Carg18894 (gene) Silver-seed gourd

Overview
NameCarg18894
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTranscription factor, putative
LocationCucurbita_argyrosperma_scaffold_162 : 311556 .. 312781 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAATGCAAAGAGTAAGTAAAGAAAGGCGGAAGGAGTCCCAAGGCTTTGGGTGTATGGCTAGGGCTGAATAAAATAGGAGTGAGATCCGAATCAATAAATATGAATTCTGGTTGCTTCACAACTTTATCTCCCTTCTCCCTCTCTCTCTCTACCCACTTGCAGAAGAGGACACCTTAAGAGCGGGTTCCATTTATGTCTTTTCGCTCTCCTAACCCTCTGTTTCATCTTCTTCACAGTTCTTATGTTTTGGTTGATCCAGGTTTCGTCTTCGAAGGAATTTCCCCAAAAGGTACGAATCTTATCAACTCCTTCTCTTGCCTTCTTCCTCCTATTATCATTACAATTTTTAATCTTCCTTTCTCCGGTTCCCAAGAATTTTCAATTTCTATTCTTCATTTGGGAGTTTCCGTTTCTGTTAGTCTAAATCTGTCATTTCCTTTTGATCCTTCCTTCCTCAGGATATCTTCTTTGCTTGCTCTTGTTCCGTTAGGTGAAACATAAATTTGGAGAAGAGAGATTGGATCATTGGTCCATCTTTGAATCGTCGATTTGTTGAGGGTAACCAATTTTTGTTTTTGTTTTTTTTTTTTTTGAGATCGGATCGGTGCGTCTTGATGGCGTCATCTGTTCTTTCGAACTCCGATCGCATGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAACCACGGCAACAGAGACCGTCATCAAAACCAGAACCATATTAACTGGAAATCTCAAGCTCAGAAAGAAATTTACTCGTCTAAGCTGGTTCGAGCGTTGAATCAAGTGAGGCTCAGTCCTTCGAATGAGGCGCCCCGCCGTGGTAGAGCCGTACGCGAGGCCGCCGACAGAATCCTTGCCGTCGCCGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATTCTAACGAATAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAAACAGAGAGCATCCACCGCTGGAAACAACCGCCCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAAAGGAAAAACGTTGCCGGCGGTGCAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCTGGTTGCCGGAAAGAACCTTGGCCGGTTATCCTAGAAGAGGCCACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCTATGACTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGTTGCAGGCTCTAGCTCCGCTCCTCCAAGCTGA

mRNA sequence

ATGGCTGAATGCAAAGAGTTTCGTCTTCGAAGGAATTTCCCCAAAAGATCGGATCGGTGCGTCTTGATGGCGTCATCTGTTCTTTCGAACTCCGATCGCATGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAACCACGGCAACAGAGACCGTCATCAAAACCAGAACCATATTAACTGGAAATCTCAAGCTCAGAAAGAAATTTACTCGTCTAAGCTGGTTCGAGCGTTGAATCAAGTGAGGCTCAGTCCTTCGAATGAGGCGCCCCGCCGTGGTAGAGCCGTACGCGAGGCCGCCGACAGAATCCTTGCCGTCGCCGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATTCTAACGAATAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAAACAGAGAGCATCCACCGCTGGAAACAACCGCCCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAAAGGAAAAACGTTGCCGGCGGTGCAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCTGGTTGCCGGAAAGAACCTTGGCCGGTTATCCTAGAAGAGGCCACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCTATGACTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGTTGCAGGCTCTAGCTCCGCTCCTCCAAGCTGA

Coding sequence (CDS)

ATGGCTGAATGCAAAGAGTTTCGTCTTCGAAGGAATTTCCCCAAAAGATCGGATCGGTGCGTCTTGATGGCGTCATCTGTTCTTTCGAACTCCGATCGCATGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAACCACGGCAACAGAGACCGTCATCAAAACCAGAACCATATTAACTGGAAATCTCAAGCTCAGAAAGAAATTTACTCGTCTAAGCTGGTTCGAGCGTTGAATCAAGTGAGGCTCAGTCCTTCGAATGAGGCGCCCCGCCGTGGTAGAGCCGTACGCGAGGCCGCCGACAGAATCCTTGCCGTCGCCGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATTCTAACGAATAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAAACAGAGAGCATCCACCGCTGGAAACAACCGCCCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAAAGGAAAAACGTTGCCGGCGGTGCAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCTGGTTGCCGGAAAGAACCTTGGCCGGTTATCCTAGAAGAGGCCACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCTATGACTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGTTGCAGGCTCTAGCTCCGCTCCTCCAAGCTGA

Protein sequence

MAECKEFRLRRNFPKRSDRCVLMASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVRLSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMTALAELLSASTSVAGSSSAPPS
Homology
[Close]
BLAST of Carg18894 vs. NCBI nr
Match: XP_023514807.1 (transcription factor bHLH147-like [Cucurbita pepo subsp. pepo] >XP_023514808.1 transcription factor bHLH147-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.9 bits (803), Expect = 4.3e-82
Identity = 198/201 (98.51%), Postives = 199/201 (99.00%), Query Frame = 0 

Query: 23  MASSVLSNSDRMREXXXXXXXXXXXXXXXXXXXXXXINWKSQAQKEIYSSKLVRALNQVR 82
           MASSVLSNSDRMRE XXXXXXXXXXXXXXXXXXXXXINWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESXXXXXXXXXXXXXXXXXXXXXINWKSQAQKEIYSSKLVRALNQVR 60

Query: 83  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 142
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 120

Query: 143 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT 202
           PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEP PVILEEATDYIAALEMQVRAM+
Sbjct: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMS 180

Query: 203 ALAELLSASTSVAGSSSAPPS 224
           ALAELLSASTSVAGSSSAPPS
Sbjct: 181 ALAELLSASTSVAGSSSAPPS 201

[Close]
BLAST of Carg18894 vs. NCBI nr
Match: XP_022930482.1 (transcription factor bHLH147-like [Cucurbita moschata])

HSP 1 Score: 312.0 bits (798), Expect = 1.6e-81
Identity = 198/201 (98.51%), Postives = 198/201 (98.51%), Query Frame = 0 

Query: 23  MASSVLSNSDRMREXXXXXXXXXXXXXXXXXXXXXXINWKSQAQKEIYSSKLVRALNQVR 82
           MASSVLSNSDRMRE XXXXXXXXXXXXXXXXXXXXXINWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESXXXXXXXXXXXXXXXXXXXXXINWKSQAQKEIYSSKLVRALNQVR 60

Query: 83  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 142
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAG NR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINR 120

Query: 143 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT 202
           PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEP PVILEEATDYIAALEMQVRAMT
Sbjct: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMT 180

Query: 203 ALAELLSASTSVAGSSSAPPS 224
           ALAELLSASTSVAGSSSAPPS
Sbjct: 181 ALAELLSASTSVAGSSSAPPS 201

[Close]
BLAST of Carg18894 vs. NCBI nr
Match: XP_022999891.1 (transcription factor bHLH147-like [Cucurbita maxima])

HSP 1 Score: 307.4 bits (786), Expect = 4.0e-80
Identity = 191/200 (95.50%), Postives = 192/200 (96.00%), Query Frame = 0 

Query: 23  MASSVLSNSDRMREXXXXXXXXXXXXXXXXXXXXXXINWKSQAQKEIYSSKLVRALNQVR 82
           MASSVLSNSDRMRE  XXXXXXXXXXXXXXXXXX  INWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESSXXXXXXXXXXXXXXXXXXNLINWKSQAQKEIYSSKLVRALNQVR 60

Query: 83  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 142
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQR STAGNNR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRVSTAGNNR 120

Query: 143 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT 202
           PKKPRVSV RLKGKTLPAVQRKVRVLGRLVP CRKEP PVILEEATDYIAALEMQVRAM+
Sbjct: 121 PKKPRVSVFRLKGKTLPAVQRKVRVLGRLVPSCRKEPLPVILEEATDYIAALEMQVRAMS 180

