Cp4.1LG09g03420 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG09g03420
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Sarcoplasmic reticulum histidine-rich calcium-binding protein, putative, expressed
Location	Cp4.1LG09 : 2024027 .. 2024836 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACACCAAGAAATTCTTCCAATTGGTTGAGGAGAAGAAGAAGAGAGCTTTGGAGAAGAAGGAAGCTCCATTGAAATGGGAACAAAAACTTGAAGCTGCTGCCAAGGCAAAGGCTGATCATGAGGGAGGCCGGAGAGCAGGTAAGAGAATTCATAAGAAGCACAGGAAACATAGCCACTCTGATTCAGGTGACTATGAGAAGATGAAGGATAGAAAATCCAAGAGAAAACCGAAACGTCGTCGCTCGTCTAATGATGTCAGCAGTGATGAATTTGGTGGCCACTCTGAAGAAGATAGGAGGAAGAAGAGAAACCATAGAAGACATATTCATGATGATTCAAGTTCCGATGAAAGTTACTCCGGTTCTTCTAACAATGATATTGAGACAACTAAAAGAAGTCACTCCCGGCGTCACAAACATCATAGGCGACCTAACTATTCATCATCTGACGATTCTAGCAGTGAGGATGATACTAGTTTGCGAAGGAAAAGGCATGTAAGGCACCACAGGCCCCACCATCGACACGGGCAATCCCATCGATCGTGTAGTATCGATTCTTTAGATTGTAATTATGGCAGGCATGAGGCTAGAAGCCAGTCTTCAGGGAAGTCATCTGATGATAATCATGAAGAAGAATCAGCACTACAATCTCGGCACAAGAGAGAAAATCACCATCACAAACATCGGCACCACCATCATTCAAGTGAGAACAAGCATTCATTCAATGGGTCGACCGAGATCGATGAAAAATATAACGACGATGACCCTGATGGGAATAACCACGATCGATCCAAGAATTCTCATTAA

mRNA sequence

ATGGACACCAAGAAATTCTTCCAATTGGTTGAGGAGAAGAAGAAGAGAGCTTTGGAGAAGAAGGAAGCTCCATTGAAATGGGAACAAAAACTTGAAGCTGCTGCCAAGGCAAAGGCTGATCATGAGGGAGGCCGGAGAGCAGGTAAGAGAATTCATAAGAAGCACAGGAAACATAGCCACTCTGATTCAGGTGACTATGAGAAGATGAAGGATAGAAAATCCAAGAGAAAACCGAAACGTCGTCGCTCGTCTAATGATGTCAGCAGTGATGAATTTGGTGGCCACTCTGAAGAAGATAGGAGGAAGAAGAGAAACCATAGAAGACATATTCATGATGATTCAAGTTCCGATGAAAGTTACTCCGGTTCTTCTAACAATGATATTGAGACAACTAAAAGAAGTCACTCCCGGCGTCACAAACATCATAGGCGACCTAACTATTCATCATCTGACGATTCTAGCAGTGAGGATGATACTAGTTTGCGAAGGAAAAGGCATGTAAGGCACCACAGGCCCCACCATCGACACGGGCAATCCCATCGATCGTGTAGTATCGATTCTTTAGATTGTAATTATGGCAGGCATGAGGCTAGAAGCCAGTCTTCAGGGAAGTCATCTGATGATAATCATGAAGAAGAATCAGCACTACAATCTCGGCACAAGAGAGAAAATCACCATCACAAACATCGGCACCACCATCATTCAAGTGAGAACAAGCATTCATTCAATGGGTCGACCGAGATCGATGAAAAATATAACGACGATGACCCTGATGGGAATAACCACGATCGATCCAAGAATTCTCATTAA

Coding sequence (CDS)

ATGGACACCAAGAAATTCTTCCAATTGGTTGAGGAGAAGAAGAAGAGAGCTTTGGAGAAGAAGGAAGCTCCATTGAAATGGGAACAAAAACTTGAAGCTGCTGCCAAGGCAAAGGCTGATCATGAGGGAGGCCGGAGAGCAGGTAAGAGAATTCATAAGAAGCACAGGAAACATAGCCACTCTGATTCAGGTGACTATGAGAAGATGAAGGATAGAAAATCCAAGAGAAAACCGAAACGTCGTCGCTCGTCTAATGATGTCAGCAGTGATGAATTTGGTGGCCACTCTGAAGAAGATAGGAGGAAGAAGAGAAACCATAGAAGACATATTCATGATGATTCAAGTTCCGATGAAAGTTACTCCGGTTCTTCTAACAATGATATTGAGACAACTAAAAGAAGTCACTCCCGGCGTCACAAACATCATAGGCGACCTAACTATTCATCATCTGACGATTCTAGCAGTGAGGATGATACTAGTTTGCGAAGGAAAAGGCATGTAAGGCACCACAGGCCCCACCATCGACACGGGCAATCCCATCGATCGTGTAGTATCGATTCTTTAGATTGTAATTATGGCAGGCATGAGGCTAGAAGCCAGTCTTCAGGGAAGTCATCTGATGATAATCATGAAGAAGAATCAGCACTACAATCTCGGCACAAGAGAGAAAATCACCATCACAAACATCGGCACCACCATCATTCAAGTGAGAACAAGCATTCATTCAATGGGTCGACCGAGATCGATGAAAAATATAACGACGATGACCCTGATGGGAATAACCACGATCGATCCAAGAATTCTCATTAA

Protein sequence

MDTKKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADHEGGRRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDEFGGHSEEDRRKKRNHRRHIHDDSSSDESYSGSSNNDIETTKRSHSRRHKHHRRPNYSSSDDSSSEDDTSLRRKRHVRHHRPHHRHGQSHRSCSIDSLDCNYGRHEARSQSSGKSSDDNHEEESALQSRHKRENHHHKHRHHHHSSENKHSFNGSTEIDEKYNDDDPDGNNHDRSKNSH

Homology

[Close]

BLAST of Cp4.1LG09g03420 vs. TrEMBL
Match: A0A0A0KWI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611620 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 8.2e-54
Identity = 165/307 (53.75%), Postives = 201/307 (65.47%), Query Frame = 1


Query: 1   MDTKKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD-------------------- 60
           MDTKKF QLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD                    
Sbjct: 1   MDTKKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKIRASKHKRRSVSD 60

Query: 61  ---------HEGGRRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDE 120
                    H GGR+AGKR HKKHRKHSHSDSGD EK KDR+SKR  KR  +S+D S D+
Sbjct: 61  SDTDTESDSHHGGRKAGKRGHKKHRKHSHSDSGDSEKKKDRESKRILKRHHTSHDDSIDK 120

Query: 121 FGGHSEEDRRKKRNHRRHIHDDSSSDESYSGSSNNDIETTKRSHSRRHKHHRRPNYSSSD 180
              HS EDRRKKRNHRRH+ D   SDESYS SS++D+E TKRSHSRR +HHRR +YSSSD
Sbjct: 121 -SDHSGEDRRKKRNHRRHVRDSLRSDESYSSSSDDDVEITKRSHSRRPRHHRRIDYSSSD 180

Query: 181 DSSSEDDTSLRRKRHVRHHRPHHRHGQSHRSCSIDSLDCNYGRHEARSQSSGKSSDDNHE 240
           DSSS+D TS RRK+HV+HH+PHH+H  ++ SC   S D     +  R +   K    +H+
Sbjct: 181 DSSSDDFTS-RRKKHVKHHKPHHQHNGTYSSCDEFSRDV----YTTRRKKHVKHHKSHHQ 240

Query: 241 EE-SALQSRHKRENHHH--------KHRHHHHSSENKHSFNGSTEIDEKYNDDDPDGNNH 270
            E S  QS  K  + +H        +H+ +HH   NKH  +G  +ID K++D++ +  NH
Sbjct: 241 HEPSRSQSLGKSSDDNHEESALLQSRHKSNHH---NKHP-HGLAQIDGKHSDNESNETNH 297

[Close]

BLAST of Cp4.1LG09g03420 vs. TrEMBL
Match: B9HJ82_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s12570g PE=4 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 8.5e-35
Identity = 138/316 (43.67%), Postives = 178/316 (56.33%), Query Frame = 1


Query: 1   MDTKKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADHEG----------------- 60
           MD KKF QLVEEKKKRALE+KEAPLKWEQKLEAA KAKAD E                  
Sbjct: 1   MDCKKFMQLVEEKKKRALERKEAPLKWEQKLEAAVKAKADAEAKVRKQKAAKHKRRSVSN 60

