Cp4.1LG08g07230 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG08g07230
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBnaA08g08150D protein
LocationCp4.1LG08 : 5632887 .. 5635580 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAGTTTAAACGTAAAGCATTTTCTCGTGGCCTGCGACTCGGGATTCGGTCATCGGCTCGCATTCTCTCTCGTAGCTCAAACATTTGAGGTTTCTGTCTTCCCTTCGCCTTGATTTTTCCGGCAATTGGAAAACGAAGAAGATGAAGAGATCGGTGAGTGCTTCCAGAGTCTCCGATAAGGTGTTATTGAGTTCGCCGTCGTCGTCGTCGTCGTCGTCGTCGCAATCCGCAGTCTTTAGATCTTCGAGTGTGAGTTCCGGCTTGGACTCAGAGCTTTACCTACCGACGTACAATCCGTTCTCTCACGCGGCTGAAAAAGAACGTCGCCGTCTTAAGCTTGCCAAGATCTTCATCCACTTCATTCCCGTCGTCGTTGTCTTCTGCGCCGTCGTTCTCTGGTTCTTCTCTGATCCAGGTACTGAAATTACTAGAGTGAAAGATTCTCGTAGATCAAGATCGACTATTTGATATTAAAGACGGCGAGGAATTAAGAAATATAATATTTTCCCCAAAGTTATTGCTGCCCGTCCTGTAATATATCGTTAGGGATTGCAATGGATTATCGATTAACACGAGCAATCAGAGTGCTTAAAATCAATGGCCTTATTGTCGTCCTTGTCTCCATTTATGCGGCTTGTTGTTTTGATATTGGAAATGGTTGGGTGTTGAACAGAAGGAACGGGGATTGTTGGGGAAGTTGTTGTGATGGCTTATGGAAAACCGTTGAAGGACTTTAGAATAAGGATTTATCAGTATAAATTAAAGATTAGTCACCGTCCTAGCGTAGTACTTGTGAAGTTTGGAGTTGGAATCAATTGAGCATGTTGTCTCTATGTAGCTAAGAAATTTTCGAATGATAGTGTGTGCATATAAACTTTGGATTGCAGAGCTTTCCTGTGAATGCATTGCTCTCTAATATCATGTCGTTAACTTGGTATCTCTTAAACTTAAATGATCGGATATTGTATGATGCAAGTAAAAGGATACATGAATTGAGTATTCCCTGGTTAACAGTTACTATTCTTCTGTTGTTCAAGTAGAATTTCATTGTATAATTTAAAGCTAAATGATAAAGGTAATGTGATTATCGGGACTGTAAACTGTTTAGCTTCTGCCATTTATTTGTTGGGGTTTCTGAGCTTGCTCAATGCAGTCAATGATCCGCTTGTTGAGTTTATTCAAATATTCATAATGTTTTACTCCATCAAGATGGTAGATGCGTGCATGTTCTGTTTGTGTAGATTTTATATATTCTACTACTTGTGACCTTAGTGATAGTATAATTAAGAAGCCTTGTACTGGTCTCACTTTTCATTATCAAATTAGTGAATGTAAAAATCTAAACCTCCTGTATTCATCTAGGAACAGCAGTTTGAGTCTTAGCTAATTAAAAATGCTTAAAGGGTCTTAGAACTCGAGTAGACAGTCACTACTTTAGATAGCATCTTATTGGGCAGGAACAACAGTTTGAGACTTAGCTAATTAAAAATGCTTAAAGGGTATTAGAACTCGAGTAGACAAACACTACTTTAGATAGCATCATATTGGGTTATGGAGTCTGCTGCTTATCTATAGCTTATTTAATTGTTATACCTACTAAAACTATATATGGAAAATGGTCATATATAGTAAATGACTCTTTGTTGAAAAAAAATGAGATATATATAGTAGAGGGTTATTTTCATGTCAATTTTCCTACTTGCATTTTCTCTCTCTTGTTTGTGTTCATTGGAGTCATAAACCTTTAATCAATATTTCTCCTTACATTTTCTTTGTCCTGTTCATCTAGATCGAGTGTGTGCGTTGTCGTATGATACTAACCCATCATTCTATTTTAGAATTGTTTTCCTCCTTAGCTAGCATGCCAGCTAGTAAAGTCACCCTTTTATGAGATGTTCTTAGGATTTAGATAAGTCTTTATGTGGCATAGTAAGAACTAAGAGGACACTCGAAGAGCACATTCGTTTTCTTCTCTGACTTGAGTGGTGGTTCTATTACAAGGAAAATAAGTGGGAATGTCATAGTAAGTTTACATGGATATGTTCATGAACCGTTGAAAAACCATGAATTTAGGTGTTCAATATGAAGCATCAAAGTCATTAGCAGTGTTTGTTACTTTCAGGATTGTTTATGGTCTATGAATCTATCTTCTGTGTAGGTCAACAAATATAGACAGAGCTGTTTCTTCGGAGACCTTACTGGAATGGTCAGCTACTTGAAGCAAAGTATGTGATCTTGATGAATGGTATACTGAACAAGAGGACAATAAAGCCTATGCTCAGTAAGTATGCAGGCATAAGATGTCACTTTAAAATAGTCTCCATTAGTGACCTTTCTTTTGAATGATAGGCTTACTTTGCTTCTATTACTTATGTTAAAACGAACATCTCATCATGTCGGTTTGTTATCCTCGTGTGACTAACCATTAAAACCGTAGTTTACTCGATAATTGTACAGCTATGAAACTGATGTTAGTATGTGTTCAATGAGAGAGAGAGGAGTGATTTCAAGTGTATATTCTTGGCCTCTGTTCTTTGATCAGGGAAATTGGTTGTGGTTGCATTGTGGATGTAGAATCTCACTTGAACTCTCATGTCTTCTTCCTTGGATCCTTGATCTTTCTTTTACCAGACTAGATTGGATTGTTTGTTCTTAAAACTGGGTGTCTTCCAGCTCCAGGGCAACCCAGGTAT

mRNA sequence

TGAAGTTTAAACGTAAAGCATTTTCTCGTGGCCTGCGACTCGGGATTCGGTCATCGGCTCGCATTCTCTCTCGTAGCTCAAACATTTGAGGTTTCTGTCTTCCCTTCGCCTTGATTTTTCCGGCAATTGGAAAACGAAGAAGATGAAGAGATCGGTGAGTGCTTCCAGAGTCTCCGATAAGGTGTTATTGAGTTCGCCGTCGTCGTCGTCGTCGTCGTCGTCGCAATCCGCAGTCTTTAGATCTTCGAGTGTGAGTTCCGGCTTGGACTCAGAGCTTTACCTACCGACGTACAATCCGTTCTCTCACGCGGCTGAAAAAGAACGTCGCCGTCTTAAGCTTGCCAAGATCTTCATCCACTTCATTCCCGTCGTCGTTGTCTTCTGCGCCGTCGTTCTCTGGTTCTTCTCTGATCCAGCTCCAGGGCAACCCAGGTAT

Coding sequence (CDS)

ATGAAGAGATCGGTGAGTGCTTCCAGAGTCTCCGATAAGGTGTTATTGAGTTCGCCGTCGTCGTCGTCGTCGTCGTCGTCGCAATCCGCAGTCTTTAGATCTTCGAGTGTGAGTTCCGGCTTGGACTCAGAGCTTTACCTACCGACGTACAATCCGTTCTCTCACGCGGCTGAAAAAGAACGTCGCCGTCTTAAGCTTGCCAAGATCTTCATCCACTTCATTCCCGTCGTCGTTGTCTTCTGCGCCGTCGTTCTCTGGTTCTTCTCTGATCCAGCTCCAGGGCAACCCAGGTAT

Protein sequence

MKRSVSASRVSDKVLLSSPSSSSSSSSQSAVFRSSSVSSGLDSELYLPTYNPFSHAAEKERRRLKLAKIFIHFIPVVVVFCAVVLWFFSDPAPGQPRY
BLAST of Cp4.1LG08g07230 vs. TrEMBL
Match: A0A0A0L1G0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017240 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-21
Identity = 64/91 (70.33%), Postives = 74/91 (81.32%), Query Frame = 1

Query: 1  MKRSVSASRVSDKVLLSSPSSSSSSSSQSAVFRSSSVSSGLDSELYLPTYNPFSHAAEKE 60
          MKRS SAS VSD   + S    SSS S S++FRSSSVSSGL+SE YLPT++PFSHAAEK+
Sbjct: 1  MKRSSSASIVSDNRFVCS----SSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKK 60

Query: 61 RRRLKLAKIFIHFIPVVVVFCAVVLWFFSDP 92
          RR LKLAKIFIH IP V++FCA+VLW FSDP
Sbjct: 61 RRHLKLAKIFIHSIPFVILFCAIVLWLFSDP 87

BLAST of Cp4.1LG08g07230 vs. TrEMBL
Match: M5WB70_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013973mg PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.9e-10
Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 1

Query: 1  MKRSVSASRVSDKVLLSSPSSSSSSSSQSAVFRSSSVSSGLDSELYLPTYNPFSHAAEKE 60
          M RS SASRVS+ ++++S S+S   S+       SS     D  L+LPTY+P SH A++E
Sbjct: 1  MHRSASASRVSEDLVVTSSSTSPPPSTFKPTTDDSS-----DQHLHLPTYDPLSHVAKRE 60

Query: 61 RRRLKLAKIFIHFIPVVVVFCAVVLWFFSDP 92
          RRR++ A+  IH IP+++V CA++LW FS+P
Sbjct: 61 RRRIRSAENAIHIIPLLLVLCAIILWLFSNP 86

BLAST of Cp4.1LG08g07230 vs. TrEMBL
Match: A0A068UL66_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027163001 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.0e-09
Identity = 43/94 (45.74%), Postives = 65/94 (69.15%), Query Frame = 1

Query: 1  MKRSVSASRVSDKVLLSSPSSSSSSSS---QSAVFRSSSVSSGLDSELYLPTYNPFSHAA 60
          M RS S++RVS++   +S SSS+++++    S   + ++ +S LD   +LPTYNP SH A
Sbjct: 1  MYRSSSSARVSEEFFSNSSSSSAAAAAGAMSSTNHKPATTTSDLD---HLPTYNPMSHLA 60

Query: 61 EKERRRLKLAKIFIHFIPVVVVFCAVVLWFFSDP 92
          +KE+ RL+  +  IH IPV++V CA+VLWFFS P
Sbjct: 61 KKEKSRLRSVENSIHLIPVLLVLCAIVLWFFSSP 91

BLAST of Cp4.1LG08g07230 vs. TrEMBL
Match: B3H4T0_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=At2g35658 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-08
Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = 1

Query: 1  MKRSVSASRVSDKVLLSSPSSSSSSSSQSAVFRSSSVSSGLDSELYLPTYNPFSHAAEKE 60
          M+RS SAS VSD++  +SPS S S        R  + +   DS L LP Y+P SH  +K 
Sbjct: 1  MRRSASASIVSDQLSANSPSPSPSPP------RIKTSADSDDSHLLLPRYDPNSHPGKKN 60

Query: 61 RRRLKLAKIFIHFIPVVVVFCAVVLWFFSDPA 93
          + R + A+  IHFIP+V++ CAV+LW FS+PA
Sbjct: 61 KSRFRSAENAIHFIPIVLILCAVILWMFSNPA 86

BLAST of Cp4.1LG08g07230 vs. TrEMBL
Match: B9T0L2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0192380 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-08
Identity = 37/75 (49.33%), Postives = 52/75 (69.33%), Query Frame = 1

Query: 20 SSSSSSSSQSAVFRSSSVSSGL--DSELYLPTYNPFSHAAEKERRRLKLAKIFIHFIPVV 79
          SSSS    Q ++F ++S ++      +L LPTY+P SH A+KER RL+ A+  IH IP+V
Sbjct: 5  SSSSRVGDQESLFVNNSTNTNYADKEQLQLPTYDPLSHVAKKERSRLRSAENAIHLIPLV 64

Query: 80 VVFCAVVLWFFSDPA 93
          +V CA++LWFFS PA
Sbjct: 65 LVLCAIILWFFSSPA 79

BLAST of Cp4.1LG08g07230 vs. TAIR10
Match: AT2G35658.2 (AT2G35658.2 unknown protein)

