Carg05555 (gene) Silver-seed gourd

Overview
NameCarg05555
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTranscription factor, putative
LocationCucurbita_argyrosperma_scaffold_046 : 1151575 .. 1152183 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCATCTGTTCATTCGAACTCCGATCGCGCGCGGGAGTCTTCAAGGAGGCAGAAGAAGAAGAAAAGCCACGGCAACAGAGATCATCATCAAAACCAGAACCATATTAAATGGAAGTCTCAAGCGCAGCAAGAAATTTACTCGTCCAAGCTGGTCCGAGCATTGAATCAAGTGAGGCTCAGTCCTCCGAACGAGGCGCCGCGCCGCGGCAGAGCCGTACGCGAGGCCGCTGACAGAGTCCTCGCCGTCGCTGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATCTTAACGAACAGGCTGAAACTCAAATTCAGGAAGCCGAAAAGACAGAGATCGGCATCCACCGCCGGAAACAACCGCTCAAAGAAACCTAGAGTTAGCGTATTGCGGTTGAGAGGGAAATCCTTACCGGCGGTACAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAGGAACCGTTGCCGGTTATCCTGGAAGAGGCTACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCCATGAGTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGCCGCAGGCTCTAGCTCCGCCCCACCAAACTGA

mRNA sequence

ATGGCGTCATCTGTTCATTCGAACTCCGATCGCGCGCGGGAGTCTTCAAGGAGGCAGAAGAAGAAGAAAAGCCACGGCAACAGAGATCATCATCAAAACCAGAACCATATTAAATGGAAGTCTCAAGCGCAGCAAGAAATTTACTCGTCCAAGCTGGTCCGAGCATTGAATCAAGTGAGGCTCAGTCCTCCGAACGAGGCGCCGCGCCGCGGCAGAGCCGTACGCGAGGCCGCTGACAGAGTCCTCGCCGTCGCTGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATCTTAACGAACAGGCTGAAACTCAAATTCAGGAAGCCGAAAAGACAGAGATCGGCATCCACCGCCGGAAACAACCGCTCAAAGAAACCTAGAGTTAGCGTATTGCGGTTGAGAGGGAAATCCTTACCGGCGGTACAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAGGAACCGTTGCCGGTTATCCTGGAAGAGGCTACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCCATGAGTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGCCGCAGGCTCTAGCTCCGCCCCACCAAACTGA

Coding sequence (CDS)

ATGGCGTCATCTGTTCATTCGAACTCCGATCGCGCGCGGGAGTCTTCAAGGAGGCAGAAGAAGAAGAAAAGCCACGGCAACAGAGATCATCATCAAAACCAGAACCATATTAAATGGAAGTCTCAAGCGCAGCAAGAAATTTACTCGTCCAAGCTGGTCCGAGCATTGAATCAAGTGAGGCTCAGTCCTCCGAACGAGGCGCCGCGCCGCGGCAGAGCCGTACGCGAGGCCGCTGACAGAGTCCTCGCCGTCGCTGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATCTTAACGAACAGGCTGAAACTCAAATTCAGGAAGCCGAAAAGACAGAGATCGGCATCCACCGCCGGAAACAACCGCTCAAAGAAACCTAGAGTTAGCGTATTGCGGTTGAGAGGGAAATCCTTACCGGCGGTACAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAGGAACCGTTGCCGGTTATCCTGGAAGAGGCTACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCCATGAGTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGCCGCAGGCTCTAGCTCCGCCCCACCAAACTGA

Protein sequence

MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVRLSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSAAGSSSAPPN
Homology
[Close]
BLAST of Carg05555 vs. NCBI nr
Match: XP_022959317.1 (transcription factor bHLH147-like [Cucurbita moschata] >XP_023548462.1 transcription factor bHLH147-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.6 bits (823), Expect = 1.9e-84
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 

