CmaCh18G009820 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATGCAAATATATTGAAGAGACTTATCTCTGAGGTAATATGATGCAGAATGTTCAGTTTTTTGTACCTAAAAAATGACTACTAGATAGTAGATATTACCTTAATGAACGTGCGCGACATGAACGTTCAATATATTCATTACTAGTTTGTAGAGTTGGTAACTTTAGATCACTCTTCGTAGCGTTTGCATTCTAAAATATACATATCCAATTCCACTCATCTATTTTTTTAAGATTAAATTTTCGAACATTATAGATTAAACATATATTTAGTCTATTTTTCTTGTCAATAAAAGTTTAATAAATTATATATTTGTTTTCATATAGCCTTGTAACACTAAGAATTTGATTTGATTTGATTTATTGACTGTTTTATAATGAATTAATATTTTAGTGATAACACATGTTTGTTTAACCTATAACTTATTCATCAAATTATCTCGTTAATAATTAGAAATTAAATTAGTTTAGGGTGATTTGATTGACGTGCAAGTCTTTCGTCTATGTATCGACTATCGGGCCCATAACAACACTAAAAATCAAAAAAGAGCCCGCGGCGGAAAGACACAAGTCGTCCATCTCGACGTGATATATGAATTGTTCAGTAGTGCTTCGCCCCAGCGGGAGGTCCGCACAACAGGCTATTAGCTCAATGGCCCGCCTCGATTCTATTCGTATATATTATCAAGTCTTCACGTTACGTTTACCCTTCGCCATTAAATAAAATTTTAAGGGTCTTTAGCCTAAAAATATTTTTGTAAATAATATATTGAGTAGAATTTAACAATTTAAAAAGCTTGAAATAATTAATTATCAGTTATTAGAATGAAATTTGATTAAAATTTAATTTAGGGAGGCGGAGGAAAGGAAAAGGAAAGAGAAGAGCACGTGGTGAACGGTGGCGGCAGAGAACGCGTAGAGCATGAACGTCTTTTCTGTCTATAAAAAGGGCCCTTTGCTCCCCAATTCGGTCATCCACCGGGCGTTTCTGGAAAGGTGAACTTGAGTCGACGCGAAGTCAAACAGAACCCTAACCATCTCCTTCTTCGTTATTCGATCTTCCGATTTCTCTTGCAATCTTGTTTCCCCTCTCCTTCAGGATCAGGTACGGTTCCAATTCCTAATTATGTCCCTTGCTCATCATGTCTAGCGATGGTTTTCTGTTCTTCGTCTTTTTCCGTTTTAGATAGATCTGAGTTTTATGGATGGTTGATTCTGTTGCTTGATGCGTTTATAAACTTGCGAGTAATCTTGTGGTATGGATCGCGTGTTGATGTTTTTCTTTTTCTAGTTTAGAGTTATTCTGAACAAAACCTCTTTTGCCAAGGGTTTTGGGTCCTTTGTTTTTGGGGTTTTACGTGAATTGTGCTGCTTATGTTCTTAATGTACGTGTTTTGGCGCTAATACGTTTGTGGCTGACAAGTTGAAGTTGATCAAAACCAAGATTGGAAACATCGTAGAAGAATTTTCTTAGTTTTGCAATTATCGCCACGGAACTTACCTTTTTCTGATGAATGTATGTTGGTAAATTCTTGTTAGAACAATTGAGATTAAATTATATGATGTTTTGGGTATCAACTGGGTCTTGTTTCAACTTAGCTAGGTATATGAATGATCATAGTGGTTGGTGTCTTATGTCAAATTGGCTAGCTGAATGGTTGGTCTCTATGTCAAGTTGCATTGGTTATTATGTGCTTCAGCTACTTGAATCATTTTCTGCTCGGCATGTTATATGTATTTTTGTAACGGCCTAAGTCTACCGCCAGCGGATATTGTCCTCTTTAAGCTTTCCTTTTGGGCTTCCTCTCAAGTTTTTTAAAATCCTTCTGTTAGGGAGAGGTTTCCACACTATTATAAAGGGTGTTTCGTTCTCCTCCCCTAACTGACGTGGGATCTCACAATCTACCCCTTTTGGGGCCAGCGTCCTCGTTGGCACTCATTCCCCTCTTCAATCGATGTGGGAGCGCTCAATCCACCCCCCTTCGGCTCTGCCTCTTGTCAACCCCCTTCGGGATTCAGCTTTCTCGCTGGCACATCGCCTAGTGTTCGGCTCTAATACCATTTGTAACGGTCCAAGTCCACTACTAGTAGATATTGTTCTCCTTGGGCTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACGCGTCTATTAGGGAGAGGTTTTCACCCCTTATAAATGATGTTTTGTTCTCTTCTCCGACAGATGTGAGATGTCACAATTTTTTTGTACGAGAAAGTAGCATCCTACGTTATCTTTTGTGTTTGTTGAAATTGGATATAATTGCAATATAGCAGAGATGTTATTGAAGTGCATATTTTGATGGGAAGAACTAACATTGTTTTTTCTCTTCTGTGAGATGCACTTCCGGCCATTGTCATACCAAAATGCAGGTATTGAGCTGGTTTTTGTATCTGAATGGACACCAAGAAATTCTTCCAATTGGTTGAGGAGAAGAAGAAGAGAGCTTTGGAGAAGAAGGAAGCTCCATTGAAATGGGAACAAAAACTTGAAGCTGCGGCCAAGGCAAAGGCTGATCATGAGGGAGGACGGAGAGCAGGTAAGCGAATTCATAGGAAGCACAGGAAACATAGCCACTCTGATTCAGGTGACTATGAGAAGATGAAGGATAGAAAATCCAAGAGAAAACCGAAACGTCGTCGCTCGTCTAATGATGTCAGCAGCGATGAAATTGGTGGCCACTCTGAAGAAGATAGGAGGAAGAAGAGAAACCATAGAAGACATATTCATGATGATTCAAGTTCCGATGAAAGTTACTCCGGTTCTTCTAACGATGATATTGAGACAACTAAAAGAAGTCACTCCCGGCGTCACAAACATCATAGGCGACCTAACTATTCATCATCTGACGATTCTAGCAGTGAGGATGATACTAGTTTGCGAAGGAAAAGGCATGTAAGGCACCACAGGCCCCACCATCGACACGGGCAATCCCATCGATCGTGTAGTATCGATTCTTTAGATTGTAATTATGGCAGGCATGAGGCTAGAAGCCAGTCTTCAGGGAAGTCATCTGACGATAATCATGAAGAAGAATCAGCACTACAATCTCGGCACAAGAGAGAAAATCACCATCACAAACATCGGCACCACCATCATTCAGGTGAGAACAAGCATTCATTCAATGGGTCGACCAAGATAGATGAAAAATATAACGACGATGACCCTGATGGAAACAACCACGATCGTTCCAAGAATCCTCATTAA ATGTATGCAAATATATTGAAGAGACTTATCTCTGAGGGAGGCGGAGGAAAGGAAAAGGAAAGAGAAGAGCACGTGGTGAACGGTGGCGGCAGAGAACGCGTAGAGCATGAACGGCCCTTTGCTCCCCAATTCGGTCATCCACCGGGCGTTTCTGGAAAGGTGAACTTGAGTCGACGCGAAGTCAAACAGAACCCTAACCATCTCCTTCTTCGTTATTCGATCTTCCGATTTCTCTTGCAATCTTGTTTCCCCTCTCCTTCAGGATCAGATAGATCTGAGTTTTATGGATGGTTGATTCTGTTGCTTGATGCGTTTATAAACTTGCGAAAATTCTTCCAATTGGTTGAGGAGAAGAAGAAGAGAGCTTTGGAGAAGAAGGAAGCTCCATTGAAATGGGAACAAAAACTTGAAGCTGCGGCCAAGGCAAAGGCTGATCATGAGGGAGGACGGAGAGCAGGTAAGCGAATTCATAGGAAGCACAGGAAACATAGCCACTCTGATTCAGGTGACTATGAGAAGATGAAGGATAGAAAATCCAAGAGAAAACCGAAACGTCGTCGCTCGTCTAATGATGTCAGCAGCGATGAAATTGGTGGCCACTCTGAAGAAGATAGGAGGAAGAAGAGAAACCATAGAAGACATATTCATGATGATTCAAGTTCCGATGAAAGTTACTCCGGTTCTTCTAACGATGATATTGAGACAACTAAAAGAAGTCACTCCCGGCGTCACAAACATCATAGGCGACCTAACTATTCATCATCTGACGATTCTAGCAGTGAGGATGATACTAGTTTGCGAAGGAAAAGGCATGTAAGGCACCACAGGCCCCACCATCGACACGGGCAATCCCATCGATCGTGTAGTATCGATTCTTTAGATTGTAATTATGGCAGGCATGAGGCTAGAAGCCAGTCTTCAGGGAAGTCATCTGACGATAATCATGAAGAAGAATCAGCACTACAATCTCGGCACAAGAGAGAAAATCACCATCACAAACATCGGCACCACCATCATTCAGGTGAGAACAAGCATTCATTCAATGGGTCGACCAAGATAGATGAAAAATATAACGACGATGACCCTGATGGAAACAACCACGATCGTTCCAAGAATCCTCATTAA