CmoCh04G015440 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G015440
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr04 : 7901626 .. 7902477 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACACCAAGAAATTCATCCAATTGGTTGAGGAGAAGAAGAGGAGAGCTTTGGAGAAGAAGGAAGCCCCATTGAAATGGGAACAAAGACTTGAAGCTGCTGCTAAGGCAGAGGCTGCTGAAGCCAAAGCAAGGAAGCTTAAAGCTGCCAAGCATAAAAGAAGATCAGTATCAGATTCTGATACTGATACAGAAAGTGATAGCCATGAGCGAGGAAGGAAAGCAGGTAAGAGAACTCATAAGAAACACAGGAGACATAGCCACTCTGATTCAGGTGACAGTGAGAAGAGGAAAGATAGAAGATCTAAGAGAAAGCTGAAACGACATCAATCATCTCACGATGACAGCAGTGATGAATTTGATGGACACTCTGATGAAGGTAGGAGGAAGAAGAGAAACCATAGAAGACATGCGCATGACAATTCAAGTTCTGATGAAAGTTACTCTAGTTCTAGTGATGATGATGTTGAGACAAGAAAAAGATGTCGTTCCAGGCATAACAGACATCATAGACATATTGGCTATTCATCATCTGATGATTCTAGCAGTGAGAATAATAATCGAAGGGAAAAGCGTGGAAGGCATCGTCAACACGAGCAGTCCCATCGATCATGTAGTATTGATTCATTAGATTGTAATCACTGGAGGTGTGATGCTAGAAGCCAGGCCTCAGGGAGGTTATCTGATGCTGATCGTGAAGATTCAGCATTACAATACAGGCACAAGAGTAGCCACCCTAACAAACACCGGCACCATCACTCAGGTGCCGGTGGTTTGACCCAGATCGATGAAGAACATGCTGACAATAACTCTGATGGAAATAACCATGGTCGTGCTAAGGATTCTCATTAA

mRNA sequence

ATGGACACCAAGAAATTCATCCAATTGGTTGAGGAGAAGAAGAGGAGAGCTTTGGAGAAGAAGGAAGCCCCATTGAAATGGGAACAAAGACTTGAAGCTGCTGCTAAGGCAGAGGCTGCTGAAGCCAAAGCAAGGAAGCTTAAAGCTGCCAAGCATAAAAGAAGATCAGTATCAGATTCTGATACTGATACAGAAAGTGATAGCCATGAGCGAGGAAGGAAAGCAGGTAAGAGAACTCATAAGAAACACAGGAGACATAGCCACTCTGATTCAGGTGACAGTGAGAAGAGGAAAGATAGAAGATCTAAGAGAAAGCTGAAACGACATCAATCATCTCACGATGACAGCAGTGATGAATTTGATGGACACTCTGATGAAGGTAGGAGGAAGAAGAGAAACCATAGAAGACATGCGCATGACAATTCAAGTTCTGATGAAAGTTACTCTAGTTCTAGTGATGATGATGTTGAGACAAGAAAAAGATGTCGTTCCAGGCATAACAGACATCATAGACATATTGGCTATTCATCATCTGATGATTCTAGCAGTGAGAATAATAATCGAAGGGAAAAGCGTGGAAGGCATCGTCAACACGAGCAGTCCCATCGATCATGTAGTATTGATTCATTAGATTGTAATCACTGGAGGTGTGATGCTAGAAGCCAGGCCTCAGGGAGGTTATCTGATGCTGATCGTGAAGATTCAGCATTACAATACAGGCACAAGAGTAGCCACCCTAACAAACACCGGCACCATCACTCAGGTGCCGGTGGTTTGACCCAGATCGATGAAGAACATGCTGACAATAACTCTGATGGAAATAACCATGGTCGTGCTAAGGATTCTCATTAA

Coding sequence (CDS)

ATGGACACCAAGAAATTCATCCAATTGGTTGAGGAGAAGAAGAGGAGAGCTTTGGAGAAGAAGGAAGCCCCATTGAAATGGGAACAAAGACTTGAAGCTGCTGCTAAGGCAGAGGCTGCTGAAGCCAAAGCAAGGAAGCTTAAAGCTGCCAAGCATAAAAGAAGATCAGTATCAGATTCTGATACTGATACAGAAAGTGATAGCCATGAGCGAGGAAGGAAAGCAGGTAAGAGAACTCATAAGAAACACAGGAGACATAGCCACTCTGATTCAGGTGACAGTGAGAAGAGGAAAGATAGAAGATCTAAGAGAAAGCTGAAACGACATCAATCATCTCACGATGACAGCAGTGATGAATTTGATGGACACTCTGATGAAGGTAGGAGGAAGAAGAGAAACCATAGAAGACATGCGCATGACAATTCAAGTTCTGATGAAAGTTACTCTAGTTCTAGTGATGATGATGTTGAGACAAGAAAAAGATGTCGTTCCAGGCATAACAGACATCATAGACATATTGGCTATTCATCATCTGATGATTCTAGCAGTGAGAATAATAATCGAAGGGAAAAGCGTGGAAGGCATCGTCAACACGAGCAGTCCCATCGATCATGTAGTATTGATTCATTAGATTGTAATCACTGGAGGTGTGATGCTAGAAGCCAGGCCTCAGGGAGGTTATCTGATGCTGATCGTGAAGATTCAGCATTACAATACAGGCACAAGAGTAGCCACCCTAACAAACACCGGCACCATCACTCAGGTGCCGGTGGTTTGACCCAGATCGATGAAGAACATGCTGACAATAACTCTGATGGAAATAACCATGGTCGTGCTAAGGATTCTCATTAA

Homology

[Close]

BLAST of CmoCh04G015440 vs. TrEMBL
Match: A0A0A0KWI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611620 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.8e-67
Identity = 186/300 (62.00%), Postives = 211/300 (70.33%), Query Frame = 1


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MDTKKFIQLVEEKK+RALEKKEAPLKWEQ+LEAAAKA+A AEAKARK++A+KHKRRSVSD
Sbjct: 1   MDTKKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKIRASKHKRRSVSD 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDE 120
           SDTDTESDSH  GRKAGKR HKKHR+HSHSDSGDSEK+KDR SKR LKRH +SHDDS D+
Sbjct: 61  SDTDTESDSHHGGRKAGKRGHKKHRKHSHSDSGDSEKKKDRESKRILKRHHTSHDDSIDK 120

Query: 121 FDGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSD 180
            D HS E RRKKRNHRRH  D+  SDESYSSSSDDDVE  KR  SR  RHHR I YSSSD
Sbjct: 121 SD-HSGEDRRKKRNHRRHVRDSLRSDESYSSSSDDDVEITKRSHSRRPRHHRRIDYSSSD 180

Query: 181 DSSSEN-NNRREKRGR----HRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADRED 240
           DSSS++  +RR+K  +    H QH  ++ SC   S D    R   +       S    E 
Sbjct: 181 DSSSDDFTSRRKKHVKHHKPHHQHNGTYSSCDEFSRDVYTTR--RKKHVKHHKSHHQHEP 240

Query: 241 SALQYRHKSSHPN---------KHRHHHSG--AGGLTQIDEEHADNNSDGNNHGRAKDSH 284
           S  Q   KSS  N         +H+ +H      GL QID +H+DN S+  NH RAKD H
Sbjct: 241 SRSQSLGKSSDDNHEESALLQSRHKSNHHNKHPHGLAQIDGKHSDNESNETNHDRAKDYH 297

[Close]

BLAST of CmoCh04G015440 vs. TrEMBL
Match: A0A067KT15_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09277 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40
Identity = 146/298 (48.99%), Postives = 183/298 (61.41%), Query Frame = 1


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MD KKFIQLVEEKK+RALEKKEAPLKWEQ+LEAAAKA+A AEAK RK KAAK KRRSVS 
Sbjct: 1   MDCKKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAEAEAKERKQKAAKRKRRSVSK 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQS-SHDDSSD 120
           SDTD++SDS++ GRK+ KR+H+KHR+H+HSDSGD+EKR++++SKRK KR  S S+DDSSD
Sbjct: 61  SDTDSDSDSND-GRKSRKRSHRKHRKHAHSDSGDNEKRREKKSKRKPKRRSSDSNDDSSD 120

Query: 121 EFDGHS-DEGRRKKRNHRRHAHDNSSSDESY--SSSSDDDVETRKRCRSRHNRHHRHIGY 180
            F+  S +E RRKKRNHRRH H  S  D S    SS DDD+  ++R  ++H+R H+    
Sbjct: 121 GFESDSEEERRRKKRNHRRHGHHYSRLDSSSFDRSSDDDDMAIKRRSHAKHHRRHQQSQS 180

Query: 181 SSSDDSSSENN--NRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADRE 240
           S SD SS E+N  NRR     H+ H                     RS  S   SD DRE
Sbjct: 181 SVSDSSSDEDNGANRRSHSKHHKHH--------------------CRSSDSDLSSDEDRE 240

Query: 241 DSALQYRHKSSHPNKHRHHHSGAGGLTQIDEEHADNNS--------DGNNHGRAKDSH 284
                   +++H  +H+   S     +  D  ++D  S        D N     K  H
Sbjct: 241 S-------RATHHKRHQRSQSMDSSSSGFDVYNSDRRSASLGKSTDDSNEEADKKSRH 270

[Close]

BLAST of CmoCh04G015440 vs. TrEMBL
Match: M5XXI2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008721mg PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 7.1e-40
Identity = 138/284 (48.59%), Postives = 179/284 (63.03%), Query Frame = 1


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MDT++F+QLVEEKK+RALEKKEAPLKWEQ+LEAAAKA+A AEAK RKLK++KHKRRSVS 
Sbjct: 1   MDTRRFMQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKERKLKSSKHKRRSVSV 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDE 120
           SD D+++DS +  RK+ KRTHKKH++H+HSD+ DSEKRK+++SKRK KRH SS       
Sbjct: 61  SDNDSDTDSSDGRRKSSKRTHKKHKKHAHSDTSDSEKRKEKKSKRKPKRHSSS------- 120

Query: 121 FDGHSDEGRRKKRNHRRHAHDNSSSDESYS-SSSDDDVETRKRCRSRHNRHHRHIGYSSS 180
               S   +RKKRNH+RH H +S SD   S SSSDDD+ET KR  S+H+R H+    S S
Sbjct: 121 ----SRNRKRKKRNHKRHRHHDSRSDSGASNSSSDDDIETVKRSHSKHHRRHQRSD-SDS 180

Query: 181 DDSSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQ 240
             S S+ + RR +RG H +H + HR     S D + +                 ED  ++
Sbjct: 181 SGSYSDEDERRIRRG-HSKHHKRHRQLRSLSPDSSSY-----------------EDGDVR 240

Query: 241 YRHKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKDS 283
            +  + H  +HR   S       +D   AD  SD + H R   S
Sbjct: 241 RKRHAKHRKRHRRSRS-----PSVDSRSAD--SDSHLHDRRSRS 247

[Close]

BLAST of CmoCh04G015440 vs. TrEMBL
Match: A0A059D7I4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02880 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-37
Identity = 134/287 (46.69%), Postives = 179/287 (62.37%), Query Frame = 1


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MD KKFIQLVEEKK+RALEKKEAPLKWEQ+LEAAAKA+A AEAK RKLKAAKH+RRS S 
Sbjct: 1   MDCKKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKQRKLKAAKHRRRSGSS 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQS-SHDDSSD 120
           SD+ ++SDS  +  K  +R+HKKHR+ +HS S D EKRK+++S+RK +R  S + DDSSD
Sbjct: 61  SDSGSDSDSDAKEHKKRRRSHKKHRKGAHSGSSDDEKRKEKKSRRKQRRGSSGTSDDSSD 120

Query: 121 EFDGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSD--DDVETRKRCRSRHNRHHRHIGYS 180
           E+D   +E RRKKR+H+R  H++S  D +  SSS+  DD   R+R R+RH+RH+R +  S
Sbjct: 121 EYDSEFEEERRKKRSHKRRRHNDSRPDSTADSSSEDSDDERIRRRRRARHHRHNRRVKSS 180

Query: 181 SSDDSSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSA 240
             DDSS E      KR   + H++   S S DS                  S ++ ED  
Sbjct: 181 GPDDSSDEEEAAVRKRSHTKHHKRQQYSESSDS-----------------GSSSEVEDGE 240

Query: 241 LQYRHKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKDSH 284
           ++ +  S H   H+   S    L+  DE   D  S   + G++ D +
Sbjct: 241 IRRKKHSKHHKHHKRSRSQDLDLSDSDENGHDQRS--RSLGKSSDDN 268

[Close]

BLAST of CmoCh04G015440 vs. TrEMBL
Match: A0A142CD07_9LAMI (At5g03900-like protein OS=Catalpa bungei PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.9e-37
Identity = 131/277 (47.29%), Postives = 170/277 (61.37%), Query Frame = 1