Query: 1   MASSVHSNSDRAREXXXXXXXXXXXXXXXXXXXXXHIKWKSQAQQEIYSSKLVRALNQVR 60
           MASSVHSNSDRAREXXXXXXXXXXXXXXXXXXXXXHIKWKSQAQQEIYSSKLVRALNQVR
Sbjct: 1   MASSVHSNSDRAREXXXXXXXXXXXXXXXXXXXXXHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 61  LSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNN 120
           LSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNN
Sbjct: 61  LSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNN 120

Query: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180
           RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM
Sbjct: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180

Query: 181 SALAELLSASTSAAGSSSAPPN 203
           SALAELLSASTSAAGSSSAPPN
Sbjct: 181 SALAELLSASTSAAGSSSAPPN 202

[Close]
BLAST of Carg05555 vs. NCBI nr
Match: XP_023006264.1 (transcription factor bHLH147-like [Cucurbita maxima])

HSP 1 Score: 317.8 bits (813), Expect = 2.7e-83
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0 

Query: 1   MASSVHSNSDRAREXXXXXXXXXXXXXXXXXXXXXHIKWKSQAQQEIYSSKLVRALNQVR 60
           MASSVHSNSDRAREXXXXXXXXXXXXXXXXXXXXXHIKWKSQAQQEIYSSKLVRALNQVR
Sbjct: 1   MASSVHSNSDRAREXXXXXXXXXXXXXXXXXXXXXHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 61  LSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNN 120
           LSPPNE PRRGRAVREAADRVLAVAAKGRTRWSRAIL NRLKLKFRKPKRQRSASTAGNN
Sbjct: 61  LSPPNEGPRRGRAVREAADRVLAVAAKGRTRWSRAILKNRLKLKFRKPKRQRSASTAGNN 120

Query: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180
           RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM
Sbjct: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180

Query: 181 SALAELLSASTSAAGSSSAPPN 203
           SALAELLSASTSAAGSSSAPPN
Sbjct: 181 SALAELLSASTSAAGSSSAPPN 202

[Close]
BLAST of Carg05555 vs. NCBI nr
Match: XP_023514807.1 (transcription factor bHLH147-like [Cucurbita pepo subsp. pepo] >XP_023514808.1 transcription factor bHLH147-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.0 bits (741), Expect = 6.0e-75
Identity = 187/202 (92.57%), Postives = 193/202 (95.54%), Query Frame = 0 

Query: 1   MASSVHSNSDRAREXXXXXXXXXXXXXXXXXXXXXHIKWKSQAQQEIYSSKLVRALNQVR 60
           MASSV SNSDR RE XXXXXXXXXXXXXXXXXXXX I WKSQAQ+EIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESXXXXXXXXXXXXXXXXXXXXXINWKSQAQKEIYSSKLVRALNQVR 60

Query: 61  LSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNN 120
           LSP NEAPRRGRAVREAADR+LAVAAKGRTRWSRAILTNRLKLKFRKPK+QR ASTAGNN
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQR-ASTAGNN 120

Query: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180
           R KKPRVSVLRL+GK+LPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM
Sbjct: 121 RPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180

Query: 181 SALAELLSASTSAAGSSSAPPN 203
           SALAELLSASTS AGSSSAPP+
Sbjct: 181 SALAELLSASTSVAGSSSAPPS 201

[Close]
BLAST of Carg05555 vs. NCBI nr
Match: XP_008458338.1 (PREDICTED: transcription factor bHLH147-like [Cucumis melo] >XP_008458339.1 PREDICTED: transcription factor bHLH147-like [Cucumis melo])

HSP 1 Score: 287.0 bits (733), Expect = 5.1e-74
Identity = 193/206 (93.69%), Postives = 197/206 (95.63%), Query Frame = 0 

Query: 1   MASSVHSNSDRAR--EXXXXXXXXXXXXXXXXXXXXXHIKWKSQAQQEIYSSKLVRALNQ 60
           MASSV SNSDRAR   XXXXXXXXXXXXXXXXXXXXX IKWKSQAQQEIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARXXXXXXXXXXXXXXXXXXXXXXXXXIKWKSQAQQEIYSSKLVRALNQ 60