ATGTATGCAAATATATTGAAGAGACTTATCTCTGAGGGAGGCGGAGGAAAGGAAAAGGAAAGAGAAGAGCACGTGGTGAACGGTGGCGGCAGAGAACGCGTAGAGCATGAACGGCCCTTTGCTCCCCAATTCGGTCATCCACCGGGCGTTTCTGGAAAGGTGAACTTGAGTCGACGCGAAGTCAAACAGAACCCTAACCATCTCCTTCTTCGTTATTCGATCTTCCGATTTCTCTTGCAATCTTGTTTCCCCTCTCCTTCAGGATCAGATAGATCTGAGTTTTATGGATGGTTGATTCTGTTGCTTGATGCGTTTATAAACTTGCGAAAATTCTTCCAATTGGTTGAGGAGAAGAAGAAGAGAGCTTTGGAGAAGAAGGAAGCTCCATTGAAATGGGAACAAAAACTTGAAGCTGCGGCCAAGGCAAAGGCTGATCATGAGGGAGGACGGAGAGCAGGTAAGCGAATTCATAGGAAGCACAGGAAACATAGCCACTCTGATTCAGGTGACTATGAGAAGATGAAGGATAGAAAATCCAAGAGAAAACCGAAACGTCGTCGCTCGTCTAATGATGTCAGCAGCGATGAAATTGGTGGCCACTCTGAAGAAGATAGGAGGAAGAAGAGAAACCATAGAAGACATATTCATGATGATTCAAGTTCCGATGAAAGTTACTCCGGTTCTTCTAACGATGATATTGAGACAACTAAAAGAAGTCACTCCCGGCGTCACAAACATCATAGGCGACCTAACTATTCATCATCTGACGATTCTAGCAGTGAGGATGATACTAGTTTGCGAAGGAAAAGGCATGTAAGGCACCACAGGCCCCACCATCGACACGGGCAATCCCATCGATCGTGTAGTATCGATTCTTTAGATTGTAATTATGGCAGGCATGAGGCTAGAAGCCAGTCTTCAGGGAAGTCATCTGACGATAATCATGAAGAAGAATCAGCACTACAATCTCGGCACAAGAGAGAAAATCACCATCACAAACATCGGCACCACCATCATTCAGGTGAGAACAAGCATTCATTCAATGGGTCGACCAAGATAGATGAAAAATATAACGACGATGACCCTGATGGAAACAACCACGATCGTTCCAAGAATCCTCATTAA MYANILKRLISEGGGGKEKEREEHVVNGGGRERVEHERPFAPQFGHPPGVSGKVNLSRREVKQNPNHLLLRYSIFRFLLQSCFPSPSGSDRSEFYGWLILLLDAFINLRKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADHEGGRRAGKRIHRKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDEIGGHSEEDRRKKRNHRRHIHDDSSSDESYSGSSNDDIETTKRSHSRRHKHHRRPNYSSSDDSSSEDDTSLRRKRHVRHHRPHHRHGQSHRSCSIDSLDCNYGRHEARSQSSGKSSDDNHEEESALQSRHKRENHHHKHRHHHHSGENKHSFNGSTKIDEKYNDDDPDGNNHDRSKNPH
BLAST of CmaCh18G009820 vs. TrEMBL
Match: A0A0A0KWI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611620 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.3e-52 Identity = 161/307 (52.44%), Postives = 200/307 (65.15%), Query Frame = 1
BLAST of CmaCh18G009820 vs. TrEMBL
Match: B9HJ82_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s12570g PE=4 SV=2) HSP 1 Score: 148.3 bits (373), Expect = 1.9e-32 Identity = 134/316 (42.41%), Postives = 176/316 (55.70%), Query Frame = 1
BLAST of CmaCh18G009820 vs. TrEMBL
