ClCG03G017760 (gene) Watermelon (Charleston Gray)

Overview
NameClCG03G017760
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionTranscription factor, putative
LocationCG_Chr03 : 32902011 .. 32902640 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCGATTGCTTCTAACCTACAAGACCTCACGAGTTCTGATTTCACGGAGCAGCGTCCGTGTAAACGCCGAAAAATCGAATCGGAGAATCAAGCGGCGGAGATTTGCGTTGCTGAATCTGCGGATTTGAGAAGACGGTGGAGAACAGAGTCGGAGCAGCGGATTTACTCTTCCAAACTAGTCGATGCTCTTCATCGAGTAACCACTCAGAAATCTACATCGCTGCCAGCGAGATCTTCGATCGACGGCCGCAAAGTCCGCGAGACGGCGGACCGAGTTCTAGCCGTCGCCGCCAAAGGAAAGACTCGCTGGAGCAGAGCAATTCTCACGAATCGAGTTGAACTCAAAGTCAAGAAGCATAAGAAGGTGAAGCCGGTCGGAAACTGTAGTCGGCCGAAGAAATTGAAAATTAAGTACGAGACGAGAAAATTGCCGACGGTGCAGAGGAAAGTTCGAACTCTAGGCCGCCTGGTTCCTGGCTGCCGGAAAATCTCATTTCCAAATCTTCTTGAAGAAGCGTCGGATTACATCGCCGCTCTACAGATGCAGGTCCGCGCCATGACAGCCGTCGCCGAGCTCCTCGCCGGCGCCCCGGCTGATCGTCAAAGTTTTAGAACAAATTCGTAG

mRNA sequence

ATGGATGCGATTGCTTCTAACCTACAAGACCTCACGAGTTCTGATTTCACGGAGCAGCGTCCGTGTAAACGCCGAAAAATCGAATCGGAGAATCAAGCGGCGGAGATTTGCGTTGCTGAATCTGCGGATTTGAGAAGACGGTGGAGAACAGAGTCGGAGCAGCGGATTTACTCTTCCAAACTAGTCGATGCTCTTCATCGAGTAACCACTCAGAAATCTACATCGCTGCCAGCGAGATCTTCGATCGACGGCCGCAAAGTCCGCGAGACGGCGGACCGAGTTCTAGCCGTCGCCGCCAAAGGAAAGACTCGCTGGAGCAGAGCAATTCTCACGAATCGAGTTGAACTCAAAGTCAAGAAGCATAAGAAGGTGAAGCCGGTCGGAAACTGTAGTCGGCCGAAGAAATTGAAAATTAAGTACGAGACGAGAAAATTGCCGACGGTGCAGAGGAAAGTTCGAACTCTAGGCCGCCTGGTTCCTGGCTGCCGGAAAATCTCATTTCCAAATCTTCTTGAAGAAGCGTCGGATTACATCGCCGCTCTACAGATGCAGGTCCGCGCCATGACAGCCGTCGCCGAGCTCCTCGCCGGCGCCCCGGCTGATCGTCAAAGTTTTAGAACAAATTCGTAG

Coding sequence (CDS)

ATGGATGCGATTGCTTCTAACCTACAAGACCTCACGAGTTCTGATTTCACGGAGCAGCGTCCGTGTAAACGCCGAAAAATCGAATCGGAGAATCAAGCGGCGGAGATTTGCGTTGCTGAATCTGCGGATTTGAGAAGACGGTGGAGAACAGAGTCGGAGCAGCGGATTTACTCTTCCAAACTAGTCGATGCTCTTCATCGAGTAACCACTCAGAAATCTACATCGCTGCCAGCGAGATCTTCGATCGACGGCCGCAAAGTCCGCGAGACGGCGGACCGAGTTCTAGCCGTCGCCGCCAAAGGAAAGACTCGCTGGAGCAGAGCAATTCTCACGAATCGAGTTGAACTCAAAGTCAAGAAGCATAAGAAGGTGAAGCCGGTCGGAAACTGTAGTCGGCCGAAGAAATTGAAAATTAAGTACGAGACGAGAAAATTGCCGACGGTGCAGAGGAAAGTTCGAACTCTAGGCCGCCTGGTTCCTGGCTGCCGGAAAATCTCATTTCCAAATCTTCTTGAAGAAGCGTCGGATTACATCGCCGCTCTACAGATGCAGGTCCGCGCCATGACAGCCGTCGCCGAGCTCCTCGCCGGCGCCCCGGCTGATCGTCAAAGTTTTAGAACAAATTCGTAG

Protein sequence

MDAIASNLQDLTSSDFTEQRPCKRRKIESENQAAEICVAESADLRRRWRTESEQRIYSSKLVDALHRVTTQKSTSLPARSSIDGRKVRETADRVLAVAAKGKTRWSRAILTNRVELKVKKHKKVKPVGNCSRPKKLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYIAALQMQVRAMTAVAELLAGAPADRQSFRTNS
Homology
[Close]
BLAST of ClCG03G017760 vs. Swiss-Prot
Match: BH149_ARATH (Transcription factor bHLH149 OS=Arabidopsis thaliana GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.2e-39
Identity = 94/192 (48.96%), Postives = 125/192 (65.10%), Query Frame = 1 

Query: 12  TSSDFTEQRPCKRRKIESENQAAEICVAESADLRRRWRTESEQRIYSSKLVDALHRVTTQ 71
           T      ++P      E+E +A  +    + +  +RW+T   Q+IY+ KLV+AL RV  +
Sbjct: 12  TGESSRRKKPRISETAEAEIEARRV----NEESLKRWKTNRVQQIYACKLVEALRRVRQR 71

Query: 72  KSTSLPARSS--IDG--RKVRETADRVLAVAAKGKTRWSRAILTNRVELKVKKHKKV-KP 131
            ST+    +   + G  R++R+TADRVLA +A+G TRWSRAIL +RV  K+KKH+K  K 
Sbjct: 72  SSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKS 131

Query: 132 VGNCSRPKKLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYIAALQMQVR 191
            GNC   K L  +    KLP V+RK++ LGRLVPGCRK+S PNLL+EA+DYIAAL+MQVR
Sbjct: 132 TGNCKSRKGL-TETNRIKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVR 191

Query: 192 AMTAVAELLAGA 199
           AM A+AELL  A
Sbjct: 192 AMEALAELLTAA 198

[Close]
BLAST of ClCG03G017760 vs. Swiss-Prot
Match: BH147_ARATH (Transcription factor bHLH147 OS=Arabidopsis thaliana GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.0e-36
Identity = 90/210 (42.86%), Postives = 129/210 (61.43%), Query Frame = 1 

Query: 4   IASNLQDLTSSDFTEQRPCKRRKIESENQAAEICVAESADLRRRWRTESEQRIYSSKLVD 63
           +++ L   T++     R  ++RK +S   + E   + S  L + WR+E +Q+IYS+KLV 
Sbjct: 7   VSNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLEK-WRSEKQQQIYSTKLVH 66

Query: 64  ALHRVTTQKSTSLPARSSID--GRKVRETADRVLAVAAKGKTRWSRAILTNRVELKVKKH 123
           AL  +   +  S  + SSI   GR VRE ADR LAVAA+GKT WSRAIL+  V+LK +KH
Sbjct: 67  ALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKH 126

Query: 124 KKVKPVGNCS---------RPKKLK---IKYETRKLPTVQRKVRTLGRLVPGCRKISFPN 183
           K+ + + N +         R KK +   ++ + + LP VQRKV+ L RLVPGCRK S P 
Sbjct: 127 KRQR-ISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPV 186

Query: 184 LLEEASDYIAALQMQVRAMTAVAELLAGAP 200
           +LEE +DYIAA++MQ+R MTA+   ++ +P
Sbjct: 187 VLEETTDYIAAMEMQIRTMTAILSAVSSSP 214

[Close]
BLAST of ClCG03G017760 vs. Swiss-Prot
Match: BH148_ARATH (Transcription factor bHLH148 OS=Arabidopsis thaliana GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.9e-35
Identity = 88/212 (41.51%), Postives = 125/212 (58.96%), Query Frame = 1 

Query: 1   MDAIASNLQDLTSSDFTEQRPCKRRKIESENQAAEICVAESADLRRRWRTESEQRIYSSK 60
           M ++ S+++  TS+     R  KR    S   +     + S ++  RWR+E +QRIYS+K
Sbjct: 1   MASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAK 60

Query: 61  LVDALH--RVTTQKSTSLPARSSIDGRKVRETADRVLAVAAKGKTRWSRAILTNRVELKV 120
           L  AL   R+ +  STS    +   G+ VRE ADR LAV+A+G+T WSRAIL NR++LK 
Sbjct: 61  LFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKF 120

Query: 121 KKHKK-------------VKPVGNCSRPKKLKI-KYETRKLPTVQRKVRTLGRLVPGCRK 180
           +K ++             V    N SR +++ + +   + +P V RKVR LGRLVPGC K
Sbjct: 121 RKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGK 180

Query: 181 ISFPNLLEEASDYIAALQMQVRAMTAVAELLA 197
            S P +LEEA+DYI AL+MQVRAM ++ +LL+
Sbjct: 181 QSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

[Close]
BLAST of ClCG03G017760 vs. Swiss-Prot
Match: BH150_ARATH (Transcription factor bHLH150 OS=Arabidopsis thaliana GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.3e-27
Identity = 73/175 (41.71%), Postives = 103/175 (58.86%), Query Frame = 1 

Query: 23  KRRKIESENQAAEICVAESADLRRRWRTESEQRIYSSKLVDALHRVTTQKSTSLPARSSI 82
           +R ++ SE        A    L RRWR  + Q++YS KL DAL R  +++S +       
Sbjct: 45  RRSRVSSEE-------APVRHLSRRWRATTAQKVYSLKLYDALQR--SRRSAT------- 104

Query: 83  DGRKVRETADRVLAVAAKGKTRWSRAILTNRVELKVKKHKKVKPVGNCSRP-KKLKIKYE 142
               VR+TAD+VLA  A+G TRWSRAIL +R    +++ +  KP    +   +       
Sbjct: 105 ----VRDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGSGR 164

Query: 143 TRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYIAALQMQVRAMTAVAELLA 197
            RKL  V  +VR LG LVPGCR+ + P LL+E +DYIAAL+MQVRAMTA++++L+
Sbjct: 165 RRKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILS 199

[Close]
BLAST of ClCG03G017760 vs. Swiss-Prot
Match: IBH1_ARATH (Transcription factor IBH1 OS=Arabidopsis thaliana GN=IBH1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.2e-06
Identity = 40/148 (27.03%), Postives = 67/148 (45.27%), Query Frame = 1 

Query: 53  EQRIYSSKLVDALHRVTTQKSTSLPARSSIDGRKVRETADRVLAVAAKGKTR-WSRAILT 112
           E+ +++   + +L  +  Q     P + +   RK+++ A   +A AA G +R WSRA+L 
Sbjct: 14  EKDVFAFHFLQSLSNLRKQNPFDTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALLR 73

Query: 113 NRVELKVKKHKKVKPVGNCSRPK---KLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFP 172
                  +  K    +   SR K     K +   ++ P V+     L  LVPG   +   
Sbjct: 74  -------RADKDDNKIVRFSRRKWKISSKRRRSNQRAPVVEEAAERLRNLVPGGGGMETS 133

Query: 173 NLLEEASDYIAALQMQVRAMTAVAELLA 197
            L+EE + YI  L MQV+ M  + + L+
Sbjct: 134 KLMEETAHYIKCLSMQVKVMQCLVDGLS 154

[Close]
BLAST of ClCG03G017760 vs. TrEMBL
Match: A0A0A0LVP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555600 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 6.9e-85
Identity = 177/211 (83.89%), Postives = 183/211 (86.73%), Query Frame = 1 

Query: 1   MDAIASNLQDLTSSDFTE-QRPCKRRKIESENQAAEICVAESADLRRRWRTESEQRIYSS 60
           MD I+SNLQ LTSSDFTE QRP KRRKI S     EI V ESAD  RRW TESE RIYSS
Sbjct: 3   MDPISSNLQHLTSSDFTEDQRPSKRRKIHSP----EISVDESADSIRRWTTESEHRIYSS 62

Query: 61  KLVDALHRVTTQKSTSLPARSSIDGRKVRETADRVLAVAAKGKTRWSRAILTN-RVELKV 120
           KLVDALHRVT QKS SLP+ SSIDGRKVRETADRVLAVAAKGKTRWSRAILTN R++ K+
Sbjct: 63  KLVDALHRVTAQKSASLPSGSSIDGRKVRETADRVLAVAAKGKTRWSRAILTNPRLQHKL 122

Query: 121 KKHKKVKPVGNCSRPKKLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYI 180
           KK KKVK VGNCSR KKLKIKYE RKLPTVQRKVRTL RLVPGCRKISFPNLLEEASDYI
Sbjct: 123 KKQKKVKTVGNCSRAKKLKIKYERRKLPTVQRKVRTLSRLVPGCRKISFPNLLEEASDYI 182

Query: 181 AALQMQVRAMTAVAELLAGAPADRQSFRTNS 210
           +ALQMQVRAMTAVAELLAGAP DRQS RTNS
Sbjct: 183 SALQMQVRAMTAVAELLAGAPGDRQSLRTNS 209

[Close]
BLAST of ClCG03G017760 vs. TrEMBL
Match: A0A0K9RCQ0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_081330 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-42
Identity = 101/207 (48.79%), Postives = 135/207 (65.22%), Query Frame = 1 

Query: 1   MDAIASNLQDLTSSDFTEQRPCKRRKIESENQAAEICVAESADLRRRWRTESEQRIYSSK 60
           M +I SN ++ T     E +  KRR+I++ NQ      + +   + RWR+E+EQ+IYSSK
Sbjct: 1   MASIISNYEEHTEDTSRESKRKKRRRIDTVNQNQ----SNNNQNQIRWRSETEQQIYSSK 60

Query: 61  LVDALHRVTTQKSTSLPARSSIDGRKVRETADRVLAVAAKGKTRWSRAILTNRVELKVKK 120
           LV+AL  V  +  T  P   S   R +RE AD+ LA+AAKG+TRWSRAILTNR +L++K 
Sbjct: 61  LVEALRHVRRRNPTPAPVSGS---RAIREAADKALAIAAKGRTRWSRAILTNRRKLRLKS 120

Query: 121 HKKVK---------PVGNCSRPKKLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFPNLL 180
           HKK K         P       +      + +KLP + ++V+ LGRLVPGCRK+SFPNLL
Sbjct: 121 HKKAKVRSKLPPPPPPPGTGSSRLFGEDEQQQKLPALDKRVKVLGRLVPGCRKLSFPNLL 180

Query: 181 EEASDYIAALQMQVRAMTAVAELLAGA 199
           EEA+DYIAALQMQV+ M A+AELLAG+
Sbjct: 181 EEATDYIAALQMQVKTMAALAELLAGS 200

[Close]
BLAST of ClCG03G017760 vs. TrEMBL
Match: A5AMF3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026724 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.6e-42
Identity = 100/187 (53.48%), Postives = 134/187 (71.66%), Query Frame = 1 

Query: 23  KRRKIESENQAAEICVAESADLRRRWRTESEQRIYSSKLVDALHRVTTQKSTSLPARSSI 82
           KR+K+ES +Q  +           RWRTE+EQ+IYS+KLV+A+ +V   + +S PA +  
Sbjct: 23  KRKKMESGSQKVK--------RGGRWRTEAEQQIYSAKLVEAITKV---RRSSAPAAAVH 82

Query: 83  DGRKVRETADRVLAVAAKGKTRWSRAILTNRVELKVKKHKKVKPVGNCSRPKKLKIKYET 142
            GR VRE ADRVLA A KG+TRWSRAI+T+RV L+++K +KV   GN     +L+    +
Sbjct: 83  RGRAVREAADRVLAAAGKGRTRWSRAIMTSRVGLRLRKRRKVTVTGN----NRLRKPAVS 142

Query: 143 RKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYIAALQMQVRAMTAVAELLAGAPADR 202
           ++ P ++R+VR LGRLVPGCRK+SFPNLLEEA+DYIAAL+MQVRAMTA+AELLAG  A  
Sbjct: 143 KQEPPLKRRVRVLGRLVPGCRKLSFPNLLEEATDYIAALEMQVRAMTALAELLAGTGASS 194

Query: 203 QSFRTNS 210
            + +  S
Sbjct: 203 SNLQPPS 194

[Close]
BLAST of ClCG03G017760 vs. TrEMBL
Match: F6H714_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00750 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.3e-42
Identity = 102/203 (50.25%), Postives = 136/203 (67.00%), Query Frame = 1 

Query: 11  LTSSDFTEQRPCKRRKIESENQAAEICVAESADLRRRWRTESEQRIYSSKLVDALHRVTT 70
           +T+SD    R   +RK + +NQ       +      +W+++ +Q++YSSKL+ AL +V  
Sbjct: 10  VTNSD--RSRESSKRKKKKKNQIQSQVRDQQNQNHTKWKSQVQQQLYSSKLLQALRQVRL 69

Query: 71  QKSTSLPARSSIDGRKVRETADRVLAVAAKGKTRWSRAILTNRVELKVKKHKKVK-PVGN 130
             S   P R    GR VRE ADR LAVAAKG+TRWSRAILTNR++LK  KHK+ +  V  
Sbjct: 70  GSSNETPRR----GRAVREAADRALAVAAKGRTRWSRAILTNRLKLKFMKHKRQRVTVTG 129

Query: 131 CSRPKKLKI---KYETRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYIAALQMQVR 190
            +R KK K+   + + + LP VQRKVR LGRLVPGCRK+  P++LEEA+DYIAAL+MQVR
Sbjct: 130 QNRSKKPKVSILRLKGKNLPAVQRKVRVLGRLVPGCRKLPLPDILEEATDYIAALEMQVR 189

Query: 191 AMTAVAELLAGAPADRQSFRTNS 210
           AMTA+ ELL+GA A   +  +NS
Sbjct: 190 AMTALTELLSGAGAGASTTSSNS 206

[Close]
BLAST of ClCG03G017760 vs. TrEMBL
Match: B9RFK5_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1435500 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.6e-41
Identity = 107/205 (52.20%), Postives = 135/205 (65.85%), Query Frame = 1 

Query: 12  TSSDFTEQRPCKRRKI-----ESENQAAEICVAESADLRRRWRTESEQRIYSSKLVDALH 71
           TS  F  QR  KRRK+      S N      +A++A    RWRT+ EQ+IYSSKL+ AL 
Sbjct: 11  TSQQFDHQRK-KRRKLTHDQTSSSNSNNNQIIAQTAT---RWRTQPEQQIYSSKLLQALR 70

Query: 72  RVTTQKSTSLPARS---SIDGRKVRETADRVLAVAAKGKTRWSRAILTNRVELKVKKHKK 131
           R     S +  A +   +  GR++R+TAD+VLAVAAKG TRWSRAIL  ++ LKVKK KK
Sbjct: 71  RSRRTASAADDAAAVSPAAKGRQIRDTADKVLAVAAKGTTRWSRAILAGKLRLKVKKVKK 130

Query: 132 VKPVGNCSRPKKLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYIAALQM 191
           VK  G     ++ +   E ++LP V +KVR L RLVPGCRK SF N+LEEASDYIAAL+M
Sbjct: 131 VKVTGE----RRREAVRENKRLPAVDKKVRVLSRLVPGCRKASFSNILEEASDYIAALEM 190

Query: 192 QVRAMTAVAELLA----GAPADRQS 205
           QV+AMTA+ E+LA    G+P DR S
Sbjct: 191 QVKAMTALTEILAAGGGGSPVDRAS 207

[Close]
BLAST of ClCG03G017760 vs. TAIR10
Match: AT1G09250.1 (AT1G09250.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-40
Identity = 94/192 (48.96%), Postives = 125/192 (65.10%), Query Frame = 1 

Query: 12  TSSDFTEQRPCKRRKIESENQAAEICVAESADLRRRWRTESEQRIYSSKLVDALHRVTTQ 71
           T      ++P      E+E +A  +    + +  +RW+T   Q+IY+ KLV+AL RV  +
Sbjct: 12  TGESSRRKKPRISETAEAEIEARRV----NEESLKRWKTNRVQQIYACKLVEALRRVRQR 71