Query: 61  VRLSPPNEA-PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK-PKRQRSAST 120
           VRLSP NEA PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK P+RQRS S+
Sbjct: 61  VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPRRQRSTSS 120

Query: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180
           AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 181 VRAMSALAELLSASTSAAGSSSAPPN 203
           VRAMSALAELLSASTSAAGSSS+PP+
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]
BLAST of Carg05555 vs. NCBI nr
Match: XP_004148798.1 (PREDICTED: transcription factor bHLH147 [Cucumis sativus] >XP_004148799.1 PREDICTED: transcription factor bHLH147 [Cucumis sativus] >KGN47455.1 hypothetical protein Csa_6G327940 [Cucumis sativus])

HSP 1 Score: 286.2 bits (731), Expect = 8.7e-74
Identity = 193/206 (93.69%), Postives = 195/206 (94.66%), Query Frame = 0 

Query: 1   MASSVHSNSDRAR--EXXXXXXXXXXXXXXXXXXXXXHIKWKSQAQQEIYSSKLVRALNQ 60
           MASSV SNSDRAR   XXXXXXXXXXXXXXXXXXXXX  KWKSQAQQEIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARXXXXXXXXXXXXXXXXXXXXXXXXXXKWKSQAQQEIYSSKLVRALNQ 60

Query: 61  VRLSPPNEA-PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK-PKRQRSAST 120
           VRL P NEA PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK PKRQRS ST
Sbjct: 61  VRLGPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPKRQRSTST 120

Query: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180
           AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 181 VRAMSALAELLSASTSAAGSSSAPPN 203
           VRAMSALAELLSASTSAAGSSS+PP+
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]
BLAST of Carg05555 vs. TAIR10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 177.9 bits (450), Expect = 6.1e-45
Identity = 106/173 (61.27%), Postives = 129/173 (74.57%), Query Frame = 0 

Query: 36  HIKWKSQAQQEIYSSKLVRALNQVRL------SPPNEAPRRGRAVREAADRVLAVAAKGR 95
           H +W+S+ QQ IYS+KL +AL QVRL      S    A +RG+AVREAADR LAV+A+GR
Sbjct: 45  HARWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGR 104

Query: 96  TRWSRAILTNRLKLKFRKPKRQRSAS---------TAGNNRSKKPRVSVLRLRGKSLPAV 155
           T WSRAIL NR+KLKFRK +R R+           ++ +NRS+K RVSVLRL  KS+P V
Sbjct: 105 TLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDV 164

Query: 156 QRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSA 194
            RKVRVLGRLVPGC K+ +PVILEEATDYI ALEMQVRAM++L +LLS+  SA
Sbjct: 165 NRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSA 217

[Close]
BLAST of Carg05555 vs. TAIR10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors)

HSP 1 Score: 174.9 bits (442), Expect = 5.1e-44
Identity = 99/165 (60.00%), Postives = 125/165 (75.76%), Query Frame = 0 

Query: 38  KWKSQAQQEIYSSKLVRALNQVRL------SPPNEAPRRGRAVREAADRVLAVAAKGRTR 97
           KW+S+ QQ+IYS+KLV AL ++R+      S  +  PR GRAVRE ADR LAVAA+G+T 
Sbjct: 49  KWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTL 108

Query: 98  WSRAILTNRLKLKFRKPKRQRSAS------TAGNNRSKKPRVSVLRLRGKSLPAVQRKVR 157
           WSRAIL+  +KLKFRK KRQR ++      T G+ RSKK R +VLRL+ K LPAVQRKV+
Sbjct: 109 WSRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVK 168

Query: 158 VLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSAS 191
           VL RLVPGCRK+ LPV+LEE TDYIAA+EMQ+R M+A+   +S+S
Sbjct: 169 VLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSSS 213

[Close]
BLAST of Carg05555 vs. TAIR10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-31
Identity = 81/161 (50.31%), Postives = 114/161 (70.81%), Query Frame = 0 

Query: 38  KWKSQAQQEIYSSKLVRALNQVR----LSPPNEAPR----RGRAVREAADRVLAVAAKGR 97
           +WK+   Q+IY+ KLV AL +VR     +  NE  +      R +R+ ADRVLA +A+G 
Sbjct: 43  RWKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGT 102

Query: 98  TRWSRAILTNRLKLKFRKPKRQRSASTAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGR 157
           TRWSRAIL +R++ K +K ++ + ++  GN +S+K      R++   LPAV+RK+++LGR
Sbjct: 103 TRWSRAILASRVRAKLKKHRKAKKST--GNCKSRKGLTETNRIK---LPAVERKLKILGR 162

Query: 158 LVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSAS 191
           LVPGCRK  +P +L+EATDYIAALEMQVRAM ALAELL+A+
Sbjct: 163 LVPGCRKVSVPNLLDEATDYIAALEMQVRAMEALAELLTAA 198

[Close]
BLAST of Carg05555 vs. TAIR10
Match: AT3G05800.1 (AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1)

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18
Identity = 61/126 (48.41%), Postives = 79/126 (62.70%), Query Frame = 0 

Query: 74  VREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNNRSKKPRVSVLRLR 133
           VR+ AD+VLA  A+G TRWSRAIL +R     R+ +  + AS      +   R S    R
Sbjct: 89  VRDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASAL----AAAIRGSGGSGR 148

Query: 134 GKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSA 193
            + L AV  +VRVLG LVPGCR+  LP +L+E  DYIAALEMQVRAM+AL+++LS    +
Sbjct: 149 RRKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQPS 208

Query: 194 AGSSSA 200
               SA
Sbjct: 209 TNLGSA 210

[Close]
BLAST of Carg05555 vs. Swiss-Prot
Match: sp|Q9C8Z9|BH148_ARATH (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-43
Identity = 106/173 (61.27%), Postives = 129/173 (74.57%), Query Frame = 0 

Query: 36  HIKWKSQAQQEIYSSKLVRALNQVRL------SPPNEAPRRGRAVREAADRVLAVAAKGR 95
           H +W+S+ QQ IYS+KL +AL QVRL      S    A +RG+AVREAADR LAV+A+GR
Sbjct: 45  HARWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGR 104

Query: 96  TRWSRAILTNRLKLKFRKPKRQRSAS---------TAGNNRSKKPRVSVLRLRGKSLPAV 155
           T WSRAIL NR+KLKFRK +R R+           ++ +NRS+K RVSVLRL  KS+P V
Sbjct: 105 TLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDV 164

Query: 156 QRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSA 194
            RKVRVLGRLVPGC K+ +PVILEEATDYI ALEMQVRAM++L +LLS+  SA
Sbjct: 165 NRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSA 217

[Close]
BLAST of Carg05555 vs. Swiss-Prot
Match: sp|Q9LSN7|BH147_ARATH (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 9.3e-43
Identity = 99/165 (60.00%), Postives = 125/165 (75.76%), Query Frame = 0 

Query: 38  KWKSQAQQEIYSSKLVRALNQVRL------SPPNEAPRRGRAVREAADRVLAVAAKGRTR 97
           KW+S+ QQ+IYS+KLV AL ++R+      S  +  PR GRAVRE ADR LAVAA+G+T 
Sbjct: 49  KWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTL 108

Query: 98  WSRAILTNRLKLKFRKPKRQRSAS------TAGNNRSKKPRVSVLRLRGKSLPAVQRKVR 157
           WSRAIL+  +KLKFRK KRQR ++      T G+ RSKK R +VLRL+ K LPAVQRKV+
Sbjct: 109 WSRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVK 168

Query: 158 VLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSAS 191
           VL RLVPGCRK+ LPV+LEE TDYIAA+EMQ+R M+A+   +S+S
Sbjct: 169 VLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSSS 213