Query: 61  -----------GRRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDEF 120
                      GR++ KR HKKHRKH HSDSG+ EK +++K K K +R+     VSSDEF
Sbjct: 61  SDTDSDSDISDGRKSRKRTHKKHRKHFHSDSGENEKRREKKPKHKSRRQSL---VSSDEF 120

Query: 121 GGHSEEDRRKKRNHRRHIHDDSSSDESYSGSSNNDIETTKR-SHSRRHKHHRRPNYSSSD 180
              SEE+RRK+++ R   H +S SD S + SS++D E  KR S S+ HK  R+   S+SD
Sbjct: 121 QSDSEEERRKRKHRRHRHHRNSRSDSSDNDSSSHDDEAVKRRSRSKHHKRRRQSESSASD 180

Query: 181 DSSSEDDTSLRRKRHVRHHRPHHRHGQSH---------------------RSCSIDSLDC 240
            +S ED+ ++RR+ H +HH+ HHR  +S+                     RS S+DS   
Sbjct: 181 STSDEDNGAIRRRGHSKHHKCHHRRSESYDSGSSGDEHRTSHAKHNKRRQRSHSMDSRSS 240

Query: 241 NY-GRHEARSQSSGKSSDDNHEEESALQSRHKRENHH-HKH---RHHHHSSENKHSFNGS 262
           +  G    RS+S GKSSDDN EE   L SRHK+  HH H H   +HHH   E  H  +  
Sbjct: 241 DSDGLGHDRSRSLGKSSDDNVEEADKL-SRHKKSGHHRHNHDKPKHHHSDDEKNHHLHRK 300

[Close]

BLAST of Cp4.1LG09g03420 vs. TrEMBL
Match: A0A067KT15_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09277 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.1e-33
Identity = 142/317 (44.79%), Postives = 179/317 (56.47%), Query Frame = 1


Query: 1   MDTKKFFQLVEEKKKRALEKKEAPLKWEQKLEA----------------AAKAK------ 60
           MD KKF QLVEEKKKRALEKKEAPLKWEQKLEA                AAK K      
Sbjct: 1   MDCKKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAEAEAKERKQKAAKRKRRSVSK 60

Query: 61  ------ADHEGGRRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRRS-SNDVSSDE 120
                 +D   GR++ KR H+KHRKH+HSDSGD EK +++KSKRKPKRR S SND SSD 
Sbjct: 61  SDTDSDSDSNDGRKSRKRSHRKHRKHAHSDSGDNEKRREKKSKRKPKRRSSDSNDDSSDG 120

Query: 121 FGGHSEEDRR-KKRNHRRHIH-----DDSSSDESYSGSSNNDIETTKRSHSRRHKHHRRP 180
           F   SEE+RR KKRNHRRH H     D SS D S   S ++D+   +RSH++ H+ H++ 
Sbjct: 121 FESDSEEERRRKKRNHRRHGHHYSRLDSSSFDRS---SDDDDMAIKRRSHAKHHRRHQQ- 180

Query: 181 NYSSSDDSSSEDDTSLRRKRHVRHHRPHHRHGQSHRSCSID--SLDCNYGRH-------- 240
           + SS  DSSS++D    R+ H +HH+ H R   S  S   D  S   ++ RH        
Sbjct: 181 SQSSVSDSSSDEDNGANRRSHSKHHKHHCRSSDSDLSSDEDRESRATHHKRHQRSQSMDS 240

Query: 241 ----------EARSQSSGKSSDDNHEEESALQSRHKRENHHHKHRHHHHSSENKHSFNGS 263
                     + RS S GKS+DD++EE    +SRH+R  HHH + HH H S + +  N S
Sbjct: 241 SSSGFDVYNSDRRSASLGKSTDDSNEEADK-KSRHRRSGHHH-YTHHKHRSHHSNERNYS 300

[Close]

BLAST of Cp4.1LG09g03420 vs. TrEMBL
Match: A0A067FNK8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040704mg PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.0e-32
Identity = 139/320 (43.44%), Postives = 185/320 (57.81%), Query Frame = 1


Query: 1   MDTKKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADHEG----------------- 60
           MD KKF QLVEEKKKRALE+KEAPLKWEQKLEAAAKAKAD E                  
Sbjct: 1   MDCKKFIQLVEEKKKRALERKEAPLKWEQKLEAAAKAKADAEAKARKSKAAKRKRSVSDS 60

Query: 61  -----------GRRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRR-SSNDVSSDE 120
                      GRR  +R HKKH+KH+HSD GD E+ K++KSKRKPK+R  SS+D SSDE
Sbjct: 61  GADSDSESSDVGRRKRRRGHKKHKKHNHSDLGDNERRKEKKSKRKPKKRSSSSSDDSSDE 120

Query: 121 FGGHSEED---RRKKRNHRRHIHDDSSSDESYSGSSNNDIETTKRSHSRRHKHHRRPNYS 180
           +   SEE+   RRKKRNHRR+ H DS S  S S S ++D    KRSH++ HK + +   S
Sbjct: 121 YEWDSEEERRRRRKKRNHRRYRHHDSRS-ASDSSSDDSDDSRRKRSHAKHHKRNWQSESS 180

Query: 181 SSDDSSSEDDTSLRR------KRH--------------------VRHHRPHHRH-GQSHR 240
            SD SS +DD  +RR      KRH                     + H+ H +H G++H 
Sbjct: 181 GSDSSSEDDDGRIRRTHASQFKRHRCSESSASDSLTNEDAGAGRRKTHKKHPKHPGRTHS 240

Query: 241 SCSIDSLDCNYGRHEARSQSSGKSSDDNHEEESALQSRHKRENHHHKHRHHHHSSENKHS 262
             S ++ D    RH  RS+S GKSSDDNH+++   ++RH+  +H+H H+H  +   +++ 
Sbjct: 241 EDS-ETDDSGGHRHNRRSRSLGKSSDDNHDQQGG-RTRHRSSHHYHHHKHKLNHVVDRNW 300

[Close]

BLAST of Cp4.1LG09g03420 vs. TrEMBL
Match: B9T1V6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0275200 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31
Identity = 130/295 (44.07%), Postives = 160/295 (54.24%), Query Frame = 1


Query: 1   MDTKKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD-------------------- 60
           MD K+F QLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD                    
Sbjct: 1   MDCKRFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKERKQKASKHKRCASKS 60

Query: 61  -------HEGGRRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSN-----DVS 120
                   +  R++ KR HKKHR+H  SDSG+ E+ +++ SKRKPKRR SS+     D S
Sbjct: 61  DTDSDSDSDDVRKSKKRSHKKHRRHISSDSGENERRREKNSKRKPKRRCSSSSDEGTDSS 120

Query: 121 SDEFGGHSEEDRRKKRNHRRHIHDDSSSDESYSGSSNNDIETT--KRSHSRRHKHHRRPN 180
             EF    EE RRKKRNH RH H +S SD S S  S++D      +RSH+RRH+H +   
Sbjct: 121 ESEF---EEERRRKKRNHGRHRHHNSRSDSSASDMSSDDDSQMMKRRSHTRRHRHSQS-- 180

Query: 181 YSSSDDSSSEDDTSLRRKRHVRHHRPHHRHGQSHRSCSIDSLDCNYGRHEARSQSS---- 240
            S+SD SS ED+   RR+ H +HH+ H R        S D     + +H  R Q S    
Sbjct: 181 -SASDSSSDEDNGISRRRNHSKHHKRHRRSESRDSDFSSDEDRRGHWKHHKRHQRSHSID 240

Query: 241 GKSSD----------------DNHEEESALQSRHKRENHHHKHRHHHHSSENKHS 242
            +SSD                D+  EE+  +S+HKR  HHH     HHS E  HS
Sbjct: 241 SRSSDSDGLGCDQRKLSTKSFDHSSEETGKRSKHKRSAHHHDQHRRHHSGEENHS 289

[Close]

BLAST of Cp4.1LG09g03420 vs. TAIR10
Match: AT2G01100.1 (AT2G01100.1 unknown protein)

HSP 1 Score: 92.0 bits (227), Expect = 5.8e-19
Identity = 94/257 (36.58%), Postives = 133/257 (51.75%), Query Frame = 1


Query: 1   MDTKKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADHEGG---------------- 60
           MD KKF Q+VEEKK+R LEK+EAPLKWEQKLEAAA AKAD E                  
Sbjct: 1   MDCKKFIQMVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASE 60

Query: 61  -----------RRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDEFG 120
                      RR  +R H KHR+H+HSDS D ++ K++KS+R+ +R  S +D S+ ++ 
Sbjct: 61  SSSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGDYE 120

Query: 121 GHSEEDRRKK-RNHRRHIHDDSSSDESYSGSSNNDIETTKRSHSRRHKHHRRPNYSSSDD 180
             SE++ R K ++HRRH        + +S     D ++T+    +  KHHRR    +S D
Sbjct: 121 SGSEDELRMKIKHHRRH--------KWHSSRKTCDDDSTEDVRRKHLKHHRRSEVVTSSD 180

Query: 181 SSSEDDTSLRRKRHVRHHRPHHRHGQSHRSCSIDSLDCNYGRHEARSQSSGKSSDDNHEE 230
           S  E      R+R  ++HR  H  G +  S S +    +  R + +     +SS    EE
Sbjct: 181 SEEESG----RRRRGKYHR--HNRGSASSSGSEEDSGKSMKRRQHKRHRLAESSS---EE 235

[Close]

BLAST of Cp4.1LG09g03420 vs. NCBI nr
Match: gi|659091690|ref|XP_008446680.1| (PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Cucumis melo])

HSP 1 Score: 220.7 bits (561), Expect = 3.1e-54
Identity = 168/308 (54.55%), Postives = 202/308 (65.58%), Query Frame = 1


Query: 1   MDTKKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD-------------------- 60
           MDTKKF QLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD                    
Sbjct: 1   MDTKKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKTRASKHKRRSVSD 60

Query: 61  ---------HEGGRRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDE 120
                    H GGR+AGKR HKKHRKHSHSDSGD EK +DR+SKR  KR RSS+D S DE
Sbjct: 61  SDTDTESDSHHGGRKAGKRGHKKHRKHSHSDSGDSEKKRDRESKRILKRHRSSHDDSIDE 120

Query: 121 FGGHSEEDRRKKRNHRRHIHDDSSSDESYSGSSNNDIETTKRSHSRRHKHHRRPNYSSSD 180
              HS EDRRKKRN RRH+HD SSSDESYS S+++D+E TKRSHSRR KHHRR +Y SSD
Sbjct: 121 -SDHSGEDRRKKRNRRRHVHDSSSSDESYSSSNDDDVELTKRSHSRRPKHHRRIDYLSSD 180

Query: 181 DSSSEDDTSLRRKRHVRHHRPHHRHGQSHRSCSIDSLDCNYGR--HEARSQSSGKSSDDN 240
           DSSS+D TS RRK+HV+HH+PHH+H +++ SC       ++GR  +  R +   K    +
Sbjct: 181 DSSSDDFTS-RRKKHVKHHKPHHQHDRTYSSCD------DFGRDVYTTRRKKHVKRHKSH 240

Query: 241 H-EEESALQSRHKRENHHH---------KHRHHHHSSENKHSFNGSTEIDEKYNDDDPDG 268
           H  E S  QS  K  + +H         +H+  HH   NKH  +G  +ID K+ D++ D 
Sbjct: 241 HRHERSRSQSLGKSSDDNHEESALLQQSRHKSDHH---NKHP-HGLAQIDGKHPDNESDE 296

[Close]

BLAST of Cp4.1LG09g03420 vs. NCBI nr
Match: gi|449434564|ref|XP_004135066.1| (PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 1.2e-53
Identity = 165/307 (53.75%), Postives = 201/307 (65.47%), Query Frame = 1


Query: 1   MDTKKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD-------------------- 60
           MDTKKF QLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD                    
Sbjct: 1   MDTKKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKIRASKHKRRSVSD 60

Query: 61  ---------HEGGRRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDE 120
                    H GGR+AGKR HKKHRKHSHSDSGD EK KDR+SKR  KR  +S+D S D+
Sbjct: 61  SDTDTESDSHHGGRKAGKRGHKKHRKHSHSDSGDSEKKKDRESKRILKRHHTSHDDSIDK 120

