Cp4.1LG11g07170 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACGAAGACTTGGTAACAGTTGAGTACCATTGCCGTATCATAATCTGTCAGAAAAAACAAACAAAACAAAACAATATTCAAATCAAAAACCCAAACCCCCCGCATAAGGATTCACCCAATTTCTCATTCTCCTTCCACTTCTTATGGCCACCGAAACAGATCCCACGAAGCACTCCAACGGAAGCCTTTGTGGCAGAGGACACTGGAGGCCCGCCGAGGACACCAAGCTTAAGGAACTCGTCGCCCTTCATGGCCCTCACAACTGGAACCTCATCGCCCACAAGCTCCAAGGCAGATCTGGTACACACTTTACTCCCCTTTTCAACAATGGGTTTTGAAGATTTTGGTAATTCACTCTGTTTTGGCAGGGAAGAGTTGCAGATTGAGATGGCTAAACCAACTGGACCCCAGGATTAACCGAACGGCCTTCACGGAACAGGAAGAGGAGAGGTTAATGCAGGCACATGGAATTTACGGCAACAAATGGGCTGTGATTTCTAGGCTTTTTCCTGGAAGAACTGATAATGGTGTGAAGAATCACTGGCATGTTATAATGGCTAGAAAGTGTAGACAACAACACATCGCTTCTTACACGAGGAGGAACCGATTCTCTCAACCGCCGCCGCCGCCCTCCTCCGGTGGTGGTTTGGAAGGGGGTGAACCGGCGTTCATCGACTTTCTTGGAGTAGGAGGCAGATGATTGAAGGCGTTTAGGAAGGCAAGGAAGAGCAGAGTTGGTGAGAAGATGGGCGTGGTCCAATATTTGGGTTGGGCTGTTGGAGTGGTGAAAAGATCCGCAGTCAGTGGGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGGCATTGAAAGCTACGTATAATCCCAACGCCCAAACCCATCATTTTCTTCTACCCTTTCTTTTTGCTCCATATTCAATGTCACCTTACTTTTCATCACTGCTTCATTGGGATTCATGTTCATTATTAATAATAGGAATGAAAAAA CACGAAGACTTGGTAACAGTTGAGTACCATTGCCGTATCATAATCTGTCAGAAAAAACAAACAAAACAAAACAATATTCAAATCAAAAACCCAAACCCCCCGCATAAGGATTCACCCAATTTCTCATTCTCCTTCCACTTCTTATGGCCACCGAAACAGATCCCACGAAGCACTCCAACGGAAGCCTTTGTGGCAGAGGACACTGGAGGCCCGCCGAGGACACCAAGCTTAAGGAACTCGTCGCCCTTCATGGCCCTCACAACTGGAACCTCATCGCCCACAAGCTCCAAGGCAGATCTGGGAAGAGTTGCAGATTGAGATGGCTAAACCAACTGGACCCCAGGATTAACCGAACGGCCTTCACGGAACAGGAAGAGGAGAGGTTAATGCAGGCACATGGAATTTACGGCAACAAATGGGCTGTGATTTCTAGGCTTTTTCCTGGAAGAACTGATAATGGTGTGAAGAATCACTGGCATGTTATAATGGCTAGAAAGTGTAGACAACAACACATCGCTTCTTACACGAGGAGGAACCGATTCTCTCAACCGCCGCCGCCGCCCTCCTCCGGTGGTGGTTTGGAAGGGGGTGAACCGGCGTTCATCGACTTTCTTGGAGTAGGAGGCAGATGATTGAAGGCGTTTAGGAAGGCAAGGAAGAGCAGAGTTGGTGAGAAGATGGGCGTGGTCCAATATTTGGGTTGGGCTGTTGGAGTGGTGAAAAGATCCGCAGTCAGTGGGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGGCATTGAAAGCTACGTATAATCCCAACGCCCAAACCCATCATTTTCTTCTACCCTTTCTTTTTGCTCCATATTCAATGTCACCTTACTTTTCATCACTGCTTCATTGGGATTCATGTTCATTATTAATAATAGGAATGAAAAAA ATGGCCACCGAAACAGATCCCACGAAGCACTCCAACGGAAGCCTTTGTGGCAGAGGACACTGGAGGCCCGCCGAGGACACCAAGCTTAAGGAACTCGTCGCCCTTCATGGCCCTCACAACTGGAACCTCATCGCCCACAAGCTCCAAGGCAGATCTGGGAAGAGTTGCAGATTGAGATGGCTAAACCAACTGGACCCCAGGATTAACCGAACGGCCTTCACGGAACAGGAAGAGGAGAGGTTAATGCAGGCACATGGAATTTACGGCAACAAATGGGCTGTGATTTCTAGGCTTTTTCCTGGAAGAACTGATAATGGTGTGAAGAATCACTGGCATGTTATAATGGCTAGAAAGTGTAGACAACAACACATCGCTTCTTACACGAGGAGGAACCGATTCTCTCAACCGCCGCCGCCGCCCTCCTCCGGTGGTGGTTTGGAAGGGGGTGAACCGGCGTTCATCGACTTTCTTGGAGTAGGAGGCAGATGA MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRRNRFSQPPPPPSSGGGLEGGEPAFIDFLGVGGR
BLAST of Cp4.1LG11g07170 vs. Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.4e-30 Identity = 54/102 (52.94%), Postives = 72/102 (70.59%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. Swiss-Prot
Match: MYBAA_DICDI (Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.9e-27 Identity = 62/135 (45.93%), Postives = 80/135 (59.26%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. Swiss-Prot
Match: MYB_BOVIN (Transcriptional activator Myb OS=Bos taurus GN=MYB PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 7.3e-27 Identity = 51/105 (48.57%), Postives = 72/105 (68.57%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. Swiss-Prot
Match: MYB_CHICK (Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 7.3e-27 Identity = 51/105 (48.57%), Postives = 72/105 (68.57%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. Swiss-Prot
Match: MYB_HUMAN (Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2) HSP 1 Score: 121.7 bits (304), Expect = 7.3e-27 Identity = 51/105 (48.57%), Postives = 72/105 (68.57%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. TrEMBL
