Cp4.1LG07g07670 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG07g07670
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRibosomal RNA processing protein 1 like
LocationCp4.1LG07 : 6748330 .. 6750003 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTGGTTGAAGGAGATCAAGATTTCACTTCATTGATTAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGGGATAAAACCCTCCGTGTAATCATCAAGACATGGCTTCCCACTCAAACGAGCCTCTCCGATGGCGATATGAAGAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCCGATAAGCTTCCTGTTCAAACCGAGCTTATTAATCGCCTTGCTTCTTTGCTCCTACATCTCGAATTGCCGCTTGCTTTTCAGTACTTTTCTATTTTTCTTCTCACCATGCGTCGTGAATGGGCTGGCATTGATGCGCTTAGGTTAGATAAGTTTTATCTTTTGATTCGTAGATTTATGCACCAGTTTTTTGCTTTGTTGAAGAAGAATTCTTGGGATTTGGAACTGTGTCGTCGTTCAGTTCAAGTTTTGGAAGAAAGGGTGTTTTTCACTGATGATAAGTTTCATGGGAATGGTGTTAATTATCAAATTGCTTCTGTGTTTCTTGAAGAACTTAGGCCGTTTCTTCCTCTTGGGAAGGAAGTTATTGATATCCTGTTCAAGCCATTCATTTTGTCCATGGCTAAATTGTCTGATAAAGTTATGTTGGGAAAAATTAAGTCTAATCTTTTTGATGTGTTACTTAAAATGGGGAAGCAATTGCTCGAGCGTCGAAAATGTGGAGAGGATATCAACTCTGATGATGATATAGTTGTTTATGGGACAATTCCATTGACAAACCTTTTCTCCTCTACATTTTATGAATTGGGTTCTTCACCCGATTGTTGTCAATCGAATAGAAAGGTACTGTTTGCGATGCACGAAGAGTATCAGAAGTTGGAGAAAAGTTTTATCTCGTCGGGGATTGAGATTTCCATGCCAGATCTTCAAGAGCAAGATGGTGATGAAGTGCCTACTTTGGTTCCTATTTCCAGTGAAGAAATTTCCATGGCTGATGTTGATGTTAGCGATGAAATCACTGATAAGGCACTTAAAAAGAAAAAGAAGACTAAAAAGGTCTCCGATGGCAGTGGCAAGAAGAAGGCTAAGAAGGCGAAGAAGAACACGAACGGTATTTCTGATCTTGTTTCTAACAATACTCATATGAATAAGGACGATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAACATTTGATGAATCTGTGATATCGAACCTTCAGATGCAATTCGAGAGGGTTGCTGCTGAAGCTGAGTTTGGAGACAATGTTATGACCCCTGTAATATCAGCCAATGGCTCAGTCAAGAAAAGAAAGAGAGCGAAGAAGGTCGATGTGCAGCAGACACATGATGTAGTACTTCCTAACCAAGTTGACACTGAAGGAAATACAGCTGCAAAAAGTGGAGAGAATAGTGTAAAGAAGGTAAGATTTTCCATGAAAAATAACTTGGTATGGAAACCCCATAATCCGTTGCCACCGGAAAGTTTGAGACTGCCCCCCACCGTTACTCCGAGGGGAAGTGCCCTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCTGCCACAACTAAAAGAACAAAAAGGAGAGCTGTCACAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAACCGAAATCTAAGAGTACTTAG

mRNA sequence

ATGGAGGTGGTTGAAGGAGATCAAGATTTCACTTCATTGATTAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGGGATAAAACCCTCCGTGTAATCATCAAGACATGGCTTCCCACTCAAACGAGCCTCTCCGATGGCGATATGAAGAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCCGATAAGCTTCCTGTTCAAACCGAGCTTATTAATCGCCTTGCTTCTTTGCTCCTACATCTCGAATTGCCGCTTGCTTTTCAGTACTTTTCTATTTTTCTTCTCACCATGCGTCGTGAATGGGCTGGCATTGATGCGCTTAGGTTAGATAAGTTTTATCTTTTGATTCGTAGATTTATGCACCAGTTTTTTGCTTTGTTGAAGAAGAATTCTTGGGATTTGGAACTGTGTCGTCGTTCAGTTCAAGTTTTGGAAGAAAGGGTGTTTTTCACTGATGATAAGTTTCATGGGAATGGTGTTAATTATCAAATTGCTTCTGTGTTTCTTGAAGAACTTAGGCCGTTTCTTCCTCTTGGGAAGGAAGTTATTGATATCCTGTTCAAGCCATTCATTTTGTCCATGGCTAAATTGTCTGATAAAGTTATGTTGGGAAAAATTAAGTCTAATCTTTTTGATGTGTTACTTAAAATGGGGAAGCAATTGCTCGAGCGTCGAAAATGTGGAGAGGATATCAACTCTGATGATGATATAGTTGTTTATGGGACAATTCCATTGACAAACCTTTTCTCCTCTACATTTTATGAATTGGGTTCTTCACCCGATTGTTGTCAATCGAATAGAAAGGTACTGTTTGCGATGCACGAAGAGTATCAGAAGTTGGAGAAAAGTTTTATCTCGTCGGGGATTGAGATTTCCATGCCAGATCTTCAAGAGCAAGATGGTGATGAAGTGCCTACTTTGGTTCCTATTTCCAGTGAAGAAATTTCCATGGCTGATGTTGATGTTAGCGATGAAATCACTGATAAGGCACTTAAAAAGAAAAAGAAGACTAAAAAGGTCTCCGATGGCAGTGGCAAGAAGAAGGCTAAGAAGGCGAAGAAGAACACGAACGGTATTTCTGATCTTGTTTCTAACAATACTCATATGAATAAGGACGATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAACATTTGATGAATCTGTGATATCGAACCTTCAGATGCAATTCGAGAGGGTTGCTGCTGAAGCTGAGTTTGGAGACAATGTTATGACCCCTGTAATATCAGCCAATGGCTCAGTCAAGAAAAGAAAGAGAGCGAAGAAGGTCGATGTGCAGCAGACACATGATGTAGTACTTCCTAACCAAGTTGACACTGAAGGAAATACAGCTGCAAAAAGTGGAGAGAATAGTGTAAAGAAGGTAAGATTTTCCATGAAAAATAACTTGGTATGGAAACCCCATAATCCGTTGCCACCGGAAAGTTTGAGACTGCCCCCCACCGTTACTCCGAGGGGAAGTGCCCTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCTGCCACAACTAAAAGAACAAAAAGGAGAGCTGTCACAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAACCGAAATCTAAGAGTACTTAG

Coding sequence (CDS)

ATGGAGGTGGTTGAAGGAGATCAAGATTTCACTTCATTGATTAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGGGATAAAACCCTCCGTGTAATCATCAAGACATGGCTTCCCACTCAAACGAGCCTCTCCGATGGCGATATGAAGAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCCGATAAGCTTCCTGTTCAAACCGAGCTTATTAATCGCCTTGCTTCTTTGCTCCTACATCTCGAATTGCCGCTTGCTTTTCAGTACTTTTCTATTTTTCTTCTCACCATGCGTCGTGAATGGGCTGGCATTGATGCGCTTAGGTTAGATAAGTTTTATCTTTTGATTCGTAGATTTATGCACCAGTTTTTTGCTTTGTTGAAGAAGAATTCTTGGGATTTGGAACTGTGTCGTCGTTCAGTTCAAGTTTTGGAAGAAAGGGTGTTTTTCACTGATGATAAGTTTCATGGGAATGGTGTTAATTATCAAATTGCTTCTGTGTTTCTTGAAGAACTTAGGCCGTTTCTTCCTCTTGGGAAGGAAGTTATTGATATCCTGTTCAAGCCATTCATTTTGTCCATGGCTAAATTGTCTGATAAAGTTATGTTGGGAAAAATTAAGTCTAATCTTTTTGATGTGTTACTTAAAATGGGGAAGCAATTGCTCGAGCGTCGAAAATGTGGAGAGGATATCAACTCTGATGATGATATAGTTGTTTATGGGACAATTCCATTGACAAACCTTTTCTCCTCTACATTTTATGAATTGGGTTCTTCACCCGATTGTTGTCAATCGAATAGAAAGGTACTGTTTGCGATGCACGAAGAGTATCAGAAGTTGGAGAAAAGTTTTATCTCGTCGGGGATTGAGATTTCCATGCCAGATCTTCAAGAGCAAGATGGTGATGAAGTGCCTACTTTGGTTCCTATTTCCAGTGAAGAAATTTCCATGGCTGATGTTGATGTTAGCGATGAAATCACTGATAAGGCACTTAAAAAGAAAAAGAAGACTAAAAAGGTCTCCGATGGCAGTGGCAAGAAGAAGGCTAAGAAGGCGAAGAAGAACACGAACGGTATTTCTGATCTTGTTTCTAACAATACTCATATGAATAAGGACGATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAACATTTGATGAATCTGTGATATCGAACCTTCAGATGCAATTCGAGAGGGTTGCTGCTGAAGCTGAGTTTGGAGACAATGTTATGACCCCTGTAATATCAGCCAATGGCTCAGTCAAGAAAAGAAAGAGAGCGAAGAAGGTCGATGTGCAGCAGACACATGATGTAGTACTTCCTAACCAAGTTGACACTGAAGGAAATACAGCTGCAAAAAGTGGAGAGAATAGTGTAAAGAAGGTAAGATTTTCCATGAAAAATAACTTGGTATGGAAACCCCATAATCCGTTGCCACCGGAAAGTTTGAGACTGCCCCCCACCGTTACTCCGAGGGGAAGTGCCCTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCTGCCACAACTAAAAGAACAAAAAGGAGAGCTGTCACAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAACCGAAATCTAAGAGTACTTAG

Protein sequence

MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKLPVQTELINRLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKEVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVVYGTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQDGDEVPTLVPISSEEISMADVDVSDEITDKALKKKKKTKKVSDGSGKKKAKKAKKNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFGDNVMTPVISANGSVKKRKRAKKVDVQQTHDVVLPNQVDTEGNTAAKSGENSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVTMRAKKGVRSLPVKRLKKPKSKST
BLAST of Cp4.1LG07g07670 vs. Swiss-Prot
Match: RRP1B_MOUSE (Ribosomal RNA processing protein 1 homolog B OS=Mus musculus GN=Rrp1b PE=1 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 1.8e-24
Identity = 80/230 (34.78%), Postives = 123/230 (53.48%), Query Frame = 1

Query: 17  LASSNKATRDKTLRVIIKTWLPTQT-----SLSDGDMKKLWKGLFYCVWHADKLPVQTEL 76
           LASS K  RD+ +R + + +L  +T     S S  ++ K+WKGLFYC+W  D+  +Q EL
Sbjct: 16  LASSEKGVRDRAVRKL-RQYLSARTQSDTGSFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75

Query: 77  INRLASLLLHLELPLAFQYFSI--FLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALLK 136
            N + S L+H+   L  QY  I  F  TM REW GID L+LDK+Y+LIR  + Q F +LK
Sbjct: 76  AN-IISQLIHVVNSLEAQYLFIQTFWQTMNREWQGIDKLQLDKYYMLIRLVLRQSFEVLK 135

Query: 137 KNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKEVID---- 196
           +N+W+       + +L + +   + +   NGV   +  V+LEEL      G E++     
Sbjct: 136 RNAWEESQITLFLDILMKEILSPESQ-SPNGVRTHLIDVYLEELTTV--GGAELLADQNL 195

Query: 197 ILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMG----KQLLERRKCGED 232
            L  PF    AK  D  ++  +   +F+V++       ++ +E RK  ED
Sbjct: 196 KLIDPFCRIAAKTKDHTLVQTVARGVFEVIVDQSACVPQESVEERKTKED 240

BLAST of Cp4.1LG07g07670 vs. Swiss-Prot
Match: RRP1B_HUMAN (Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens GN=RRP1B PE=1 SV=3)

HSP 1 Score: 107.8 bits (268), Expect = 3.8e-22
Identity = 73/210 (34.76%), Postives = 112/210 (53.33%), Query Frame = 1

Query: 17  LASSNKATRDKTLR-----VIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKLPVQTEL 76
           LASS K  RD+ ++     + +KT   T    S  ++ K+WKGLFYC+W  D+  +Q EL
Sbjct: 16  LASSEKGIRDRAVKKLRQYISVKTQRETG-GFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75

Query: 77  INRLASLLLHLELPLAFQYF-SIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALLKK 136
            N +A L+  +    A   F   F  TM REW GID LRLDK+Y+LIR  + Q F +LK+
Sbjct: 76  ANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLRQSFEVLKR 135

Query: 137 NSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKEVI---DIL 196
           N W+    +  + VL + V   + +   NGV +    ++L+EL      GKE++   ++ 
Sbjct: 136 NGWEESRIKVFLDVLMKEVLCPESQ-SPNGVRFHFIDIYLDELSKV--GGKELLADQNLK 195