Query: 72  KSTSLPARSS--IDG--RKVRETADRVLAVAAKGKTRWSRAILTNRVELKVKKHKKV-KP 131
            ST+    +   + G  R++R+TADRVLA +A+G TRWSRAIL +RV  K+KKH+K  K 
Sbjct: 72  SSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKS 131

Query: 132 VGNCSRPKKLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYIAALQMQVR 191
            GNC   K L  +    KLP V+RK++ LGRLVPGCRK+S PNLL+EA+DYIAAL+MQVR
Sbjct: 132 TGNCKSRKGL-TETNRIKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVR 191

Query: 192 AMTAVAELLAGA 199
           AM A+AELL  A
Sbjct: 192 AMEALAELLTAA 198

[Close]
BLAST of ClCG03G017760 vs. TAIR10
Match: AT3G17100.1 (AT3G17100.1 sequence-specific DNA binding transcription factors)

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-37
Identity = 90/210 (42.86%), Postives = 129/210 (61.43%), Query Frame = 1 

Query: 4   IASNLQDLTSSDFTEQRPCKRRKIESENQAAEICVAESADLRRRWRTESEQRIYSSKLVD 63
           +++ L   T++     R  ++RK +S   + E   + S  L + WR+E +Q+IYS+KLV 
Sbjct: 7   VSNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLEK-WRSEKQQQIYSTKLVH 66

Query: 64  ALHRVTTQKSTSLPARSSID--GRKVRETADRVLAVAAKGKTRWSRAILTNRVELKVKKH 123
           AL  +   +  S  + SSI   GR VRE ADR LAVAA+GKT WSRAIL+  V+LK +KH
Sbjct: 67  ALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKH 126

Query: 124 KKVKPVGNCS---------RPKKLK---IKYETRKLPTVQRKVRTLGRLVPGCRKISFPN 183
           K+ + + N +         R KK +   ++ + + LP VQRKV+ L RLVPGCRK S P 
Sbjct: 127 KRQR-ISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPV 186

Query: 184 LLEEASDYIAALQMQVRAMTAVAELLAGAP 200
           +LEE +DYIAA++MQ+R MTA+   ++ +P
Sbjct: 187 VLEETTDYIAAMEMQIRTMTAILSAVSSSP 214

[Close]
BLAST of ClCG03G017760 vs. TAIR10
Match: AT3G06590.1 (AT3G06590.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36
Identity = 88/212 (41.51%), Postives = 125/212 (58.96%), Query Frame = 1 

Query: 1   MDAIASNLQDLTSSDFTEQRPCKRRKIESENQAAEICVAESADLRRRWRTESEQRIYSSK 60
           M ++ S+++  TS+     R  KR    S   +     + S ++  RWR+E +QRIYS+K
Sbjct: 1   MASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAK 60

Query: 61  LVDALH--RVTTQKSTSLPARSSIDGRKVRETADRVLAVAAKGKTRWSRAILTNRVELKV 120
           L  AL   R+ +  STS    +   G+ VRE ADR LAV+A+G+T WSRAIL NR++LK 
Sbjct: 61  LFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKF 120

Query: 121 KKHKK-------------VKPVGNCSRPKKLKI-KYETRKLPTVQRKVRTLGRLVPGCRK 180
           +K ++             V    N SR +++ + +   + +P V RKVR LGRLVPGC K
Sbjct: 121 RKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGK 180

Query: 181 ISFPNLLEEASDYIAALQMQVRAMTAVAELLA 197
            S P +LEEA+DYI AL+MQVRAM ++ +LL+
Sbjct: 181 QSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

[Close]
BLAST of ClCG03G017760 vs. TAIR10
Match: AT3G05800.1 (AT3G05800.1 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1)

HSP 1 Score: 122.9 bits (307), Expect = 2.4e-28
Identity = 73/175 (41.71%), Postives = 103/175 (58.86%), Query Frame = 1 

Query: 23  KRRKIESENQAAEICVAESADLRRRWRTESEQRIYSSKLVDALHRVTTQKSTSLPARSSI 82
           +R ++ SE        A    L RRWR  + Q++YS KL DAL R  +++S +       
Sbjct: 45  RRSRVSSEE-------APVRHLSRRWRATTAQKVYSLKLYDALQR--SRRSAT------- 104

Query: 83  DGRKVRETADRVLAVAAKGKTRWSRAILTNRVELKVKKHKKVKPVGNCSRP-KKLKIKYE 142
               VR+TAD+VLA  A+G TRWSRAIL +R    +++ +  KP    +   +       
Sbjct: 105 ----VRDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGSGR 164

Query: 143 TRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYIAALQMQVRAMTAVAELLA 197
            RKL  V  +VR LG LVPGCR+ + P LL+E +DYIAAL+MQVRAMTA++++L+
Sbjct: 165 RRKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILS 199

[Close]
BLAST of ClCG03G017760 vs. TAIR10
Match: AT2G43060.1 (AT2G43060.1 ILI1 binding bHLH 1)

HSP 1 Score: 52.0 bits (123), Expect = 5.2e-07
Identity = 40/148 (27.03%), Postives = 67/148 (45.27%), Query Frame = 1 

Query: 53  EQRIYSSKLVDALHRVTTQKSTSLPARSSIDGRKVRETADRVLAVAAKGKTR-WSRAILT 112
           E+ +++   + +L  +  Q     P + +   RK+++ A   +A AA G +R WSRA+L 
Sbjct: 14  EKDVFAFHFLQSLSNLRKQNPFDTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALLR 73

Query: 113 NRVELKVKKHKKVKPVGNCSRPK---KLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFP 172
                  +  K    +   SR K     K +   ++ P V+     L  LVPG   +   
Sbjct: 74  -------RADKDDNKIVRFSRRKWKISSKRRRSNQRAPVVEEAAERLRNLVPGGGGMETS 133

Query: 173 NLLEEASDYIAALQMQVRAMTAVAELLA 197
            L+EE + YI  L MQV+ M  + + L+
Sbjct: 134 KLMEETAHYIKCLSMQVKVMQCLVDGLS 154

[Close]
BLAST of ClCG03G017760 vs. NCBI nr
Match: gi|659099312|ref|XP_008450537.1| (PREDICTED: transcription factor bHLH149-like [Cucumis melo])

HSP 1 Score: 322.0 bits (824), Expect = 7.6e-85
Identity = 176/211 (83.41%), Postives = 183/211 (86.73%), Query Frame = 1 

Query: 1   MDAIASNLQDLTSSDFTEQ-RPCKRRKIESENQAAEICVAESADLRRRWRTESEQRIYSS 60
           MD I+SNLQ LTSS FTE  RP KRRKI+S     EI V ESAD R RW TESE RIYSS
Sbjct: 5   MDPISSNLQHLTSSHFTEDHRPTKRRKIQSP----EISVDESADSRTRWTTESEHRIYSS 64

Query: 61  KLVDALHRVTTQKSTSLPARSSIDGRKVRETADRVLAVAAKGKTRWSRAILTN-RVELKV 120
           KLVDALHRVT  KSTSLP+RSSIDGRKVRETADRVLAVAAKGKTRWSRAILTN R++ K+
Sbjct: 65  KLVDALHRVTAHKSTSLPSRSSIDGRKVRETADRVLAVAAKGKTRWSRAILTNPRLQRKL 124

Query: 121 KKHKKVKPVGNCSRPKKLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYI 180
           KK KKVK VGNCSR KKLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYI
Sbjct: 125 KKQKKVKTVGNCSRAKKLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYI 184

Query: 181 AALQMQVRAMTAVAELLAGAPADRQSFRTNS 210
           +ALQMQVRAMTAVAELL GAP D QS RTNS
Sbjct: 185 SALQMQVRAMTAVAELLGGAPVDLQSLRTNS 211

[Close]
BLAST of ClCG03G017760 vs. NCBI nr
Match: gi|449435946|ref|XP_004135755.1| (PREDICTED: transcription factor bHLH149-like [Cucumis sativus])

HSP 1 Score: 321.6 bits (823), Expect = 1.0e-84
Identity = 177/211 (83.89%), Postives = 183/211 (86.73%), Query Frame = 1 

Query: 1   MDAIASNLQDLTSSDFTE-QRPCKRRKIESENQAAEICVAESADLRRRWRTESEQRIYSS 60
           MD I+SNLQ LTSSDFTE QRP KRRKI S     EI V ESAD  RRW TESE RIYSS
Sbjct: 3   MDPISSNLQHLTSSDFTEDQRPSKRRKIHSP----EISVDESADSIRRWTTESEHRIYSS 62

Query: 61  KLVDALHRVTTQKSTSLPARSSIDGRKVRETADRVLAVAAKGKTRWSRAILTN-RVELKV 120
           KLVDALHRVT QKS SLP+ SSIDGRKVRETADRVLAVAAKGKTRWSRAILTN R++ K+
Sbjct: 63  KLVDALHRVTAQKSASLPSGSSIDGRKVRETADRVLAVAAKGKTRWSRAILTNPRLQHKL 122

Query: 121 KKHKKVKPVGNCSRPKKLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYI 180
           KK KKVK VGNCSR KKLKIKYE RKLPTVQRKVRTL RLVPGCRKISFPNLLEEASDYI
Sbjct: 123 KKQKKVKTVGNCSRAKKLKIKYERRKLPTVQRKVRTLSRLVPGCRKISFPNLLEEASDYI 182

Query: 181 AALQMQVRAMTAVAELLAGAPADRQSFRTNS 210
           +ALQMQVRAMTAVAELLAGAP DRQS RTNS
Sbjct: 183 SALQMQVRAMTAVAELLAGAPGDRQSLRTNS 209

[Close]
BLAST of ClCG03G017760 vs. NCBI nr
Match: gi|1009116651|ref|XP_015874890.1| (PREDICTED: transcription factor bHLH149 [Ziziphus jujuba])

HSP 1 Score: 185.7 bits (470), Expect = 8.5e-44
Identity = 111/201 (55.22%), Postives = 132/201 (65.67%), Query Frame = 1 

