Carg19614 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19614
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	transcription factor bHLH147-like
Location	Cucurbita_argyrosperma_scaffold_117 : 237942 .. 238574 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGTCTATGATTCTAAATCCTGTGGCGAGTTCTGAGCGATCGCGTGATTCGTCCAGAAAGAAGAAGAAGAAGAAAGCGGCGAGGGAAAATGATCGTCAAGGTCAGGATCACATCCAGTGGAAATCACAAGCTCAGCATCAAGTTTACTCCTCGAAGCTGTTGCGCGCCTTGAGTCAGGTCAGGATCAGTTCTTCCGAGTCGGCACCAAACGAGACTCCGCGCCGCGGCCGAGCTGTGCGGGAGGCGTCTGATACAGTTCTGGCCATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTGACGAACCGTCTCAAGCTCAAGTTTCGAAAGCACAACCGGCAGAAGGCTCATGCGACTGGAAACAGCCGAACGAAGAAGCCGCGAGTTAGCGTTTTCCGGTTGAGAGGGAAGGGATTACCAACTTTACAGAGTAAAGCTCGGCTTCTCGGCCGGCTGGTTCCCGGCTGCAGAAAGCAACCGCTGCCGGTGATTCTGGATGAAGTAACCGATTACATACCCGCTCTGGAAATGCAGATCCGAGTCATGAGCGCCATAGTCAACTTGGTTTCAAGCTCTTCTTCTTCTCCTGGTATGGATTCTTCCATCTCCCCACCTACCTGA

mRNA sequence

ATGGCGTCGTCTATGATTCTAAATCCTGTGGCGAGTTCTGAGCGATCGCGTGATTCGTCCAGAAAGAAGAAGAAGAAGAAAGCGGCGAGGGAAAATGATCGTCAAGGTCAGGATCACATCCAGTGGAAATCACAAGCTCAGCATCAAGTTTACTCCTCGAAGCTGTTGCGCGCCTTGAGTCAGGTCAGGATCAGTTCTTCCGAGTCGGCACCAAACGAGACTCCGCGCCGCGGCCGAGCTGTGCGGGAGGCGTCTGATACAGTTCTGGCCATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTGACGAACCGTCTCAAGCTCAAGTTTCGAAAGCACAACCGGCAGAAGGCTCATGCGACTGGAAACAGCCGAACGAAGAAGCCGCGAGTTAGCGTTTTCCGGTTGAGAGGGAAGGGATTACCAACTTTACAGAGTAAAGCTCGGCTTCTCGGCCGGCTGGTTCCCGGCTGCAGAAAGCAACCGCTGCCGGTGATTCTGGATGAAGTAACCGATTACATACCCGCTCTGGAAATGCAGATCCGAGTCATGAGCGCCATAGTCAACTTGGTTTCAAGCTCTTCTTCTTCTCCTGGTATGGATTCTTCCATCTCCCCACCTACCTGA

Coding sequence (CDS)

ATGGCGTCGTCTATGATTCTAAATCCTGTGGCGAGTTCTGAGCGATCGCGTGATTCGTCCAGAAAGAAGAAGAAGAAGAAAGCGGCGAGGGAAAATGATCGTCAAGGTCAGGATCACATCCAGTGGAAATCACAAGCTCAGCATCAAGTTTACTCCTCGAAGCTGTTGCGCGCCTTGAGTCAGGTCAGGATCAGTTCTTCCGAGTCGGCACCAAACGAGACTCCGCGCCGCGGCCGAGCTGTGCGGGAGGCGTCTGATACAGTTCTGGCCATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTGACGAACCGTCTCAAGCTCAAGTTTCGAAAGCACAACCGGCAGAAGGCTCATGCGACTGGAAACAGCCGAACGAAGAAGCCGCGAGTTAGCGTTTTCCGGTTGAGAGGGAAGGGATTACCAACTTTACAGAGTAAAGCTCGGCTTCTCGGCCGGCTGGTTCCCGGCTGCAGAAAGCAACCGCTGCCGGTGATTCTGGATGAAGTAACCGATTACATACCCGCTCTGGAAATGCAGATCCGAGTCATGAGCGCCATAGTCAACTTGGTTTCAAGCTCTTCTTCTTCTCCTGGTATGGATTCTTCCATCTCCCCACCTACCTGA

Protein sequence

MASSMILNPVASSERSRDSSRKKKKKKAARENDRQGQDHIQWKSQAQHQVYSSKLLRALSQVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKAHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSSPGMDSSISPPT

Homology

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BLAST of Carg19614 vs. NCBI nr
Match: XP_022979929.1 (transcription factor bHLH147-like [Cucurbita maxima])

HSP 1 Score: 330.9 bits (847), Expect = 3.2e-87
Identity = 203/212 (95.75%), Postives = 204/212 (96.23%), Query Frame = 0


Query: 1   MASSMILNPVASSE-XXXXXXXXXXXXXXXXXNDRQGQDHIQWKSQAQHQVYSSKLLRAL 60
           MASSMILNPVASSE XXXXXXXXXXXXXXXX NDRQGQDHIQWKSQAQHQVYSSKLLRAL
Sbjct: 1   MASSMILNPVASSEXXXXXXXXXXXXXXXXXENDRQGQDHIQWKSQAQHQVYSSKLLRAL 60

Query: 61  SQVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQK 120
           SQVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQK
Sbjct: 61  SQVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQK 120

Query: 121 AHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPAL 180
           AHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPAL
Sbjct: 121 AHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPAL 180

Query: 181 EMQIRVMSAIVNLVSS-SSSSPGMDSSISPPT 211
           EMQIRVMSAIVNLVSS      GMDSSISPP+
Sbjct: 181 EMQIRVMSAIVNLVSSXXXXXXGMDSSISPPS 212

[Close]

BLAST of Carg19614 vs. NCBI nr
Match: XP_023529070.1 (transcription factor bHLH147-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 322.8 bits (826), Expect = 8.7e-85
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MASSMILNPVASSEXXXXXXXXXXXXXXXXXNDRQGQDHIQWKSQAQHQVYSSKLLRALS 60
           MASSMILNPVASSEXXXXXXXXXXXXXXXXXNDRQGQDHIQWKSQAQHQVYSSKLLRALS
Sbjct: 1   MASSMILNPVASSEXXXXXXXXXXXXXXXXXNDRQGQDHIQWKSQAQHQVYSSKLLRALS 60

Query: 61  QVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKA 120
           QVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKA
Sbjct: 61  QVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKA 120

Query: 121 HATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALE 180
           HATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALE
Sbjct: 121 HATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALE 180

Query: 181 MQIRVMSAIVNL 193
           MQIRVMSAIVNL
Sbjct: 181 MQIRVMSAIVNL 192

[Close]

BLAST of Carg19614 vs. NCBI nr
Match: XP_022955464.1 (transcription factor bHLH148-like [Cucurbita moschata])

HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MASSMILNPVASSEXXXXXXXXXXXXXXXXXNDRQGQDHIQWKSQAQHQVYSSKLLRALS 60
           MASSMILNPVASSEXXXXXXXXXXXXXXXXXNDRQGQDHIQWKSQAQHQVYSSKLLRALS
Sbjct: 1   MASSMILNPVASSEXXXXXXXXXXXXXXXXXNDRQGQDHIQWKSQAQHQVYSSKLLRALS 60

Query: 61  QVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKA 120
           QVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKA
Sbjct: 61  QVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKA 120

Query: 121 HATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALE 180
           HATGNSRTKKPRVSVFRLRGKGLPT+QSKARLLGRLVPGCRKQPLPVILDEVTDYIPALE
Sbjct: 121 HATGNSRTKKPRVSVFRLRGKGLPTIQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALE 180

Query: 181 MQIRVMSAIVNL 193
           MQIRVMSAIVNL
Sbjct: 181 MQIRVMSAIVNL 192

[Close]

BLAST of Carg19614 vs. NCBI nr
Match: XP_022938342.1 (transcription factor bHLH147-like [Cucurbita moschata] >XP_022938343.1 transcription factor bHLH147-like [Cucurbita moschata])

HSP 1 Score: 300.4 bits (768), Expect = 4.6e-78
Identity = 183/212 (86.32%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 1   MASSMILNPVASSEXXXXXXXXXXXXXXXXXNDRQGQDHIQWKSQAQHQVYSSKLLRALS 60
           MASS+ LNPVASSE XXXXXXXXXXXXXXXX  RQ QDH++WKSQAQHQ+YSSKLLRALS
Sbjct: 1   MASSLFLNPVASSERXXXXXXXXXXXXXXXXXXRQDQDHLKWKSQAQHQIYSSKLLRALS 60

Query: 61  QVRISS--SESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQ 120
           QVRIS   S SAPNE PRRG+AVREA+DTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQ
Sbjct: 61  QVRISPPYSPSAPNEMPRRGQAVREAADTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQ 120

Query: 121 KAHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPA 180
           KA  +G+SRTKKPRVSV RL+GKGLPT+Q K RLLGRLVPGCRKQPLPVILDE TDYIPA
Sbjct: 121 KARVSGSSRTKKPRVSVLRLKGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEATDYIPA 180

Query: 181 LEMQIRVMSAIVNLVSSSSSSPGMDSSISPPT 211
           LEMQIRVMSAI NLVSSSSSSPGMDSSIS P+
Sbjct: 181 LEMQIRVMSAIFNLVSSSSSSPGMDSSISQPS 212

[Close]

BLAST of Carg19614 vs. NCBI nr
Match: XP_023540934.1 (transcription factor bHLH147-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296.6 bits (758), Expect = 6.7e-77
Identity = 181/212 (85.38%), Postives = 193/212 (91.04%), Query Frame = 0


Query: 1   MASSMILNPVASSEXXXXXXXXXXXXXXXXXNDRQGQDHIQWKSQAQHQVYSSKLLRALS 60
           MASS+ LNPVASSE XXXXXXXXXXXXXXXX     QDH++WKSQAQHQ+YSSKLLRALS
Sbjct: 1   MASSLFLNPVASSERXXXXXXXXXXXXXXXXXXXXXQDHLKWKSQAQHQIYSSKLLRALS 60

Query: 61  QVRISS--SESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQ 120
           QVRISS  S SAPNE PRRG+AVREA+DTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQ
Sbjct: 61  QVRISSPYSPSAPNEMPRRGQAVREAADTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQ 120

Query: 121 KAHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPA 180
           KA  +G+SRTKKPRVSV RL+GKGLPT+Q K RLLGRLVPGCRKQPLPVILDE TDYIPA
Sbjct: 121 KARVSGSSRTKKPRVSVLRLKGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEATDYIPA 180

Query: 181 LEMQIRVMSAIVNLVSSSSSSPGMDSSISPPT 211
           L+MQIRVMSAI NLVSSSSSSPGMDSSIS P+
Sbjct: 181 LDMQIRVMSAIFNLVSSSSSSPGMDSSISQPS 212

[Close]

BLAST of Carg19614 vs. TAIR10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors)

HSP 1 Score: 164.9 bits (416), Expect = 5.5e-41
Identity = 90/165 (54.55%), Postives = 121/165 (73.33%), Query Frame = 0


Query: 41  QWKSQAQHQVYSSKLLRALSQVRISS--SESAPNETPRRGRAVREASDTVLAMTAKGRSR 100
           +W+S+ Q Q+YS+KL+ AL ++RIS   S S+ +  PR GRAVRE +D  LA+ A+G++ 
Sbjct: 49  KWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTL 108

Query: 101 WSRAILTNRLKLKFRKHNRQKAH-------ATGNSRTKKPRVSVFRLRGKGLPTLQSKAR 160
           WSRAIL+  +KLKFRKH RQ+          TG+ R+KK R +V RL+ KGLP +Q K +
Sbjct: 109 WSRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVK 168

Query: 161 LLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSS 197
           +L RLVPGCRKQ LPV+L+E TDYI A+EMQIR M+AI++ VSSS
Sbjct: 169 VLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSSS 213

[Close]

BLAST of Carg19614 vs. TAIR10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 162.5 bits (410), Expect = 2.7e-40
Identity = 90/177 (50.85%), Postives = 127/177 (71.75%), Query Frame = 0


Query: 36  GQDHIQWKSQAQHQVYSSKLLRALSQVRISSSESAPNE--TPRRGRAVREASDTVLAMTA 95
           G+ H +W+S+ Q ++YS+KL +AL QVR++SS S  +     +RG+AVREA+D  LA++A
Sbjct: 42  GEIHARWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSA 101

Query: 96  KGRSRWSRAILTNRLKLKFRKHNRQKAH----------ATGNSRTKKPRVSVFRLRGKGL 155
           +GR+ WSRAIL NR+KLKFRK  R +A           ++ ++R++K RVSV RL  K +
Sbjct: 102 RGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSI 161

Query: 156 PTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSSP 201
           P +  K R+LGRLVPGC KQ +PVIL+E TDYI ALEMQ+R M+++V L+SS  S+P
Sbjct: 162 PDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAP 218

[Close]

BLAST of Carg19614 vs. TAIR10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 125.2 bits (313), Expect = 4.9e-29
Identity = 70/161 (43.48%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 41  QWKSQAQHQVYSSKLLRALSQVRISSSESAPNETPR----RGRAVREASDTVLAMTAKGR 100
           +WK+    Q+Y+ KL+ AL +VR  SS ++ NET +      R +R+ +D VLA +A+G 
Sbjct: 43  RWKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGT 102

Query: 101 SRWSRAILTNRLKLKFRKHNRQKAHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRL 160
           +RWSRAIL +R++ K +KH + K  +TGN +++K      R++   LP ++ K ++LGRL
Sbjct: 103 TRWSRAILASRVRAKLKKHRKAK-KSTGNCKSRKGLTETNRIK---LPAVERKLKILGRL 162

Query: 161 VPGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSS 198
           VPGCRK  +P +LDE TDYI ALEMQ+R M A+  L+++++
Sbjct: 163 VPGCRKVSVPNLLDEATDYIAALEMQVRAMEALAELLTAAA 199

[Close]

BLAST of Carg19614 vs. TAIR10
Match: AT3G05800.1 (AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-15
Identity = 61/185 (32.97%), Postives = 91/185 (49.19%), Query Frame = 0


Query: 45  QAQHQVYSSKLLRALSQVRISSSESAPNE-----------------------TPRRGRAV 104
           Q   +V++ KL+ AL + R+SS E+                                  V
Sbjct: 30  QRGQRVFAPKLMEALRRSRVSSEEAPVRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTV 89

Query: 105 REASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKAHATGNSRTKKPRVSVFRLRGK 164
           R+ +D VLA TA+G +RWSRAIL +R     R+    K     ++     R S    R +
Sbjct: 90  RDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTK---PASALAAAIRGSGGSGRRR 149

Query: 165 GLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSSPG 207
            L  + ++ R+LG LVPGCR+  LP +LDE  DYI ALEMQ+R M+A+  ++S    S  
Sbjct: 150 KLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQPSTN 209

[Close]

BLAST of Carg19614 vs. TAIR10
Match: AT2G43060.1 (ILI1 binding bHLH 1)

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 42/149 (28.19%), Postives = 71/149 (47.65%), Query Frame = 0


Query: 47  QHQVYSSKLLRALSQVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSR-WSRAILT 106
           +  V++   L++LS +R  +    P++   R R +++A+   +A  A G SR WSRA+L 
Sbjct: 14  EKDVFAFHFLQSLSNLRKQNPFDTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALL- 73

Query: 107 NRLKLKFRKHNRQKAHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPL 166
                  R+ ++        SR K    S  R   +  P ++  A  L  LVPG      
Sbjct: 74  -------RRADKDDNKIVRFSRRKWKISSKRRRSNQRAPVVEEAAERLRNLVPGGGGMET 133

Query: 167 PVILDEVTDYIPALEMQIRVMSAIVNLVS 195
             +++E   YI  L MQ++VM  +V+ +S
Sbjct: 134 SKLMEETAHYIKCLSMQVKVMQCLVDGLS 154

[Close]

BLAST of Carg19614 vs. Swiss-Prot
Match: sp|Q9LSN7|BH147_ARATH (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.0e-39
Identity = 90/165 (54.55%), Postives = 121/165 (73.33%), Query Frame = 0


Query: 41  QWKSQAQHQVYSSKLLRALSQVRISS--SESAPNETPRRGRAVREASDTVLAMTAKGRSR 100
           +W+S+ Q Q+YS+KL+ AL ++RIS   S S+ +  PR GRAVRE +D  LA+ A+G++ 
Sbjct: 49  KWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTL 108

Query: 101 WSRAILTNRLKLKFRKHNRQKAH-------ATGNSRTKKPRVSVFRLRGKGLPTLQSKAR 160
           WSRAIL+  +KLKFRKH RQ+          TG+ R+KK R +V RL+ KGLP +Q K +
Sbjct: 109 WSRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVK 168

Query: 161 LLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSS 197
           +L RLVPGCRKQ LPV+L+E TDYI A+EMQIR M+AI++ VSSS
Sbjct: 169 VLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAILSAVSSS 213

[Close]

BLAST of Carg19614 vs. Swiss-Prot
Match: sp|Q9C8Z9|BH148_ARATH (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.9e-39
Identity = 90/177 (50.85%), Postives = 127/177 (71.75%), Query Frame = 0


Query: 36  GQDHIQWKSQAQHQVYSSKLLRALSQVRISSSESAPNE--TPRRGRAVREASDTVLAMTA 95
           G+ H +W+S+ Q ++YS+KL +AL QVR++SS S  +     +RG+AVREA+D  LA++A
Sbjct: 42  GEIHARWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSA 101

Query: 96  KGRSRWSRAILTNRLKLKFRKHNRQKAH----------ATGNSRTKKPRVSVFRLRGKGL 155
           +GR+ WSRAIL NR+KLKFRK  R +A           ++ ++R++K RVSV RL  K +
Sbjct: 102 RGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSI 161

Query: 156 PTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSSP 201
           P +  K R+LGRLVPGC KQ +PVIL+E TDYI ALEMQ+R M+++V L+SS  S+P
Sbjct: 162 PDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAP 218

[Close]

BLAST of Carg19614 vs. Swiss-Prot
Match: sp|O80482|BH149_ARATH (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.8e-28
Identity = 70/161 (43.48%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 41  QWKSQAQHQVYSSKLLRALSQVRISSSESAPNETPR----RGRAVREASDTVLAMTAKGR 100
           +WK+    Q+Y+ KL+ AL +VR  SS ++ NET +      R +R+ +D VLA +A+G 
Sbjct: 43  RWKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGT 102

Query: 101 SRWSRAILTNRLKLKFRKHNRQKAHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRL 160
           +RWSRAIL +R++ K +KH + K  +TGN +++K      R++   LP ++ K ++LGRL
Sbjct: 103 TRWSRAILASRVRAKLKKHRKAK-KSTGNCKSRKGLTETNRIK---LPAVERKLKILGRL 162

Query: 161 VPGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSS 198
           VPGCRK  +P +LDE TDYI ALEMQ+R M A+  L+++++
Sbjct: 163 VPGCRKVSVPNLLDEATDYIAALEMQVRAMEALAELLTAAA 199

[Close]

BLAST of Carg19614 vs. Swiss-Prot
Match: sp|Q9M9L6|BH150_ARATH (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.5e-14
Identity = 61/185 (32.97%), Postives = 91/185 (49.19%), Query Frame = 0


Query: 45  QAQHQVYSSKLLRALSQVRISSSESAPNE-----------------------TPRRGRAV 104
           Q   +V++ KL+ AL + R+SS E+                                  V
Sbjct: 30  QRGQRVFAPKLMEALRRSRVSSEEAPVRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTV 89

Query: 105 REASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKAHATGNSRTKKPRVSVFRLRGK 164
           R+ +D VLA TA+G +RWSRAIL +R     R+    K     ++     R S    R +
Sbjct: 90  RDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTK---PASALAAAIRGSGGSGRRR 149

Query: 165 GLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSSPG 207
            L  + ++ R+LG LVPGCR+  LP +LDE  DYI ALEMQ+R M+A+  ++S    S  
Sbjct: 150 KLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQPSTN 209

[Close]

BLAST of Carg19614 vs. Swiss-Prot
Match: sp|Q9SKX1|IBH1_ARATH (Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.0e-04
Identity = 42/149 (28.19%), Postives = 71/149 (47.65%), Query Frame = 0


Query: 47  QHQVYSSKLLRALSQVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSR-WSRAILT 106
           +  V++   L++LS +R  +    P++   R R +++A+   +A  A G SR WSRA+L 
Sbjct: 14  EKDVFAFHFLQSLSNLRKQNPFDTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALL- 73

Query: 107 NRLKLKFRKHNRQKAHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPL 166
                  R+ ++        SR K    S  R   +  P ++  A  L  LVPG      
Sbjct: 74  -------RRADKDDNKIVRFSRRKWKISSKRRRSNQRAPVVEEAAERLRNLVPGGGGMET 133

Query: 167 PVILDEVTDYIPALEMQIRVMSAIVNLVS 195
             +++E   YI  L MQ++VM  +V+ +S
Sbjct: 134 SKLMEETAHYIKCLSMQVKVMQCLVDGLS 154

[Close]

BLAST of Carg19614 vs. TrEMBL
Match: tr|A0A0A0L965|A0A0A0L965_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168390 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 9.3e-75
Identity = 181/209 (86.60%), Postives = 186/209 (89.00%), Query Frame = 0


Query: 1   MASSMILNPVASSEXXXXXXXXXXXXXXXXXNDRQGQDHIQWKSQAQHQVYSSKLLRALS 60
           MASS+ILNPV SSE XXXXXXXXXXXXXXXX        I+WKSQAQHQVYSSKLLRALS
Sbjct: 1   MASSLILNPVTSSERXXXXXXXXXXXXXXXXXXXXXXXXIKWKSQAQHQVYSSKLLRALS 60

Query: 61  QVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKA 120
           QVRISS E  PNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHN+QKA
Sbjct: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120

Query: 121 HATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALE 180
              GNSRTKKP VSV RLRGKGLPT+Q K RLLGRLVPGCRKQPLPVILDEVTDYIPALE
Sbjct: 121 RVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180

Query: 181 MQIRVMSAIVNLV-SSSSSSPGMDSSISP 209
           MQIRVMSAIVNLV SSSSSS G+DSSI P
Sbjct: 181 MQIRVMSAIVNLVSSSSSSSTGIDSSIPP 209

[Close]

BLAST of Carg19614 vs. TrEMBL
Match: tr|A0A1S3AY92|A0A1S3AY92_CUCME (transcription factor bHLH147-like OS=Cucumis melo OX=3656 GN=LOC103483901 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 5.1e-73
Identity = 178/209 (85.17%), Postives = 183/209 (87.56%), Query Frame = 0


Query: 1   MASSMILNPVASSEXXXXXXXXXXXXXXXXXNDRQGQDHIQWKSQAQHQVYSSKLLRALS 60
           MASS+ILNPV SSE XXXXXXXXXXXXXXXX        I+WKSQAQHQVYSSKLLRALS
Sbjct: 1   MASSLILNPVTSSERXXXXXXXXXXXXXXXXXXXXXXXXIKWKSQAQHQVYSSKLLRALS 60

Query: 61  QVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKA 120
           QVRISS E  PNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHN+QKA
Sbjct: 61  QVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKA 120

Query: 121 HATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALE 180
              GNSRTKKP VSV RLRGKGLPT+Q K RLLGRLVPGCRKQPLPVILDEVTDYIPALE
Sbjct: 121 RVMGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALE 180

Query: 181 MQIRVMSAIVNLVSS-SSSSPGMDSSISP 209
           MQIRVMSAIVNLVSS      G+DSSISP
Sbjct: 181 MQIRVMSAIVNLVSSXXXXXXGIDSSISP 209

[Close]

BLAST of Carg19614 vs. TrEMBL
Match: tr|A0A1S3C760|A0A1S3C760_CUCME (transcription factor bHLH147-like OS=Cucumis melo OX=3656 GN=LOC103497780 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.2e-51
Identity = 118/173 (68.21%), Postives = 143/173 (82.66%), Query Frame = 0


Query: 40  IQWKSQAQHQVYSSKLLRALSQVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRW 99
           I+WKSQAQ ++YSSKL+RAL+QVR+S S  AP   PRRGRAVREA+D VLA+ AKGR+RW
Sbjct: 39  IKWKSQAQQEIYSSKLVRALNQVRLSPSNEAP---PRRGRAVREAADRVLAVAAKGRTRW 98

Query: 100 SRAILTNRLKLKFRKHNRQK--AHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLV 159
           SRAILTNRLKLKFRK  R++    + GN+R+KKPRVSV RLRGK LP +Q K R+LGRLV
Sbjct: 99  SRAILTNRLKLKFRKAPRRQRSTSSAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLV 158

Query: 160 PGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSSPGMDSSISPPT 211
           PGCRK+PLPVIL+E TDYI ALEMQ+R MSA+  L+S+S+S+ G  SS SPP+
Sbjct: 159 PGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSAAG--SSSSPPS 206

[Close]

BLAST of Carg19614 vs. TrEMBL
Match: tr|A0A0A0KCL4|A0A0A0KCL4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327940 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.7e-50
Identity = 118/172 (68.60%), Postives = 143/172 (83.14%), Query Frame = 0


Query: 41  QWKSQAQHQVYSSKLLRALSQVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWS 100
           +WKSQAQ ++YSSKL+RAL+QVR+  S  AP   PRRGRAVREA+D VLA+ AKGR+RWS
Sbjct: 40  KWKSQAQQEIYSSKLVRALNQVRLGPSNEAP---PRRGRAVREAADRVLAVAAKGRTRWS 99

Query: 101 RAILTNRLKLKFRK-HNRQKAHAT-GNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVP 160
           RAILTNRLKLKFRK   RQ++ +T GN+R+KKPRVSV RLRGK LP +Q K R+LGRLVP
Sbjct: 100 RAILTNRLKLKFRKAPKRQRSTSTAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVP 159

Query: 161 GCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSSPGMDSSISPPT 211
           GCRK+PLPVIL+E TDYI ALEMQ+R MSA+  L+S+S+S+ G  SS SPP+
Sbjct: 160 GCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSAAG--SSSSPPS 206

[Close]

BLAST of Carg19614 vs. TrEMBL
Match: tr|A0A2J6LEH6|A0A2J6LEH6_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_1X41680 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.3e-48
Identity = 112/172 (65.12%), Postives = 138/172 (80.23%), Query Frame = 0


Query: 42  WKSQAQHQVYSSKLLRALSQVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSR 101
           WKS+AQ QVYSSKLL+AL  VRI+S  S P+  PRRGRAVREA+D VLA+TAKGRSRWSR
Sbjct: 53  WKSEAQQQVYSSKLLQALRNVRINSGTSPPS-APRRGRAVREAADRVLAVTAKGRSRWSR 112

Query: 102 AILTNRLKLKFRKHNRQK----AHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLV 161
           AILTN++KLKF K+NR++      ATGNSR KKPRVS+ +L+ K LP +Q K R+LGRLV
Sbjct: 113 AILTNKIKLKFMKNNRRQRGTAVTATGNSRLKKPRVSILKLKTKNLPAVQRKTRVLGRLV 172

Query: 162 PGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLV---SSSSSSPGMDSSI 207
           PGCRKQPLPV+L+E TDYI ALEMQ++ M+A+ +L+   SSS+S PG  + I
Sbjct: 173 PGCRKQPLPVVLEEATDYIAALEMQVKAMAALADLLSGGSSSTSGPGTGAMI 223

The following BLAST results are available for this feature:

BLAST of Carg19614 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022979929.1	3.2e-87	95.75	transcription factor bHLH147-like [Cucurbita maxima]	[more]
XP_023529070.1	8.7e-85	100.00	transcription factor bHLH147-like [Cucurbita pepo subsp. pepo]	[more]
XP_022955464.1	1.5e-84	99.48	transcription factor bHLH148-like [Cucurbita moschata]	[more]
XP_022938342.1	4.6e-78	86.32	transcription factor bHLH147-like [Cucurbita moschata] >XP_022938343.1 transcrip...	[more]
XP_023540934.1	6.7e-77	85.38	transcription factor bHLH147-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg19614 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17100.1	5.5e-41	54.55	sequence-specific DNA binding transcription factors	[more]
AT3G06590.1	2.7e-40	50.85	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G09250.1	4.9e-29	43.48	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G05800.1	1.4e-15	32.97	AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1	[more]
AT2G43060.1	1.7e-05	28.19	ILI1 binding bHLH 1	[more]

BLAST of Carg19614 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LSN7\|BH147_ARATH	1.0e-39	54.55	Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=...	[more]
sp\|Q9C8Z9\|BH148_ARATH	4.9e-39	50.85	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]
sp\|O80482\|BH149_ARATH	8.8e-28	43.48	Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=...	[more]
sp\|Q9M9L6\|BH150_ARATH	2.5e-14	32.97	Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=...	[more]
sp\|Q9SKX1\|IBH1_ARATH	3.0e-04	28.19	Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1	[more]