Query: 197 F-KPFILSMAKLSDKVMLGKIKSNLFDVLL 217
           F  PF    AK  D  ++  I   +F+ ++
Sbjct: 196 FIDPFCKIAAKTKDHTLVQTIARGVFEAIV 221

BLAST of Cp4.1LG07g07670 vs. Swiss-Prot
Match: RRP1_HUMAN (Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens GN=RRP1 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 7.9e-20
Identity = 68/224 (30.36%), Postives = 111/224 (49.55%), Query Frame = 1

Query: 13  LIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKLPV 72
           L + LA + + TRD+ +R + K ++  +T  + G     ++ K+WKGLFYC+W  DK P+
Sbjct: 13  LAQRLAGNEQVTRDRAVRKLRK-YIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDK-PL 72

Query: 73  QTELINRLASLLLHLELPLAFQYFSI--FLLTMRREWAGIDALRLDKFYLLIRRFMHQFF 132
             E + R  S L+H       Q+  +  F  TM REW GID LRLDKFY+L+R  +++  
Sbjct: 73  LQEELGRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLNESL 132

Query: 133 ALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKEVID 192
            +LK   W+       +++L   +     +   NGV      +FLEEL     +G E + 
Sbjct: 133 KVLKMQGWEERQIEELLELLMTEILHPSSQ-APNGVKSHFIEIFLEEL---TKVGAEELT 192

Query: 193 I-----LFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLE 225
                    PF    A+  D ++L  I   +F+ +++     +E
Sbjct: 193 ADQNLKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIE 230

BLAST of Cp4.1LG07g07670 vs. Swiss-Prot
Match: RRP1_MOUSE (Ribosomal RNA processing protein 1 homolog A OS=Mus musculus GN=Rrp1 PE=1 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 1.3e-19
Identity = 68/221 (30.77%), Postives = 109/221 (49.32%), Query Frame = 1

Query: 13  LIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKLPV 72
           L + LA + + TRD+ LR + K ++  ++  + G     ++ K+WKGLFYC+W  DK P+
Sbjct: 13  LAQRLAGNEQVTRDRALRKLRK-YIEARSQRATGGFTPDELLKVWKGLFYCMWMQDK-PL 72

Query: 73  QTELINRLASLLLHL--ELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFF 132
           Q E + R  + L+H         Q+   F  TM REW GID LRLDKFY+L+R  + +  
Sbjct: 73  QQEELGRTIAQLVHAFHTTEAQHQFLKAFWQTMIREWVGIDRLRLDKFYMLMRMVLSESL 132

Query: 133 ALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPF--LPLGKEV 192
             +K   WD     + +++L   +   D +   +GV      +FLEEL       L  + 
Sbjct: 133 KAVKARGWDERQIEQLLELLTTEILNPDSQ-APSGVKSHFLEIFLEELAKVGAAELTADQ 192

Query: 193 IDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLE 225
                 PF    A+  D  +L KI  ++F  +++     +E
Sbjct: 193 NLQFIDPFCQIAARTKDSQVLHKIIQSIFQTIVEQAPLAIE 230

BLAST of Cp4.1LG07g07670 vs. Swiss-Prot
Match: RRP1_SCHPO (Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC9B6.07 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.8e-19
Identity = 72/196 (36.73%), Postives = 104/196 (53.06%), Query Frame = 1

Query: 14  IKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKLPVQTELIN 73
           IK LA++++ TRDK L  + + +L  +      D  KLWKGLFYC+W ADK   Q +L +
Sbjct: 8   IKKLAANDRKTRDKALESL-QRFLSQKKKFERLDFLKLWKGLFYCMWMADKPLYQQKLSD 67

Query: 74  RLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALLKKNSW 133
            LA+L+  + +     + S F  TM REW GID LR DKFYLL+RRF    F  ++  S 
Sbjct: 68  NLAALVPIVWIDNRILFQSTFWETMGREWTGIDILRTDKFYLLMRRFCAAAFRDIQTRSK 127

Query: 134 DL---ELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKEVIDILFKP 193
                ++     Q+  +  F T++    NG+ + +A ++ EELR   P      D  + P
Sbjct: 128 TALLDKVVAEYNQMWMDGPFNTENLAFPNGILFHLADIWTEELRKVYPEDVPKAD-WYLP 187

Query: 194 FILSMAKLSDKVMLGK 207
           F  S  K S  V+L K
Sbjct: 188 FD-STIKSSHNVVLRK 200

BLAST of Cp4.1LG07g07670 vs. TrEMBL
Match: A0A0A0LGX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G062650 PE=4 SV=1)

HSP 1 Score: 904.4 bits (2336), Expect = 6.7e-260
Identity = 475/564 (84.22%), Postives = 510/564 (90.43%), Query Frame = 1

Query: 2   EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 61
           EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH
Sbjct: 3   EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 62

Query: 62  ADKLPVQTELINRLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
           ADK+PVQ+ELINRLASLLLHL+L LA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63  ADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122

Query: 122 HQFFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
           HQFFALLKK+SWDLELCRR VQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPL K
Sbjct: 123 HQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQK 182

Query: 182 EVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVVY 241
           EV+D+LFKPF+LSM KL DKV+LGKIKSNLFDV+LK GKQLLE RK G+D++S DD VVY
Sbjct: 183 EVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVY 242

Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
           GT+ LTN FS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK F SSGIEIS PDLQEQD
Sbjct: 243 GTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD 302

Query: 302 GDEVPTLVPISS-----EEISMADVDVSDEITDKALKKKKKTKKVSDGSGK---KKAKKA 361
           GDEVPTLVPISS      EIS+ DVDV  E TDKALKK+KK+KK +DGSGK   KKAKKA
Sbjct: 303 GDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKA 362

Query: 362 KKNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERV 421
           KK TNGISDLVS NT  NKD+ENIVVANGENSNNEQISDGNMITFDE+VISNLQMQFERV
Sbjct: 363 KKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFERV 422

Query: 422 AAEAEFGDNVMTPVISANGSVKKRKRAKKVDVQQTHDVVLPNQVDTEGNTAAKSGENSVK 481
           AAEA+FG + ++PVIS NGSVKKRKRAK V   Q HD  LP++   EGNTAAKS E SVK
Sbjct: 423 AAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKSVK 482

Query: 482 KVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 541
           KVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFPATTKRTKRRAV
Sbjct: 483 KVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 542