[Close]
BLAST of Carg05555 vs. Swiss-Prot
Match: sp|O80482|BH149_ARATH (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.4e-30
Identity = 81/161 (50.31%), Postives = 114/161 (70.81%), Query Frame = 0 

Query: 38  KWKSQAQQEIYSSKLVRALNQVR----LSPPNEAPR----RGRAVREAADRVLAVAAKGR 97
           +WK+   Q+IY+ KLV AL +VR     +  NE  +      R +R+ ADRVLA +A+G 
Sbjct: 43  RWKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGT 102

Query: 98  TRWSRAILTNRLKLKFRKPKRQRSASTAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGR 157
           TRWSRAIL +R++ K +K ++ + ++  GN +S+K      R++   LPAV+RK+++LGR
Sbjct: 103 TRWSRAILASRVRAKLKKHRKAKKST--GNCKSRKGLTETNRIK---LPAVERKLKILGR 162

Query: 158 LVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSAS 191
           LVPGCRK  +P +L+EATDYIAALEMQVRAM ALAELL+A+
Sbjct: 163 LVPGCRKVSVPNLLDEATDYIAALEMQVRAMEALAELLTAA 198

[Close]
BLAST of Carg05555 vs. Swiss-Prot
Match: sp|Q9M9L6|BH150_ARATH (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.0e-17
Identity = 61/126 (48.41%), Postives = 79/126 (62.70%), Query Frame = 0 

Query: 74  VREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNNRSKKPRVSVLRLR 133
           VR+ AD+VLA  A+G TRWSRAIL +R     R+ +  + AS      +   R S    R
Sbjct: 89  VRDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASAL----AAAIRGSGGSGR 148

Query: 134 GKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSA 193
            + L AV  +VRVLG LVPGCR+  LP +L+E  DYIAALEMQVRAM+AL+++LS    +
Sbjct: 149 RRKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQPS 208

Query: 194 AGSSSA 200
               SA
Sbjct: 209 TNLGSA 210

[Close]
BLAST of Carg05555 vs. TrEMBL
Match: tr|A0A1S3C760|A0A1S3C760_CUCME (transcription factor bHLH147-like OS=Cucumis melo OX=3656 GN=LOC103497780 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.4e-74
Identity = 193/206 (93.69%), Postives = 197/206 (95.63%), Query Frame = 0 

Query: 1   MASSVHSNSDRAR--EXXXXXXXXXXXXXXXXXXXXXHIKWKSQAQQEIYSSKLVRALNQ 60
           MASSV SNSDRAR   XXXXXXXXXXXXXXXXXXXXX IKWKSQAQQEIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARXXXXXXXXXXXXXXXXXXXXXXXXXIKWKSQAQQEIYSSKLVRALNQ 60

Query: 61  VRLSPPNEA-PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK-PKRQRSAST 120
           VRLSP NEA PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK P+RQRS S+
Sbjct: 61  VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPRRQRSTSS 120

Query: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180
           AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 181 VRAMSALAELLSASTSAAGSSSAPPN 203
           VRAMSALAELLSASTSAAGSSS+PP+
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]
BLAST of Carg05555 vs. TrEMBL
Match: tr|A0A0A0KCL4|A0A0A0KCL4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327940 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 5.8e-74
Identity = 193/206 (93.69%), Postives = 195/206 (94.66%), Query Frame = 0 

Query: 1   MASSVHSNSDRAR--EXXXXXXXXXXXXXXXXXXXXXHIKWKSQAQQEIYSSKLVRALNQ 60
           MASSV SNSDRAR   XXXXXXXXXXXXXXXXXXXXX  KWKSQAQQEIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARXXXXXXXXXXXXXXXXXXXXXXXXXXKWKSQAQQEIYSSKLVRALNQ 60

Query: 61  VRLSPPNEA-PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK-PKRQRSAST 120
           VRL P NEA PRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRK PKRQRS ST
Sbjct: 61  VRLGPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPKRQRSTST 120

