 92/112 (82.14%), Postives = 103/112 (91.96%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. TrEMBL
Match: A0A061F0Z2_THECC (Tubulin folding cofactor A (KIESEL) OS=Theobroma cacao GN=TCM_025729 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 7.9e-43 Identity = 89/112 (79.46%), Postives = 103/112 (91.96%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. TrEMBL
Match: M4M6P8_GOSAR (Tubulin-specific chaperone A OS=Gossypium arboreum PE=2 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 3.0e-42 Identity = 92/113 (81.42%), Postives = 103/113 (91.15%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. TAIR10
Match: AT2G30410.1 (AT2G30410.1 tubulin folding cofactor A (KIESEL)) HSP 1 Score: 168.3 bits (425), Expect = 2.7e-42 Identity = 82/112 (73.21%), Postives = 97/112 (86.61%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. NCBI nr
Match: gi|449454548|ref|XP_004145016.1| (PREDICTED: tubulin-folding cofactor A [Cucumis sativus]) HSP 1 Score: 188.7 bits (478), Expect = 5.5e-45 Identity = 99/113 (87.61%), Postives = 103/113 (91.15%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. NCBI nr
Match: gi|700191062|gb|KGN46266.1| (hypothetical protein Csa_6G078610 [Cucumis sativus]) HSP 1 Score: 188.7 bits (478), Expect = 5.5e-45 Identity = 99/113 (87.61%), Postives = 103/113 (91.15%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. NCBI nr
Match: gi|659120230|ref|XP_008460084.1| (PREDICTED: tubulin-folding cofactor A [Cucumis melo]) HSP 1 Score: 187.6 bits (475), Expect = 1.2e-44 Identity = 98/113 (86.73%), Postives = 104/113 (92.04%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. NCBI nr
Match: gi|823199138|ref|XP_012434815.1| (PREDICTED: tubulin-folding cofactor A [Gossypium raimondii]) HSP 1 Score: 183.7 bits (465), Expect = 1.8e-43 Identity = 92/112 (82.14%), Postives = 103/112 (91.96%), Query Frame = 1
BLAST of Cp4.1LG12g00440 vs. NCBI nr
Match: gi|728819044|gb|KHG03018.1| (hypothetical protein F383_26345 [Gossypium arboreum]) HSP 1 Score: 183.3 bits (464), Expect = 2.3e-43 Identity = 92/112 (82.14%), Postives = 103/112 (91.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |