Carg19811 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19811
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ribosomal RNA processing protein 1 homolog
Location	Cucurbita_argyrosperma_scaffold_067 : 136622 .. 138394 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGGTGGTTGAAGGAGATCAATATTTTGTTTCTTTGGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGAGACAAGACCCTCCGTGTAATCATCAAGACATGGCTTCCGACTCAAACGAGCCTCTCCGATGGCGATATGAAGAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCGGACAAGGCTCCTGTTCAATCTGAGCTTATTAATCGTCTCGCTTCCCTGCTTCTCCATCTCGACCTCCCGCTAGCTGTTCAATACTTCTCTGTTTTTCTTCTCACCATGCGTCGTGAATGGGCCGGCATTGATGCGCTCAGGTTAGATAAGTTTTACCTTTTGATTCGTAGATTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTATGTCGTCGTTCGGTTCAAGTTTTGGAAGAAAGGGTTTTTTTCACTGATGATAAGTTTCATGGGAGTGGTGTTAATTACCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTATTGATATTCTGTTCAAGCCATTCATTTATTCCATGGCTAAGCTGTCAGATAAAGTGTTGTTGGGAAAAATTAAGTCTAGTCTTTTTGATGTGATTCTTAAAATGGGGAAGCAATTACTTGAGCGTCGAAAATGTGGAGAGGATGTTGATTCTGGTGATGATATGGTTGTGTTGGGTTCAATTTCATTGACAAATTTATTCTCAACTACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGGTACTGTTTGCCATGCATGAAGAGTATCAGAAGTTGGAGAAAGATATTATCTCATCGGGGATTGAGATTTCGTTTCCAGATCTTCAAGAACAAGACGTGGATGAAGTGCCTACTTTAGTTCCTGTTTCCAGTGAAGGAGAGGCACCTTCAGAAATTTCCGCTGTTGATGTTGATATCACTGCTGAATCCACTGATAAGGAACATAAAAAGAAAAAGAAGCATAAAAAGGCCACTCCTTCAGAAATTTCCATGCTTGATGTTGATCTTACTGCTGAATCCACTGACAAGCCACTTAAAAAGCAAAAGAAGAATAAAAAGGCCACTGATGGCAGCGGCAAGAAGAAAACAAAGAAGACCACAAACGCTAGTTTTGATCTTGTTTCTGAAAATACTACTGTGAATAAGGACAATGAGAATATAGTTGCTTCTAACGGTGAGAATTCTAATAATGAACAGATTGGTGATGGAAATATGATAGCCTTGGATGAATCTGTGATATCAAACCTTCAGATTCAATTTGAGAGGGTTGCTTCTGAAGCTGATTTTGGAGACAATCTTGTGAGCCCTGTAATATCAACCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGATGGGCTGCAGAAACATGATGTAGTACTTCCTGGCGAAGTAGACGCTGAAGGAAATACGGCTGTGAAAAGTGGAGAGAAGAGTGTTAAGAAGGTAAGGTTTTCCATGAAAAATAACTTGGTGTGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCTGCTACAGCTAAAAGGACAAAAAGGAGAGCTGTTGCAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTGTGAAGAAATTGAAATCTAGGAGTACTTAG

mRNA sequence

ATGGAGGAGGTGGTTGAAGGAGATCAATATTTTGTTTCTTTGGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGAGACAAGACCCTCCGTGTAATCATCAAGACATGGCTTCCGACTCAAACGAGCCTCTCCGATGGCGATATGAAGAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCGGACAAGGCTCCTGTTCAATCTGAGCTTATTAATCGTCTCGCTTCCCTGCTTCTCCATCTCGACCTCCCGCTAGCTGTTCAATACTTCTCTGTTTTTCTTCTCACCATGCGTCGTGAATGGGCCGGCATTGATGCGCTCAGGTTAGATAAGTTTTACCTTTTGATTCGTAGATTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTATGTCGTCGTTCGGTTCAAGTTTTGGAAGAAAGGGTTTTTTTCACTGATGATAAGTTTCATGGGAGTGGTGTTAATTACCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTATTGATATTCTGTTCAAGCCATTCATTTATTCCATGGCTAAGCTGTCAGATAAAGTGTTGTTGGGAAAAATTAAGTCTAGTCTTTTTGATGTGATTCTTAAAATGGGGAAGCAATTACTTGAGCGTCGAAAATGTGGAGAGGATGTTGATTCTGGTGATGATATGGTTGTGTTGGGTTCAATTTCATTGACAAATTTATTCTCAACTACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGGTACTGTTTGCCATGCATGAAGAGTATCAGAAGTTGGAGAAAGATATTATCTCATCGGGGATTGAGATTTCGTTTCCAGATCTTCAAGAACAAGACGTGGATGAAGTGCCTACTTTAGTTCCTGTTTCCAGTGAAGGAGAGGCACCTTCAGAAATTTCCGCTGTTGATGTTGATATCACTGCTGAATCCACTGATAAGGAACATAAAAAGAAAAAGAAGCATAAAAAGGCCACTCCTTCAGAAATTTCCATGCTTGATGTTGATCTTACTGCTGAATCCACTGACAAGCCACTTAAAAAGCAAAAGAAGAATAAAAAGGCCACTGATGGCAGCGGCAAGAAGAAAACAAAGAAGACCACAAACGCTAGTTTTGATCTTGTTTCTGAAAATACTACTGTGAATAAGGACAATGAGAATATAGTTGCTTCTAACGGTGAGAATTCTAATAATGAACAGATTGGTGATGGAAATATGATAGCCTTGGATGAATCTGTGATATCAAACCTTCAGATTCAATTTGAGAGGGTTGCTTCTGAAGCTGATTTTGGAGACAATCTTGTGAGCCCTGTAATATCAACCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGATGGGCTGCAGAAACATGATGTAGTACTTCCTGGCGAAGTAGACGCTGAAGGAAATACGGCTGTGAAAAGTGGAGAGAAGAGTGTTAAGAAGGTAAGGTTTTCCATGAAAAATAACTTGGTGTGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCTGCTACAGCTAAAAGGACAAAAAGGAGAGCTGTTGCAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTGTGAAGAAATTGAAATCTAGGAGTACTTAG

Coding sequence (CDS)

ATGGAGGAGGTGGTTGAAGGAGATCAATATTTTGTTTCTTTGGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGAGACAAGACCCTCCGTGTAATCATCAAGACATGGCTTCCGACTCAAACGAGCCTCTCCGATGGCGATATGAAGAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCGGACAAGGCTCCTGTTCAATCTGAGCTTATTAATCGTCTCGCTTCCCTGCTTCTCCATCTCGACCTCCCGCTAGCTGTTCAATACTTCTCTGTTTTTCTTCTCACCATGCGTCGTGAATGGGCCGGCATTGATGCGCTCAGGTTAGATAAGTTTTACCTTTTGATTCGTAGATTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTATGTCGTCGTTCGGTTCAAGTTTTGGAAGAAAGGGTTTTTTTCACTGATGATAAGTTTCATGGGAGTGGTGTTAATTACCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTATTGATATTCTGTTCAAGCCATTCATTTATTCCATGGCTAAGCTGTCAGATAAAGTGTTGTTGGGAAAAATTAAGTCTAGTCTTTTTGATGTGATTCTTAAAATGGGGAAGCAATTACTTGAGCGTCGAAAATGTGGAGAGGATGTTGATTCTGGTGATGATATGGTTGTGTTGGGTTCAATTTCATTGACAAATTTATTCTCAACTACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGGTACTGTTTGCCATGCATGAAGAGTATCAGAAGTTGGAGAAAGATATTATCTCATCGGGGATTGAGATTTCGTTTCCAGATCTTCAAGAACAAGACGTGGATGAAGTGCCTACTTTAGTTCCTGTTTCCAGTGAAGGAGAGGCACCTTCAGAAATTTCCGCTGTTGATGTTGATATCACTGCTGAATCCACTGATAAGGAACATAAAAAGAAAAAGAAGCATAAAAAGGCCACTCCTTCAGAAATTTCCATGCTTGATGTTGATCTTACTGCTGAATCCACTGACAAGCCACTTAAAAAGCAAAAGAAGAATAAAAAGGCCACTGATGGCAGCGGCAAGAAGAAAACAAAGAAGACCACAAACGCTAGTTTTGATCTTGTTTCTGAAAATACTACTGTGAATAAGGACAATGAGAATATAGTTGCTTCTAACGGTGAGAATTCTAATAATGAACAGATTGGTGATGGAAATATGATAGCCTTGGATGAATCTGTGATATCAAACCTTCAGATTCAATTTGAGAGGGTTGCTTCTGAAGCTGATTTTGGAGACAATCTTGTGAGCCCTGTAATATCAACCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGATGGGCTGCAGAAACATGATGTAGTACTTCCTGGCGAAGTAGACGCTGAAGGAAATACGGCTGTGAAAAGTGGAGAGAAGAGTGTTAAGAAGGTAAGGTTTTCCATGAAAAATAACTTGGTGTGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCTGCTACAGCTAAAAGGACAAAAAGGAGAGCTGTTGCAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTGTGAAGAAATTGAAATCTAGGAGTACTTAG

Protein sequence

MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPLQKEVIDILFKPFIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGEDVDSGDDMVVLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQEQDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKEHKKKKKHKKATPSEISMLDVDLTAESTDKPLKKQKKNKKATDGSGKKKTKKTTNASFDLVSENTTVNKDNENIVASNGENSNNEQIGDGNMIALDESVISNLQIQFERVASEADFGDNLVSPVISTNGSVKKRKRAKNVDGLQKHDVVLPGEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSRST

Homology

[Close]

BLAST of Carg19811 vs. NCBI nr
Match: XP_023546269.1 (ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_023546270.1 ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_023546272.1 ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 986.1 bits (2548), Expect = 5.2e-284
Identity = 557/590 (94.41%), Postives = 561/590 (95.08%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKF GSGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFPGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDILFKPFIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGEDVDSGDDMV 240
           QKEVIDILFKPFIYSMAKLSDKVLLGKIKS+LFDVILKMGKQLLERRKCGEDVDSGDDMV
Sbjct: 181 QKEVIDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSGDDMV 240

Query: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKEHKKKKKHKKAXXXXXXXXXXXXX 360
           QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDK HKKKKK+   XXXXXXXXXXXXX
Sbjct: 301 QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKAHKKKKKNXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXSGKKKTKKTTNASFDLVSENTTVNKDNENIVASNGENSNN 420
           XXXXXXXXXXXXXXXXXXX SG                     NKDNENIVASNGENSNN
Sbjct: 361 XXXXXXXXXXXXXXXXXXXGSGXXXXXXXXXXXXXXXXXXXXXNKDNENIVASNGENSNN 420

Query: 421 EQIGDGNMIALDESVISNLQIQFERVASEADFGDNLVSPVISTNGSVKKRKRAKNVDGLQ 480
           EQI DGNMIALDESVISNLQIQFERVASEADFGDNL+SPVISTNGSVKKRKRAKNVDGLQ
Sbjct: 421 EQISDGNMIALDESVISNLQIQFERVASEADFGDNLLSPVISTNGSVKKRKRAKNVDGLQ 480

Query: 481 KHDVVLPGEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHDVVLP EVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSRST 591
           ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKS+ST
Sbjct: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 590

[Close]

BLAST of Carg19811 vs. NCBI nr
Match: XP_022929687.1 (ribosomal RNA processing protein 1 homolog [Cucurbita moschata] >XP_022929688.1 ribosomal RNA processing protein 1 homolog [Cucurbita moschata])

HSP 1 Score: 984.6 bits (2544), Expect = 1.5e-283
Identity = 554/590 (93.90%), Postives = 561/590 (95.08%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKF+GSGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDILFKPFIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGEDVDSGDDMV 240
           QKEV+DILFKPFIYSMAKLSDKVLLGKIKS+LFDVILKMGKQLLERRKCGEDVDS DDMV
Sbjct: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240

Query: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           VLGSISLTNLFSTTFY+LGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKEHKKKKKHKKAXXXXXXXXXXXXX 360
           QDVDEVPTLVPVSSE E PSEISAVDVDITAESTDK HKKKKKH   XXXXXXXXXXXXX
Sbjct: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXSGKKKTKKTTNASFDLVSENTTVNKDNENIVASNGENSNN 420
           XXXXXXXXXXXXXXXXXXX SG                    VNKDNENIVASNGENSNN
Sbjct: 361 XXXXXXXXXXXXXXXXXXXGSGXXXXXXXXXXXXXXXXXXXXVNKDNENIVASNGENSNN 420

Query: 421 EQIGDGNMIALDESVISNLQIQFERVASEADFGDNLVSPVISTNGSVKKRKRAKNVDGLQ 480
           EQIGDGNMIALDESVISNLQIQFE+VASEADFGDN+VSPVISTNGSVKKRKRAKNVDGLQ
Sbjct: 421 EQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKNVDGLQ 480

Query: 481 KHDVVLPGEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHDVVLP EVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSRST 591
           ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKS+ST
Sbjct: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 590

[Close]

BLAST of Carg19811 vs. NCBI nr
Match: XP_022996774.1 (ribosomal RNA processing protein 1 homolog [Cucurbita maxima] >XP_022996775.1 ribosomal RNA processing protein 1 homolog [Cucurbita maxima] >XP_022996776.1 ribosomal RNA processing protein 1 homolog [Cucurbita maxima])

HSP 1 Score: 972.6 bits (2513), Expect = 5.9e-280
Identity = 547/590 (92.71%), Postives = 557/590 (94.41%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFA LKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFAFLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDILFKPFIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGEDVDSGDDMV 240
           QK+VIDILFKPFIYSMAKLSDKVLLGKIKS+LFDVILKMGKQLLERRKCGEDVDSGDDMV
Sbjct: 181 QKDVIDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSGDDMV 240

Query: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLF+MHEEYQKLEKDIISSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFSMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKEHKKKKKHKKAXXXXXXXXXXXXX 360
           QDV+EVPTLVPVSSEGEAPSEIS VDVDITAESTDK HKKKKK+   XXXXXXXXXXXXX
Sbjct: 301 QDVNEVPTLVPVSSEGEAPSEISVVDVDITAESTDKAHKKKKKNXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXSGKKKTKKTTNASFDLVSENTTVNKDNENIVASNGENSNN 420
           XXXXXXXXXXXXXXXXXXX SG                     NKDNENIVASNGENSNN
Sbjct: 361 XXXXXXXXXXXXXXXXXXXGSGXXXXXXXXXXXXXXXXXXXXXNKDNENIVASNGENSNN 420

Query: 421 EQIGDGNMIALDESVISNLQIQFERVASEADFGDNLVSPVISTNGSVKKRKRAKNVDGLQ 480
           EQI DGNMIALDESVISNLQ+QFERVASEA+FG N+VSPV+STNGSVKKRKRAKNVDGLQ
Sbjct: 421 EQISDGNMIALDESVISNLQMQFERVASEAEFGVNVVSPVVSTNGSVKKRKRAKNVDGLQ 480

Query: 481 KHDVVLPGEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHDVVLP EVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSRST 591
           ALKKGIPPGPILEFPATAKR KRRAV MRAKKGVRSLPVKRVKKLKS+ST
Sbjct: 541 ALKKGIPPGPILEFPATAKRAKRRAVVMRAKKGVRSLPVKRVKKLKSKST 590

[Close]

BLAST of Carg19811 vs. NCBI nr
Match: XP_008450828.1 (PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo])

HSP 1 Score: 891.7 bits (2303), Expect = 1.3e-255
Identity = 491/590 (83.22%), Postives = 513/590 (86.95%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ F SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR  VQVLEERVFFTDDKFHG+GVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDILFKPFIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGEDVDSGDDMV 240
           QKEV+D+LFKPF+ SMAKL DKVL GKIKS+LFDVILKMGKQLLE RK G+D+DSGDD  
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           V G+ISLTN FSTTFYELGSSPDCCQGNRKVLFAMHEE+QKLEKD  SSGIEISFPDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKEHKKKKKHKKAXXXXXXXXXXXXX 360
           QD DEVPTLVP+ SE EAPSEIS VDVD+ AESTDK                        
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDK------------------------ 360

Query: 361 XXXXXXXXXXXXXXXXXXXXSGKKKTKKTTNASFDLVSENTTVNKDNENIVASNGENSNN 420
             XXXXXXXXXXXXXXXXXX              DLVSEN+  NKDNENIV +NGENSNN
Sbjct: 361 ALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISDLVSENSPANKDNENIVVANGENSNN 420

Query: 421 EQIGDGNMIALDESVISNLQIQFERVASEADFGDNLVSPVISTNGSVKKRKRAKNVDGLQ 480
           EQI DGNMI  DE+VISNLQ+QFE+VA+EADFGD++VSPVISTNGSVKKRKRAKNVD LQ
Sbjct: 421 EQISDGNMITFDETVISNLQMQFEKVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQ 480

Query: 481 KHDVVLPGEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHDV LP E  AEGNTA KS EKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDVALPSEAQAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSRST 591
           ALKKGIPPGPILEFPAT KRTKRRAV+MR KKGVRSLPVKR+KKLKS+ST
Sbjct: 541 ALKKGIPPGPILEFPATTKRTKRRAVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Carg19811 vs. NCBI nr
Match: XP_004150388.1 (PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1 [Cucumis sativus] >KGN61190.1 hypothetical protein Csa_2G062650 [Cucumis sativus])

HSP 1 Score: 865.9 bits (2236), Expect = 7.8e-248
Identity = 484/590 (82.03%), Postives = 505/590 (85.59%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ F SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRR VQVLEERV+F +DKFHG+GVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDILFKPFIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGEDVDSGDDMV 240
           QKEV+D+LFKPF+ SM KL DKVLLGKIKS+LFDVILK GKQLLE RK G+DVDS DD V
Sbjct: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240

Query: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           V G++SLTN FSTTFYELGSSPDCCQGNRKVLFAMHEE+QKLEKD  SSGIEISFPDLQE
Sbjct: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKEHKKKKKHKKAXXXXXXXXXXXXX 360
           QD DEVPTLVP+SS  EAPSEIS VDVD+  ES              XXXXXXXXXXXXX
Sbjct: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXSGKKKTKKTTNASFDLVSENTTVNKDNENIVASNGENSNN 420
           XXXXXXX                           DLVSENT  NKDNENIV +NGENSNN
Sbjct: 361 XXXXXXXGIS------------------------DLVSENTPANKDNENIVVANGENSNN 420

Query: 421 EQIGDGNMIALDESVISNLQIQFERVASEADFGDNLVSPVISTNGSVKKRKRAKNVDGLQ 480
           EQI DGNMI  DE+VISNLQ+QFERVA+EADFG + VSPVISTNGSVKKRKRAKNV  LQ
Sbjct: 421 EQISDGNMITFDETVISNLQMQFERVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQ 480

Query: 481 KHDVVLPGEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHD  LP E  AEGNTA KS EKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDAGLPSEAVAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSRST 591
           ALKKGIPPGPILEFPAT KRTKRRAV+MR K GVRSLPVKR+KKLKS+ST
Sbjct: 541 ALKKGIPPGPILEFPATTKRTKRRAVSMRTKNGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Carg19811 vs. TAIR10
Match: AT5G20600.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 450.3 bits (1157), Expect = 1.9e-126
Identity = 266/575 (46.26%), Postives = 358/575 (62.26%), Query Frame = 0


Query: 13  SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKAPVQSEL 72
           SL+K LAS  ++ RD++LR +++TWLP QT +SD DMKKLW+G+FYCVWHADK+  QSEL
Sbjct: 22  SLIKKLASCKQSIRDRSLRTVLRTWLPEQTEISDEDMKKLWQGIFYCVWHADKSLYQSEL 81

Query: 73  INRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKH 132
           I+RL+S L  L LPL++ YF+VFL TMRREW+ ID LRLDKFYLLIRRFLH FF+L+  +
Sbjct: 82  IDRLSSALQSLPLPLSIHYFTVFLFTMRREWSRIDRLRLDKFYLLIRRFLHGFFSLIDSN 141

Query: 133 SWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPLQKEVIDILFKPF 192
           SWDLE  RR + +L +     DDKF G+GVNY I S F+EELRPFLPL+KEV+++LF PF
Sbjct: 142 SWDLEFTRRLMGILFDGTLLADDKFQGNGVNYHITSAFVEELRPFLPLRKEVLELLFAPF 201

Query: 193 IYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGED-VDSGDDMVVLGSISLTNLF 252
           +  M  ++DK+L+GKIKS+LFD +LKMGK+LL  ++ G+D V   DD+VVLGSI+L+  F
Sbjct: 202 VKIMGVVNDKILVGKIKSNLFDELLKMGKKLLIIKQSGDDAVPEDDDVVVLGSIALSMEF 261

Query: 253 STTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQEQDVDEVPTLVP 312
           +  FYELGSSP+C QGNRK++FA+H+E+ +LEKD+ SS IE+S  +      DEVP  VP
Sbjct: 262 AKRFYELGSSPECHQGNRKLIFALHKEFLQLEKDMSSSSIEVSIVEASRPGNDEVPESVP 321

Query: 313 VSSEGEAPSEISAVDVDITAESTDKEHKKKKKHKKAXXXXXXXXXXXXXXXXXXXXXXXX 372
           VS   E+ + + +    I A  +  + K  KK  K                         
Sbjct: 322 VS---ESNTNVVSKSKKIVANGSSSKKKGLKKCSKT------------------------ 381

Query: 373 XXXXXXXXXSGKKKTKKTTNASFDLVSENTTVNKDNENIVASNGENSNNEQIGDGNMIAL 432
                       KK      A  D V +    NKD                       + 
Sbjct: 382 ------------KKDSVKKGAVMDSVVD--LGNKDE----------------------SF 441

Query: 433 DESVISNLQIQFERVASEADFGDNLVSPV--ISTNGSVKKRKRAKNVDGLQKHDVVLPGE 492
           DE++IS+L+ +FE++ASE     + V+ V  ++   SV K+ + +  +   +  V     
Sbjct: 442 DETMISDLRQEFEKIASEMSPSKSEVASVCDVAEPVSVSKKTKKRKRENKGEEQVSTVNR 501

Query: 493 VDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPG 552
             AE + A  S EKS K+VRF+MKNNLVWKPH PLPP+ LR PPS TPRGSALK+GIP G
Sbjct: 502 DAAETSLAGPSSEKSSKRVRFAMKNNLVWKPHCPLPPQDLRCPPSATPRGSALKQGIPAG 528

Query: 553 PILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKK 585
           P+ E    A R  ++ V   A++GV+S  +K +KK
Sbjct: 562 PVREL---ASRKTKKKVKPAARRGVKS--IKNLKK 528

[Close]

BLAST of Carg19811 vs. Swiss-Prot
Match: sp|Q91YK2|RRP1B_MOUSE (Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b PE=1 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-24
Identity = 79/228 (34.65%), Postives = 121/228 (53.07%), Query Frame = 0


Query: 18  LASSNKATRDKTLRVIIKTWLPTQT-----SLSDGDMKKLWKGLFYCVWHADKAPVQSEL 77
           LASS K  RD+ +R  ++ +L  +T     S S  ++ K+WKGLFYC+W  D+  +Q EL
Sbjct: 16  LASSEKGVRDRAVRK-LRQYLSARTQSDTGSFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75

Query: 78  INRLASLLLHLDLPLAVQYFSV--FLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLK 137
            N + S L+H+   L  QY  +  F  TM REW GID L+LDK+Y+LIR  L Q F +LK
Sbjct: 76  AN-IISQLIHVVNSLEAQYLFIQTFWQTMNREWQGIDKLQLDKYYMLIRLVLRQSFEVLK 135

Query: 138 KHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPF--LPLQKEVIDIL 197
           +++W+       + +L + +   + +   +GV   +  V+LEEL       L  +    L
Sbjct: 136 RNAWEESQITLFLDILMKEILSPESQ-SPNGVRTHLIDVYLEELTTVGGAELLADQNLKL 195

Query: 198 FKPFIYSMAKLSDKVLLGKIKSSLFDVILKMG----KQLLERRKCGED 233
             PF    AK  D  L+  +   +F+VI+       ++ +E RK  ED
Sbjct: 196 IDPFCRIAAKTKDHTLVQTVARGVFEVIVDQSACVPQESVEERKTKED 240

[Close]

BLAST of Carg19811 vs. Swiss-Prot
Match: sp|P56183|RRP1_MOUSE (Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE=1 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 3.1e-22
Identity = 75/235 (31.91%), Postives = 114/235 (48.51%), Query Frame = 0


Query: 12  VSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKA 71
           + L + LA + + TRD+ LR + K ++  ++  + G     ++ K+WKGLFYC+W  DK 
Sbjct: 11  IQLAQRLAGNEQVTRDRALRKLRK-YIEARSQRATGGFTPDELLKVWKGLFYCMWMQDK- 70

Query: 72  PVQSELINRLASLLLHL--DLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQ 131
           P+Q E + R  + L+H         Q+   F  TM REW GID LRLDKFY+L+R  L +
Sbjct: 71  PLQQEELGRTIAQLVHAFHTTEAQHQFLKAFWQTMIREWVGIDRLRLDKFYMLMRMVLSE 130

Query: 132 FFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPLQKEV 191
               +K   WD     + +++L   +   D +   SGV      +FLEEL      +   
Sbjct: 131 SLKAVKARGWDERQIEQLLELLTTEILNPDSQ-APSGVKSHFLEIFLEELAKVGAAELTA 190

Query: 192 IDIL--FKPFIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGEDVDSGD 238
              L    PF    A+  D  +L KI  S+F  I++     +E      D  SG+
Sbjct: 191 DQNLQFIDPFCQIAARTKDSQVLHKIIQSIFQTIVEQAPLAIEDIMNELDTQSGE 242

[Close]

BLAST of Carg19811 vs. Swiss-Prot
Match: sp|Q14684|RRP1B_HUMAN (Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE=1 SV=3)

HSP 1 Score: 107.5 bits (267), Expect = 5.3e-22
Identity = 74/218 (33.94%), Postives = 113/218 (51.83%), Query Frame = 0


Query: 12  VSLVKLLASSNKATRDKTLR-----VIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKA 71
           +   + LASS K  RD+ ++     + +KT   T    S  ++ K+WKGLFYC+W  D+ 
Sbjct: 10  IQFAQRLASSEKGIRDRAVKKLRQYISVKTQRET-GGFSQEELLKIWKGLFYCMWVQDEP 69

