Carg19030 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACACCAAGAAATTCTTCCAATTGGTTGAGGAGAAGAAGAAGAGAGCTTTGGAGAAGAAGGAAGCTCCATTGAAATGGGAACAAAAACTTGAAGCTGCTGCCAAGGCAAAGGCTGATCATGAGGGAGGCCGGAGAGCAGGTAAGAGAATTCATAAGAAGCACAGGAAACATAGCCACTCTGATTCAGGTGACTATGAGAAGATGAAGGATAGAAAATCCAAGAGAAAACCAAAACGTCGTCGCTCGTCTAATGATGTCAGCAGTGATGAATTTGGTGACCACTCTGAAGAAGATAGGAGGAAGAAGAGAAACCATAGAAGACATATTCATGATGATTCAAGTTCCGATGAAAGTTACTCCGGTTCTTCTAACGATGATATTGAGACAACTAAAAGAAGTCACTCCCGGCGTCACAAACATCATAGGCGACCTAACTATTCATCATCTGACGATTCTAGCAGTGAGGATGATACTAGTTTGCGAAGGAAAAGGCATGTGAGGCACCACAGGCCCCACCATCGACACGGGCAATCCCATCGATCGTGTAGTATCGATTCTTTAGATTGTAATTATGGCAGGCATGAGGCTAGAAGCCAGTCTTCAGGGAAGTCATCTGATGATAATCATGAAGAAGAATCAGCACTACAATCTCGGCACAAGAGAGAGAATCACCATCACAAACATCGGCACCACCATCATTCAGGTGAGAACAAGCATTCATTCAATGGGTCGACCGAGATCAATGAAAAATATAACGACGATGACCCTGATGGAAACAACCACGATCGTTCCAAGAATCCTCATTAA ATGGACACCAAGAAATTCTTCCAATTGGTTGAGGAGAAGAAGAAGAGAGCTTTGGAGAAGAAGGAAGCTCCATTGAAATGGGAACAAAAACTTGAAGCTGCTGCCAAGGCAAAGGCTGATCATGAGGGAGGCCGGAGAGCAGGTAAGAGAATTCATAAGAAGCACAGGAAACATAGCCACTCTGATTCAGGTGACTATGAGAAGATGAAGGATAGAAAATCCAAGAGAAAACCAAAACGTCGTCGCTCGTCTAATGATGTCAGCAGTGATGAATTTGGTGACCACTCTGAAGAAGATAGGAGGAAGAAGAGAAACCATAGAAGACATATTCATGATGATTCAAGTTCCGATGAAAGTTACTCCGGTTCTTCTAACGATGATATTGAGACAACTAAAAGAAGTCACTCCCGGCGTCACAAACATCATAGGCGACCTAACTATTCATCATCTGACGATTCTAGCAGTGAGGATGATACTAGTTTGCGAAGGAAAAGGCATGTGAGGCACCACAGGCCCCACCATCGACACGGGCAATCCCATCGATCGTGTAGTATCGATTCTTTAGATTGTAATTATGGCAGGCATGAGGCTAGAAGCCAGTCTTCAGGGAAGTCATCTGATGATAATCATGAAGAAGAATCAGCACTACAATCTCGGCACAAGAGAGAGAATCACCATCACAAACATCGGCACCACCATCATTCAGGTGAGAACAAGCATTCATTCAATGGGTCGACCGAGATCAATGAAAAATATAACGACGATGACCCTGATGGAAACAACCACGATCGTTCCAAGAATCCTCATTAA ATGGACACCAAGAAATTCTTCCAATTGGTTGAGGAGAAGAAGAAGAGAGCTTTGGAGAAGAAGGAAGCTCCATTGAAATGGGAACAAAAACTTGAAGCTGCTGCCAAGGCAAAGGCTGATCATGAGGGAGGCCGGAGAGCAGGTAAGAGAATTCATAAGAAGCACAGGAAACATAGCCACTCTGATTCAGGTGACTATGAGAAGATGAAGGATAGAAAATCCAAGAGAAAACCAAAACGTCGTCGCTCGTCTAATGATGTCAGCAGTGATGAATTTGGTGACCACTCTGAAGAAGATAGGAGGAAGAAGAGAAACCATAGAAGACATATTCATGATGATTCAAGTTCCGATGAAAGTTACTCCGGTTCTTCTAACGATGATATTGAGACAACTAAAAGAAGTCACTCCCGGCGTCACAAACATCATAGGCGACCTAACTATTCATCATCTGACGATTCTAGCAGTGAGGATGATACTAGTTTGCGAAGGAAAAGGCATGTGAGGCACCACAGGCCCCACCATCGACACGGGCAATCCCATCGATCGTGTAGTATCGATTCTTTAGATTGTAATTATGGCAGGCATGAGGCTAGAAGCCAGTCTTCAGGGAAGTCATCTGATGATAATCATGAAGAAGAATCAGCACTACAATCTCGGCACAAGAGAGAGAATCACCATCACAAACATCGGCACCACCATCATTCAGGTGAGAACAAGCATTCATTCAATGGGTCGACCGAGATCAATGAAAAATATAACGACGATGACCCTGATGGAAACAACCACGATCGTTCCAAGAATCCTCATTAA MDTKKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADHEGGRRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDEFGDHSEEDRRKKRNHRRHIHDDSSSDESYSGSSNDDIETTKRSHSRRHKHHRRPNYSSSDDSSSEDDTSLRRKRHVRHHRPHHRHGQSHRSCSIDSLDCNYGRHEARSQSSGKSSDDNHEEESALQSRHKRENHHHKHRHHHHSGENKHSFNGSTEINEKYNDDDPDGNNHDRSKNPH
BLAST of Carg19030 vs. NCBI nr
Match: XP_022945808.1 (uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita moschata] >XP_022945809.1 uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita moschata] >XP_022945810.1 uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita moschata] >XP_022945811.1 uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita moschata]) HSP 1 Score: 187.6 bits (475), Expect = 5.6e-44 Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
BLAST of Carg19030 vs. NCBI nr
Match: XP_022968658.1 (uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita maxima] >XP_022968659.1 uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita maxima]) HSP 1 Score: 180.3 bits (456), Expect = 9.0e-42 Identity = 265/269 (98.51%), Postives = 268/269 (99.63%), Query Frame = 0
BLAST of Carg19030 vs. NCBI nr
Match: XP_023541098.1 (uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita pepo subsp. pepo] >XP_023541099.1 uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 174.1 bits (440), Expect = 6.4e-40 Identity = 260/269 (96.65%), Postives = 261/269 (97.03%), Query Frame = 0
BLAST of Carg19030 vs. NCBI nr
Match: XP_022775917.1 (transcriptional regulator ATRX homolog [Durio zibethinus] >XP_022775918.1 transcriptional regulator ATRX homolog [Durio zibethinus]) HSP 1 Score: 68.2 bits (165), Expect = 5.0e-08 Identity = 40/54 (74.07%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of Carg19030 vs. NCBI nr
Match: KMZ67902.1 (hypothetical protein ZOSMA_252G00030 [Zostera marina]) HSP 1 Score: 66.6 bits (161), Expect = 1.4e-07 Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0
BLAST of Carg19030 vs. TAIR10
Match: AT2G01100.1 (unknown protein) HSP 1 Score: 53.5 bits (127), Expect = 2.3e-07 Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Carg19030 vs. TrEMBL
Match: tr|A0A0K9PI24|A0A0K9PI24_ZOSMR (Uncharacterized protein OS=Zostera marina OX=29655 GN=ZOSMA_252G00030 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 9.6e-08 Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0
BLAST of Carg19030 vs. TrEMBL
Match: tr|A0A0V0I2Y1|A0A0V0I2Y1_SOLCH (Putative sarcoplasmic reticulum histidine-rich calcium-binding protein-like OS=Solanum chacoense OX=4108 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 8.1e-07 Identity = 36/54 (66.67%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of Carg19030 vs. TrEMBL
Match: tr|Q38M44|Q38M44_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 8.1e-07 Identity = 36/54 (66.67%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of Carg19030 vs. TrEMBL
Match: tr|A0A1J6JYT2|A0A1J6JYT2_NICAT (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_33809 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06 Identity = 38/54 (70.37%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of Carg19030 vs. TrEMBL
Match: tr|A0A1S2Y0U4|A0A1S2Y0U4_CICAR (G patch domain-containing protein TGH homolog OS=Cicer arietinum OX=3827 GN=LOC101498734 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 4.0e-06 Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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