Query: 203 ALAELLSASTSVAGSSSAPP 223
           ALAELLSASTSVAGSSSAPP
Sbjct: 181 ALAELLSASTSVAGSSSAPP 200

[Close]
BLAST of Carg18894 vs. NCBI nr
Match: XP_022959317.1 (transcription factor bHLH147-like [Cucurbita moschata] >XP_023548462.1 transcription factor bHLH147-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.5 bits (737), Expect = 1.9e-74
Identity = 186/202 (92.08%), Postives = 193/202 (95.54%), Query Frame = 0 

Query: 23  MASSVLSNSDRMREXXXXXXXXXXXXXXXXXXXXXXINWKSQAQKEIYSSKLVRALNQVR 82
           MASSV SNSDR REXXXXXXXXXXXXXXXXXXXXX I WKSQAQ+EIYSSKLVRALNQVR
Sbjct: 1   MASSVHSNSDRAREXXXXXXXXXXXXXXXXXXXXXHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 83  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQR-ASTAGNN 142
           LSP NEAPRRGRAVREAADR+LAVAAKGRTRWSRAILTNRLKLKFRKPK+QR ASTAGNN
Sbjct: 61  LSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNN 120

Query: 143 RPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAM 202
           R KKPRVSVLRL+GK+LPAVQRKVRVLGRLVPGCRKEP PVILEEATDYIAALEMQVRAM
Sbjct: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180

Query: 203 TALAELLSASTSVAGSSSAPPS 224
           +ALAELLSASTS AGSSSAPP+
Sbjct: 181 SALAELLSASTSAAGSSSAPPN 202

[Close]
BLAST of Carg18894 vs. NCBI nr
Match: XP_023006264.1 (transcription factor bHLH147-like [Cucurbita maxima])

HSP 1 Score: 284.6 bits (727), Expect = 2.8e-73
Identity = 184/202 (91.09%), Postives = 191/202 (94.55%), Query Frame = 0 

Query: 23  MASSVLSNSDRMREXXXXXXXXXXXXXXXXXXXXXXINWKSQAQKEIYSSKLVRALNQVR 82
           MASSV SNSDR REXXXXXXXXXXXXXXXXXXXXX I WKSQAQ+EIYSSKLVRALNQVR
Sbjct: 1   MASSVHSNSDRAREXXXXXXXXXXXXXXXXXXXXXHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 83  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQR-ASTAGNN 142
           LSP NE PRRGRAVREAADR+LAVAAKGRTRWSRAIL NRLKLKFRKPK+QR ASTAGNN
Sbjct: 61  LSPPNEGPRRGRAVREAADRVLAVAAKGRTRWSRAILKNRLKLKFRKPKRQRSASTAGNN 120

Query: 143 RPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAM 202
           R KKPRVSVLRL+GK+LPAVQRKVRVLGRLVPGCRKEP PVILEEATDYIAALEMQVRAM
Sbjct: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180

Query: 203 TALAELLSASTSVAGSSSAPPS 224
           +ALAELLSASTS AGSSSAPP+
Sbjct: 181 SALAELLSASTSAAGSSSAPPN 202

[Close]
BLAST of Carg18894 vs. TAIR10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors)

HSP 1 Score: 171.4 bits (433), Expect = 6.3e-43
Identity = 98/164 (59.76%), Postives = 122/164 (74.39%), Query Frame = 0 

Query: 61  WKSQAQKEIYSSKLVRALNQVRL------SPSNEAPRRGRAVREAADRILAVAAKGRTRW 120
           W+S+ Q++IYS+KLV AL ++R+      S S+  PR GRAVRE ADR LAVAA+G+T W
Sbjct: 50  WRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLW 109

Query: 121 SRAILTNRLKLKFRKPKKQRAS-------TAGNNRPKKPRVSVLRLKGKTLPAVQRKVRV 180
           SRAIL+  +KLKFRK K+QR S       T G+ R KK R +VLRLK K LPAVQRKV+V
Sbjct: 110 SRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKV 169

Query: 181 LGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMTALAELLSAS 212
           L RLVPGCRK+  PV+LEE TDYIAA+EMQ+R MTA+   +S+S
Sbjct: 170 LSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSSS 213

[Close]
BLAST of Carg18894 vs. TAIR10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-42
Identity = 106/178 (59.55%), Postives = 127/178 (71.35%), Query Frame = 0 

Query: 61  WKSQAQKEIYSSKLVRALNQVRL------SPSNEAPRRGRAVREAADRILAVAAKGRTRW 120
           W+S+ Q+ IYS+KL +AL QVRL      S S  A +RG+AVREAADR LAV+A+GRT W
Sbjct: 48  WRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLW 107

Query: 121 SRAILTNRLKLKFRKPKKQRASTA----------GNNRPKKPRVSVLRLKGKTLPAVQRK 180
           SRAIL NR+KLKFRK ++ RA+ A           +NR +K RVSVLRL  K++P V RK
Sbjct: 108 SRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRK 167

Query: 181 VRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMTALAELLSASTSVAGSSSAPP 223
           VRVLGRLVPGC K+  PVILEEATDYI ALEMQVRAM +L +LLS+        SAPP
Sbjct: 168 VRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSS------YGSAPP 219

[Close]
BLAST of Carg18894 vs. TAIR10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 134.4 bits (337), Expect = 8.5e-32
Identity = 82/159 (51.57%), Postives = 112/159 (70.44%), Query Frame = 0 

Query: 61  WKSQAQKEIYSSKLVRALNQVR----LSPSNEAPR----RGRAVREAADRILAVAAKGRT 120
           WK+   ++IY+ KLV AL +VR     + +NE  +      R +R+ ADR+LA +A+G T
Sbjct: 44  WKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTT 103

Query: 121 RWSRAILTNRLKLKFRKPKKQRASTAGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLV 180
           RWSRAIL +R++ K +K +K + ST GN + +K      R+K   LPAV+RK+++LGRLV
Sbjct: 104 RWSRAILASRVRAKLKKHRKAKKST-GNCKSRKGLTETNRIK---LPAVERKLKILGRLV 163

Query: 181 PGCRKEPWPVILEEATDYIAALEMQVRAMTALAELLSAS 212
           PGCRK   P +L+EATDYIAALEMQVRAM ALAELL+A+
Sbjct: 164 PGCRKVSVPNLLDEATDYIAALEMQVRAMEALAELLTAA 198

[Close]
BLAST of Carg18894 vs. TAIR10
Match: AT3G05800.1 (AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-19
Identity = 69/179 (38.55%), Postives = 94/179 (52.51%), Query Frame = 0 

Query: 64  QAQKEIYSSKLVRALNQVRLSPSNEAPRR----------------------------GRA 123
           Q  + +++ KL+ AL + R+S S EAP R                               
Sbjct: 30  QRGQRVFAPKLMEALRRSRVS-SEEAPVRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT 89

Query: 124 VREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNRPKKPRVSVLRLKG 183
           VR+ AD++LA  A+G TRWSRAIL +R     R+ +        N +P     + +R  G
Sbjct: 90  VRDTADKVLATTARGATRWSRAILVSRFGTSLRRRR--------NTKPASALAAAIRGSG 149

Query: 184 -----KTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMTALAELLS 210
                + L AV  +VRVLG LVPGCR+   P +L+E  DYIAALEMQVRAMTAL+++LS
Sbjct: 150 GSGRRRKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILS 199

[Close]
BLAST of Carg18894 vs. Swiss-Prot
Match: sp|Q9LSN7|BH147_ARATH (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-41
Identity = 98/164 (59.76%), Postives = 122/164 (74.39%), Query Frame = 0 

Query: 61  WKSQAQKEIYSSKLVRALNQVRL------SPSNEAPRRGRAVREAADRILAVAAKGRTRW 120
           W+S+ Q++IYS+KLV AL ++R+      S S+  PR GRAVRE ADR LAVAA+G+T W
Sbjct: 50  WRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLW 109