Query: 121 FGGHSEEDRRKKRNHRRHIHDDSSSDESYSGSSNNDIETTKRSHSRRHKHHRRPNYSSSD 180
              HS EDRRKKRNHRRH+ D   SDESYS SS++D+E TKRSHSRR +HHRR +YSSSD
Sbjct: 121 -SDHSGEDRRKKRNHRRHVRDSLRSDESYSSSSDDDVEITKRSHSRRPRHHRRIDYSSSD 180

Query: 181 DSSSEDDTSLRRKRHVRHHRPHHRHGQSHRSCSIDSLDCNYGRHEARSQSSGKSSDDNHE 240
           DSSS+D TS RRK+HV+HH+PHH+H  ++ SC   S D     +  R +   K    +H+
Sbjct: 181 DSSSDDFTS-RRKKHVKHHKPHHQHNGTYSSCDEFSRDV----YTTRRKKHVKHHKSHHQ 240

Query: 241 EE-SALQSRHKRENHHH--------KHRHHHHSSENKHSFNGSTEIDEKYNDDDPDGNNH 270
            E S  QS  K  + +H        +H+ +HH   NKH  +G  +ID K++D++ +  NH
Sbjct: 241 HEPSRSQSLGKSSDDNHEESALLQSRHKSNHH---NKHP-HGLAQIDGKHSDNESNETNH 297

[Close]

BLAST of Cp4.1LG09g03420 vs. NCBI nr
Match: gi|720086164|ref|XP_010243755.1| (PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Nelumbo nucifera])

HSP 1 Score: 164.1 bits (414), Expect = 3.4e-37
Identity = 144/310 (46.45%), Postives = 180/310 (58.06%), Query Frame = 1


Query: 1   MDTKKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD-------------------- 60
           MD+KKF QLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD                    
Sbjct: 1   MDSKKFMQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKERKIKAAKHKRKSVST 60

Query: 61  ---------HEGGRRAGKRIHKKHRKHSHSD-SGDYEKMKDRKSKRKPKRR--RSSNDVS 120
                    ++ GR+  KR HKKHRK SHSD SGD EK +++KSKR+PK+    SS++ S
Sbjct: 61  SDDDSDSESNDSGRKRAKRSHKKHRKQSHSDSSGDNEKKREKKSKRRPKKHSSSSSDESS 120

Query: 121 SDEFGGHSEEDRRK-----KRNHRRHIHDDSSSDESYSGSSNNDIETTKRSHSRRHKHHR 180
            +E+   SEED+R+     K+ HRRH+ D  SS    S   N  +   +++H+R HKHHR
Sbjct: 121 GNEYYSDSEEDQRRKKRAHKKRHRRHVSDSDSSASDSSSDENGAL--ARKNHTRHHKHHR 180

Query: 181 RPNYSSSDDSSSEDDTSLRRKRHVRHHRPHHRHGQSHRSCSIDSLDCNYGRHEARSQSSG 240
           +  + S+  SS  DD    R++H RHH+ HHR   S    S DS D +Y R E RSQS G
Sbjct: 181 KTVHDST--SSDSDD---NRRQHARHHKRHHR---SSADESTDS-DSDYHRDEGRSQSLG 240

Query: 241 KSSDDNHEEESALQSRHK----RENHHHKHRHHHHSSENKHSFNGSTEIDEKYNDDDPDG 270
           KSSDDNH EES  Q RHK    R  HHH  RHHHH   +  + N      E  N  +P+G
Sbjct: 241 KSSDDNH-EESGKQKRHKKCHHRHGHHHHRRHHHHKPHHAAADNNGNH--EHRNHSEPNG 296

[Close]

BLAST of Cp4.1LG09g03420 vs. NCBI nr
Match: gi|743784601|ref|XP_011022897.1| (PREDICTED: CAX-interacting protein 4 [Populus euphratica])

HSP 1 Score: 160.6 bits (405), Expect = 3.8e-36
Identity = 141/318 (44.34%), Postives = 179/318 (56.29%), Query Frame = 1


Query: 1   MDTKKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADHEG----------------- 60
           MD KKF QLVEEKKKRALE+KEAPLKWEQKLEAAAKAKAD E                  
Sbjct: 1   MDCKKFIQLVEEKKKRALERKEAPLKWEQKLEAAAKAKADAEAKVRKQKAAKHKRRSVSN 60

Query: 61  -----------GRRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDEF 120
                      GR++ KR HKKHRKH HSDSG+ EK +++K K+K +R+     VSSDEF
Sbjct: 61  SDTDSDSDISDGRKSRKRTHKKHRKHFHSDSGENEKRREKKPKKKSRRQSL---VSSDEF 120

Query: 121 GGHSEEDRRKKRNHRRHIHDDSSSDESYSGSSNNDIETTKR-SHSRRHKHHRRPNYSSSD 180
              SEE+RRK+++ R   H +S SD S + SS++D E  KR S S+ HK  R+   S+SD
Sbjct: 121 QSDSEEERRKRKHRRHRHHHNSRSDSSDNDSSSHDDEAVKRRSRSKHHKRRRQSESSASD 180

Query: 181 DSSSEDDTSLRRKRHVRHHRPHHRHGQSH---------------------RSCSIDSLDC 240
            SS ED+ ++RR+ H +HH+ HHR  +S+                     RS S+DS   
Sbjct: 181 SSSDEDNDAIRRRGHSKHHKCHHRRSESYDSGLSGDEHGTSRAKHNKHRQRSHSMDSRSS 240

Query: 241 NYGR--HEARSQSSGKSSDDNHEEESALQSRHKRENHHH----KHRHHHHSSENKHSFNG 263
           + G   H  RS+S GKSSDDN EE   L  RHK+  HH     KH+HHH   E  H  + 
Sbjct: 241 DSGGLGHGWRSRSLGKSSDDNVEEADKL-LRHKKSGHHRHNHDKHKHHHSDDEKNHHLHL 300

[Close]

BLAST of Cp4.1LG09g03420 vs. NCBI nr
Match: gi|566183628|ref|XP_002312425.2| (hypothetical protein POPTR_0008s12570g [Populus trichocarpa])

HSP 1 Score: 155.6 bits (392), Expect = 1.2e-34
Identity = 138/316 (43.67%), Postives = 178/316 (56.33%), Query Frame = 1


Query: 1   MDTKKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADHEG----------------- 60
           MD KKF QLVEEKKKRALE+KEAPLKWEQKLEAA KAKAD E                  
Sbjct: 1   MDCKKFMQLVEEKKKRALERKEAPLKWEQKLEAAVKAKADAEAKVRKQKAAKHKRRSVSN 60

Query: 61  -----------GRRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDEF 120
                      GR++ KR HKKHRKH HSDSG+ EK +++K K K +R+     VSSDEF
Sbjct: 61  SDTDSDSDISDGRKSRKRTHKKHRKHFHSDSGENEKRREKKPKHKSRRQSL---VSSDEF 120

Query: 121 GGHSEEDRRKKRNHRRHIHDDSSSDESYSGSSNNDIETTKR-SHSRRHKHHRRPNYSSSD 180
              SEE+RRK+++ R   H +S SD S + SS++D E  KR S S+ HK  R+   S+SD
Sbjct: 121 QSDSEEERRKRKHRRHRHHRNSRSDSSDNDSSSHDDEAVKRRSRSKHHKRRRQSESSASD 180

Query: 181 DSSSEDDTSLRRKRHVRHHRPHHRHGQSH---------------------RSCSIDSLDC 240
            +S ED+ ++RR+ H +HH+ HHR  +S+                     RS S+DS   
Sbjct: 181 STSDEDNGAIRRRGHSKHHKCHHRRSESYDSGSSGDEHRTSHAKHNKRRQRSHSMDSRSS 240

Query: 241 NY-GRHEARSQSSGKSSDDNHEEESALQSRHKRENHH-HKH---RHHHHSSENKHSFNGS 262
           +  G    RS+S GKSSDDN EE   L SRHK+  HH H H   +HHH   E  H  +  
Sbjct: 241 DSDGLGHDRSRSLGKSSDDNVEEADKL-SRHKKSGHHRHNHDKPKHHHSDDEKNHHLHRK 300

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g03420 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG09g03420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWI8_CUCSA	8.2e-54	53.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611620 PE=4 SV=1	[more]
B9HJ82_POPTR	8.5e-35	43.67	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s12570g PE=4 SV=2	[more]
A0A067KT15_JATCU	2.1e-33	44.79	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09277 PE=4 SV=1	[more]
A0A067FNK8_CITSI	1.0e-32	43.44	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040704mg PE=4 SV=1	[more]
B9T1V6_RICCO	1.1e-31	44.07	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0275200 PE=4 SV=1	[more]