HSP 1 Score: 65.9 bits (159), Expect = 1.6e-11
Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = 1

Query: 1  MKRSVSASRVSDKVLLSSPSSSSSSSSQSAVFRSSSVSSGLDSELYLPTYNPFSHAAEKE 60
          M+RS SAS VSD++  +SPS S S        R  + +   DS L LP Y+P SH  +K 
Sbjct: 1  MRRSASASIVSDQLSANSPSPSPSPP------RIKTSADSDDSHLLLPRYDPNSHPGKKN 60

Query: 61 RRRLKLAKIFIHFIPVVVVFCAVVLWFFSDP 92
          + R + A+  IHFIP+V++ CAV+LW FS+P
Sbjct: 61 KSRFRSAENAIHFIPIVLILCAVILWMFSNP 85

BLAST of Cp4.1LG08g07230 vs. NCBI nr
Match: gi|659095827|ref|XP_008448787.1| (PREDICTED: uncharacterized protein LOC103490852 isoform X1 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 5.1e-23
Identity = 67/91 (73.63%), Postives = 77/91 (84.62%), Query Frame = 1

Query: 1  MKRSVSASRVSDKVLLSSPSSSSSSSSQSAVFRSSSVSSGLDSELYLPTYNPFSHAAEKE 60
          MKRS SAS VSDK  + S  SSSSS SQSA+FRSSSVS GL+SE YLPT++PFSHAAEK+
Sbjct: 1  MKRSSSASIVSDKRFVYS--SSSSSLSQSAIFRSSSVSFGLESEPYLPTFSPFSHAAEKK 60

Query: 61 RRRLKLAKIFIHFIPVVVVFCAVVLWFFSDP 92
          RR LKLAKIFIH IP +++FCA+VLW FSDP
Sbjct: 61 RRHLKLAKIFIHSIPFIILFCAIVLWLFSDP 89

BLAST of Cp4.1LG08g07230 vs. NCBI nr
Match: gi|659095829|ref|XP_008448788.1| (PREDICTED: uncharacterized protein LOC103490852 isoform X2 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 5.1e-23
Identity = 67/91 (73.63%), Postives = 77/91 (84.62%), Query Frame = 1

Query: 1  MKRSVSASRVSDKVLLSSPSSSSSSSSQSAVFRSSSVSSGLDSELYLPTYNPFSHAAEKE 60
          MKRS SAS VSDK  + S  SSSSS SQSA+FRSSSVS GL+SE YLPT++PFSHAAEK+
Sbjct: 1  MKRSSSASIVSDKRFVYS--SSSSSLSQSAIFRSSSVSFGLESEPYLPTFSPFSHAAEKK 60

Query: 61 RRRLKLAKIFIHFIPVVVVFCAVVLWFFSDP 92
          RR LKLAKIFIH IP +++FCA+VLW FSDP
Sbjct: 61 RRHLKLAKIFIHSIPFIILFCAIVLWLFSDP 89

BLAST of Cp4.1LG08g07230 vs. NCBI nr
Match: gi|778675256|ref|XP_011650378.1| (PREDICTED: uncharacterized protein LOC101212731 [Cucumis sativus])

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-21
Identity = 64/91 (70.33%), Postives = 74/91 (81.32%), Query Frame = 1

Query: 1  MKRSVSASRVSDKVLLSSPSSSSSSSSQSAVFRSSSVSSGLDSELYLPTYNPFSHAAEKE 60
          MKRS SAS VSD   + S    SSS S S++FRSSSVSSGL+SE YLPT++PFSHAAEK+
Sbjct: 1  MKRSSSASIVSDNRFVCS----SSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKK 60

Query: 61 RRRLKLAKIFIHFIPVVVVFCAVVLWFFSDP 92
          RR LKLAKIFIH IP V++FCA+VLW FSDP
Sbjct: 61 RRHLKLAKIFIHSIPFVILFCAIVLWLFSDP 87

BLAST of Cp4.1LG08g07230 vs. NCBI nr
Match: gi|700200697|gb|KGN55830.1| (hypothetical protein Csa_3G017240 [Cucumis sativus])

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-21
Identity = 64/91 (70.33%), Postives = 74/91 (81.32%), Query Frame = 1

