Carg25811 (gene) Silver-seed gourd

Overview
NameCarg25811
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionMYB transcription factor
LocationCucurbita_argyrosperma_scaffold_332 : 8554 .. 9211 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACCGAAACAGATCCCACGAAGCACTCCAATGGAAGCCTTTGTGGCAGAGGACACTGGAGGCCCGCCGAGGACACCAAGCTTAAGGAACTCGTCGCCCTTCATGGCCCTCACAACTGGAACCTCATAGCCCACAAACTCCAAGGCAGATCTGGTACACACTTTACTCTCCTTTTCAACAATGGGTTTTGAAGATTTTGGTAATTCACTCTGTTTTGGCAGGGAAGAGTTGCAGATTGAGATGGCTAAACCAGCTGGACCCCAGGATTAACCGAACGGCCTTCACGGAACAGGAAGAGGAGAGGTTAATGCAGGCACATGGAATTTACGGCAACAAATGGGCTATGATTTCTAGGCTTTTTCCTGGAAGAACTGACAATGGTGTGAAGAATCACTGGCATGTTATAATGGCTAGAAAGTGTAGACAACAACACATCGCTTCTTACACGAGGAGGAGCCGATTCTCTCAACCGCCACCGCCTCCGCCGTCGCCGCCGCCCTCCTCCGGTGGAGGTTTGGAAGGGGGTGAACCGGCGTTCATCGACTTTCTTGGAGTAGGAGGCAGATGATTGAAGGCGTTTAGGAAGGCAAGGAAGAGCAGAGTTGGTGAGATTATGGGCGTGGTCCAATGTTTGGGTTGGGCTGTTGGAGTGGT

mRNA sequence

ATGGCCACCGAAACAGATCCCACGAAGCACTCCAATGGAAGCCTTTGTGGCAGAGGACACTGGAGGCCCGCCGAGGACACCAAGCTTAAGGAACTCGTCGCCCTTCATGGCCCTCACAACTGGAACCTCATAGCCCACAAACTCCAAGGCAGATCTGGGAAGAGTTGCAGATTGAGATGGCTAAACCAGCTGGACCCCAGGATTAACCGAACGGCCTTCACGGAACAGGAAGAGGAGAGGTTAATGCAGGCACATGGAATTTACGGCAACAAATGGGCTATGATTTCTAGGCTTTTTCCTGGAAGAACTGACAATGGTGTGAAGAATCACTGGCATGTTATAATGGCTAGAAAGTGTAGACAACAACACATCGCTTCTTACACGAGGAGGAGCCGATTCTCTCAACCGCCACCGCCTCCGCCGTCGCCGCCGCCCTCCTCCGGTGGAGGTTTGGAAGGGGGTGAACCGGCGTTCATCGACTTTCTTGGAGTAGGAGGCAGATGATTGAAGGCGTTTAGGAAGGCAAGGAAGAGCAGAGTTGGTGAGATTATGGGCGTGGTCCAATGTTTGGGTTGGGCTGTTGGAGTGGT

Coding sequence (CDS)

ATGGCCACCGAAACAGATCCCACGAAGCACTCCAATGGAAGCCTTTGTGGCAGAGGACACTGGAGGCCCGCCGAGGACACCAAGCTTAAGGAACTCGTCGCCCTTCATGGCCCTCACAACTGGAACCTCATAGCCCACAAACTCCAAGGCAGATCTGGGAAGAGTTGCAGATTGAGATGGCTAAACCAGCTGGACCCCAGGATTAACCGAACGGCCTTCACGGAACAGGAAGAGGAGAGGTTAATGCAGGCACATGGAATTTACGGCAACAAATGGGCTATGATTTCTAGGCTTTTTCCTGGAAGAACTGACAATGGTGTGAAGAATCACTGGCATGTTATAATGGCTAGAAAGTGTAGACAACAACACATCGCTTCTTACACGAGGAGGAGCCGATTCTCTCAACCGCCACCGCCTCCGCCGTCGCCGCCGCCCTCCTCCGGTGGAGGTTTGGAAGGGGGTGAACCGGCGTTCATCGACTTTCTTGGAGTAGGAGGCAGATGA

Protein sequence

MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRRSRFSQPPPPPPSPPPSSGGGLEGGEPAFIDFLGVGGR
Homology
[Close]
BLAST of Carg25811 vs. NCBI nr
Match: XP_023547176.1 (transcription factor MYB105-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.7 bits (792), Expect = 6.1e-81
Identity = 160/167 (95.81%), Postives = 162/167 (97.01%), Query Frame = 0 

Query: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60
           MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW
Sbjct: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60

Query: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCR 120
           LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWA+ISRLFPGRTDNGVKNHWHVIMARKCR
Sbjct: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCR 120

Query: 121 QQHIASYTRRSRFSXXXXXXXXXXXXXXXXXEGGEPAFIDFLGVGGR 168
           QQHIASYTRR+RF     XXXXXXXXXXXXXEGGEPAFIDFLGVGGR
Sbjct: 121 QQHIASYTRRNRF-----XXXXXXXXXXXXXEGGEPAFIDFLGVGGR 162

[Close]
BLAST of Carg25811 vs. NCBI nr
Match: XP_022972861.1 (transcription factor MYB105-like [Cucurbita maxima])

HSP 1 Score: 306.6 bits (784), Expect = 5.2e-80
Identity = 161/167 (96.41%), Postives = 163/167 (97.60%), Query Frame = 0 

Query: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60
           MATETDPTKHSN SLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW
Sbjct: 1   MATETDPTKHSNVSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60

Query: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCR 120
           LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCR
Sbjct: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCR 120

Query: 121 QQHIASYTRRSRFSXXXXXXXXXXXXXXXXXEGGEPAFIDFLGVGGR 168
           QQH+ASYTRR+   XXXXXXXXXXXXXXXXXEGGEPAFIDFLGVGGR
Sbjct: 121 QQHVASYTRRNXXXXXXXXXXXXXXXXXXXXEGGEPAFIDFLGVGGR 167

[Close]
BLAST of Carg25811 vs. NCBI nr
Match: XP_022946906.1 (transcription factor CSA-like [Cucurbita moschata])

HSP 1 Score: 305.8 bits (782), Expect = 8.8e-80
Identity = 164/174 (94.25%), Postives = 165/174 (94.83%), Query Frame = 0 

Query: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60
           MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW
Sbjct: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60

Query: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCR 120
           LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCR
Sbjct: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCR 120

Query: 121 QQHIASYTRRSR-------FSXXXXXXXXXXXXXXXXXEGGEPAFIDFLGVGGR 168
           QQHIASYTRR+R         XXXXXXXXXXXXXXXXXEGGEPAFIDFLGVGGR
Sbjct: 121 QQHIASYTRRNRXXXXXXXXXXXXXXXXXXXXXXXXXXEGGEPAFIDFLGVGGR 174

[Close]
BLAST of Carg25811 vs. NCBI nr
Match: XP_004138987.1 (PREDICTED: transcription factor MYB44 [Cucumis sativus] >KGN61373.1 hypothetical protein Csa_2G100550 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 1.7e-54
Identity = 100/122 (81.97%), Postives = 108/122 (88.52%), Query Frame = 0 

Query: 11  SNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINR 70
           S   +CGRGHWRPAEDTKLKELV L+GP NWNLIA KL+GRSGKSCRLRW NQLDPRINR
Sbjct: 4   SKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINR 63

Query: 71  TAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRR 130
            AFTE+EEERLMQAH +YGNKWAMI+RLFPGRTDNGVKNHWHV+MAR CR QH +SY R 
Sbjct: 64  KAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCR-QHFSSYRRS 123

Query: 131 SR 133
           SR
Sbjct: 124 SR 124

[Close]
BLAST of Carg25811 vs. NCBI nr
Match: XP_008441713.1 (PREDICTED: transcription factor MYB44 isoform X1 [Cucumis melo])

HSP 1 Score: 219.5 bits (558), Expect = 8.3e-54
Identity = 99/122 (81.15%), Postives = 107/122 (87.70%), Query Frame = 0 

Query: 11  SNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINR 70
           S   +CGRGHWRP EDTKLKELV L+GP NWNLIA KL+GRSGKSCRLRW NQLDPRINR
Sbjct: 4   SKSKVCGRGHWRPPEDTKLKELVGLYGPQNWNLIAQKLEGRSGKSCRLRWFNQLDPRINR 63

Query: 71  TAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRR 130
            AF+E+EEERLMQAH IYGNKWAMI+RLFPGRTDNGVKNHWHV+MAR CR QH +SY R 
Sbjct: 64  KAFSEEEEERLMQAHEIYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCR-QHFSSYRRS 123

Query: 131 SR 133
           SR
Sbjct: 124 SR 124

[Close]
BLAST of Carg25811 vs. TAIR10
Match: AT1G69560.1 (myb domain protein 105)

HSP 1 Score: 211.5 bits (537), Expect = 4.1e-55
Identity = 98/121 (80.99%), Postives = 107/121 (88.43%), Query Frame = 0 

Query: 10  HSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRIN 69
           HS+ +   RGHWRPAEDTKLKELVA++GP NWNLIA KLQGRSGKSCRLRW NQLDPRIN
Sbjct: 99  HSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRIN 158

Query: 70  RTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTR 129
           R AFTE+EEERLMQAH +YGNKWAMI+RLFPGRTDN VKNHWHVIMARK R+Q  +SY R
Sbjct: 159 RRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQS-SSYRR 218

Query: 130 R 131
           R
Sbjct: 219 R 218

[Close]
BLAST of Carg25811 vs. TAIR10
Match: AT1G26780.2 (myb domain protein 117)

HSP 1 Score: 209.9 bits (533), Expect = 1.2e-54
Identity = 96/124 (77.42%), Postives = 107/124 (86.29%), Query Frame = 0 

Query: 11  SNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINR 70
           S  S+ GRGHWRPAED KLKELV+++GP NWNLIA KLQGRSGKSCRLRW NQLDPRINR
Sbjct: 91  SKPSVLGRGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINR 150

Query: 71  TAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRR 130
            AFTE+EEERLMQAH +YGNKWAMI+RLFPGRTDN VKNHWHV+MARK R +H ++Y RR
Sbjct: 151 RAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYR-EHSSAYRRR 210

Query: 131 SRFS 135
              S
Sbjct: 211 KLMS 213

[Close]
BLAST of Carg25811 vs. TAIR10
Match: AT1G73410.1 (myb domain protein 54)

HSP 1 Score: 189.1 bits (479), Expect = 2.2e-48
Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 0 

Query: 15  LCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINRTAFT 74
           +C RGHWRPAED KLK+LV  +GPHNWN IA KL GRSGKSCRLRW NQLDPRINR  FT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 75  EQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQ 122
           E+EEERL+ AH I+GN+W++I+RLFPGRTDN VKNHWHVIMAR+ RQ
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ 109

[Close]
BLAST of Carg25811 vs. TAIR10
Match: AT5G17800.1 (myb domain protein 56)

HSP 1 Score: 187.6 bits (475), Expect = 6.3e-48
Identity = 83/110 (75.45%), Postives = 92/110 (83.64%), Query Frame = 0 

Query: 12  NGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINRT 71
           N  +C RGHWRP ED KLKELVA  GP NWNLI++ L GRSGKSCRLRW NQLDPRIN+ 
Sbjct: 87  NTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKR 146

Query: 72  AFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQ 122
           AFTE+EE RL+ AH  YGNKWA+ISRLFPGRTDN VKNHWHVIMAR+ R+
Sbjct: 147 AFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE 196

[Close]
BLAST of Carg25811 vs. TAIR10
Match: AT1G17950.1 (myb domain protein 52)

HSP 1 Score: 185.3 bits (469), Expect = 3.1e-47
Identity = 79/108 (73.15%), Postives = 92/108 (85.19%), Query Frame = 0 

Query: 15  LCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINRTAFT 74
           +C RGHWRPAED KL+ELV   GPHNWN IA KL GRSGKSCRLRW NQLDPRINR  FT
Sbjct: 2   MCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFT 61

Query: 75  EQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQ 123
           E+EEERL+ +H I+GN+W++I+R FPGRTDN VKNHWHVIMAR+ R++
Sbjct: 62  EEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRER 109

[Close]
BLAST of Carg25811 vs. Swiss-Prot
Match: sp|Q9SEZ4|MY105_ARATH (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 7.4e-54
Identity = 98/121 (80.99%), Postives = 107/121 (88.43%), Query Frame = 0 

Query: 10  HSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRIN 69
           HS+ +   RGHWRPAEDTKLKELVA++GP NWNLIA KLQGRSGKSCRLRW NQLDPRIN
Sbjct: 99  HSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRIN 158

Query: 70  RTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTR 129
           R AFTE+EEERLMQAH +YGNKWAMI+RLFPGRTDN VKNHWHVIMARK R+Q  +SY R
Sbjct: 159 RRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQS-SSYRR 218

Query: 130 R 131
           R
Sbjct: 219 R 218

[Close]
BLAST of Carg25811 vs. Swiss-Prot
Match: sp|Q9LQX5|MY117_ARATH (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.1e-53
Identity = 96/124 (77.42%), Postives = 107/124 (86.29%), Query Frame = 0 

Query: 11  SNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINR 70
           S  S+ GRGHWRPAED KLKELV+++GP NWNLIA KLQGRSGKSCRLRW NQLDPRINR
Sbjct: 91  SKPSVLGRGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINR 150

Query: 71  TAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRR 130
            AFTE+EEERLMQAH +YGNKWAMI+RLFPGRTDN VKNHWHV+MARK R +H ++Y RR
Sbjct: 151 RAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYR-EHSSAYRRR 210

Query: 131 SRFS 135
              S
Sbjct: 211 KLMS 213

[Close]
BLAST of Carg25811 vs. Swiss-Prot
Match: sp|Q5NBM8|CSA_ORYSJ (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 2.9e-50
Identity = 88/110 (80.00%), Postives = 96/110 (87.27%), Query Frame = 0 

Query: 13  GSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINRTA 72
           G LC RGHWRPAED KLK+LVA +GP NWNLIA KL GRSGKSCRLRW NQLDPRINR A
Sbjct: 44  GKLCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRRA 103

Query: 73  FTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQ 123
           FTE+EEERLM AH  YGNKWA+I+RLFPGRTDN VKNHWHV+MAR+ R+Q
Sbjct: 104 FTEEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHREQ 153

[Close]
BLAST of Carg25811 vs. Swiss-Prot
Match: sp|Q9FX36|MYB54_ARATH (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.9e-47
Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 0 

Query: 15  LCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINRTAFT 74
           +C RGHWRPAED KLK+LV  +GPHNWN IA KL GRSGKSCRLRW NQLDPRINR  FT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 75  EQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQ 122
           E+EEERL+ AH I+GN+W++I+RLFPGRTDN VKNHWHVIMAR+ RQ
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ 109

[Close]
BLAST of Carg25811 vs. Swiss-Prot
Match: sp|Q6R053|MYB56_ARATH (Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-46
Identity = 83/110 (75.45%), Postives = 92/110 (83.64%), Query Frame = 0 

Query: 12  NGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINRT 71
           N  +C RGHWRP ED KLKELVA  GP NWNLI++ L GRSGKSCRLRW NQLDPRIN+ 
Sbjct: 87  NTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKR 146

Query: 72  AFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQ 122
           AFTE+EE RL+ AH  YGNKWA+ISRLFPGRTDN VKNHWHVIMAR+ R+
Sbjct: 147 AFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE 196

[Close]
BLAST of Carg25811 vs. TrEMBL
Match: tr|A0A0A0LHV6|A0A0A0LHV6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G100550 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-54
Identity = 100/122 (81.97%), Postives = 108/122 (88.52%), Query Frame = 0 

Query: 11  SNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINR 70
           S   +CGRGHWRPAEDTKLKELV L+GP NWNLIA KL+GRSGKSCRLRW NQLDPRINR
Sbjct: 4   SKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINR 63

Query: 71  TAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRR 130
            AFTE+EEERLMQAH +YGNKWAMI+RLFPGRTDNGVKNHWHV+MAR CR QH +SY R 
Sbjct: 64  KAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCR-QHFSSYRRS 123

Query: 131 SR 133
           SR
Sbjct: 124 SR 124

[Close]
BLAST of Carg25811 vs. TrEMBL
Match: tr|A0A1S3B420|A0A1S3B420_CUCME (transcription factor MYB44 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485791 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.5e-54
Identity = 99/122 (81.15%), Postives = 107/122 (87.70%), Query Frame = 0 

Query: 11  SNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINR 70
           S   +CGRGHWRP EDTKLKELV L+GP NWNLIA KL+GRSGKSCRLRW NQLDPRINR
Sbjct: 4   SKSKVCGRGHWRPPEDTKLKELVGLYGPQNWNLIAQKLEGRSGKSCRLRWFNQLDPRINR 63

Query: 71  TAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRR 130
            AF+E+EEERLMQAH IYGNKWAMI+RLFPGRTDNGVKNHWHV+MAR CR QH +SY R 
Sbjct: 64  KAFSEEEEERLMQAHEIYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCR-QHFSSYRRS 123

Query: 131 SR 133
           SR
Sbjct: 124 SR 124

[Close]
BLAST of Carg25811 vs. TrEMBL
Match: tr|A0A1S4DU28|A0A1S4DU28_CUCME (transcription factor MYB44 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485791 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.5e-54
Identity = 99/122 (81.15%), Postives = 107/122 (87.70%), Query Frame = 0 

Query: 11  SNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINR 70
           S   +CGRGHWRP EDTKLKELV L+GP NWNLIA KL+GRSGKSCRLRW NQLDPRINR
Sbjct: 4   SKSKVCGRGHWRPPEDTKLKELVGLYGPQNWNLIAQKLEGRSGKSCRLRWFNQLDPRINR 63

Query: 71  TAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRR 130
            AF+E+EEERLMQAH IYGNKWAMI+RLFPGRTDNGVKNHWHV+MAR CR QH +SY R 
Sbjct: 64  KAFSEEEEERLMQAHEIYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCR-QHFSSYRRS 123

Query: 131 SR 133
           SR
Sbjct: 124 SR 124

[Close]
BLAST of Carg25811 vs. TrEMBL
Match: tr|A0A067LAW8|A0A067LAW8_JATCU (MYB family protein OS=Jatropha curcas OX=180498 GN=JCGZ_15621 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.3e-52
Identity = 102/127 (80.31%), Postives = 109/127 (85.83%), Query Frame = 0 

Query: 4   ETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQ 63
           ETD +  S   LC RGHWRPAEDTKLKELVAL+GP NWNLIA KL+GRSGKSCRLRW NQ
Sbjct: 112 ETDSSGQS--KLCARGHWRPAEDTKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQ 171

Query: 64  LDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQH 123
           LDPRINR AFTE+EEERLMQAH +YGNKWAMI+RLFPGRTDN VKNHWHVIMARK R+Q 
Sbjct: 172 LDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQS 231

Query: 124 IASYTRR 131
            A Y RR
Sbjct: 232 TA-YRRR 235

[Close]
BLAST of Carg25811 vs. TrEMBL
Match: tr|A0A1R3JEH5|A0A1R3JEH5_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_06579 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.9e-52
Identity = 101/127 (79.53%), Postives = 110/127 (86.61%), Query Frame = 0 

Query: 4   ETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQ 63
           ETD +  S   LC RGHWRPAEDTKLKELVAL+GP NWNLIA KL+GRSGKSCRLRW NQ
Sbjct: 120 ETDSSGQS--KLCARGHWRPAEDTKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQ 179

Query: 64  LDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQH 123
           LDPRINR AFTE+EEERL+QAH +YGNKWAMI+RLFPGRTDN VKNH+HVIMARKCR+Q 
Sbjct: 180 LDPRINRRAFTEEEEERLIQAHHLYGNKWAMIARLFPGRTDNAVKNHYHVIMARKCREQS 239

Query: 124 IASYTRR 131
            A Y RR
Sbjct: 240 TA-YRRR 243

The following BLAST results are available for this feature:
BLAST of Carg25811 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023547176.16.1e-8195.81transcription factor MYB105-like [Cucurbita pepo subsp. pepo][more]
XP_022972861.15.2e-8096.41transcription factor MYB105-like [Cucurbita maxima][more]
XP_022946906.18.8e-8094.25transcription factor CSA-like [Cucurbita moschata][more]
XP_004138987.11.7e-5481.97PREDICTED: transcription factor MYB44 [Cucumis sativus] >KGN61373.1 hypothetical... [more]
XP_008441713.18.3e-5481.15PREDICTED: transcription factor MYB44 isoform X1 [Cucumis melo][more]
BLAST of Carg25811 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69560.14.1e-5580.99myb domain protein 105[more]
AT1G26780.21.2e-5477.42myb domain protein 117[more]
AT1G73410.12.2e-4876.64myb domain protein 54[more]
AT5G17800.16.3e-4875.45myb domain protein 56[more]
AT1G17950.13.1e-4773.15myb domain protein 52[more]
BLAST of Carg25811 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SEZ4|MY105_ARATH7.4e-5480.99Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1[more]
sp|Q9LQX5|MY117_ARATH2.1e-5377.42Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1[more]
sp|Q5NBM8|CSA_ORYSJ2.9e-5080.00Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV... [more]
sp|Q9FX36|MYB54_ARATH3.9e-4776.64Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=2 SV=1[more]
sp|Q6R053|MYB56_ARATH1.1e-4675.45Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1[more]
BLAST of Carg25811 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LHV6|A0A0A0LHV6_CUCSA1.1e-5481.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G100550 PE=4 SV=1[more]
tr|A0A1S3B420|A0A1S3B420_CUCME5.5e-5481.15transcription factor MYB44 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485791 PE... [more]
tr|A0A1S4DU28|A0A1S4DU28_CUCME5.5e-5481.15transcription factor MYB44 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485791 PE... [more]
tr|A0A067LAW8|A0A067LAW8_JATCU2.3e-5280.31MYB family protein OS=Jatropha curcas OX=180498 GN=JCGZ_15621 PE=4 SV=1[more]
tr|A0A1R3JEH5|A0A1R3JEH5_COCAP3.9e-5279.53Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_06579 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017930Myb_dom
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25811-RACarg25811-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 17..66
e-value: 7.7E-15
score: 65.3
coord: 69..117
e-value: 1.7E-11
score: 54.2
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 70..112
e-value: 1.2E-12
score: 47.7
coord: 18..63
e-value: 2.5E-17
score: 62.7
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 21..62
e-value: 2.95866E-13
score: 59.8966
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 72..112
e-value: 1.38732E-8
score: 46.7998
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 71..132
e-value: 1.4E-16
score: 62.1
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 18..70
e-value: 6.7E-21
score: 76.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..147
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 7..132
NoneNo IPR availablePANTHERPTHR10641:SF473MYB-DOMAIN TRANSCRIPTION FACTOR LOF1-RELATEDcoord: 7..132
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 65..119
score: 24.708
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 13..64
score: 15.81
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 18..111

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg25811CmaCh05G008630Cucurbita maxima (Rimu)carcmaB1477
Carg25811CmoCh01G005140Cucurbita moschata (Rifu)carcmoB1433
Carg25811Cp4.1LG11g07170Cucurbita pepo (Zucchini)carcpeB1486
Carg25811Cp4.1LG02g13700Cucurbita pepo (Zucchini)carcpeB1487
Carg25811MELO3C008549.2Melon (DHL92) v3.6.1carmedB1051
Carg25811Cla97C11G216040Watermelon (97103) v2carwmbB1126
Carg25811Bhi06G000770Wax gourdcarwgoB1255
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg25811Carg20425Silver-seed gourdcarcarB581
The following block(s) are covering this gene:

None