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEAAEAKARKLKAAKHKRRSVSDS 60
           MD KKF+QLVEEKK+R L KKEAPLKWEQ+LEAAAKA+A EAK RK KAAKHKRRSVS S
Sbjct: 1   MDAKKFMQLVEEKKKRVLAKKEAPLKWEQKLEAAAKADA-EAKERKAKAAKHKRRSVSVS 60

Query: 61  DTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEF 120
           D+D++SDS E GRK  K++HK+ R+H+HSDSGD EKR+D++SK+K +R  S  DDSS+E 
Sbjct: 61  DSDSDSDSPEEGRKRTKKSHKRQRKHNHSDSGDHEKRRDKKSKQKPRRRSSDSDDSSEET 120

Query: 121 DGHSDEGRRKKRNH--RRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSS 180
           D   +E RRKK  H  RRH+  + SS +S SSS ++D   R+R   +H +HHR    S  
Sbjct: 121 DSELEE-RRKKHGHKKRRHSSISDSSSDSDSSSDENDDAVRRRNNIKHPKHHRQTHSSHL 180

Query: 181 DDSSSENNN--RREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSA 240
           D SS ++++  RR    +HR+H +   S S DSL                  +ADR+   
Sbjct: 181 DSSSDDDDDAIRRRTHTKHRKHHKRSHSSSSDSLSD---------------EEADRKKRR 240

Query: 241 LQYRHKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDG 274
            ++RH  SH       +        I     DN   G
Sbjct: 241 SKHRHSRSHDTSDSDGYRDGRRSRSIGRSSDDNKEIG 260

[Close]

BLAST of CmoCh04G015440 vs. TAIR10
Match: AT2G01100.1 (AT2G01100.1 unknown protein)

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-27
Identity = 106/265 (40.00%), Postives = 153/265 (57.74%), Query Frame = 1


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MD KKFIQ+VEEKKRR LEK+EAPLKWEQ+LEAAA A+A  E K ++ K  K K+R+ S+
Sbjct: 1   MDCKKFIQMVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASE 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDE 120
           S   +ESDS    R+  +R+H KHRRH+HSDS DS++RK+++S+R+ +R  S  DDS+ +
Sbjct: 61  S--SSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGD 120

Query: 121 FD-GHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSS 180
           ++ G  DE R K ++HRRH        + +SS    D ++ +  R +H +HHR     +S
Sbjct: 121 YESGSEDELRMKIKHHRRH--------KWHSSRKTCDDDSTEDVRRKHLKHHRRSEVVTS 180

Query: 181 DDSSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQ 240
            DS  E+  RR  RG++ +H +   S S    D        R     RL+++  E+    
Sbjct: 181 SDSEEESGRRR--RGKYHRHNRGSASSSGSEEDSGK-SMKRRQHKRHRLAESSSEEDGAM 240

Query: 241 YRHKSSHPNKHRHHHSGAGGLTQID 264
            R         RHH  G    ++ D
Sbjct: 241 RR--------TRHHKHGRDSASESD 244

[Close]

BLAST of CmoCh04G015440 vs. NCBI nr
Match: gi|659091690|ref|XP_008446680.1| (PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Cucumis melo])

HSP 1 Score: 264.2 bits (674), Expect = 2.6e-67
Identity = 185/299 (61.87%), Postives = 211/299 (70.57%), Query Frame = 1


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MDTKKFIQLVEEKK+RALEKKEAPLKWEQ+LEAAAKA+A AEAKARK +A+KHKRRSVSD
Sbjct: 1   MDTKKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKTRASKHKRRSVSD 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDE 120
           SDTDTESDSH  GRKAGKR HKKHR+HSHSDSGDSEK++DR SKR LKRH+SSHDDS DE
Sbjct: 61  SDTDTESDSHHGGRKAGKRGHKKHRKHSHSDSGDSEKKRDRESKRILKRHRSSHDDSIDE 120

Query: 121 FDGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSD 180
            D HS E RRKKRN RRH HD+SSSDESYSSS+DDDVE  KR  SR  +HHR I Y SSD
Sbjct: 121 SD-HSGEDRRKKRNRRRHVHDSSSSDESYSSSNDDDVELTKRSHSRRPKHHRRIDYLSSD 180