Match: M5XXI2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008721mg PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.5e-32 Identity = 138/328 (42.07%), Postives = 170/328 (51.83%), Query Frame = 1
BLAST of CmaCh18G009820 vs. TrEMBL
Match: B9T1V6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0275200 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.6e-31 Identity = 126/292 (43.15%), Postives = 161/292 (55.14%), Query Frame = 1
BLAST of CmaCh18G009820 vs. TrEMBL
Match: A0A067FNK8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040704mg PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.1e-31 Identity = 137/322 (42.55%), Postives = 182/322 (56.52%), Query Frame = 1
BLAST of CmaCh18G009820 vs. TAIR10
Match: AT2G01100.1 (AT2G01100.1 unknown protein) HSP 1 Score: 89.0 bits (219), Expect = 6.9e-18 Identity = 94/257 (36.58%), Postives = 129/257 (50.19%), Query Frame = 1
BLAST of CmaCh18G009820 vs. NCBI nr
Match: gi|659091690|ref|XP_008446680.1| (PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Cucumis melo]) HSP 1 Score: 217.2 bits (552), Expect = 4.7e-53 Identity = 164/308 (53.25%), Postives = 201/308 (65.26%), Query Frame = 1
BLAST of CmaCh18G009820 vs. NCBI nr
Match: gi|449434564|ref|XP_004135066.1| (PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Cucumis sativus]) HSP 1 Score: 215.3 bits (547), Expect = 1.8e-52 Identity = 161/307 (52.44%), Postives = 200/307 (65.15%), Query Frame = 1
BLAST of CmaCh18G009820 vs. NCBI nr
Match: gi|720086164|ref|XP_010243755.1| (PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Nelumbo nucifera]) HSP 1 Score: 158.7 bits (400), Expect = 2.0e-35 Identity = 146/309 (47.25%), Postives = 181/309 (58.58%), Query Frame = 1
BLAST of CmaCh18G009820 vs. NCBI nr
Match: gi|502120552|ref|XP_004497000.1| (PREDICTED: G patch domain-containing protein TGH homolog [Cicer arietinum]) HSP 1 Score: 153.3 bits (386), Expect = 8.4e-34 Identity = 136/331 (41.09%), Postives = 176/331 (53.17%), Query Frame = 1
BLAST of CmaCh18G009820 vs. NCBI nr
Match: gi|566183628|ref|XP_002312425.2| (hypothetical protein POPTR_0008s12570g [Populus trichocarpa]) HSP 1 Score: 148.3 bits (373), Expect = 2.7e-32 Identity = 134/316 (42.41%), Postives = 176/316 (55.70%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |