Cucsa.321240 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.321240
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Gamma-glutamyl phosphate reductase
Location	scaffold03080 : 1056249 .. 1056758 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGCCACCCGAAACCCAAGCAGATGAAGAGATCATCCAGTGCCTCCATAGTCTCAGATAATAGATTCGTATGTTCCTCGTCGTCTTTGTCGCTATCCTCAATCTTCAGATCTTCCAGTGTCAGTTCCGGATTGGAATCAGAGCCTTACCTGCCAACGTTCAGTCCCTTCTCTCACGCTGCCGAGAAGAAACGTCGCCATCTTAAGCTCGCTAAGATTTTCATCCACTCCATCCCTTTCGTCATTCTCTTTTGCGCCATCGTTCTGTGGTTATTCTCCGATCCAGGTACTGAAATTACTCGAGTGAAAGATGCTCGTAGATCGAGATCGACTATTTGAATATTAAAGATGACAAATAGTTAATATATTTTAATTAGTAATTGCCGCCGGACTTGTAAATATCTTTGTGGATACCAATGGATTATCGATTACACGTACAAGCAGAGTGCTTAAAATCATTGGGAATCCAGTCTGTCGACCTTGTTGTCGTTATGTATGCGCTTCTTATTTT

mRNA sequence

CCGGCCACCCGAAACCCAAGCAGATGAAGAGATCATCCAGTGCCTCCATAGTCTCAGATAATAGATTCGTATGTTCCTCGTCGTCTTTGTCGCTATCCTCAATCTTCAGATCTTCCAGTGTCAGTTCCGGATTGGAATCAGAGCCTTACCTGCCAACGTTCAGTCCCTTCTCTCACGCTGCCGAGAAGAAACGTCGCCATCTTAAGCTCGCTAAGATTTTCATCCACTCCATCCCTTTCGTCATTCTCTTTTGCGCCATCGTTCTGTGGTTATTCTCCGATCCAGGTACTGAAATTACTCGAGTGAAAGATGCTCGTAGATCGAGATCGACTATTTGAATATTAAAGATGACAAATAGTTAATATATTTTAATTAGTAATTGCCGCCGGACTTGTAAATATCTTTGTGGATACCAATGGATTATCGATTACACGTACAAGCAGAGTGCTTAAAATCATTGGGAATCCAGTCTGTCGACCTTGTTGTCGTTATGTATGCGCTTCTTATTTT

Coding sequence (CDS)

ATGAAGAGATCATCCAGTGCCTCCATAGTCTCAGATAATAGATTCGTATGTTCCTCGTCGTCTTTGTCGCTATCCTCAATCTTCAGATCTTCCAGTGTCAGTTCCGGATTGGAATCAGAGCCTTACCTGCCAACGTTCAGTCCCTTCTCTCACGCTGCCGAGAAGAAACGTCGCCATCTTAAGCTCGCTAAGATTTTCATCCACTCCATCCCTTTCGTCATTCTCTTTTGCGCCATCGTTCTGTGGTTATTCTCCGATCCAGGTACTGAAATTACTCGAGTGAAAGATGCTCGTAGATCGAGATCGACTATTTGA

Protein sequence

MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHLKLAKIFIHSIPFVILFCAIVLWLFSDPGTEITRVKDARRSRSTI*

Homology

[Close]

BLAST of Cucsa.321240 vs. TrEMBL
Match: A0A0A0L1G0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017240 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.8e-49
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1


Query: 1   MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60
           MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL
Sbjct: 1   MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60

Query: 61  KLAKIFIHSIPFVILFCAIVLWLFSDPGTEITRVKDARRSRSTI 105
           KLAKIFIHSIPFVILFCAIVLWLFSDPGTEITRVKDARRSRSTI
Sbjct: 61  KLAKIFIHSIPFVILFCAIVLWLFSDPGTEITRVKDARRSRSTI 104

[Close]

BLAST of Cucsa.321240 vs. TrEMBL
Match: M5WB70_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013973mg PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.4e-11
Identity = 38/87 (43.68%), Postives = 59/87 (67.82%), Query Frame = 1


Query: 1  MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60
          M RS+SAS VS++  V SSS+    S F+ ++  S  +   +LPT+ P SH A+++RR +
Sbjct: 1  MHRSASASRVSEDLVVTSSSTSPPPSTFKPTTDDSS-DQHLHLPTYDPLSHVAKRERRRI 60

Query: 61 KLAKIFIHSIPFVILFCAIVLWLFSDP 88
          + A+  IH IP +++ CAI+LWLFS+P
Sbjct: 61 RSAENAIHIIPLLLVLCAIILWLFSNP 86

[Close]

BLAST of Cucsa.321240 vs. TrEMBL
Match: A0A0B0PAT8_GOSAR (Gamma-glutamyl phosphate reductase OS=Gossypium arboreum GN=F383_24689 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-10
Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 1


Query: 1  MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60
          M RSS ++ VS   F+ S  S SLSS    S     L  +  LP ++P S AAEK+R HL
Sbjct: 1  MLRSSCSNRVSSEVFLESPDSQSLSSNQHGSETV--LLDKQLLPKYNPLSRAAEKERSHL 60

Query: 61 KLAKIFIHSIPFVILFCAIVLWLFSDPGTEITR 94
          + A+  +H IPFV++FC  +LWLFS  GT ++R
Sbjct: 61 RSAENAVHIIPFVLVFCGFILWLFSSIGTTMSR 91

[Close]

BLAST of Cucsa.321240 vs. TrEMBL
Match: G7I2Z4_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_1g090200 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.3e-09
Identity = 37/87 (42.53%), Postives = 55/87 (63.22%), Query Frame = 1


Query: 1  MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60
          M RS+S +  SD+ F  ++SS S      SSS+S G  S   LPT+ P    A+K++  +
Sbjct: 2  MYRSASWNKFSDDYFKHATSSSS------SSSISPGQRSSNDLPTYDPIVELAKKEKARV 61

Query: 61 KLAKIFIHSIPFVILFCAIVLWLFSDP 88
          K ++  +H IPFV+L CAI+LW+FS+P
Sbjct: 62 KFSENAVHVIPFVLLLCAIILWIFSNP 82

[Close]

BLAST of Cucsa.321240 vs. TrEMBL
Match: B3H642_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=At2g35658 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.0e-09
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 1


Query: 1  MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60
          M+RS+SASIVSD     S S        ++S+ S   +S   LP + P SH  +K +   
Sbjct: 1  MRRSASASIVSDQLSANSPSPSPSPPRIKTSADSD--DSHLLLPRYDPNSHPGKKNKSRF 60

Query: 61 KLAKIFIHSIPFVILFCAIVLWLFSDPGTEITRVKD 97
          + A+  IH IP V++ CA++LW+FS+PG +I  + D
Sbjct: 61 RSAENAIHFIPIVLILCAVILWMFSNPGNQIQFLGD 94

[Close]

BLAST of Cucsa.321240 vs. TAIR10
Match: AT2G35658.2 (AT2G35658.2 unknown protein)

HSP 1 Score: 68.2 bits (165), Expect = 3.5e-12
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 1


Query: 1  MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60
          M+RS+SASIVSD     S S        ++S+ S   +S   LP + P SH  +K +   
Sbjct: 1  MRRSASASIVSDQLSANSPSPSPSPPRIKTSADSD--DSHLLLPRYDPNSHPGKKNKSRF 60

Query: 61 KLAKIFIHSIPFVILFCAIVLWLFSDPGTEITRVKD 97
          + A+  IH IP V++ CA++LW+FS+PG +I  + D
Sbjct: 61 RSAENAIHFIPIVLILCAVILWMFSNPGNQIQFLGD 94

[Close]

BLAST of Cucsa.321240 vs. TAIR10
Match: AT5G61630.1 (AT5G61630.1 unknown protein)

HSP 1 Score: 49.3 bits (116), Expect = 1.7e-06
Identity = 31/92 (33.70%), Postives = 49/92 (53.26%), Query Frame = 1


Query: 1  MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFS-PFSHAAEKKRRH 60
          M RS+S + V ++        L + S+        G   E  LP+++ P     +K++  
Sbjct: 1  MYRSASWNRVPEDYSSAPPKGLWMGSVI-------GPLDENELPSYNNPPEEMVKKEKSR 60

Query: 61 LKLAKIFIHSIPFVILFCAIVLWLFSDPGTEI 92
           K A+  IH IPFV+L CA+VLWLFS+P  ++
Sbjct: 61 AKFAENAIHIIPFVLLACALVLWLFSNPDVDV 85

[Close]

BLAST of Cucsa.321240 vs. TAIR10
Match: AT5G07490.1 (AT5G07490.1 unknown protein)

HSP 1 Score: 47.0 bits (110), Expect = 8.4e-06
Identity = 22/54 (40.74%), Postives = 33/54 (61.11%), Query Frame = 1


Query: 38 ESEPYLPTFSPFSHAAEKKRRHLKLAKIFIHSIPFVILFCAIVLWLFSDPGTEI 92
          E  PY PT    +   +K++   K A+  +H IPFV+L CA+VLW FS+P  ++
Sbjct: 32 EPAPYDPTGQEMT---KKEKSRTKFAENAVHIIPFVLLACALVLWFFSNPDVDV 82

[Close]

BLAST of Cucsa.321240 vs. NCBI nr
Match: gi|700200697|gb|KGN55830.1| (hypothetical protein Csa_3G017240 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 2.6e-49
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1


Query: 1   MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60
           MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL
Sbjct: 1   MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60

Query: 61  KLAKIFIHSIPFVILFCAIVLWLFSDPGTEITRVKDARRSRSTI 105
           KLAKIFIHSIPFVILFCAIVLWLFSDPGTEITRVKDARRSRSTI
Sbjct: 61  KLAKIFIHSIPFVILFCAIVLWLFSDPGTEITRVKDARRSRSTI 104

[Close]

BLAST of Cucsa.321240 vs. NCBI nr
Match: gi|778675256|ref|XP_011650378.1| (PREDICTED: uncharacterized protein LOC101212731 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 1.3e-40
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1


Query: 1  MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60
          MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL
Sbjct: 1  MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60

Query: 61 KLAKIFIHSIPFVILFCAIVLWLFSDPG 89
          KLAKIFIHSIPFVILFCAIVLWLFSDPG
Sbjct: 61 KLAKIFIHSIPFVILFCAIVLWLFSDPG 88

[Close]

BLAST of Cucsa.321240 vs. NCBI nr
Match: gi|659095829|ref|XP_008448788.1| (PREDICTED: uncharacterized protein LOC103490852 isoform X2 [Cucumis melo])

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-35
Identity = 82/90 (91.11%), Postives = 84/90 (93.33%), Query Frame = 1


Query: 1  MKRSSSASIVSDNRFV--CSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRR 60
          MKRSSSASIVSD RFV   SSSSLS S+IFRSSSVS GLESEPYLPTFSPFSHAAEKKRR
Sbjct: 1  MKRSSSASIVSDKRFVYSSSSSSLSQSAIFRSSSVSFGLESEPYLPTFSPFSHAAEKKRR 60

Query: 61 HLKLAKIFIHSIPFVILFCAIVLWLFSDPG 89
          HLKLAKIFIHSIPF+ILFCAIVLWLFSDPG
Sbjct: 61 HLKLAKIFIHSIPFIILFCAIVLWLFSDPG 90

[Close]

BLAST of Cucsa.321240 vs. NCBI nr
Match: gi|659095827|ref|XP_008448787.1| (PREDICTED: uncharacterized protein LOC103490852 isoform X1 [Cucumis melo])

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-35
Identity = 82/90 (91.11%), Postives = 84/90 (93.33%), Query Frame = 1


Query: 1  MKRSSSASIVSDNRFV--CSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRR 60
          MKRSSSASIVSD RFV   SSSSLS S+IFRSSSVS GLESEPYLPTFSPFSHAAEKKRR
Sbjct: 1  MKRSSSASIVSDKRFVYSSSSSSLSQSAIFRSSSVSFGLESEPYLPTFSPFSHAAEKKRR 60

Query: 61 HLKLAKIFIHSIPFVILFCAIVLWLFSDPG 89
          HLKLAKIFIHSIPF+ILFCAIVLWLFSDPG
Sbjct: 61 HLKLAKIFIHSIPFIILFCAIVLWLFSDPG 90

[Close]

BLAST of Cucsa.321240 vs. NCBI nr
Match: gi|720010195|ref|XP_010259170.1| (PREDICTED: uncharacterized protein LOC104598687 [Nelumbo nucifera])

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-11
Identity = 38/101 (37.62%), Postives = 64/101 (63.37%), Query Frame = 1


Query: 1   MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60
           M RS+SA+ VSD  F+  SS  S S   ++ +V +  +    +PT++P S AA+K+++ +
Sbjct: 1   MHRSASATRVSDEFFIQHSSPPSSSKASQTHNVKTAFDDINEIPTYNPLSDAAKKEKQRI 60

Query: 61  KLAKIFIHSIPFVILFCAIVLWLFSDPGTEITRVKDARRSR 102
           K A+  +H IPFV+L CA++LW FS+P  ++    ++  SR
Sbjct: 61  KFAENAVHVIPFVLLLCALILWFFSNPEVDMVHKDNSILSR 101

The following BLAST results are available for this feature:

BLAST of Cucsa.321240 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1G0_CUCSA	1.8e-49	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017240 PE=4 SV=1	[more]
M5WB70_PRUPE	7.4e-11	43.68	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013973mg PE=4 SV=1	[more]
A0A0B0PAT8_GOSAR	1.3e-10	45.16	Gamma-glutamyl phosphate reductase OS=Gossypium arboreum GN=F383_24689 PE=4 SV=1	[more]
G7I2Z4_MEDTR	5.3e-09	42.53	Transmembrane protein, putative OS=Medicago truncatula GN=MTR_1g090200 PE=4 SV=1	[more]
B3H642_ARATH	7.0e-09	38.54	Uncharacterized protein OS=Arabidopsis thaliana GN=At2g35658 PE=4 SV=1	[more]

BLAST of Cucsa.321240 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35658.2	3.5e-12	38.54	unknown protein	[more]
AT5G61630.1	1.7e-06	33.70	unknown protein	[more]
AT5G07490.1	8.4e-06	40.74	unknown protein	[more]

BLAST of Cucsa.321240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700200697\|gb\|KGN55830.1\|	2.6e-49	100.00	hypothetical protein Csa_3G017240 [Cucumis sativus]	[more]
gi\|778675256\|ref\|XP_011650378.1\|	1.3e-40	100.00	PREDICTED: uncharacterized protein LOC101212731 [Cucumis sativus]	[more]
gi\|659095829\|ref\|XP_008448788.1\|	2.1e-35	91.11	PREDICTED: uncharacterized protein LOC103490852 isoform X2 [Cucumis melo]	[more]
gi\|659095827\|ref\|XP_008448787.1\|	2.1e-35	91.11	PREDICTED: uncharacterized protein LOC103490852 isoform X1 [Cucumis melo]	[more]
gi\|720010195\|ref\|XP_010259170.1\|	1.6e-11	37.62	PREDICTED: uncharacterized protein LOC104598687 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.321240.1	Cucsa.321240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34189	FAMILY NOT NAMED	coord: 2..97 score: 1.8
None	No IPR available	PANTHER	PTHR34189:SF1	SUBFAMILY NOT NAMED	coord: 2..97 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.321240	Cla005604	Watermelon (97103) v1	cgywmB585
Cucsa.321240	Csa3G017240	Cucumber (Chinese Long) v2	cgycuB458
Cucsa.321240	MELO3C013908	Melon (DHL92) v3.5.1	cgymeB532
Cucsa.321240	ClCG10G002350	Watermelon (Charleston Gray)	cgywcgB556
Cucsa.321240	CSPI03G02350	Wild cucumber (PI 183967)	cgycpiB484
Cucsa.321240	CmaCh16G011110	Cucurbita maxima (Rimu)	cgycmaB0889
Cucsa.321240	CmaCh06G008080	Cucurbita maxima (Rimu)	cgycmaB0897
Cucsa.321240	CmoCh06G008310	Cucurbita moschata (Rifu)	cgycmoB0893
Cucsa.321240	CmoCh16G011620	Cucurbita moschata (Rifu)	cgycmoB0887
Cucsa.321240	Lsi07G012630	Bottle gourd (USVL1VR-Ls)	cgylsiB530
Cucsa.321240	Cp4.1LG14g09310	Cucurbita pepo (Zucchini)	cgycpeB0847
Cucsa.321240	Cp4.1LG08g07230	Cucurbita pepo (Zucchini)	cgycpeB0857
Cucsa.321240	MELO3C013908.2	Melon (DHL92) v3.6.1	cgymedB533
Cucsa.321240	CsaV3_3G002380	Cucumber (Chinese Long) v3	cgycucB499
Cucsa.321240	Cla97C10G186930	Watermelon (97103) v2	cgywmbB562
Cucsa.321240	Bhi11G000054	Wax gourd	cgywgoB642
Cucsa.321240	Carg23252	Silver-seed gourd	carcgyB0792

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.321240	Silver-seed gourd	carcgyB0642
Cucsa.321240	Silver-seed gourd	carcgyB0891
Cucsa.321240	Cucumber (Chinese Long) v3	cgycucB500
Cucsa.321240	Watermelon (97103) v2	cgywmbB563
Cucsa.321240	Cucumber (Gy14) v1	cgycgyB146
Cucsa.321240	Cucurbita maxima (Rimu)	cgycmaB0892
Cucsa.321240	Cucurbita maxima (Rimu)	cgycmaB0893
Cucsa.321240	Cucurbita moschata (Rifu)	cgycmoB0889
Cucsa.321240	Wild cucumber (PI 183967)	cgycpiB485
Cucsa.321240	Cucumber (Chinese Long) v2	cgycuB459
Cucsa.321240	Melon (DHL92) v3.5.1	cgymeB531
Cucsa.321240	Watermelon (Charleston Gray)	cgywcgB555
Cucsa.321240	Watermelon (97103) v1	cgywmB582
Cucsa.321240	Cucurbita pepo (Zucchini)	cgycpeB0853
Cucsa.321240	Bottle gourd (USVL1VR-Ls)	cgylsiB529
Cucsa.321240	Melon (DHL92) v3.6.1	cgymedB532