Query: 1  MKRSVSASRVSDKVLLSSPSSSSSSSSQSAVFRSSSVSSGLDSELYLPTYNPFSHAAEKE 60
          MKRS SAS VSD   + S    SSS S S++FRSSSVSSGL+SE YLPT++PFSHAAEK+
Sbjct: 1  MKRSSSASIVSDNRFVCS----SSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKK 60

Query: 61 RRRLKLAKIFIHFIPVVVVFCAVVLWFFSDP 92
          RR LKLAKIFIH IP V++FCA+VLW FSDP
Sbjct: 61 RRHLKLAKIFIHSIPFVILFCAIVLWLFSDP 87

BLAST of Cp4.1LG08g07230 vs. NCBI nr
Match: gi|645265940|ref|XP_008238392.1| (PREDICTED: uncharacterized protein LOC103337030 [Prunus mume])

HSP 1 Score: 75.1 bits (183), Expect = 7.6e-11
Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 1

Query: 1  MKRSVSASRVSDKVLLSSPSSSSSSSSQSAVFRSSSVSSGLDSELYLPTYNPFSHAAEKE 60
          M RS SASRVS+ ++++S S+S   S+       SS     D  L+LPTY+P SH A+KE
Sbjct: 1  MHRSASASRVSEDLVVTSSSTSPPPSTFKPTTDDSS-----DQHLHLPTYDPLSHVAKKE 60

Query: 61 RRRLKLAKIFIHFIPVVVVFCAVVLWFFSDP 92
          RRR++ A+  IH IP+++V CA++LWFFS+P
Sbjct: 61 RRRIRSAENAIHIIPLLLVLCAIILWFFSNP 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L1G0_CUCSA1.5e-2170.33Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017240 PE=4 SV=1[more]
M5WB70_PRUPE5.9e-1046.15Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013973mg PE=4 SV=1[more]
A0A068UL66_COFCA5.0e-0945.74Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027163001 PE=4 SV=1[more]
B3H4T0_ARATH1.1e-0845.65Uncharacterized protein OS=Arabidopsis thaliana GN=At2g35658 PE=4 SV=1[more]
B9T0L2_RICCO1.4e-0849.33Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0192380 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G35658.21.6e-1145.05 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659095827|ref|XP_008448787.1|5.1e-2373.63PREDICTED: uncharacterized protein LOC103490852 isoform X1 [Cucumis melo][more]
gi|659095829|ref|XP_008448788.1|5.1e-2373.63PREDICTED: uncharacterized protein LOC103490852 isoform X2 [Cucumis melo][more]
gi|778675256|ref|XP_011650378.1|2.1e-2170.33PREDICTED: uncharacterized protein LOC101212731 [Cucumis sativus][more]
gi|700200697|gb|KGN55830.1|2.1e-2170.33hypothetical protein Csa_3G017240 [Cucumis sativus][more]
gi|645265940|ref|XP_008238392.1|7.6e-1148.35PREDICTED: uncharacterized protein LOC103337030 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g07230.1Cp4.1LG08g07230.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34189FAMILY NOT NAMEDcoord: 2..92
score: 5.8
NoneNo IPR availablePANTHERPTHR34189:SF1SUBFAMILY NOT NAMEDcoord: 2..92
score: 5.8

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g07230Wax gourdcpewgoB1090
Cp4.1LG08g07230Cucurbita pepo (Zucchini)cpecpeB250
Cp4.1LG08g07230Cucurbita pepo (Zucchini)cpecpeB508
Cp4.1LG08g07230Cucurbita maxima (Rimu)cmacpeB364
Cp4.1LG08g07230Cucurbita maxima (Rimu)cmacpeB852
Cp4.1LG08g07230Cucurbita moschata (Rifu)cmocpeB328
Cp4.1LG08g07230Cucurbita moschata (Rifu)cmocpeB601
Cp4.1LG08g07230Cucurbita moschata (Rifu)cmocpeB797
Cp4.1LG08g07230Cucumber (Gy14) v2cgybcpeB445
Cp4.1LG08g07230Melon (DHL92) v3.6.1cpemedB948
Cp4.1LG08g07230Silver-seed gourdcarcpeB0808