Query: 181 DSSSEN-NNRREKRGR----HRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADRED 240
           DSSS++  +RR+K  +    H QH++++ SC  D    + +    +       S    E 
Sbjct: 181 DSSSDDFTSRRKKHVKHHKPHHQHDRTYSSC--DDFGRDVYTTRRKKHVKRHKSHHRHER 240

Query: 241 SALQYRHKSSHPN------------KHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKD 282
           S  Q   KSS  N            K  HH+    GL QID +H DN SD  NH RAKD
Sbjct: 241 SRSQSLGKSSDDNHEESALLQQSRHKSDHHNKHPHGLAQIDGKHPDNESDETNHDRAKD 296

[Close]

BLAST of CmoCh04G015440 vs. NCBI nr
Match: gi|449434564|ref|XP_004135066.1| (PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 1.3e-66
Identity = 186/300 (62.00%), Postives = 211/300 (70.33%), Query Frame = 1


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MDTKKFIQLVEEKK+RALEKKEAPLKWEQ+LEAAAKA+A AEAKARK++A+KHKRRSVSD
Sbjct: 1   MDTKKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKIRASKHKRRSVSD 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDE 120
           SDTDTESDSH  GRKAGKR HKKHR+HSHSDSGDSEK+KDR SKR LKRH +SHDDS D+
Sbjct: 61  SDTDTESDSHHGGRKAGKRGHKKHRKHSHSDSGDSEKKKDRESKRILKRHHTSHDDSIDK 120

Query: 121 FDGHSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSD 180
            D HS E RRKKRNHRRH  D+  SDESYSSSSDDDVE  KR  SR  RHHR I YSSSD
Sbjct: 121 SD-HSGEDRRKKRNHRRHVRDSLRSDESYSSSSDDDVEITKRSHSRRPRHHRRIDYSSSD 180

Query: 181 DSSSEN-NNRREKRGR----HRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADRED 240
           DSSS++  +RR+K  +    H QH  ++ SC   S D    R   +       S    E 
Sbjct: 181 DSSSDDFTSRRKKHVKHHKPHHQHNGTYSSCDEFSRDVYTTR--RKKHVKHHKSHHQHEP 240

Query: 241 SALQYRHKSSHPN---------KHRHHHSG--AGGLTQIDEEHADNNSDGNNHGRAKDSH 284
           S  Q   KSS  N         +H+ +H      GL QID +H+DN S+  NH RAKD H
Sbjct: 241 SRSQSLGKSSDDNHEESALLQSRHKSNHHNKHPHGLAQIDGKHSDNESNETNHDRAKDYH 297

[Close]

BLAST of CmoCh04G015440 vs. NCBI nr
Match: gi|225424146|ref|XP_002283977.1| (PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Vitis vinifera])

HSP 1 Score: 185.7 bits (470), Expect = 1.2e-43
Identity = 142/281 (50.53%), Postives = 185/281 (65.84%), Query Frame = 1


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MD KKFIQLVEEKK+RALEKKEAPLKWEQ+LEAA+KA+A AEAK RKLKAA+HKRRSVS+
Sbjct: 1   MDCKKFIQLVEEKKKRALEKKEAPLKWEQKLEAASKAQAEAEAKERKLKAARHKRRSVSE 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDE 120
           SD+D++SDS + GRK  KR HKKHR+H HSDSG++EKRK+++S+R+ KRH SS DD+SDE
Sbjct: 61  SDSDSDSDSSDEGRKTTKRAHKKHRKHGHSDSGENEKRKEKKSRRRRKRHSSS-DDNSDE 120

Query: 121 FDGHSDEGR-RKKRNHRRHAHDNSSSDESY--SSSSDDDVETRKRCRSRHNRHHRHIGYS 180
              +S+E R RKKR  R+H H +S SD S   SSS++DD   R++ RS+H + HR    S
Sbjct: 121 MKSNSEEDRKRKKRVQRKHKHRDSRSDSSASDSSSNEDDGAIRRKSRSKHQKRHRR-SES 180

Query: 181 SSDDSSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSA 240
            + DSSS+ +N   KR  H +  + HR                RS++S     +  ED  
Sbjct: 181 GASDSSSDEDNVASKRSHHVKRHKRHR----------------RSESSSTSDSSSDEDGV 240

Query: 241 LQYRHKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHG 278
            + R+ + H   HR  HS       +D +    +SDG  HG
Sbjct: 241 TRRRNHAKHHKHHRRSHS-------VDSK----SSDGGAHG 252

[Close]

BLAST of CmoCh04G015440 vs. NCBI nr
Match: gi|720086164|ref|XP_010243755.1| (PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Nelumbo nucifera])

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43
Identity = 145/286 (50.70%), Postives = 194/286 (67.83%), Query Frame = 1


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MD+KKF+QLVEEKK+RALEKKEAPLKWEQ+LEAAAKA+A AEAK RK+KAAKHKR+SVS 
Sbjct: 1   MDSKKFMQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKERKIKAAKHKRKSVST 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDS-GDSEKRKDRRSKRKLKRHQSSHDDSSD 120
           SD D++S+S++ GRK  KR+HKKHR+ SHSDS GD+EK+++++SKR+ K+H SS  D S 
Sbjct: 61  SDDDSDSESNDSGRKRAKRSHKKHRKQSHSDSSGDNEKKREKKSKRRPKKHSSSSSDESS 120

Query: 121 EFDGHSD---EGRRKKRNHR-RHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIG 180
             + +SD   + RRKKR H+ RH    S SD S S SS D  E     R  H RHH+H  
Sbjct: 121 GNEYYSDSEEDQRRKKRAHKKRHRRHVSDSDSSASDSSSD--ENGALARKNHTRHHKHHR 180

Query: 181 YSSSDDSSSENNNRREKRGRHRQHEQSHRSCSIDSLDCN--HWRCDARSQASGRLSDADR 240
            +  D +SS++++ R +  RH  H++ HRS + +S D +  + R + RSQ+ G+ SD + 
Sbjct: 181 KTVHDSTSSDSDDNRRQHARH--HKRHHRSSADESTDSDSDYHRDEGRSQSLGKSSDDNH 240

Query: 241 EDSALQYRHKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGR 279
           E+S  Q RHK  H ++H HHH       +     ADNN  GN+  R
Sbjct: 241 EESGKQKRHKKCH-HRHGHHHHRRHHHHKPHHAAADNN--GNHEHR 279

[Close]

BLAST of CmoCh04G015440 vs. NCBI nr
Match: gi|747041962|ref|XP_011075949.1| (PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Sesamum indicum])

HSP 1 Score: 176.8 bits (447), Expect = 5.4e-41
Identity = 137/284 (48.24%), Postives = 181/284 (63.73%), Query Frame = 1


Query: 1   MDTKKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSD 60
           MD KKF+QLVEEKK+R L KKEAPLKWEQ+LEAAAKA+A AEAK RK K A+HKRRSVS 
Sbjct: 1   MDAKKFMQLVEEKKKRVLAKKEAPLKWEQKLEAAAKAKADAEAKERKAKVARHKRRSVSV 60

Query: 61  SDTDTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDE 120
           +D+D+ +DSH+ GRK  K++HK+ R+HSHSD GD EKRKDR+SK+K KR  S  DDSSDE
Sbjct: 61  TDSDSGTDSHDEGRKRAKKSHKR-RKHSHSDGGDHEKRKDRKSKQKPKRRSSGSDDSSDE 120

Query: 121 FDGHSDEGRRKKRNHRRHAH-DNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSS 180
           +D   +E +RKKR+H++H H   S S  S SSS ++D   R+R  ++H++HHR    S S
Sbjct: 121 YDTDLEEEKRKKRSHKKHRHASKSDSSASDSSSDENDDAIRRRNHAKHHKHHRRSHSSHS 180

Query: 181 DDSSSENNNRREKRGRHRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSALQ 240
           D S  E ++R++ R +HR+H +                   RS +S   S +D ED+  +
Sbjct: 181 DSSGDEYDDRKKSRPKHRKHHK-------------------RSDSSSSESSSD-EDAVRK 240

Query: 241 YRHKSSHPNKHRHHHSGAGGLTQIDEEHADNNSDGNNHGRAKDS 283
            RH     +KHR HH       +    H  ++SDG  H R   S
Sbjct: 241 KRH-----SKHRKHH-------RRSYSHDTSDSDGYKHHRRSRS 251

The following BLAST results are available for this feature:

BLAST of CmoCh04G015440 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G015440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWI8_CUCSA	8.8e-67	62.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611620 PE=4 SV=1	[more]
A0A067KT15_JATCU	2.4e-40	48.99	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09277 PE=4 SV=1	[more]
M5XXI2_PRUPE	7.1e-40	48.59	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008721mg PE=4 SV=1	[more]
A0A059D7I4_EUCGR	1.1e-37	46.69	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02880 PE=4 SV=1	[more]
A0A142CD07_9LAMI	1.9e-37	47.29	At5g03900-like protein OS=Catalpa bungei PE=2 SV=1	[more]

BLAST of CmoCh04G015440 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01100.1	1.6e-27	40.00	unknown protein	[more]

BLAST of CmoCh04G015440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091690\|ref\|XP_008446680.1\|	2.6e-67	61.87	PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Cucumi...	[more]
gi\|449434564\|ref\|XP_004135066.1\|	1.3e-66	62.00	PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Cucumi...	[more]
gi\|225424146\|ref\|XP_002283977.1\|	1.2e-43	50.53	PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Vitis ...	[more]
gi\|720086164\|ref\|XP_010243755.1\|	1.5e-43	50.70	PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Nelumb...	[more]
gi\|747041962\|ref\|XP_011075949.1\|	5.4e-41	48.24	PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Sesamu...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G015440.1	CmoCh04G015440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 30..50 scor
None	No IPR available	PANTHER	PTHR37715	FAMILY NOT NAMED	coord: 2..254 score: 1.1
None	No IPR available	PANTHER	PTHR37715:SF1	SUBFAMILY NOT NAMED	coord: 2..254 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G015440	CmaCh04G014710	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G015440	Cla020438	Watermelon (97103) v1	cmowmB693
CmoCh04G015440	Lsi04G002030	Bottle gourd (USVL1VR-Ls)	cmolsiB660
CmoCh04G015440	Cp4.1LG01g14060	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G015440	Cp4.1LG09g03420	Cucurbita pepo (Zucchini)	cmocpeB651
CmoCh04G015440	CsaV3_5G034830	Cucumber (Chinese Long) v3	cmocucB0874
CmoCh04G015440	Cla97C05G104070	Watermelon (97103) v2	cmowmbB729
CmoCh04G015440	Bhi07G001047	Wax gourd	cmowgoB0892
CmoCh04G015440	Carg19030	Silver-seed gourd	carcmoB1412
CmoCh04G015440	Carg01869	Silver-seed gourd	carcmoB1138

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G015440	CmoCh18G009900	Cucurbita moschata (Rifu)	cmocmoB336

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G015440	Cucurbita pepo (Zucchini)	cmocpeB659
CmoCh04G015440	Bottle gourd (USVL1VR-Ls)	cmolsiB617
CmoCh04G015440	Cucumber (Gy14) v2	cgybcmoB643
CmoCh04G015440	Cucumber (Gy14) v2	cgybcmoB650
CmoCh04G015440	Melon (DHL92) v3.6.1	cmomedB708
CmoCh04G015440	Melon (DHL92) v3.6.1	cmomedB720
CmoCh04G015440	Cucumber (Chinese Long) v3	cmocucB0863
CmoCh04G015440	Watermelon (97103) v2	cmowmbB683
CmoCh04G015440	Wax gourd	cmowgoB0830
CmoCh04G015440	Cucurbita moschata (Rifu)	cmocmoB265
CmoCh04G015440	Cucurbita moschata (Rifu)	cmocmoB469
CmoCh04G015440	Cucumber (Gy14) v1	cgycmoB0776
CmoCh04G015440	Cucumber (Gy14) v1	cgycmoB0793
CmoCh04G015440	Cucurbita maxima (Rimu)	cmacmoB312
CmoCh04G015440	Cucurbita maxima (Rimu)	cmacmoB420
CmoCh04G015440	Cucurbita maxima (Rimu)	cmacmoB743
CmoCh04G015440	Wild cucumber (PI 183967)	cmocpiB737
CmoCh04G015440	Wild cucumber (PI 183967)	cmocpiB745
CmoCh04G015440	Cucumber (Chinese Long) v2	cmocuB738
CmoCh04G015440	Cucumber (Chinese Long) v2	cmocuB729
CmoCh04G015440	Melon (DHL92) v3.5.1	cmomeB620
CmoCh04G015440	Melon (DHL92) v3.5.1	cmomeB631
CmoCh04G015440	Watermelon (Charleston Gray)	cmowcgB642
CmoCh04G015440	Watermelon (Charleston Gray)	cmowcgB654
CmoCh04G015440	Watermelon (97103) v1	cmowmB712