Query: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180
           AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 181 VRAMSALAELLSASTSAAGSSSAPPN 203
           VRAMSALAELLSASTSAAGSSS+PP+
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]
BLAST of Carg05555 vs. TrEMBL
Match: tr|A0A0D2VPG2|A0A0D2VPG2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G201700 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.3e-54
Identity = 125/170 (73.53%), Postives = 146/170 (85.88%), Query Frame = 0 

Query: 36  HIKWKSQAQQEIYSSKLVRALNQVRL-SPPNEAPRRGRAVREAADRVLAVAAKGRTRWSR 95
           H +WKS+AQQ+IYSSKL++AL+QV L +P + APR GRAVREAADR LAVAAKGRTRWSR
Sbjct: 34  HARWKSEAQQQIYSSKLLQALSQVSLNTPSSSAPRGGRAVREAADRALAVAAKGRTRWSR 93

Query: 96  AILTNRLKLKFRKPKRQRS---ASTAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLV 155
           AILT+RLKLKFRK KRQR    A+  G++R KKPR SV +L+ KSLPAVQRKV+VLGRLV
Sbjct: 94  AILTSRLKLKFRKQKRQRGVAVAAVTGSSRWKKPRFSVSKLKSKSLPAVQRKVKVLGRLV 153

Query: 156 PGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSAAGSSSAPP 202
           PGCRK+PLP+ILEEATDYIAALEMQVRAM+ LAELLS S +A+  S+ PP
Sbjct: 154 PGCRKQPLPIILEEATDYIAALEMQVRAMTTLAELLSGSGAASSGSALPP 203

[Close]
BLAST of Carg05555 vs. TrEMBL
Match: tr|A0A2R6PWM9|A0A2R6PWM9_ACTCH (Transcription factor bHLH147 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc24532 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.9e-54
Identity = 124/171 (72.51%), Postives = 144/171 (84.21%), Query Frame = 0 

Query: 38  KWKSQAQQEIYSSKLVRALNQVRLSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAIL 97
           +WKS AQQ++YSSKL++AL QVR+   + APRR RAVREAADRVLAV AKG+TRWSRAIL
Sbjct: 46  QWKSDAQQQVYSSKLLQALRQVRIGSSSTAPRRSRAVREAADRVLAVTAKGKTRWSRAIL 105

Query: 98  TNRLKLKFRKPKRQRSASTAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKE 157
           T+RLKLKF K KR+  A++A + R KKPRVS+LRL+ K+LPAVQRK RVLGRLVPGCRKE
Sbjct: 106 TSRLKLKFMKNKRRSPAASAASGRPKKPRVSILRLKSKNLPAVQRKARVLGRLVPGCRKE 165

Query: 158 PLPVILEEATDYIAALEMQVRAMSALAELLSASTSAA------GSSSAPPN 203
           PLPVILEEATDYIAALEMQVRAMSALAELLS S S++      GS+  PP+
Sbjct: 166 PLPVILEEATDYIAALEMQVRAMSALAELLSGSGSSSSTLTQLGSNRPPPS 216

[Close]
BLAST of Carg05555 vs. TrEMBL
Match: tr|A0A2C9W990|A0A2C9W990_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G206200 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.9e-54
Identity = 126/165 (76.36%), Postives = 145/165 (87.88%), Query Frame = 0 

Query: 36  HIKWKSQAQQEIYSSKLVRALNQVRLSPPN-EAPRRGRAVREAADRVLAVAAKGRTRWSR 95
           H KWK++AQQ+IYS+KL++AL+QVRL+P +  APR+GRAVREAADR LA AAKGRTRWSR
Sbjct: 39  HAKWKTEAQQQIYSTKLIQALSQVRLTPSSPSAPRQGRAVREAADRALAFAAKGRTRWSR 98