Query: 1   MDAIASNLQDLTSSDFTEQRPCKRRKIE--SENQAAEICVAESADLRRRWRTESEQRIYS 60
           M +  SNL+    +     R  KRRKIE  S  Q   +    S     RWR+++EQ IYS
Sbjct: 1   MASFISNLESNLDASIDSNRK-KRRKIEGLSTEQRPSL---NSETRTTRWRSDTEQLIYS 60

Query: 61  SKLVDALHRVTTQKSTSLPARSSIDGRKVRETADRVLAVAAKGKTRWSRAILTNRVELKV 120
           SKLV AL +  T  S   PA      R+VR+TADRVLA+AAKG TRWSRAIL +R+ L  
Sbjct: 61  SKLVQALRQARTNSS---PAEKFSGTRRVRDTADRVLALAAKGTTRWSRAILASRLRLNR 120

Query: 121 KKHKKVKPVGNCSRPKKLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYI 180
             HK+       SRP +L  K E RKLP +Q+KV+ LGRLVPGCRK+SFPNLLEEASDYI
Sbjct: 121 NLHKRKHRKAKVSRPNRLP-KTEMRKLPPMQKKVQVLGRLVPGCRKLSFPNLLEEASDYI 180

Query: 181 AALQMQVRAMTAVAELLAGAP 200
           AAL+MQVRAMTA+ ELLAG P
Sbjct: 181 AALEMQVRAMTALTELLAGTP 193

[Close]
BLAST of ClCG03G017760 vs. NCBI nr
Match: gi|902213453|gb|KNA17273.1| (hypothetical protein SOVF_081330 [Spinacia oleracea])

HSP 1 Score: 180.3 bits (456), Expect = 3.6e-42
Identity = 101/207 (48.79%), Postives = 135/207 (65.22%), Query Frame = 1 

Query: 1   MDAIASNLQDLTSSDFTEQRPCKRRKIESENQAAEICVAESADLRRRWRTESEQRIYSSK 60
           M +I SN ++ T     E +  KRR+I++ NQ      + +   + RWR+E+EQ+IYSSK
Sbjct: 1   MASIISNYEEHTEDTSRESKRKKRRRIDTVNQNQ----SNNNQNQIRWRSETEQQIYSSK 60

Query: 61  LVDALHRVTTQKSTSLPARSSIDGRKVRETADRVLAVAAKGKTRWSRAILTNRVELKVKK 120
           LV+AL  V  +  T  P   S   R +RE AD+ LA+AAKG+TRWSRAILTNR +L++K 
Sbjct: 61  LVEALRHVRRRNPTPAPVSGS---RAIREAADKALAIAAKGRTRWSRAILTNRRKLRLKS 120

Query: 121 HKKVK---------PVGNCSRPKKLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFPNLL 180
           HKK K         P       +      + +KLP + ++V+ LGRLVPGCRK+SFPNLL
Sbjct: 121 HKKAKVRSKLPPPPPPPGTGSSRLFGEDEQQQKLPALDKRVKVLGRLVPGCRKLSFPNLL 180

Query: 181 EEASDYIAALQMQVRAMTAVAELLAGA 199
           EEA+DYIAALQMQV+ M A+AELLAG+
Sbjct: 181 EEATDYIAALQMQVKTMAALAELLAGS 200

[Close]
BLAST of ClCG03G017760 vs. NCBI nr
Match: gi|147818278|emb|CAN64723.1| (hypothetical protein VITISV_026724 [Vitis vinifera])

HSP 1 Score: 179.1 bits (453), Expect = 8.0e-42
Identity = 100/187 (53.48%), Postives = 134/187 (71.66%), Query Frame = 1 

Query: 23  KRRKIESENQAAEICVAESADLRRRWRTESEQRIYSSKLVDALHRVTTQKSTSLPARSSI 82
           KR+K+ES +Q  +           RWRTE+EQ+IYS+KLV+A+ +V   + +S PA +  
Sbjct: 23  KRKKMESGSQKVK--------RGGRWRTEAEQQIYSAKLVEAITKV---RRSSAPAAAVH 82

Query: 83  DGRKVRETADRVLAVAAKGKTRWSRAILTNRVELKVKKHKKVKPVGNCSRPKKLKIKYET 142
            GR VRE ADRVLA A KG+TRWSRAI+T+RV L+++K +KV   GN     +L+    +
Sbjct: 83  RGRAVREAADRVLAAAGKGRTRWSRAIMTSRVGLRLRKRRKVTVTGN----NRLRKPAVS 142

Query: 143 RKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYIAALQMQVRAMTAVAELLAGAPADR 202
           ++ P ++R+VR LGRLVPGCRK+SFPNLLEEA+DYIAAL+MQVRAMTA+AELLAG  A  
Sbjct: 143 KQEPPLKRRVRVLGRLVPGCRKLSFPNLLEEATDYIAALEMQVRAMTALAELLAGTGASS 194