Match: A0A0A0LHV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G100550 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 3.8e-54 Identity = 102/143 (71.33%), Postives = 113/143 (79.02%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. TrEMBL
Match: K7K7M3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G108800 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 2.4e-53 Identity = 100/125 (80.00%), Postives = 109/125 (87.20%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. TrEMBL
Match: V7CP20_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G170500g PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.2e-52 Identity = 102/137 (74.45%), Postives = 114/137 (83.21%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. TrEMBL
Match: A0A0B2PSW8_GLYSO (Transcription factor MYB44 OS=Glycine soja GN=glysoja_031543 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.2e-52 Identity = 99/125 (79.20%), Postives = 109/125 (87.20%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. TrEMBL
Match: D9ZJ60_MALDO (MYB domain class transcription factor OS=Malus domestica GN=MYB32 PE=2 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 1.6e-52 Identity = 106/170 (62.35%), Postives = 120/170 (70.59%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. TAIR10
Match: AT1G26780.2 (AT1G26780.2 myb domain protein 117) HSP 1 Score: 211.1 bits (536), Expect = 5.2e-55 Identity = 97/130 (74.62%), Postives = 109/130 (83.85%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. TAIR10
Match: AT1G69560.1 (AT1G69560.1 myb domain protein 105) HSP 1 Score: 210.3 bits (534), Expect = 8.9e-55 Identity = 97/121 (80.17%), Postives = 107/121 (88.43%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. TAIR10
Match: AT1G73410.1 (AT1G73410.1 myb domain protein 54) HSP 1 Score: 190.3 bits (482), Expect = 9.5e-49 Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. TAIR10
Match: AT5G17800.1 (AT5G17800.1 myb domain protein 56) HSP 1 Score: 189.9 bits (481), Expect = 1.2e-48 Identity = 89/127 (70.08%), Postives = 100/127 (78.74%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. TAIR10
Match: AT1G17950.1 (AT1G17950.1 myb domain protein 52) HSP 1 Score: 186.8 bits (473), Expect = 1.0e-47 Identity = 80/108 (74.07%), Postives = 92/108 (85.19%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. NCBI nr
Match: gi|449442435|ref|XP_004138987.1| (PREDICTED: transcription factor MYB44 [Cucumis sativus]) HSP 1 Score: 219.2 bits (557), Expect = 5.4e-54 Identity = 102/143 (71.33%), Postives = 113/143 (79.02%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. NCBI nr
Match: gi|659082191|ref|XP_008441713.1| (PREDICTED: transcription factor MYB44 [Cucumis melo]) HSP 1 Score: 217.6 bits (553), Expect = 1.6e-53 Identity = 97/122 (79.51%), Postives = 107/122 (87.70%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. NCBI nr
Match: gi|356502553|ref|XP_003520083.1| (PREDICTED: transcription factor MYB108-like [Glycine max]) HSP 1 Score: 216.5 bits (550), Expect = 3.5e-53 Identity = 100/125 (80.00%), Postives = 109/125 (87.20%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. NCBI nr
Match: gi|743799495|ref|XP_011013264.1| (PREDICTED: uncharacterized protein LOC105117338 [Populus euphratica]) HSP 1 Score: 214.5 bits (545), Expect = 1.3e-52 Identity = 100/128 (78.12%), Postives = 108/128 (84.38%), Query Frame = 1
BLAST of Cp4.1LG11g07170 vs. NCBI nr
Match: gi|593791216|ref|XP_007158647.1| (hypothetical protein PHAVU_002G170500g [Phaseolus vulgaris]) HSP 1 Score: 214.2 bits (544), Expect = 1.7e-52 Identity = 102/137 (74.45%), Postives = 114/137 (83.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|