Query: 96  AILTNRLKLKFRKP-KRQRSASTA------GNNRSKKPRVSVLRLRGKSLPAVQRKVRVL 155
           AILT+R+KLKFRK  KRQR  +++      G +RSKKPR SVLRL+GKSLPAVQRKV VL
Sbjct: 99  AILTSRIKLKFRKQNKRQRVVASSAVSTVTGTSRSKKPRFSVLRLKGKSLPAVQRKVGVL 158

Query: 156 GRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTS 193
           GRLVPGCRK+PLPVILEEATDYIAALEMQVRAMSALAELLS S+S
Sbjct: 159 GRLVPGCRKQPLPVILEEATDYIAALEMQVRAMSALAELLSGSSS 203

The following BLAST results are available for this feature:
BLAST of Carg05555 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022959317.11.9e-84100.00transcription factor bHLH147-like [Cucurbita moschata] >XP_023548462.1 transcrip... [more]
XP_023006264.12.7e-8399.01transcription factor bHLH147-like [Cucurbita maxima][more]
XP_023514807.16.0e-7592.57transcription factor bHLH147-like [Cucurbita pepo subsp. pepo] >XP_023514808.1 t... [more]
XP_008458338.15.1e-7493.69PREDICTED: transcription factor bHLH147-like [Cucumis melo] >XP_008458339.1 PRED... [more]
XP_004148798.18.7e-7493.69PREDICTED: transcription factor bHLH147 [Cucumis sativus] >XP_004148799.1 PREDIC... [more]
BLAST of Carg05555 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06590.16.1e-4561.27basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G17100.15.1e-4460.00sequence-specific DNA binding transcription factors[more]
AT1G09250.11.3e-3150.31basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G05800.11.7e-1848.41AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1[more]
BLAST of Carg05555 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9C8Z9|BH148_ARATH1.1e-4361.27Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=... [more]
sp|Q9LSN7|BH147_ARATH9.3e-4360.00Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=... [more]
sp|O80482|BH149_ARATH2.4e-3050.31Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=... [more]
sp|Q9M9L6|BH150_ARATH3.0e-1748.41Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=... [more]
BLAST of Carg05555 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C760|A0A1S3C760_CUCME3.4e-7493.69transcription factor bHLH147-like OS=Cucumis melo OX=3656 GN=LOC103497780 PE=4 S... [more]
tr|A0A0A0KCL4|A0A0A0KCL4_CUCSA5.8e-7493.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327940 PE=4 SV=1[more]
tr|A0A0D2VPG2|A0A0D2VPG2_GOSRA2.3e-5473.53Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G201700 PE=4 ... [more]
tr|A0A2R6PWM9|A0A2R6PWM9_ACTCH3.9e-5472.51Transcription factor bHLH147 like OS=Actinidia chinensis var. chinensis OX=15908... [more]
tr|A0A2C9W990|A0A2C9W990_MANES3.9e-5476.36Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G206200 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR036638HLH_DNA-bd_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05555-RACarg05555-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..127
NoneNo IPR availablePANTHERPTHR33124FAMILY NOT NAMEDcoord: 6..200
NoneNo IPR availablePANTHERPTHR33124:SF33TRANSCRIPTION FACTOR BHLH148coord: 6..200
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILYSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 143..190

