Cp4.1LG11g08680 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g08680
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transcription factor, putative
Location	Cp4.1LG11 : 7036864 .. 7037445 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCGGAGGAATCGAAGAACTCGAAAAGGTCGTTGCAGAAGCCGAATAAACGCCGCCAAATTGCTTCGGATGTTAGTGCGGAAGGTAGAGAACGGAGGTGGAGAACCGAGGTCGAGCAACAGATCTACTCCTCGAGACTCGCGGAAGCGCTCCAGAGAGTCGGCCGCCTGCCGTCCTCGCCGCATGCGAGATCTACTATCAACGGACGGCTTGTTCGTGAAACTGCGGATTGCGTCCTCGCCGCTGCCGCCAAGGGGAGGACTCGATGGAGTCGCGCGATTCTGGCGAATCGATTCCGCCAGAGGCTCGCGAGACGTCGGAGGACGAAGAAATCGATTGGCCGTAAACCGTCGCGCGTGGCGGAGGCGAAGAACAGGAAGTTGCCGGCAGTGCAGAGGAAGGTGAAAATTCTTGGCCAGTTGGTTCCAGGTTGCCGGAAACTCTCATTCCCAAACCTTCTGGAAGAAGCGACCGATTACATATCGGCTTTAGAGATGCAGGTAAAAGCCATGGCGGCGCTGGCCGAAATCCTCGCCGGAGCTCAAAGTAATTTGCTCCCAATCTCGAACGATTCTTGA

mRNA sequence

ATGGACGCGGAGGAATCGAAGAACTCGAAAAGGTCGTTGCAGAAGCCGAATAAACGCCGCCAAATTGCTTCGGATGTTAGTGCGGAAGGTAGAGAACGGAGGTGGAGAACCGAGGTCGAGCAACAGATCTACTCCTCGAGACTCGCGGAAGCGCTCCAGAGAGTCGGCCGCCTGCCGTCCTCGCCGCATGCGAGATCTACTATCAACGGACGGCTTGTTCGTGAAACTGCGGATTGCGTCCTCGCCGCTGCCGCCAAGGGGAGGACTCGATGGAGTCGCGCGATTCTGGCGAATCGATTCCGCCAGAGGCTCGCGAGACGTCGGAGGACGAAGAAATCGATTGGCCGTAAACCGTCGCGCGTGGCGGAGGCGAAGAACAGGAAGTTGCCGGCAGTGCAGAGGAAGGTGAAAATTCTTGGCCAGTTGGTTCCAGGTTGCCGGAAACTCTCATTCCCAAACCTTCTGGAAGAAGCGACCGATTACATATCGGCTTTAGAGATGCAGGTAAAAGCCATGGCGGCGCTGGCCGAAATCCTCGCCGGAGCTCAAAGTAATTTGCTCCCAATCTCGAACGATTCTTGA

Coding sequence (CDS)

ATGGACGCGGAGGAATCGAAGAACTCGAAAAGGTCGTTGCAGAAGCCGAATAAACGCCGCCAAATTGCTTCGGATGTTAGTGCGGAAGGTAGAGAACGGAGGTGGAGAACCGAGGTCGAGCAACAGATCTACTCCTCGAGACTCGCGGAAGCGCTCCAGAGAGTCGGCCGCCTGCCGTCCTCGCCGCATGCGAGATCTACTATCAACGGACGGCTTGTTCGTGAAACTGCGGATTGCGTCCTCGCCGCTGCCGCCAAGGGGAGGACTCGATGGAGTCGCGCGATTCTGGCGAATCGATTCCGCCAGAGGCTCGCGAGACGTCGGAGGACGAAGAAATCGATTGGCCGTAAACCGTCGCGCGTGGCGGAGGCGAAGAACAGGAAGTTGCCGGCAGTGCAGAGGAAGGTGAAAATTCTTGGCCAGTTGGTTCCAGGTTGCCGGAAACTCTCATTCCCAAACCTTCTGGAAGAAGCGACCGATTACATATCGGCTTTAGAGATGCAGGTAAAAGCCATGGCGGCGCTGGCCGAAATCCTCGCCGGAGCTCAAAGTAATTTGCTCCCAATCTCGAACGATTCTTGA