BLAST of Cp4.1LG09g03420 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01100.1	5.8e-19	36.58	unknown protein	[more]

BLAST of Cp4.1LG09g03420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091690\|ref\|XP_008446680.1\|	3.1e-54	54.55	PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Cucumi...	[more]
gi\|449434564\|ref\|XP_004135066.1\|	1.2e-53	53.75	PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Cucumi...	[more]
gi\|720086164\|ref\|XP_010243755.1\|	3.4e-37	46.45	PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Nelumb...	[more]
gi\|743784601\|ref\|XP_011022897.1\|	3.8e-36	44.34	PREDICTED: CAX-interacting protein 4 [Populus euphratica]	[more]
gi\|566183628\|ref\|XP_002312425.2\|	1.2e-34	43.67	hypothetical protein POPTR_0008s12570g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g03420.1	Cp4.1LG09g03420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37715	FAMILY NOT NAMED	coord: 2..256 score: 4.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG09g03420	CmaCh18G009820	Cucurbita maxima (Rimu)	cmacpeB415
Cp4.1LG09g03420	CmaCh04G014710	Cucurbita maxima (Rimu)	cmacpeB700
Cp4.1LG09g03420	CmoCh18G009900	Cucurbita moschata (Rifu)	cmocpeB376
Cp4.1LG09g03420	CmoCh04G015440	Cucurbita moschata (Rifu)	cmocpeB651
Cp4.1LG09g03420	Lsi04G002030	Bottle gourd (USVL1VR-Ls)	cpelsiB032
Cp4.1LG09g03420	CsaV3_5G034830	Cucumber (Chinese Long) v3	cpecucB0043
Cp4.1LG09g03420	Bhi07G001047	Wax gourd	cpewgoB0058
Cp4.1LG09g03420	Carg01869	Silver-seed gourd	carcpeB1169
Cp4.1LG09g03420	Carg19030	Silver-seed gourd	carcpeB1464

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG09g03420	Cucumber (Chinese Long) v3	cpecucB0053
Cp4.1LG09g03420	Wax gourd	cpewgoB0020
Cp4.1LG09g03420	Cucurbita pepo (Zucchini)	cpecpeB022
Cp4.1LG09g03420	Cucurbita pepo (Zucchini)	cpecpeB040
Cp4.1LG09g03420	Cucumber (Gy14) v1	cgycpeB0734
Cp4.1LG09g03420	Cucumber (Gy14) v1	cgycpeB0745
Cp4.1LG09g03420	Cucurbita maxima (Rimu)	cmacpeB300
Cp4.1LG09g03420	Cucurbita maxima (Rimu)	cmacpeB698
Cp4.1LG09g03420	Cucurbita moschata (Rifu)	cmocpeB263
Cp4.1LG09g03420	Cucurbita moschata (Rifu)	cmocpeB650
Cp4.1LG09g03420	Wild cucumber (PI 183967)	cpecpiB036
Cp4.1LG09g03420	Wild cucumber (PI 183967)	cpecpiB044
Cp4.1LG09g03420	Cucumber (Chinese Long) v2	cpecuB041
Cp4.1LG09g03420	Cucumber (Chinese Long) v2	cpecuB049
Cp4.1LG09g03420	Bottle gourd (USVL1VR-Ls)	cpelsiB020
Cp4.1LG09g03420	Watermelon (Charleston Gray)	cpewcgB024
Cp4.1LG09g03420	Watermelon (Charleston Gray)	cpewcgB045
Cp4.1LG09g03420	Watermelon (97103) v1	cpewmB031
Cp4.1LG09g03420	Watermelon (97103) v1	cpewmB037
Cp4.1LG09g03420	Melon (DHL92) v3.5.1	cpemeB018
Cp4.1LG09g03420	Melon (DHL92) v3.5.1	cpemeB024
Cp4.1LG09g03420	Cucumber (Gy14) v2	cgybcpeB581
Cp4.1LG09g03420	Cucumber (Gy14) v2	cgybcpeB590
Cp4.1LG09g03420	Melon (DHL92) v3.6.1	cpemedB023
Cp4.1LG09g03420	Melon (DHL92) v3.6.1	cpemedB028