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg05555Cla019979Watermelon (97103) v1carwmB0071
Carg05555Cla009236Watermelon (97103) v1carwmB0073
Carg05555Cla021804Watermelon (97103) v1carwmB0070
Carg05555Csa6G327940Cucumber (Chinese Long) v2carcuB0081
Carg05555Csa3G168390Cucumber (Chinese Long) v2carcuB0071
Carg05555Csa2G034620Cucumber (Chinese Long) v2carcuB0070
Carg05555MELO3C021260Melon (DHL92) v3.5.1carmeB0067
Carg05555MELO3C006722Melon (DHL92) v3.5.1carmeB0074
Carg05555ClCG06G004500Watermelon (Charleston Gray)carwcgB0073
Carg05555ClCG02G014830Watermelon (Charleston Gray)carwcgB0071
Carg05555CSPI02G04790Wild cucumber (PI 183967)carcpiB0073
Carg05555CSPI03G15070Wild cucumber (PI 183967)carcpiB0075
Carg05555CSPI06G17730Wild cucumber (PI 183967)carcpiB0085
Carg05555Cucsa.252470Cucumber (Gy14) v1carcgyB0083
Carg05555Cucsa.090560Cucumber (Gy14) v1carcgyB0076
Carg05555Cucsa.247060Cucumber (Gy14) v1carcgyB0082
Carg05555CmaCh17G003760Cucurbita maxima (Rimu)carcmaB0091
Carg05555CmaCh08G012850Cucurbita maxima (Rimu)carcmaB0096
Carg05555CmaCh06G015690Cucurbita maxima (Rimu)carcmaB0095
Carg05555CmoCh17G003650Cucurbita moschata (Rifu)carcmoB0097
Carg05555CmoCh05G010780Cucurbita moschata (Rifu)carcmoB0101
Carg05555CmoCh08G012510Cucurbita moschata (Rifu)carcmoB0104
Carg05555CmoCh14G016150Cucurbita moschata (Rifu)carcmoB0096
Carg05555Lsi11G006440Bottle gourd (USVL1VR-Ls)carlsiB062
Carg05555Lsi09G015030Bottle gourd (USVL1VR-Ls)carlsiB061
Carg05555Cp4.1LG07g08560Cucurbita pepo (Zucchini)carcpeB0108
Carg05555Cp4.1LG11g08680Cucurbita pepo (Zucchini)carcpeB0098
Carg05555Cp4.1LG12g03270Cucurbita pepo (Zucchini)carcpeB0099
Carg05555Cp4.1LG17g00290Cucurbita pepo (Zucchini)carcpeB0102
Carg05555Cp4.1LG03g11920Cucurbita pepo (Zucchini)carcpeB0106
Carg05555Cp4.1LG08g05360Cucurbita pepo (Zucchini)carcpeB0109
Carg05555CsGy2G004930Cucumber (Gy14) v2carcgybB0070
Carg05555CsGy6G017340Cucumber (Gy14) v2carcgybB0080
Carg05555CsGy3G015210Cucumber (Gy14) v2carcgybB0072
Carg05555MELO3C021260.2Melon (DHL92) v3.6.1carmedB0068
Carg05555MELO3C006722.2Melon (DHL92) v3.6.1carmedB0075
Carg05555CsaV3_6G028530Cucumber (Chinese Long) v3carcucB0087
Carg05555CsaV3_3G015270Cucumber (Chinese Long) v3carcucB0079
Carg05555CsaV3_2G007180Cucumber (Chinese Long) v3carcucB0077
Carg05555Cla97C02G040620Watermelon (97103) v2carwmbB0068
Carg05555Cla97C05G088250Watermelon (97103) v2carwmbB0069
Carg05555Cla97C06G113920Watermelon (97103) v2carwmbB0070
Carg05555Bhi12G001737Wax gourdcarwgoB0080
Carg05555Bhi06G001346Wax gourdcarwgoB0085
Carg05555Bhi01G000789Wax gourdcarwgoB0086
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg05555Carg19614Silver-seed gourdcarcarB079
Carg05555Carg11997Silver-seed gourdcarcarB081
Carg05555Carg18894Silver-seed gourdcarcarB085
The following block(s) are covering this gene:
GeneOrganismBlock
Carg05555Watermelon (97103) v2carwmbB0067
Carg05555Wax gourdcarwgoB0079
Carg05555Cucurbita maxima (Rimu)carcmaB0089
Carg05555Cucurbita moschata (Rifu)carcmoB0095
Carg05555Cucurbita moschata (Rifu)carcmoB0103
Carg05555Bottle gourd (USVL1VR-Ls)carlsiB064
Carg05555Watermelon (Charleston Gray)carwcgB0070
Carg05555Watermelon (Charleston Gray)carwcgB0072
Carg05555Watermelon (97103) v1carwmB0068