Query: 203 QSFRTNS 210
            + +  S
Sbjct: 203 SNLQPPS 194

The following BLAST results are available for this feature:
BLAST of ClCG03G017760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH149_ARATH2.2e-3948.96Transcription factor bHLH149 OS=Arabidopsis thaliana GN=BHLH149 PE=1 SV=1[more]
BH147_ARATH5.0e-3642.86Transcription factor bHLH147 OS=Arabidopsis thaliana GN=BHLH147 PE=1 SV=1[more]
BH148_ARATH1.9e-3541.51Transcription factor bHLH148 OS=Arabidopsis thaliana GN=BHLH148 PE=1 SV=1[more]
BH150_ARATH4.3e-2741.71Transcription factor bHLH150 OS=Arabidopsis thaliana GN=BHLH150 PE=1 SV=1[more]
IBH1_ARATH9.2e-0627.03Transcription factor IBH1 OS=Arabidopsis thaliana GN=IBH1 PE=1 SV=1[more]
BLAST of ClCG03G017760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVP8_CUCSA6.9e-8583.89Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555600 PE=4 SV=1[more]
A0A0K9RCQ0_SPIOL2.5e-4248.79Uncharacterized protein OS=Spinacia oleracea GN=SOVF_081330 PE=4 SV=1[more]
A5AMF3_VITVI5.6e-4253.48Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026724 PE=4 SV=1[more]
F6H714_VITVI7.3e-4250.25Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00750 PE=4 SV=... [more]
B9RFK5_RICCO3.6e-4152.20Transcription factor, putative OS=Ricinus communis GN=RCOM_1435500 PE=4 SV=1[more]
BLAST of ClCG03G017760 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09250.11.2e-4048.96 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G17100.12.8e-3742.86 sequence-specific DNA binding transcription factors[more]
AT3G06590.11.1e-3641.51 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G05800.12.4e-2841.71 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1[more]
AT2G43060.15.2e-0727.03 ILI1 binding bHLH 1[more]
BLAST of ClCG03G017760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659099312|ref|XP_008450537.1|7.6e-8583.41PREDICTED: transcription factor bHLH149-like [Cucumis melo][more]
gi|449435946|ref|XP_004135755.1|1.0e-8483.89PREDICTED: transcription factor bHLH149-like [Cucumis sativus][more]
gi|1009116651|ref|XP_015874890.1|8.5e-4455.22PREDICTED: transcription factor bHLH149 [Ziziphus jujuba][more]
gi|902213453|gb|KNA17273.1|3.6e-4248.79hypothetical protein SOVF_081330 [Spinacia oleracea][more]
gi|147818278|emb|CAN64723.1|8.0e-4253.48hypothetical protein VITISV_026724 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G017760.1ClCG03G017760.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 149..193
score: 1.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 132..181
score: 8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 135..197
score: 1.9
NoneNo IPR availablePANTHERPTHR33124FAMILY NOT NAMEDcoord: 23..209
score: 4.7
NoneNo IPR availablePANTHERPTHR33124:SF12TRANSCRIPTION FACTOR BHLH147-RELATEDcoord: 23..209
score: 4.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG03G017760Csa1G555600Cucumber (Chinese Long) v2cuwcgB040
ClCG03G017760Csa2G034620Cucumber (Chinese Long) v2cuwcgB135
ClCG03G017760MELO3C015253Melon (DHL92) v3.5.1mewcgB245
ClCG03G017760Cla019979Watermelon (97103) v1wcgwmB242
ClCG03G017760Cla005156Watermelon (97103) v1wcgwmB224
ClCG03G017760Cla97C03G068160Watermelon (97103) v2wcgwmbB186
ClCG03G017760Bhi02G001823Wax gourdwcgwgoB363
ClCG03G017760CSPI01G25490Wild cucumber (PI 183967)cpiwcgB042
ClCG03G017760Cucsa.050790Cucumber (Gy14) v1cgywcgB035
ClCG03G017760CmaCh10G011640Cucurbita maxima (Rimu)cmawcgB055
ClCG03G017760CmoCh10G012420Cucurbita moschata (Rifu)cmowcgB046
ClCG03G017760Lsi11G006440Bottle gourd (USVL1VR-Ls)lsiwcgB105
ClCG03G017760Lsi06G000520Bottle gourd (USVL1VR-Ls)lsiwcgB364
ClCG03G017760Cp4.1LG11g08680Cucurbita pepo (Zucchini)cpewcgB109
ClCG03G017760Cp4.1LG18g00210Cucurbita pepo (Zucchini)cpewcgB328
ClCG03G017760MELO3C015253.2Melon (DHL92) v3.6.1medwcgB237
ClCG03G017760CsaV3_1G037910Cucumber (Chinese Long) v3cucwcgB043
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
ClCG03G017760ClCG02G014830Watermelon (Charleston Gray)wcgwcgB125
The following block(s) are covering this gene:
GeneOrganismBlock
ClCG03G017760Cucumber (Chinese Long) v3cucwcgB053
ClCG03G017760Cucumber (Gy14) v1cgywcgB037
ClCG03G017760Cucurbita maxima (Rimu)cmawcgB114
ClCG03G017760Cucurbita moschata (Rifu)cmowcgB102
ClCG03G017760Wild cucumber (PI 183967)cpiwcgB049
ClCG03G017760Cucumber (Chinese Long) v2cuwcgB050
ClCG03G017760Cucurbita pepo (Zucchini)cpewcgB604
ClCG03G017760Cucumber (Gy14) v2cgybwcgB038
ClCG03G017760Cucumber (Gy14) v2cgybwcgB047