Protein sequence

MDAEESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVGRLPSSPHARSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKPSRVAEAKNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEILAGAQSNLLPISNDS

Homology

[Close]

BLAST of Cp4.1LG11g08680 vs. Swiss-Prot
Match: BH149_ARATH (Transcription factor bHLH149 OS=Arabidopsis thaliana GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.3e-34
Identity = 96/186 (51.61%), Postives = 127/186 (68.28%), Query Frame = 1


Query: 4   EESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVGRLPSSPH 63
           E S+  K  + +  +    A  V+ E   +RW+T   QQIY+ +L EAL+RV +  S+  
Sbjct: 14  ESSRRKKPRISETAEAEIEARRVNEESL-KRWKTNRVQQIYACKLVEALRRVRQRSSTTS 73

Query: 64  ARST---ING--RLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKP 123
              T   ++G  R +R+TAD VLAA+A+G TRWSRAILA+R R +L + R+ KKS G   
Sbjct: 74  NNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKSTGNCK 133

Query: 124 SR--VAEAKNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALA 183
           SR  + E    KLPAV+RK+KILG+LVPGCRK+S PNLL+EATDYI+ALEMQV+AM ALA
Sbjct: 134 SRKGLTETNRIKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVRAMEALA 193

[Close]

BLAST of Cp4.1LG11g08680 vs. Swiss-Prot
Match: BH148_ARATH (Transcription factor bHLH148 OS=Arabidopsis thaliana GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25
Identity = 85/203 (41.87%), Postives = 118/203 (58.13%), Query Frame = 1


Query: 7   KNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVGRLPSSPHARS 66
           +  + S       R  AS VS E    RWR+E +Q+IYS++L +ALQ+V RL SS    S
Sbjct: 21  RKKRSSASSAASSRSSASSVSGE-IHARWRSEKQQRIYSAKLFQALQQV-RLNSSASTSS 80

Query: 67  TIN----GRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIG------- 126
           +      G+ VRE AD  LA +A+GRT WSRAILANR + +  ++RR + ++        
Sbjct: 81  SPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTV 140

Query: 127 ---------RKPSRVAEAKNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALE 186
                    ++   V     + +P V RKV++LG+LVPGC K S P +LEEATDYI ALE
Sbjct: 141 VSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALE 200

Query: 187 MQVKAMAALAEILAGAQSNLLPI 190
           MQV+AM +L ++L+   S   PI
Sbjct: 201 MQVRAMNSLVQLLSSYGSAPPPI 221

[Close]

BLAST of Cp4.1LG11g08680 vs. Swiss-Prot
Match: BH147_ARATH (Transcription factor bHLH147 OS=Arabidopsis thaliana GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-24
Identity = 80/196 (40.82%), Postives = 113/196 (57.65%), Query Frame = 1


Query: 3   AEESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQ--RVGRLPS 62
           +  S  S+R  +K +    +    S      +WR+E +QQIYS++L  AL+  R+ + PS
Sbjct: 18  SSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQPS 77

Query: 63  SPHARSTING-RLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRR---------- 122
           S  + S   G R VRE AD  LA AA+G+T WSRAIL+   + +  + +R          
Sbjct: 78  SSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTTT 137

Query: 123 -TKKSIGRKPSR--VAEAKNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALE 182
            T  SI  K  R  V   K + LPAVQRKVK+L +LVPGCRK S P +LEE TDYI+A+E
Sbjct: 138 LTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAME 197

[Close]

BLAST of Cp4.1LG11g08680 vs. Swiss-Prot
Match: BH150_ARATH (Transcription factor bHLH150 OS=Arabidopsis thaliana GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.8e-24
Identity = 78/170 (45.88%), Postives = 100/170 (58.82%), Query Frame = 1


Query: 19  RRQIASDVSAEGRE--RRWRTEVEQQIYSSRLAEALQRVGRLPSSPHARSTINGRLVRET 78
           RR   S   A  R   RRWR    Q++YS +L +ALQR  R  +            VR+T
Sbjct: 45  RRSRVSSEEAPVRHLSRRWRATTAQKVYSLKLYDALQRSRRSAT------------VRDT 104

Query: 79  ADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKPS---RVAEAKNRKLPAVQ 138
           AD VLA  A+G TRWSRAIL +RF   L RRR TK +     +        + RKL AV 
Sbjct: 105 ADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGSGRRRKLSAVG 164

Query: 139 RKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEILAGAQ 184
            +V++LG LVPGCR+ + P LL+E  DYI+ALEMQV+AM AL++IL+  Q
Sbjct: 165 NRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQ 202

[Close]

BLAST of Cp4.1LG11g08680 vs. TrEMBL
Match: A0A0A0LJ14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034620 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.5e-52
Identity = 131/195 (67.18%), Postives = 148/195 (75.90%), Query Frame = 1


Query: 1   MDAEESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVGRLPS 60
           MDA++S NSK  LQ  NK   +   ++ E  + RW+TE++QQIYSSRL +AL+RV    +
Sbjct: 1   MDADDSNNSKTLLQHSNKC--LPKILTPEPTQHRWKTEIQQQIYSSRLTQALRRV----T 60

Query: 61  SPHARSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRT--KKSIGRKP 120
            P + S +NG LVR TAD VLAA AKGRTRWSRAILA RFRQ LARRRR   KK + RKP
Sbjct: 61  HPRSSSPLNGNLVRRTADSVLAATAKGRTRWSRAILATRFRQSLARRRRRTKKKLLARKP 120

Query: 121 SRVAEAKNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEI 180
               E K RKLPAVQRKVKILG+LVPGCRKLSFPNLLEEATDYISALEMQVKAM ALAE+
Sbjct: 121 ELKTE-KVRKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAEL 180

Query: 181 LAGAQSNLLPISNDS 194
           LAG Q N   ISNDS
Sbjct: 181 LAGNQRNFAGISNDS 188

[Close]

BLAST of Cp4.1LG11g08680 vs. TrEMBL
Match: A0A0A0LVP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555600 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.1e-35
Identity = 101/189 (53.44%), Postives = 133/189 (70.37%), Query Frame = 1


Query: 14  QKPNKRRQIAS-----DVSAEGRERRWRTEVEQQIYSSRLAEALQRV-GRLPSSPHARST 73
           Q+P+KRR+I S     D SA+   RRW TE E +IYSS+L +AL RV  +  +S  + S+
Sbjct: 22  QRPSKRRKIHSPEISVDESADSI-RRWTTESEHRIYSSKLVDALHRVTAQKSASLPSGSS 81

Query: 74  INGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIG---RKPSRVAEA 133
           I+GR VRETAD VLA AAKG+TRWSRAIL N   Q   ++++  K++G   R      + 
Sbjct: 82  IDGRKVRETADRVLAVAAKGKTRWSRAILTNPRLQHKLKKQKKVKTVGNCSRAKKLKIKY 141

Query: 134 KNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEILAGAQS 193
           + RKLP VQRKV+ L +LVPGCRK+SFPNLLEEA+DYISAL+MQV+AM A+AE+LAGA  
Sbjct: 142 ERRKLPTVQRKVRTLSRLVPGCRKISFPNLLEEASDYISALQMQVRAMTAVAELLAGAPG 201

[Close]

BLAST of Cp4.1LG11g08680 vs. TrEMBL
Match: D7KJN4_ARALL (Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471014 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.1e-35
Identity = 100/185 (54.05%), Postives = 129/185 (69.73%), Query Frame = 1


Query: 3   AEESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVG-RLPSS 62
           +E S  S+R   + ++  +I S    E   +RW+T   QQIY+S+L EAL+RV  R  +S
Sbjct: 5   SESSPESRRKKPRISEMAEIESRRINEESLKRWKTNRVQQIYASKLVEALRRVRQRSSTS 64

Query: 63  PHARSTING--RLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKPS 122
                 ++G  R +RETAD VLAA+A+G TRWSRAILA+R R +L + R+ KKS G   S
Sbjct: 65  TETDKVVSGAAREIRETADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKSTGNCKS 124

Query: 123 R--VAEAKNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAE 182
           R  V E    KLPAV+RK+KILG+LVPGCRK+S PNLL+EATDYI+ALEMQV+AM ALAE
Sbjct: 125 RKGVTETNRIKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVRAMEALAE 184

[Close]

BLAST of Cp4.1LG11g08680 vs. TrEMBL
Match: M4DPY1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 8.0e-35
Identity = 95/180 (52.78%), Postives = 129/180 (71.67%), Query Frame = 1


Query: 5   ESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVGRLPSSPHA 64
           ES+  +R + +  K    +S+++ E   +RWRT   QQIY+S+L EAL+RV R  S+   
Sbjct: 19  ESRRKRRRISETAKETAESSEINQESL-KRWRTNRVQQIYASKLVEALRRV-RQRSNDGG 78

Query: 65  RSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKPSR--VA 124
           + T   R +R+TAD VLAA+A+G TRWSRA+LA R R  L + ++ K +  RKP +   A
Sbjct: 79  KITSAAREIRDTADRVLAASARGTTRWSRAVLATRVRASLKKHKKAKLTGARKPRKDTAA 138

Query: 125 EAKNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEILAGA 183
           E K  KLPAV+RK+KILG+LVPGCRK++ PNLL+EATDYI+ALEMQV+AM +LAE+LA A
Sbjct: 139 ERKRSKLPAVERKLKILGRLVPGCRKVTVPNLLDEATDYIAALEMQVRAMESLAELLAAA 196

[Close]

BLAST of Cp4.1LG11g08680 vs. TrEMBL
Match: A5AMF3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026724 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-34
Identity = 101/190 (53.16%), Postives = 131/190 (68.95%), Query Frame = 1


Query: 5   ESKNSKRSLQKPN-KRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVGRLPSSPH 64
           +S+   RS++    KR+++ S      R  RWRTE EQQIYS++L EA+ +V R  SS  
Sbjct: 9   DSEGGYRSMESNRRKRKKMESGSQKVKRGGRWRTEAEQQIYSAKLVEAITKVRR--SSAP 68

Query: 65  ARSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKPSRVAE 124
           A +   GR VRE AD VLAAA KGRTRWSRAI+ +R   RL +RR+   +   +  + A 
Sbjct: 69  AAAVHRGRAVREAADRVLAAAGKGRTRWSRAIMTSRVGLRLRKRRKVTVTGNNRLRKPAV 128

Query: 125 AKNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEILAG-- 184
           +K    P ++R+V++LG+LVPGCRKLSFPNLLEEATDYI+ALEMQV+AM ALAE+LAG  
Sbjct: 129 SKQE--PPLKRRVRVLGRLVPGCRKLSFPNLLEEATDYIAALEMQVRAMTALAELLAGTG 188

Query: 185 -AQSNLLPIS 191
            + SNL P S
Sbjct: 189 ASSSNLQPPS 194

[Close]

BLAST of Cp4.1LG11g08680 vs. TAIR10
Match: AT1G09250.1 (AT1G09250.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 146.0 bits (367), Expect = 2.4e-35
Identity = 96/186 (51.61%), Postives = 127/186 (68.28%), Query Frame = 1


Query: 4   EESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVGRLPSSPH 63
           E S+  K  + +  +    A  V+ E   +RW+T   QQIY+ +L EAL+RV +  S+  
Sbjct: 14  ESSRRKKPRISETAEAEIEARRVNEESL-KRWKTNRVQQIYACKLVEALRRVRQRSSTTS 73

Query: 64  ARST---ING--RLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKP 123
              T   ++G  R +R+TAD VLAA+A+G TRWSRAILA+R R +L + R+ KKS G   
Sbjct: 74  NNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKSTGNCK 133

Query: 124 SR--VAEAKNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALA 183
           SR  + E    KLPAV+RK+KILG+LVPGCRK+S PNLL+EATDYI+ALEMQV+AM ALA
Sbjct: 134 SRKGLTETNRIKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVRAMEALA 193

[Close]

BLAST of Cp4.1LG11g08680 vs. TAIR10
Match: AT3G06590.1 (AT3G06590.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 117.9 bits (294), Expect = 7.1e-27
Identity = 85/203 (41.87%), Postives = 118/203 (58.13%), Query Frame = 1


Query: 7   KNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVGRLPSSPHARS 66
           +  + S       R  AS VS E    RWR+E +Q+IYS++L +ALQ+V RL SS    S
Sbjct: 21  RKKRSSASSAASSRSSASSVSGE-IHARWRSEKQQRIYSAKLFQALQQV-RLNSSASTSS 80

Query: 67  TIN----GRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIG------- 126
           +      G+ VRE AD  LA +A+GRT WSRAILANR + +  ++RR + ++        
Sbjct: 81  SPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTV 140

Query: 127 ---------RKPSRVAEAKNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALE 186
                    ++   V     + +P V RKV++LG+LVPGC K S P +LEEATDYI ALE
Sbjct: 141 VSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALE 200

Query: 187 MQVKAMAALAEILAGAQSNLLPI 190
           MQV+AM +L ++L+   S   PI
Sbjct: 201 MQVRAMNSLVQLLSSYGSAPPPI 221

[Close]

BLAST of Cp4.1LG11g08680 vs. TAIR10
Match: AT3G17100.1 (AT3G17100.1 sequence-specific DNA binding transcription factors)

HSP 1 Score: 114.4 bits (285), Expect = 7.9e-26
Identity = 80/196 (40.82%), Postives = 113/196 (57.65%), Query Frame = 1


Query: 3   AEESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQ--RVGRLPS 62
           +  S  S+R  +K +    +    S      +WR+E +QQIYS++L  AL+  R+ + PS
Sbjct: 18  SSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQPS 77

Query: 63  SPHARSTING-RLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRR---------- 122
           S  + S   G R VRE AD  LA AA+G+T WSRAIL+   + +  + +R          
Sbjct: 78  SSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTTT 137

Query: 123 -TKKSIGRKPSR--VAEAKNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALE 182
            T  SI  K  R  V   K + LPAVQRKVK+L +LVPGCRK S P +LEE TDYI+A+E
Sbjct: 138 LTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAME 197

[Close]

BLAST of Cp4.1LG11g08680 vs. TAIR10
Match: AT3G05800.1 (AT3G05800.1 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1)

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25
Identity = 78/170 (45.88%), Postives = 100/170 (58.82%), Query Frame = 1


Query: 19  RRQIASDVSAEGRE--RRWRTEVEQQIYSSRLAEALQRVGRLPSSPHARSTINGRLVRET 78
           RR   S   A  R   RRWR    Q++YS +L +ALQR  R  +            VR+T
Sbjct: 45  RRSRVSSEEAPVRHLSRRWRATTAQKVYSLKLYDALQRSRRSAT------------VRDT 104

Query: 79  ADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKPS---RVAEAKNRKLPAVQ 138
           AD VLA  A+G TRWSRAIL +RF   L RRR TK +     +        + RKL AV 
Sbjct: 105 ADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGSGRRRKLSAVG 164

Query: 139 RKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEILAGAQ 184
            +V++LG LVPGCR+ + P LL+E  DYI+ALEMQV+AM AL++IL+  Q
Sbjct: 165 NRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQ 202

[Close]

BLAST of Cp4.1LG11g08680 vs. NCBI nr
Match: gi|659131114|ref|XP_008465518.1| (PREDICTED: transcription factor bHLH149-like [Cucumis melo])

HSP 1 Score: 216.5 bits (550), Expect = 4.2e-53
Identity = 132/194 (68.04%), Postives = 151/194 (77.84%), Query Frame = 1


Query: 1   MDAEESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVGRLPS 60
           MDA++S NS   L  P  +R     ++AE  +  W+TE++QQIYSSRLAEAL+RV    +
Sbjct: 1   MDADQSNNSTTLLPHPANKRP-PKILTAEPTQHTWKTEIQQQIYSSRLAEALRRV----T 60

Query: 61  SPHARSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLA-RRRRTKKSIGRKPS 120
            P + STING LVR+TAD VLAA AKGR+RWSRAILA RFRQ LA RRRRTKK + RKP 
Sbjct: 61  HPRSSSTINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKP- 120

Query: 121 RVAEAKNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEIL 180
            +   K RKLPAVQRKVKILG+LVPGCRKLSFPNLLEEATDYISALEMQVKAM ALAE+L
Sbjct: 121 ELKNEKARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELL 180

Query: 181 AGAQSNLLPISNDS 194
           AG Q N+  ISNDS
Sbjct: 181 AGNQRNIAGISNDS 188

[Close]

BLAST of Cp4.1LG11g08680 vs. NCBI nr
Match: gi|449454000|ref|XP_004144744.1| (PREDICTED: transcription factor bHLH149 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 3.5e-52
Identity = 131/195 (67.18%), Postives = 148/195 (75.90%), Query Frame = 1


Query: 1   MDAEESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVGRLPS 60
           MDA++S NSK  LQ  NK   +   ++ E  + RW+TE++QQIYSSRL +AL+RV    +
Sbjct: 1   MDADDSNNSKTLLQHSNKC--LPKILTPEPTQHRWKTEIQQQIYSSRLTQALRRV----T 60

Query: 61  SPHARSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRT--KKSIGRKP 120
            P + S +NG LVR TAD VLAA AKGRTRWSRAILA RFRQ LARRRR   KK + RKP
Sbjct: 61  HPRSSSPLNGNLVRRTADSVLAATAKGRTRWSRAILATRFRQSLARRRRRTKKKLLARKP 120

Query: 121 SRVAEAKNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEI 180
               E K RKLPAVQRKVKILG+LVPGCRKLSFPNLLEEATDYISALEMQVKAM ALAE+
Sbjct: 121 ELKTE-KVRKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAEL 180

Query: 181 LAGAQSNLLPISNDS 194
           LAG Q N   ISNDS
Sbjct: 181 LAGNQRNFAGISNDS 188

[Close]

BLAST of Cp4.1LG11g08680 vs. NCBI nr
Match: gi|659099312|ref|XP_008450537.1| (PREDICTED: transcription factor bHLH149-like [Cucumis melo])

HSP 1 Score: 162.9 bits (411), Expect = 5.5e-37
Identity = 103/188 (54.79%), Postives = 133/188 (70.74%), Query Frame = 1


Query: 15  KPNKRRQIAS-----DVSAEGRERRWRTEVEQQIYSSRLAEALQRV-GRLPSSPHARSTI 74
           +P KRR+I S     D SA+ R R W TE E +IYSS+L +AL RV     +S  +RS+I
Sbjct: 25  RPTKRRKIQSPEISVDESADSRTR-WTTESEHRIYSSKLVDALHRVTAHKSTSLPSRSSI 84

Query: 75  NGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIG---RKPSRVAEAK 134
           +GR VRETAD VLA AAKG+TRWSRAIL N   QR  ++++  K++G   R      + +
Sbjct: 85  DGRKVRETADRVLAVAAKGKTRWSRAILTNPRLQRKLKKQKKVKTVGNCSRAKKLKIKYE 144

Query: 135 NRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEILAGAQSN 194
            RKLP VQRKV+ LG+LVPGCRK+SFPNLLEEA+DYISAL+MQV+AM A+AE+L GA  +
Sbjct: 145 TRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYISALQMQVRAMTAVAELLGGAPVD 204

[Close]