BLAST of Carg19614 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L965\|A0A0A0L965_CUCSA	9.3e-75	86.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168390 PE=4 SV=1	[more]
tr\|A0A1S3AY92\|A0A1S3AY92_CUCME	5.1e-73	85.17	transcription factor bHLH147-like OS=Cucumis melo OX=3656 GN=LOC103483901 PE=4 S...	[more]
tr\|A0A1S3C760\|A0A1S3C760_CUCME	4.2e-51	68.21	transcription factor bHLH147-like OS=Cucumis melo OX=3656 GN=LOC103497780 PE=4 S...	[more]
tr\|A0A0A0KCL4\|A0A0A0KCL4_CUCSA	2.7e-50	68.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327940 PE=4 SV=1	[more]
tr\|A0A2J6LEH6\|A0A2J6LEH6_LACSA	4.3e-48	65.12	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_1X41680 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19614-RA	Carg19614-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..85
None	No IPR available	PANTHER	PTHR33124	FAMILY NOT NAMED	coord: 9..204
None	No IPR available	PANTHER	PTHR33124:SF33	TRANSCRIPTION FACTOR BHLH148	coord: 9..204

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19614	Cla021804	Watermelon (97103) v1	carwmB0269
Carg19614	Cla009236	Watermelon (97103) v1	carwmB0270
Carg19614	Csa3G168390	Cucumber (Chinese Long) v2	carcuB0306
Carg19614	MELO3C006722	Melon (DHL92) v3.5.1	carmeB0280
Carg19614	MELO3C021260	Melon (DHL92) v3.5.1	carmeB0279
Carg19614	ClCG06G004500	Watermelon (Charleston Gray)	carwcgB0272
Carg19614	CSPI03G15070	Wild cucumber (PI 183967)	carcpiB0310
Carg19614	Cucsa.252470	Cucumber (Gy14) v1	carcgyB0329
Carg19614	CmaCh08G012850	Cucurbita maxima (Rimu)	carcmaB0394
Carg19614	CmaCh14G015830	Cucurbita maxima (Rimu)	carcmaB0391
Carg19614	CmaCh17G003760	Cucurbita maxima (Rimu)	carcmaB0392
Carg19614	CmaCh06G015690	Cucurbita maxima (Rimu)	carcmaB0393
Carg19614	CmoCh14G016150	Cucurbita moschata (Rifu)	carcmoB0388
Carg19614	CmoCh17G003650	Cucurbita moschata (Rifu)	carcmoB0389
Carg19614	CmoCh08G012510	Cucurbita moschata (Rifu)	carcmoB0391
Carg19614	Lsi09G015030	Bottle gourd (USVL1VR-Ls)	carlsiB252
Carg19614	Lsi05G014130	Bottle gourd (USVL1VR-Ls)	carlsiB253
Carg19614	Cp4.1LG03g11920	Cucurbita pepo (Zucchini)	carcpeB0395
Carg19614	Cp4.1LG17g00290	Cucurbita pepo (Zucchini)	carcpeB0394
Carg19614	Cp4.1LG12g03270	Cucurbita pepo (Zucchini)	carcpeB0393
Carg19614	Cp4.1LG08g05360	Cucurbita pepo (Zucchini)	carcpeB0396
Carg19614	CsGy3G015210	Cucumber (Gy14) v2	carcgybB0294
Carg19614	MELO3C006722.2	Melon (DHL92) v3.6.1	carmedB0292
Carg19614	MELO3C021260.2	Melon (DHL92) v3.6.1	carmedB0291
Carg19614	CsaV3_3G015270	Cucumber (Chinese Long) v3	carcucB0309
Carg19614	Cla97C05G088250	Watermelon (97103) v2	carwmbB0287
Carg19614	Cla97C06G113920	Watermelon (97103) v2	carwmbB0288
Carg19614	Bhi12G001737	Wax gourd	carwgoB0364
Carg19614	Bhi01G000789	Wax gourd	carwgoB0365

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19614	Carg05555	Silver-seed gourd	carcarB079
Carg19614	Carg18894	Silver-seed gourd	carcarB316
Carg19614	Carg25642	Silver-seed gourd	carcarB317

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19614	Cucurbita moschata (Rifu)	carcmoB0390
Carg19614	Watermelon (Charleston Gray)	carwcgB0271