Query: 542 TMRAKKGVRSLPVKRLKKPKSKST 558
           +MR K GVRSLPVKRLKK KSKST
Sbjct: 543 SMRTKNGVRSLPVKRLKKLKSKST 566

BLAST of Cp4.1LG07g07670 vs. TrEMBL
Match: A0A067F3M5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008164mg PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 5.3e-156
Identity = 314/572 (54.90%), Postives = 407/572 (71.15%), Query Frame = 1

Query: 2   EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 61
           E+ E ++  +SLIK LAS NK TR+K L  ++K WLP QT +SD DMKKLWKGLFYCVWH
Sbjct: 3   EMGETEEVGSSLIKQLASCNKGTREKALNALLKNWLPNQTQISDDDMKKLWKGLFYCVWH 62

Query: 62  ADKLPVQTELINRLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
           ADKL  QT+LI  LAS++  L+LPLA  YFS FLLTMRREW GID LRLDKFYLL+RRF+
Sbjct: 63  ADKLAFQTQLIEFLASVITSLDLPLAIHYFSTFLLTMRREWTGIDGLRLDKFYLLVRRFL 122

Query: 122 HQFFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
             +F ++KKN WD+EL ++ + VL  R + +DDKF GNGVNY I SVF+EE+R FLPL K
Sbjct: 123 RYYFQIMKKNLWDIELVKKLMGVLVHRSWLSDDKFLGNGVNYHIVSVFVEEIRAFLPLRK 182

Query: 182 EVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVVY 241
           EV++ +F PF+  MAK+ DKV++GKIKSN+FDVL KMG++LL+ +K G +++S D++V+ 
Sbjct: 183 EVVEDIFGPFVSVMAKVQDKVLVGKIKSNVFDVLSKMGRRLLDVKKSGGEVDSSDEVVLL 242

Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDL---Q 301
           GTI +   FS  F+ELGSS +CCQ NRKVLF++HEE+ KLEK F SSG+EIS+PD+    
Sbjct: 243 GTIAIVLGFSGKFFELGSSVECCQGNRKVLFSLHEEFLKLEKDFGSSGVEISIPDVSVGD 302

Query: 302 EQDGDEVPTLVPISS-EEISMADVDVSD-EITDKALKKKKKTKKVSDGSGKK-KAKKAKK 361
           E + DEVP LVPISS  ++  +  DV++   +D+ L K+KK K  S G+ K  K  K KK
Sbjct: 303 EDEDDEVPNLVPISSYMDVDGSGDDVAEGAASDEVLNKRKKGKNASSGNDKNGKKSKKKK 362

Query: 362 NTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAA 421
             N +SD+ S  +   KDDENIV A   +S +EQ  D N I F+ESVISNLQMQFE+VAA
Sbjct: 363 KKNAVSDVGSETSLSGKDDENIVNATSNDSIDEQNHDTNFIPFNESVISNLQMQFEKVAA 422

Query: 422 EAEFGDNVMT----PVISANGS----VKKRKRAKKVDVQQTHDVVLPNQVDTEGNTAAKS 481
           E    DNV T    P   ANG+     KKRKR K  D +Q+ +     + D +    AKS
Sbjct: 423 EVGMEDNVDTACDLPQDRANGTNGTVSKKRKRVKNKDGKQSKNPESTREGDADDCLTAKS 482

Query: 482 GENSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKR 541
           GE S KKVRFSMK+NLVWKP +PLPP+SLRLPP+V PRGSALKKG+PPGP++E    +K+
Sbjct: 483 GEKSAKKVRFSMKSNLVWKPQSPLPPQSLRLPPSVAPRGSALKKGVPPGPVMEMSVASKK 542

Query: 542 TKRRAVTMRAKKGV---RSLPVKRLKKPKSKS 557
            K+RA +++  + V   ++  +K  +K KS S
Sbjct: 543 VKQRAKSVKKARKVIKIKNPTLKGARKLKSLS 574

BLAST of Cp4.1LG07g07670 vs. TrEMBL
Match: V4WI81_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010385mg PE=4 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 6.9e-156
Identity = 315/572 (55.07%), Postives = 406/572 (70.98%), Query Frame = 1

Query: 2   EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 61
           E+ E ++  +SLIK LAS NK TR+K L  ++K WLP QT +SD DMKKLWKGLFYCVWH
Sbjct: 55  EMGETEEVGSSLIKQLASCNKGTREKALNALLKNWLPNQTQISDDDMKKLWKGLFYCVWH 114

Query: 62  ADKLPVQTELINRLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
           ADKL  QT+LI  LAS++  L+LPLA  YFS FLLTMRREW GID LRLDKFYLL+RRF+
Sbjct: 115 ADKLAFQTQLIEFLASVITSLDLPLAIHYFSTFLLTMRREWTGIDGLRLDKFYLLVRRFL 174

Query: 122 HQFFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
             +F ++KKN WD+EL ++ + VL  R   +DDKF GNGVNY I SVF+EE+R FLPL K
Sbjct: 175 RYYFQIMKKNLWDIELVKKLMGVLVHRSLLSDDKFLGNGVNYHIVSVFVEEIRAFLPLRK 234

Query: 182 EVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVVY 241
           EV++ +F PF+  MAK+ DKV++GKIKSN+FDVL KMG++LL+ +K G +++S D++V+ 
Sbjct: 235 EVVEDIFGPFVSVMAKVQDKVLVGKIKSNVFDVLSKMGRRLLDVKKSGGEVDSSDEVVLL 294

Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDL---Q 301
           GTI +   FS  F+ELGSS +CCQ NRKVLF++HEE+ KLEK F SSG+EIS+PD+    
Sbjct: 295 GTIAIVLGFSGKFFELGSSVECCQGNRKVLFSLHEEFLKLEKDFGSSGVEISIPDVSVGD 354

Query: 302 EQDGDEVPTLVPISS-EEISMADVDVSD-EITDKALKKKKKTKKVSDGSGKK-KAKKAKK 361
           E + DEVP LVPISS  ++  +  DV++   +D+ L K KK KK S G+ K  K  K KK
Sbjct: 355 EDEDDEVPNLVPISSYMDVDGSGDDVAEGAASDEVLNKCKKGKKASSGNDKNGKKSKKKK 414

Query: 362 NTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAA 421
             N +SD+ S  +   KDDENIV A   +S +EQ  D N I F+ESVISNLQMQFE+VAA
Sbjct: 415 KKNAVSDVGSETSLSGKDDENIVNATSNDSIDEQNHDTNFIPFNESVISNLQMQFEKVAA 474

Query: 422 EAEFGDNVMT----PVISANGS----VKKRKRAKKVDVQQTHDVVLPNQVDTEGNTAAKS 481
           E    DNV T    P   ANG+     KKRKR K  D +Q+ +     + D +    AKS
Sbjct: 475 EVGMEDNVDTACDLPQDRANGTNGTVSKKRKRVKNKDGKQSKNPESTREGDADDCLTAKS 534

Query: 482 GENSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKR 541
           GE S KKVRFSMK+NLVWKP +PLPP+SLRLPP+V PRGSALKKG+PPGP++E    +K+
Sbjct: 535 GEKSAKKVRFSMKSNLVWKPQSPLPPQSLRLPPSVAPRGSALKKGVPPGPVMEMSVASKK 594

Query: 542 TKRRAVTMRAKKGV---RSLPVKRLKKPKSKS 557
            K+RA +++  + V   ++  +K  +K KS S
Sbjct: 595 VKQRAKSVKKARKVIKIKNPTLKGARKLKSLS 626

BLAST of Cp4.1LG07g07670 vs. TrEMBL
Match: A0A061FFL5_THECC (Ribosomal RNA processing protein 1 B, putative OS=Theobroma cacao GN=TCM_034656 PE=4 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 4.5e-155
Identity = 309/563 (54.88%), Postives = 405/563 (71.94%), Query Frame = 1

Query: 12  SLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKLPVQTEL 71
           +LIK LA+ +K+TRD+ +R ++ TWLP+Q  +SD +MK+LWKGLFYCVWHADKLP Q++L
Sbjct: 11  TLIKQLAACDKSTRDRAVRSLLHTWLPSQAEVSDEEMKRLWKGLFYCVWHADKLPAQSDL 70

Query: 72  INRLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALLKKN 131
           I +L+S+L  LE  L+ QYFS+FLLTMRREW GID LRLDKFYLLIRRF++ FF +LKK 
Sbjct: 71  IEKLSSVLPKLETGLSLQYFSVFLLTMRREWTGIDKLRLDKFYLLIRRFLNCFFVMLKKW 130

Query: 132 SWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKEVIDILFKPF 191
           SWDL+  RRS++VL +  F  DDKF GNGVNY IAS+FLEE+RPFLP+ KEV+++L +PF
Sbjct: 131 SWDLDFTRRSIRVLVDGTFLADDKFQGNGVNYHIASIFLEEIRPFLPVKKEVVEVLLEPF 190

Query: 192 ILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVVYGTIPLTNLFS 251
           +  M K+ DKV++GKI+SN+FDV +KMG++ LE ++ G++++  +D+VV GTI L   FS
Sbjct: 191 VGIMGKVGDKVLVGKIRSNVFDVFVKMGRRFLELKRSGDEVDEGEDLVVLGTISLLMGFS 250

Query: 252 STFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQE-QDGDEVPTLVP 311
           + FYELGSS DCCQ NRKV+  +HEE+ KLEK     GI++S+P+  E  + DEVP L+P
Sbjct: 251 AKFYELGSSADCCQGNRKVVLGLHEEFLKLEKDLTLLGIDVSIPEPNEGGEEDEVPELIP 310

Query: 312 ISSEEISMADVDVSDEITD-----------KALKKKKKTKKVSDGSGKKKAKKAKKNTNG 371
           I+SE     +VD SD +++           KALKK KK KK + GSG KK KK K     
Sbjct: 311 IASE----MEVDDSDGVSEPAEVNANGSAKKALKKSKKAKKATRGSG-KKTKKCKNAECS 370

Query: 372 ISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEF 431
            +D         ++++ +V A   NS+ EQ  DG+ ITF ESVISNLQ+QFE+VAAE   
Sbjct: 371 PAD---------QENDVMVPAESANSSIEQNGDGHSITFTESVISNLQLQFEKVAAEVGL 430

Query: 432 GDNVMT--PVISANGSV-KKRKRAKKVDVQQTHDVVLPNQVDTEGNTAAKSGENSVKKVR 491
             +V +   +   NG+  KKRKR K VD Q++ +  L NQ D EG   AK+GE S K+VR
Sbjct: 431 DGDVASACDLPKVNGAASKKRKRVKSVDGQKSQNGELTNQGDGEGGGTAKTGEKSTKRVR 490

Query: 492 FSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVTMR 551
           FSMKNNLVWKPH+PLPP+SLRLPP+VTPRGSALKKGIPPGPI E P  TK+ K+     +
Sbjct: 491 FSMKNNLVWKPHSPLPPQSLRLPPSVTPRGSALKKGIPPGPITEVPPLTKKVKKAKSVKK 550

Query: 552 AKKGVRSL--PVKRLKKPKSKST 558
           A+K ++S+   VKR KK KS S+
Sbjct: 551 ARKVIKSMYPLVKRTKKLKSVSS 559

BLAST of Cp4.1LG07g07670 vs. TrEMBL
Match: F6GXI5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00510 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 8.7e-151
Identity = 309/558 (55.38%), Postives = 398/558 (71.33%), Query Frame = 1

Query: 14  IKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKLPVQTELIN 73
           I+ LAS +K+TRD+ LR ++ TWLP+Q+ +S+ DMKK+WKGLFY +WHADK PVQ++LI+
Sbjct: 6   IRHLASCDKSTRDEALR-LLHTWLPSQSQVSEEDMKKVWKGLFYSLWHADKTPVQSDLID 65

Query: 74  RLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALLKKNSW 133
           RLASLL  L LPL+  YFS+FLLTMRREW GIDALRLDKFYLLIR+FM+ FF +LK NSW
Sbjct: 66  RLASLLTTLNLPLSIHYFSVFLLTMRREWPGIDALRLDKFYLLIRKFMYNFFLVLKNNSW 125

Query: 134 DLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKEVIDILFKPFIL 193
           DLE+ +R + VLE      D +F GNGV Y +ASVFLEELRPFLP+ +E++ +LF+PF+ 
Sbjct: 126 DLEISKRLIVVLE----LEDGRFSGNGVGYHVASVFLEELRPFLPVRREIVSVLFEPFVE 185

Query: 194 SMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVVYGTIPLTNLFSST 253
            M + +DKV++GK+KSN+FD L++MG++LLE ++ G D   D D V +GT+ +   FS  
Sbjct: 186 VMGRSADKVLVGKVKSNVFDFLVRMGQRLLEVKRLGGDEGGDGDAVAFGTLAVGFGFSKK 245

Query: 254 FYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQDGDEVPTLVPISS 313
           FYELGS+PDC Q NRKVLF +HE + KLEK F S+ IEIS+P+    D DE+PTL+PI+ 
Sbjct: 246 FYELGSAPDCLQGNRKVLFGLHEGFAKLEKDFASARIEISIPEDDNCDEDELPTLIPIAQ 305

Query: 314 EEISMADVDVSDEITD--------KALKKKKKTKKVSDGSGKKKAKKAKKNTNGISDLVS 373
            E   A+V+ + E+ +        KA KK KK KKVS GS KK   K KK+     DLVS
Sbjct: 306 PE---AEVEGASEVVESVGNGSARKASKKSKKLKKVSGGSDKKNKMKKKKS----PDLVS 365

Query: 374 NNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFGDNVM- 433
            N+   + +EN+ V N ENSN E  SD ++I F+ESVISNLQMQFE+VAAE   G+ +M 
Sbjct: 366 ENSATVEYNENVTVPNDENSNCEPSSDQSLIDFNESVISNLQMQFEKVAAEVGLGNELMG 425

Query: 434 ---TPVISANGSV-KKRKRAKKVDVQQTHDVVLPNQVDTEGNTAAKSGENSVKKVRFSMK 493
              +P    NG+V KKRKRAK       HDV   +Q D E +  AKS   S KKV+FS+K
Sbjct: 426 LCDSPTRPVNGTVSKKRKRAKN---NNEHDV--SSQGDDESSALAKSKGKSAKKVKFSIK 485

Query: 494 NNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVTMRAKKG 553
           NNLVWKP +PLPP+SLRLPP+VTPRGSALKKGIPPGP+ E P T K  KR     + + G
Sbjct: 486 NNLVWKPQSPLPPQSLRLPPSVTPRGSALKKGIPPGPVREMPQTKKVKKRAKSLKKGRNG 545

Query: 554 VRSL--PVKRLKKPKSKS 557
           ++S+   +KRLKK +S S
Sbjct: 546 IKSISPAIKRLKKLQSLS 546

BLAST of Cp4.1LG07g07670 vs. TAIR10
Match: AT5G20600.1 (AT5G20600.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 462.6 bits (1189), Expect = 3.4e-130
Identity = 266/555 (47.93%), Postives = 361/555 (65.05%), Query Frame = 1

Query: 7   DQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKLP 66
           ++D  SLIK LAS  ++ RD++LR +++TWLP QT +SD DMKKLW+G+FYCVWHADK  
Sbjct: 17  EEDCKSLIKKLASCKQSIRDRSLRTVLRTWLPEQTEISDEDMKKLWQGIFYCVWHADKSL 76

Query: 67  VQTELINRLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFA 126
            Q+ELI+RL+S L  L LPL+  YF++FL TMRREW+ ID LRLDKFYLLIRRF+H FF+
Sbjct: 77  YQSELIDRLSSALQSLPLPLSIHYFTVFLFTMRREWSRIDRLRLDKFYLLIRRFLHGFFS 136

Query: 127 LLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKEVIDI 186
           L+  NSWDLE  RR + +L +     DDKF GNGVNY I S F+EELRPFLPL KEV+++
Sbjct: 137 LIDSNSWDLEFTRRLMGILFDGTLLADDKFQGNGVNYHITSAFVEELRPFLPLRKEVLEL 196

Query: 187 LFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGED-INSDDDIVVYGTIP 246
           LF PF+  M  ++DK+++GKIKSNLFD LLKMGK+LL  ++ G+D +  DDD+VV G+I 
Sbjct: 197 LFAPFVKIMGVVNDKILVGKIKSNLFDELLKMGKKLLIIKQSGDDAVPEDDDVVVLGSIA 256

Query: 247 LTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQDGDEV 306
           L+  F+  FYELGSSP+C Q NRK++FA+H+E+ +LEK   SS IE+S+ +      DEV
Sbjct: 257 LSMEFAKRFYELGSSPECHQGNRKLIFALHKEFLQLEKDMSSSSIEVSIVEASRPGNDEV 316

Query: 307 PTLVPISSEEISMADVDVSDEITDKALKKKKKTKKVSDGSGKKKAKKAKKNTNGISDLVS 366
           P  VP+S    ++  V  S +I       KKK        G KK  K KK++     ++ 
Sbjct: 317 PESVPVSESNTNV--VSKSKKIVANGSSSKKK--------GLKKCSKTKKDSVKKGAVMD 376

Query: 367 NNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFGDNVMT 426
           +   +   DE                     +FDE++IS+L+ +FE++A+E     + + 
Sbjct: 377 SVVDLGNKDE---------------------SFDETMISDLRQEFEKIASEMSPSKSEVA 436

Query: 427 PV------ISANGSVKKRKRAKKVDVQQTHDVVLPNQVDTEGNTAAKSGENSVKKVRFSM 486
            V      +S +   KKRKR  K + Q    V   N+   E + A  S E S K+VRF+M
Sbjct: 437 SVCDVAEPVSVSKKTKKRKRENKGEEQ----VSTVNRDAAETSLAGPSSEKSSKRVRFAM 496

Query: 487 KNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVTMRAKK 546
           KNNLVWKPH PLPP+ LR PP+ TPRGSALK+GIP GP+ E    +++TK++ V   A++
Sbjct: 497 KNNLVWKPHCPLPPQDLRCPPSATPRGSALKQGIPAGPVREL--ASRKTKKK-VKPAARR 531

Query: 547 GVRSLPVKRLKKPKS 555
           GV+S  +K LKK  S
Sbjct: 557 GVKS--IKNLKKKLS 531

BLAST of Cp4.1LG07g07670 vs. NCBI nr
Match: gi|659069592|ref|XP_008450828.1| (PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 917.1 bits (2369), Expect = 1.4e-263
Identity = 481/564 (85.28%), Postives = 515/564 (91.31%), Query Frame = 1

Query: 2   EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 61
           EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH
Sbjct: 3   EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 62

Query: 62  ADKLPVQTELINRLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
           ADK+PVQ+ELINRLASLLLHL+L LA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63  ADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122

Query: 122 HQFFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
           HQFFALLKK+SWDLELCR  VQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL K
Sbjct: 123 HQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQK 182

Query: 182 EVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVVY 241
           EV+D+LFKPF+LSMAKL DKV+ GKIKSNLFDV+LKMGKQLLE RK G+DI+S DD  VY
Sbjct: 183 EVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTAVY 242

Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
           GTI LTN FS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK F SSGIEIS PDLQEQD
Sbjct: 243 GTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD 302

Query: 302 GDEVPTLVPISSE-----EISMADVDVSDEITDKALKKKKKTKKVSDGSGK---KKAKKA 361
           GDEVPTLVPI SE     EISM DVDV  E TDKALKK+K++KK +DGSGK   KKAKKA
Sbjct: 303 GDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAKKA 362

Query: 362 KKNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERV 421
           KK TNGISDLVS N+  NKD+ENIVVANGENSNNEQISDGNMITFDE+VISNLQMQFE+V
Sbjct: 363 KKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFEKV 422

Query: 422 AAEAEFGDNVMTPVISANGSVKKRKRAKKVDVQQTHDVVLPNQVDTEGNTAAKSGENSVK 481
           AAEA+FGD++++PVIS NGSVKKRKRAK VD  Q HDV LP++   EGNTAAKS E SVK
Sbjct: 423 AAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKSVK 482

Query: 482 KVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 541
           KVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFPATTKRTKRRAV
Sbjct: 483 KVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 542

Query: 542 TMRAKKGVRSLPVKRLKKPKSKST 558
           +MR KKGVRSLPVKRLKK KSKST
Sbjct: 543 SMRTKKGVRSLPVKRLKKLKSKST 566

BLAST of Cp4.1LG07g07670 vs. NCBI nr
Match: gi|449465344|ref|XP_004150388.1| (PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 904.4 bits (2336), Expect = 9.6e-260
Identity = 475/564 (84.22%), Postives = 510/564 (90.43%), Query Frame = 1

Query: 2   EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 61
           EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH
Sbjct: 3   EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 62

Query: 62  ADKLPVQTELINRLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
           ADK+PVQ+ELINRLASLLLHL+L LA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63  ADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122

Query: 122 HQFFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
           HQFFALLKK+SWDLELCRR VQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPL K
Sbjct: 123 HQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQK 182

Query: 182 EVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVVY 241
           EV+D+LFKPF+LSM KL DKV+LGKIKSNLFDV+LK GKQLLE RK G+D++S DD VVY
Sbjct: 183 EVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVY 242

Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
           GT+ LTN FS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK F SSGIEIS PDLQEQD
Sbjct: 243 GTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD 302

Query: 302 GDEVPTLVPISS-----EEISMADVDVSDEITDKALKKKKKTKKVSDGSGK---KKAKKA 361
           GDEVPTLVPISS      EIS+ DVDV  E TDKALKK+KK+KK +DGSGK   KKAKKA
Sbjct: 303 GDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKA 362

Query: 362 KKNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERV 421
           KK TNGISDLVS NT  NKD+ENIVVANGENSNNEQISDGNMITFDE+VISNLQMQFERV
Sbjct: 363 KKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFERV 422

Query: 422 AAEAEFGDNVMTPVISANGSVKKRKRAKKVDVQQTHDVVLPNQVDTEGNTAAKSGENSVK 481
           AAEA+FG + ++PVIS NGSVKKRKRAK V   Q HD  LP++   EGNTAAKS E SVK
Sbjct: 423 AAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKSVK 482

Query: 482 KVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 541
           KVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFPATTKRTKRRAV
Sbjct: 483 KVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 542

Query: 542 TMRAKKGVRSLPVKRLKKPKSKST 558
           +MR K GVRSLPVKRLKK KSKST
Sbjct: 543 SMRTKNGVRSLPVKRLKKLKSKST 566

BLAST of Cp4.1LG07g07670 vs. NCBI nr
Match: gi|659069594|ref|XP_008450836.1| (PREDICTED: ribosomal RNA processing protein 1 homolog B isoform X2 [Cucumis melo])

HSP 1 Score: 629.0 bits (1621), Expect = 7.8e-177
Identity = 329/388 (84.79%), Postives = 352/388 (90.72%), Query Frame = 1

Query: 2   EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 61
           EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH
Sbjct: 3   EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 62

Query: 62  ADKLPVQTELINRLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
           ADK+PVQ+ELINRLASLLLHL+L LA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63  ADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122

Query: 122 HQFFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
           HQFFALLKK+SWDLELCR  VQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL K
Sbjct: 123 HQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQK 182

Query: 182 EVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVVY 241
           EV+D+LFKPF+LSMAKL DKV+ GKIKSNLFDV+LKMGKQLLE RK G+DI+S DD  VY
Sbjct: 183 EVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTAVY 242

Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
           GTI LTN FS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK F SSGIEIS PDLQEQD
Sbjct: 243 GTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD 302

Query: 302 GDEVPTLVPISSE-----EISMADVDVSDEITDKALKKKKKTKKVSDGSGK---KKAKKA 361
           GDEVPTLVPI SE     EISM DVDV  E TDKALKK+K++KK +DGSGK   KKAKKA
Sbjct: 303 GDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAKKA 362

Query: 362 KKNTNGISDLVSNNTHMNKDDENIVVAN 382
           KK TNGISDLVS N+  NKD+ENIVVAN
Sbjct: 363 KKTTNGISDLVSENSPANKDNENIVVAN 390

BLAST of Cp4.1LG07g07670 vs. NCBI nr
Match: gi|778667662|ref|XP_011648968.1| (PREDICTED: ribosomal RNA processing protein 1 homolog B isoform X2 [Cucumis sativus])

HSP 1 Score: 627.5 bits (1617), Expect = 2.3e-176
Identity = 326/388 (84.02%), Postives = 352/388 (90.72%), Query Frame = 1

Query: 2   EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 61
           EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH
Sbjct: 3   EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 62

Query: 62  ADKLPVQTELINRLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
           ADK+PVQ+ELINRLASLLLHL+L LA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63  ADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122

Query: 122 HQFFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
           HQFFALLKK+SWDLELCRR VQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPL K
Sbjct: 123 HQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQK 182

Query: 182 EVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVVY 241
           EV+D+LFKPF+LSM KL DKV+LGKIKSNLFDV+LK GKQLLE RK G+D++S DD VVY
Sbjct: 183 EVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVY 242

Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
           GT+ LTN FS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK F SSGIEIS PDLQEQD
Sbjct: 243 GTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD 302

Query: 302 GDEVPTLVPISS-----EEISMADVDVSDEITDKALKKKKKTKKVSDGSGK---KKAKKA 361
           GDEVPTLVPISS      EIS+ DVDV  E TDKALKK+KK+KK +DGSGK   KKAKKA
Sbjct: 303 GDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKA 362

Query: 362 KKNTNGISDLVSNNTHMNKDDENIVVAN 382
           KK TNGISDLVS NT  NKD+ENIVVAN
Sbjct: 363 KKTTNGISDLVSENTPANKDNENIVVAN 390

BLAST of Cp4.1LG07g07670 vs. NCBI nr
Match: gi|645234478|ref|XP_008223829.1| (PREDICTED: ribosomal RNA processing protein 1 homolog [Prunus mume])

HSP 1 Score: 576.6 bits (1485), Expect = 4.6e-161
Identity = 330/573 (57.59%), Postives = 411/573 (71.73%), Query Frame = 1

Query: 1   MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVW 60
           ME     ++  SLIK LAS NK+ RD+ LRV++KTWLPTQ +L D  MKKLWKGLFYCVW
Sbjct: 16  MEAETATEEGLSLIKQLASCNKSGRDRALRVLLKTWLPTQLNLHDDHMKKLWKGLFYCVW 75

Query: 61  HADKLPVQTELINRLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRF 120
           HADK+PVQT+LI+RL+SL+L L LPL+  YFS FLLTMRREW+GIDALRLDKFYLLIRRF
Sbjct: 76  HADKVPVQTQLIDRLSSLVLSLHLPLSIHYFSAFLLTMRREWSGIDALRLDKFYLLIRRF 135

Query: 121 MHQFFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG 180
           M  FFAL++ N WDLEL +R + VLEE  FF DDKF GNGVNY IASVFLEELRP+LPL 
Sbjct: 136 MASFFALMRNNLWDLELVKRLMGVLEEVTFFADDKFLGNGVNYHIASVFLEELRPYLPLK 195

Query: 181 KEVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVV 240
            EV++++   FI   AK+ DKV+LGKI+SN FD LL  GK+LLE +K GED+ S D+++V
Sbjct: 196 AEVLEVVLVSFIRVSAKVPDKVLLGKIRSNTFDALLGAGKRLLEVKKLGEDVGSGDEVMV 255

Query: 241 YGTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQ 300
           +G+I LT  FSS FYELGSSP+CCQ NRKVLF +HEE+ KLEK   SSGIEIS+PD+   
Sbjct: 256 FGSIALTMGFSSKFYELGSSPECCQGNRKVLFGLHEEFLKLEKELESSGIEISIPDVVYN 315

Query: 301 DGDEVPTLVPISSEEISMADVDVSDEI-----TDKALKKKKKTKK---VSDGSGKKKAKK 360
           D + VPTLVP++ EE+ + + +  + +       K LKK K  +K    +D   +KK KK
Sbjct: 316 DDEVVPTLVPLAGEEMEVGNSEAGEVVMVNGSAGKLLKKCKNREKDTGAADTKAEKKKKK 375

Query: 361 AKKN--TNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQF 420
            KKN   N I D  S  +  ++++EN VVANGE+S+N+Q +D N +  D++VISNLQMQF
Sbjct: 376 KKKNKKENEILDSDSEKSSTDRENEN-VVANGESSDNQQATDENAVKLDDNVISNLQMQF 435

Query: 421 ERVAAEAEFGDNVMT----PVISANGSV-KKRKRAKKVDVQQTHDVVLPNQVDTEGNTAA 480
           E++AAEA    +V +    P  S  G V KKRKR KK             + D EG T A
Sbjct: 436 EKIAAEAGLDGDVPSACDLPTASDKGPVSKKRKRVKKA-----------VEEDVEGGTNA 495

Query: 481 KSGENSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATT 540
           KSGE S KKV+FSMK+NLVWKP +PLPP+ LR+PP+ TPRGSALKKG+PPGPI E P  T
Sbjct: 496 KSGEKSAKKVKFSMKSNLVWKPQSPLPPQDLRVPPSATPRGSALKKGVPPGPIREMPLPT 555

Query: 541 KRTKR-RAVTMRAKKGVRSLPVKRLKKPKSKST 558
           K+ K  R VT  AKK  ++  +KR+KK KS+ T
Sbjct: 556 KKVKMVRVVT--AKKARKA--IKRIKKLKSRPT 572

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RRP1B_MOUSE1.8e-2434.78Ribosomal RNA processing protein 1 homolog B OS=Mus musculus GN=Rrp1b PE=1 SV=2[more]
RRP1B_HUMAN3.8e-2234.76Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens GN=RRP1B PE=1 SV=3[more]
RRP1_HUMAN7.9e-2030.36Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens GN=RRP1 PE=1 SV=1[more]
RRP1_MOUSE1.3e-1930.77Ribosomal RNA processing protein 1 homolog A OS=Mus musculus GN=Rrp1 PE=1 SV=2[more]
RRP1_SCHPO1.8e-1936.73Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain ... [more]
Match NameE-valueIdentityDescription
A0A0A0LGX3_CUCSA6.7e-26084.22Uncharacterized protein OS=Cucumis sativus GN=Csa_2G062650 PE=4 SV=1[more]
A0A067F3M5_CITSI5.3e-15654.90Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008164mg PE=4 SV=1[more]
V4WI81_9ROSI6.9e-15655.07Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010385mg PE=4 SV=1[more]
A0A061FFL5_THECC4.5e-15554.88Ribosomal RNA processing protein 1 B, putative OS=Theobroma cacao GN=TCM_034656 ... [more]
F6GXI5_VITVI8.7e-15155.38Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00510 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT5G20600.13.4e-13047.93 FUNCTIONS IN: molecular_function unknown[more]
Match NameE-valueIdentityDescription
gi|659069592|ref|XP_008450828.1|1.4e-26385.28PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1 [Cucumis melo][more]
gi|449465344|ref|XP_004150388.1|9.6e-26084.22PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1 [Cucumis sativu... [more]
gi|659069594|ref|XP_008450836.1|7.8e-17784.79PREDICTED: ribosomal RNA processing protein 1 homolog B isoform X2 [Cucumis melo... [more]
gi|778667662|ref|XP_011648968.1|2.3e-17684.02PREDICTED: ribosomal RNA processing protein 1 homolog B isoform X2 [Cucumis sati... [more]
gi|645234478|ref|XP_008223829.1|4.6e-16157.59PREDICTED: ribosomal RNA processing protein 1 homolog [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Cellular Component
TermDefinition
GO:0030688preribosome, small subunit precursor
Vocabulary: INTERPRO
TermDefinition
IPR010301Nop52
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006364 rRNA processing
cellular_component GO:0030688 preribosome, small subunit precursor
cellular_component GO:0005829 cytosol
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g07670.1Cp4.1LG07g07670.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010301Nucleolar, Nop52PANTHERPTHR13026NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52coord: 13..556
score: 2.1E
IPR010301Nucleolar, Nop52PFAMPF05997Nop52coord: 12..213
score: 7.2
NoneNo IPR availablePANTHERPTHR13026:SF0RIBOSOMAL RNA PROCESSING PROTEIN 1 HOMOLOGcoord: 13..556
score: 2.1E