BLAST of Cp4.1LG11g08680 vs. NCBI nr
Match: gi|449435946|ref|XP_004135755.1| (PREDICTED: transcription factor bHLH149-like [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 3.0e-35
Identity = 101/189 (53.44%), Postives = 133/189 (70.37%), Query Frame = 1


Query: 14  QKPNKRRQIAS-----DVSAEGRERRWRTEVEQQIYSSRLAEALQRV-GRLPSSPHARST 73
           Q+P+KRR+I S     D SA+   RRW TE E +IYSS+L +AL RV  +  +S  + S+
Sbjct: 22  QRPSKRRKIHSPEISVDESADSI-RRWTTESEHRIYSSKLVDALHRVTAQKSASLPSGSS 81

Query: 74  INGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIG---RKPSRVAEA 133
           I+GR VRETAD VLA AAKG+TRWSRAIL N   Q   ++++  K++G   R      + 
Sbjct: 82  IDGRKVRETADRVLAVAAKGKTRWSRAILTNPRLQHKLKKQKKVKTVGNCSRAKKLKIKY 141

Query: 134 KNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEILAGAQS 193
           + RKLP VQRKV+ L +LVPGCRK+SFPNLLEEA+DYISAL+MQV+AM A+AE+LAGA  
Sbjct: 142 ERRKLPTVQRKVRTLSRLVPGCRKISFPNLLEEASDYISALQMQVRAMTAVAELLAGAPG 201

[Close]

BLAST of Cp4.1LG11g08680 vs. NCBI nr
Match: gi|297843716|ref|XP_002889739.1| (hypothetical protein ARALYDRAFT_471014 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 155.6 bits (392), Expect = 8.7e-35
Identity = 100/185 (54.05%), Postives = 129/185 (69.73%), Query Frame = 1


Query: 3   AEESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVG-RLPSS 62
           +E S  S+R   + ++  +I S    E   +RW+T   QQIY+S+L EAL+RV  R  +S
Sbjct: 5   SESSPESRRKKPRISEMAEIESRRINEESLKRWKTNRVQQIYASKLVEALRRVRQRSSTS 64

Query: 63  PHARSTING--RLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKPS 122
                 ++G  R +RETAD VLAA+A+G TRWSRAILA+R R +L + R+ KKS G   S
Sbjct: 65  TETDKVVSGAAREIRETADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKSTGNCKS 124

Query: 123 R--VAEAKNRKLPAVQRKVKILGQLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAE 182
           R  V E    KLPAV+RK+KILG+LVPGCRK+S PNLL+EATDYI+ALEMQV+AM ALAE
Sbjct: 125 RKGVTETNRIKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVRAMEALAE 184

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g08680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH149_ARATH	4.3e-34	51.61	Transcription factor bHLH149 OS=Arabidopsis thaliana GN=BHLH149 PE=1 SV=1	[more]
BH148_ARATH	1.3e-25	41.87	Transcription factor bHLH148 OS=Arabidopsis thaliana GN=BHLH148 PE=1 SV=1	[more]
BH147_ARATH	1.4e-24	40.82	Transcription factor bHLH147 OS=Arabidopsis thaliana GN=BHLH147 PE=1 SV=1	[more]
BH150_ARATH	1.8e-24	45.88	Transcription factor bHLH150 OS=Arabidopsis thaliana GN=BHLH150 PE=1 SV=1	[more]

BLAST of Cp4.1LG11g08680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ14_CUCSA	2.5e-52	67.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034620 PE=4 SV=1	[more]
A0A0A0LVP8_CUCSA	2.1e-35	53.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555600 PE=4 SV=1	[more]
D7KJN4_ARALL	6.1e-35	54.05	Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata ...	[more]
M4DPY1_BRARP	8.0e-35	52.78	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
A5AMF3_VITVI	1.0e-34	53.16	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026724 PE=4 SV=1	[more]

BLAST of Cp4.1LG11g08680 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09250.1	2.4e-35	51.61	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.1	7.1e-27	41.87	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G17100.1	7.9e-26	40.82	sequence-specific DNA binding transcription factors	[more]
AT3G05800.1	1.0e-25	45.88	AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1	[more]