Query: 121 SRAILTNRLKLKFRKPKKQRAS-------TAGNNRPKKPRVSVLRLKGKTLPAVQRKVRV 180
           SRAIL+  +KLKFRK K+QR S       T G+ R KK R +VLRLK K LPAVQRKV+V
Sbjct: 110 SRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKV 169

Query: 181 LGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMTALAELLSAS 212
           L RLVPGCRK+  PV+LEE TDYIAA+EMQ+R MTA+   +S+S
Sbjct: 170 LSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSSS 213

[Close]
BLAST of Carg18894 vs. Swiss-Prot
Match: sp|Q9C8Z9|BH148_ARATH (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.9e-41
Identity = 106/178 (59.55%), Postives = 127/178 (71.35%), Query Frame = 0 

Query: 61  WKSQAQKEIYSSKLVRALNQVRL------SPSNEAPRRGRAVREAADRILAVAAKGRTRW 120
           W+S+ Q+ IYS+KL +AL QVRL      S S  A +RG+AVREAADR LAV+A+GRT W
Sbjct: 48  WRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLW 107

Query: 121 SRAILTNRLKLKFRKPKKQRASTA----------GNNRPKKPRVSVLRLKGKTLPAVQRK 180
           SRAIL NR+KLKFRK ++ RA+ A           +NR +K RVSVLRL  K++P V RK
Sbjct: 108 SRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRK 167

Query: 181 VRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMTALAELLSASTSVAGSSSAPP 223
           VRVLGRLVPGC K+  PVILEEATDYI ALEMQVRAM +L +LLS+        SAPP
Sbjct: 168 VRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSS------YGSAPP 219

[Close]
BLAST of Carg18894 vs. Swiss-Prot
Match: sp|O80482|BH149_ARATH (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.5e-30
Identity = 82/159 (51.57%), Postives = 112/159 (70.44%), Query Frame = 0 

Query: 61  WKSQAQKEIYSSKLVRALNQVR----LSPSNEAPR----RGRAVREAADRILAVAAKGRT 120
           WK+   ++IY+ KLV AL +VR     + +NE  +      R +R+ ADR+LA +A+G T
Sbjct: 44  WKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTT 103

Query: 121 RWSRAILTNRLKLKFRKPKKQRASTAGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLV 180
           RWSRAIL +R++ K +K +K + ST GN + +K      R+K   LPAV+RK+++LGRLV
Sbjct: 104 RWSRAILASRVRAKLKKHRKAKKST-GNCKSRKGLTETNRIK---LPAVERKLKILGRLV 163

Query: 181 PGCRKEPWPVILEEATDYIAALEMQVRAMTALAELLSAS 212
           PGCRK   P +L+EATDYIAALEMQVRAM ALAELL+A+
Sbjct: 164 PGCRKVSVPNLLDEATDYIAALEMQVRAMEALAELLTAA 198

[Close]
BLAST of Carg18894 vs. Swiss-Prot
Match: sp|Q9M9L6|BH150_ARATH (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.0e-18
Identity = 69/179 (38.55%), Postives = 94/179 (52.51%), Query Frame = 0 

Query: 64  QAQKEIYSSKLVRALNQVRLSPSNEAPRR----------------------------GRA 123
           Q  + +++ KL+ AL + R+S S EAP R                               
Sbjct: 30  QRGQRVFAPKLMEALRRSRVS-SEEAPVRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT 89

Query: 124 VREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNRPKKPRVSVLRLKG 183
           VR+ AD++LA  A+G TRWSRAIL +R     R+ +        N +P     + +R  G
Sbjct: 90  VRDTADKVLATTARGATRWSRAILVSRFGTSLRRRR--------NTKPASALAAAIRGSG 149

Query: 184 -----KTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMTALAELLS 210
                + L AV  +VRVLG LVPGCR+   P +L+E  DYIAALEMQVRAMTAL+++LS
Sbjct: 150 GSGRRRKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILS 199

[Close]
BLAST of Carg18894 vs. TrEMBL
Match: tr|A0A1S3C760|A0A1S3C760_CUCME (transcription factor bHLH147-like OS=Cucumis melo OX=3656 GN=LOC103497780 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 7.3e-70
Identity = 185/206 (89.81%), Postives = 195/206 (94.66%), Query Frame = 0 

Query: 23  MASSVLSNSDRMR--EXXXXXXXXXXXXXXXXXXXXXXINWKSQAQKEIYSSKLVRALNQ 82
           MASSVLSNSDR R   XXXXXXXXXXXXXXXXXXXXXXI WKSQAQ+EIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARXXXXXXXXXXXXXXXXXXXXXXXXXIKWKSQAQQEIYSSKLVRALNQ 60

Query: 83  VRLSPSNEA-PRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRK-PKKQRA-ST 142
           VRLSPSNEA PRRGRAVREAADR+LAVAAKGRTRWSRAILTNRLKLKFRK P++QR+ S+
Sbjct: 61  VRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPRRQRSTSS 120

Query: 143 AGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQ 202
           AGNNR KKPRVSVLRL+GK+LPAVQRKVRVLGRLVPGCRKEP PVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 203 VRAMTALAELLSASTSVAGSSSAPPS 224
           VRAM+ALAELLSASTS AGSSS+PPS
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]
BLAST of Carg18894 vs. TrEMBL
Match: tr|A0A0A0KCL4|A0A0A0KCL4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327940 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.2e-69
Identity = 185/206 (89.81%), Postives = 193/206 (93.69%), Query Frame = 0 

Query: 23  MASSVLSNSDRMR--EXXXXXXXXXXXXXXXXXXXXXXINWKSQAQKEIYSSKLVRALNQ 82
           MASSVLSNSDR R   XXXXXXXXXXXXXXXXXXXXXX  WKSQAQ+EIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARXXXXXXXXXXXXXXXXXXXXXXXXXXKWKSQAQQEIYSSKLVRALNQ 60

Query: 83  VRLSPSNEA-PRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRK-PKKQRA-ST 142
           VRL PSNEA PRRGRAVREAADR+LAVAAKGRTRWSRAILTNRLKLKFRK PK+QR+ ST
Sbjct: 61  VRLGPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPKRQRSTST 120

Query: 143 AGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQ 202
           AGNNR KKPRVSVLRL+GK+LPAVQRKVRVLGRLVPGCRKEP PVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 203 VRAMTALAELLSASTSVAGSSSAPPS 224
           VRAM+ALAELLSASTS AGSSS+PPS
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]
BLAST of Carg18894 vs. TrEMBL
Match: tr|A0A2R6PWM9|A0A2R6PWM9_ACTCH (Transcription factor bHLH147 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc24532 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.1e-53
Identity = 123/170 (72.35%), Postives = 142/170 (83.53%), Query Frame = 0 

Query: 61  WKSQAQKEIYSSKLVRALNQVRLSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILT 120
           WKS AQ+++YSSKL++AL QVR+  S+ APRR RAVREAADR+LAV AKG+TRWSRAILT
Sbjct: 47  WKSDAQQQVYSSKLLQALRQVRIGSSSTAPRRSRAVREAADRVLAVTAKGKTRWSRAILT 106

Query: 121 NRLKLKFRKPKKQR-ASTAGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEP 180
           +RLKLKF K K++  A++A + RPKKPRVS+LRLK K LPAVQRK RVLGRLVPGCRKEP
Sbjct: 107 SRLKLKFMKNKRRSPAASAASGRPKKPRVSILRLKSKNLPAVQRKARVLGRLVPGCRKEP 166

Query: 181 WPVILEEATDYIAALEMQVRAMTALAELLSASTSVA------GSSSAPPS 224
            PVILEEATDYIAALEMQVRAM+ALAELLS S S +      GS+  PPS
Sbjct: 167 LPVILEEATDYIAALEMQVRAMSALAELLSGSGSSSSTLTQLGSNRPPPS 216

[Close]
BLAST of Carg18894 vs. TrEMBL
Match: tr|A0A0D2VPG2|A0A0D2VPG2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G201700 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.4e-52
Identity = 122/167 (73.05%), Postives = 143/167 (85.63%), Query Frame = 0 

Query: 61  WKSQAQKEIYSSKLVRALNQVRL-SPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAIL 120
           WKS+AQ++IYSSKL++AL+QV L +PS+ APR GRAVREAADR LAVAAKGRTRWSRAIL
Sbjct: 37  WKSEAQQQIYSSKLLQALSQVSLNTPSSSAPRGGRAVREAADRALAVAAKGRTRWSRAIL 96

Query: 121 TNRLKLKFRKPKKQR----ASTAGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGC 180
           T+RLKLKFRK K+QR    A+  G++R KKPR SV +LK K+LPAVQRKV+VLGRLVPGC
Sbjct: 97  TSRLKLKFRKQKRQRGVAVAAVTGSSRWKKPRFSVSKLKSKSLPAVQRKVKVLGRLVPGC 156

Query: 181 RKEPWPVILEEATDYIAALEMQVRAMTALAELLSASTSVAGSSSAPP 223
           RK+P P+ILEEATDYIAALEMQVRAMT LAELLS S + +  S+ PP
Sbjct: 157 RKQPLPIILEEATDYIAALEMQVRAMTTLAELLSGSGAASSGSALPP 203

[Close]
BLAST of Carg18894 vs. TrEMBL
Match: tr|I1MGD6|I1MGD6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100792237 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 124/164 (75.61%), Postives = 138/164 (84.15%), Query Frame = 0 

Query: 61  WKSQAQKEIYSSKLVRALNQVRLSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILT 120
           WKS AQ+++YSSKL  AL +V +  S +APRRGRAVREAADR+LAVAAKGRTRWSRAILT
Sbjct: 41  WKSHAQQQLYSSKLHHALARVNI--SGDAPRRGRAVREAADRVLAVAAKGRTRWSRAILT 100

Query: 121 NRLKLKFRKP-KKQRASTAGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEP 180
           NRLKLKFRKP  K++    G  RPKK R SVLRLKGKTLPAVQRKVRVLGRLVPGCRKEP
Sbjct: 101 NRLKLKFRKPIHKRQKVVVGPGRPKKARFSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEP 160

Query: 181 WPVILEEATDYIAALEMQVRAMTALAELLSASTSVAGSSSAPPS 224
            PVILEEA DYI ALEMQVRAM ALA+LL  S+S + S++APPS
Sbjct: 161 LPVILEEAIDYIPALEMQVRAMQALADLLLGSSSASTSAAAPPS 202

The following BLAST results are available for this feature:
BLAST of Carg18894 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023514807.14.3e-8298.51transcription factor bHLH147-like [Cucurbita pepo subsp. pepo] >XP_023514808.1 t... [more]
XP_022930482.11.6e-8198.51transcription factor bHLH147-like [Cucurbita moschata][more]
XP_022999891.14.0e-8095.50transcription factor bHLH147-like [Cucurbita maxima][more]
XP_022959317.11.9e-7492.08transcription factor bHLH147-like [Cucurbita moschata] >XP_023548462.1 transcrip... [more]
XP_023006264.12.8e-7391.09transcription factor bHLH147-like [Cucurbita maxima][more]
BLAST of Carg18894 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G17100.16.3e-4359.76sequence-specific DNA binding transcription factors[more]
AT3G06590.11.1e-4259.55basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G09250.18.5e-3251.57basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G05800.11.7e-1938.55AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1[more]
BLAST of Carg18894 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LSN7|BH147_ARATH1.1e-4159.76Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=... [more]
sp|Q9C8Z9|BH148_ARATH1.9e-4159.55Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=... [more]
sp|O80482|BH149_ARATH1.5e-3051.57Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=... [more]
sp|Q9M9L6|BH150_ARATH3.0e-1838.55Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=... [more]
BLAST of Carg18894 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C760|A0A1S3C760_CUCME7.3e-7089.81transcription factor bHLH147-like OS=Cucumis melo OX=3656 GN=LOC103497780 PE=4 S... [more]
tr|A0A0A0KCL4|A0A0A0KCL4_CUCSA1.2e-6989.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327940 PE=4 SV=1[more]
tr|A0A2R6PWM9|A0A2R6PWM9_ACTCH8.1e-5372.35Transcription factor bHLH147 like OS=Actinidia chinensis var. chinensis OX=15908... [more]
tr|A0A0D2VPG2|A0A0D2VPG2_GOSRA1.4e-5273.05Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G201700 PE=4 ... [more]
tr|I1MGD6|I1MGD6_SOYBN1.8e-5275.61Uncharacterized protein OS=Glycine max OX=3847 GN=100792237 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR036638HLH_DNA-bd_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18894-RACarg18894-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..64
NoneNo IPR availablePANTHERPTHR33124:SF33TRANSCRIPTION FACTOR BHLH148coord: 27..222
NoneNo IPR availablePANTHERPTHR33124FAMILY NOT NAMEDcoord: 27..222
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILYSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 164..211

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg18894Cla021804Watermelon (97103) v1carwmB0700
Carg18894Cla009236Watermelon (97103) v1carwmB0701
Carg18894Csa3G168390Cucumber (Chinese Long) v2carcuB0723
Carg18894Csa6G327940Cucumber (Chinese Long) v2carcuB0726
Carg18894MELO3C006722Melon (DHL92) v3.5.1carmeB0701
Carg18894MELO3C021260Melon (DHL92) v3.5.1carmeB0700
Carg18894ClCG06G004500Watermelon (Charleston Gray)carwcgB0681
Carg18894CSPI06G17730Wild cucumber (PI 183967)carcpiB0741
Carg18894CSPI03G15070Wild cucumber (PI 183967)carcpiB0738
Carg18894Cucsa.247060Cucumber (Gy14) v1carcgyB0787
Carg18894Cucsa.252470Cucumber (Gy14) v1carcgyB0788
Carg18894CmaCh06G015690Cucurbita maxima (Rimu)carcmaB0987
Carg18894CmaCh08G012850Cucurbita maxima (Rimu)carcmaB0988
Carg18894CmaCh14G015830Cucurbita maxima (Rimu)carcmaB0984
Carg18894CmaCh17G003760Cucurbita maxima (Rimu)carcmaB0985
Carg18894CmoCh17G003650Cucurbita moschata (Rifu)carcmoB0958
Carg18894CmoCh14G016150Cucurbita moschata (Rifu)carcmoB0957
Carg18894CmoCh08G012510Cucurbita moschata (Rifu)carcmoB0960
Carg18894Lsi09G015030Bottle gourd (USVL1VR-Ls)carlsiB641
Carg18894Cp4.1LG08g05360Cucurbita pepo (Zucchini)carcpeB0987
Carg18894Cp4.1LG12g03270Cucurbita pepo (Zucchini)carcpeB0984
Carg18894Cp4.1LG03g11920Cucurbita pepo (Zucchini)carcpeB0986
Carg18894Cp4.1LG17g00290Cucurbita pepo (Zucchini)carcpeB0985
Carg18894CsGy3G015210Cucumber (Gy14) v2carcgybB0700
Carg18894CsGy6G017340Cucumber (Gy14) v2carcgybB0702
Carg18894MELO3C006722.2Melon (DHL92) v3.6.1carmedB0714
Carg18894MELO3C021260.2Melon (DHL92) v3.6.1carmedB0713
Carg18894CsaV3_6G028530Cucumber (Chinese Long) v3carcucB0744
Carg18894CsaV3_3G015270Cucumber (Chinese Long) v3carcucB0741
Carg18894Cla97C05G088250Watermelon (97103) v2carwmbB0734
Carg18894Cla97C06G113920Watermelon (97103) v2carwmbB0735
Carg18894Bhi12G001737Wax gourdcarwgoB0826
Carg18894Bhi01G000789Wax gourdcarwgoB0828
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg18894Carg05555Silver-seed gourdcarcarB085
Carg18894Carg19614Silver-seed gourdcarcarB316
The following block(s) are covering this gene:
GeneOrganismBlock
Carg18894Watermelon (97103) v2carwmbB0733
Carg18894Watermelon (Charleston Gray)carwcgB0680