BLAST of Cp4.1LG11g08680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131114\|ref\|XP_008465518.1\|	4.2e-53	68.04	PREDICTED: transcription factor bHLH149-like [Cucumis melo]	[more]
gi\|449454000\|ref\|XP_004144744.1\|	3.5e-52	67.18	PREDICTED: transcription factor bHLH149 [Cucumis sativus]	[more]
gi\|659099312\|ref\|XP_008450537.1\|	5.5e-37	54.79	PREDICTED: transcription factor bHLH149-like [Cucumis melo]	[more]
gi\|449435946\|ref\|XP_004135755.1\|	3.0e-35	53.44	PREDICTED: transcription factor bHLH149-like [Cucumis sativus]	[more]
gi\|297843716\|ref\|XP_002889739.1\|	8.7e-35	54.05	hypothetical protein ARALYDRAFT_471014 [Arabidopsis lyrata subsp. lyrata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g08680.1	Cp4.1LG11g08680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 135..174 score: 6.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 116..165 score: 9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 133..184 score: 3.7
None	No IPR available	PANTHER	PTHR33124	FAMILY NOT NAMED	coord: 5..193 score: 1.8
None	No IPR available	PANTHER	PTHR33124:SF12	TRANSCRIPTION FACTOR BHLH147-RELATED	coord: 5..193 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG11g08680	Cucsa.090560	Cucumber (Gy14) v1	cgycpeB0168
Cp4.1LG11g08680	CmaCh05G010680	Cucurbita maxima (Rimu)	cmacpeB767
Cp4.1LG11g08680	CmoCh05G010780	Cucurbita moschata (Rifu)	cmocpeB721
Cp4.1LG11g08680	Cla005156	Watermelon (97103) v1	cpewmB104
Cp4.1LG11g08680	Cla019979	Watermelon (97103) v1	cpewmB113
Cp4.1LG11g08680	Csa2G034620	Cucumber (Chinese Long) v2	cpecuB104
Cp4.1LG11g08680	MELO3C015253	Melon (DHL92) v3.5.1	cpemeB084
Cp4.1LG11g08680	ClCG02G014830	Watermelon (Charleston Gray)	cpewcgB104
Cp4.1LG11g08680	ClCG03G017760	Watermelon (Charleston Gray)	cpewcgB109
Cp4.1LG11g08680	CSPI02G04790	Wild cucumber (PI 183967)	cpecpiB100
Cp4.1LG11g08680	Lsi06G000520	Bottle gourd (USVL1VR-Ls)	cpelsiB095
Cp4.1LG11g08680	Lsi11G006440	Bottle gourd (USVL1VR-Ls)	cpelsiB075
Cp4.1LG11g08680	MELO3C015253.2	Melon (DHL92) v3.6.1	cpemedB108
Cp4.1LG11g08680	CsaV3_2G007180	Cucumber (Chinese Long) v3	cpecucB0115
Cp4.1LG11g08680	Bhi06G001346	Wax gourd	cpewgoB0124
Cp4.1LG11g08680	CsGy2G004930	Cucumber (Gy14) v2	cgybcpeB168
Cp4.1LG11g08680	Carg11997	Silver-seed gourd	carcpeB0800
Cp4.1LG11g08680	Carg05555	Silver-seed gourd	carcpeB0098

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG11g08680	Cp4.1LG12g03270	Cucurbita pepo (Zucchini)	cpecpeB109
Cp4.1LG11g08680	Cp4.1LG07g08560	Cucurbita pepo (Zucchini)	cpecpeB139

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG11g08680	Cucumber (Chinese Long) v3	cpecucB0100
Cp4.1LG11g08680	Cucurbita maxima (Rimu)	cmacpeB171
Cp4.1LG11g08680	Cucurbita moschata (Rifu)	cmocpeB147
Cp4.1LG11g08680	Melon (DHL92) v3.5.1	cpemeB099
Cp4.1LG11g08680	Melon (DHL92) v3.6.1	cpemedB123