Query: 72  PVQSELINRLASLLLHLDLPLAVQYF-SVFLLTMRREWAGIDALRLDKFYLLIRRFLHQF 131
            +Q EL N +A L+  ++   A   F   F  TM REW GID LRLDK+Y+LIR  L Q 
Sbjct: 70  LLQEELANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLRQS 129

Query: 132 FALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEEL-----RPFLPL 191
           F +LK++ W+    +  + VL + V   + +   +GV +    ++L+EL     +  L  
Sbjct: 130 FEVLKRNGWEESRIKVFLDVLMKEVLCPESQ-SPNGVRFHFIDIYLDELSKVGGKELLAD 189

Query: 192 QK-EVIDILFKPFIYSMAKLSDKVLLGKIKSSLFDVIL 218
           Q  + ID    PF    AK  D  L+  I   +F+ I+
Sbjct: 190 QNLKFID----PFCKIAAKTKDHTLVQTIARGVFEAIV 221

[Close]

BLAST of Carg19811 vs. Swiss-Prot
Match: sp|P56182|RRP1_HUMAN (Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.0e-20
Identity = 70/224 (31.25%), Postives = 112/224 (50.00%), Query Frame = 0


Query: 12  VSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKA 71
           + L + LA + + TRD+ +R + K ++  +T  + G     ++ K+WKGLFYC+W  DK 
Sbjct: 11  IQLAQRLAGNEQVTRDRAVRKLRK-YIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDKP 70

Query: 72  PVQSELINRLASLLLHLDLPLAVQ--YFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQ 131
            +Q EL  R  S L+H       Q  +   F  TM REW GID LRLDKFY+L+R  L++
Sbjct: 71  LLQEEL-GRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLNE 130

Query: 132 FFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPLQKEV 191
              +LK   W+       +++L   +     +   +GV      +FLEEL   +  ++  
Sbjct: 131 SLKVLKMQGWEERQIEELLELLMTEILHPSSQ-APNGVKSHFIEIFLEELTK-VGAEELT 190

Query: 192 IDILFK---PFIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLE 226
            D   K   PF    A+  D ++L  I   +F+ I++     +E
Sbjct: 191 ADQNLKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIE 230

[Close]

BLAST of Carg19811 vs. Swiss-Prot
Match: sp|Q9Y7M6|RRP1_SCHPO (Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC9B6.07 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.1e-19
Identity = 72/210 (34.29%), Postives = 109/210 (51.90%), Query Frame = 0


Query: 15  VKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKAPVQSELIN 74
           +K LA++++ TRDK L   ++ +L  +      D  KLWKGLFYC+W ADK   Q +L +
Sbjct: 8   IKKLAANDRKTRDKALE-SLQRFLSQKKKFERLDFLKLWKGLFYCMWMADKPLYQQKLSD 67

Query: 75  RLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKHSW 134
            LA+L+  + +   + + S F  TM REW GID LR DKFYLL+RRF    F  ++  S 
Sbjct: 68  NLAALVPIVWIDNRILFQSTFWETMGREWTGIDILRTDKFYLLMRRFCAAAFRDIQTRSK 127

Query: 135 DL---ELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPLQKEVIDILFKP 194
                ++     Q+  +  F T++    +G+ + +A ++ EELR   P      D  + P
Sbjct: 128 TALLDKVVAEYNQMWMDGPFNTENLAFPNGILFHLADIWTEELRKVYPEDVPKAD-WYLP 187

Query: 195 FIYSMAKLSDKVLLGKIKSSLFDVILKMGK 222
           F  S  K S  V+L K      D + +  K
Sbjct: 188 F-DSTIKSSHNVVLRKTLPKRLDRVSEYTK 214

[Close]

BLAST of Carg19811 vs. TrEMBL
Match: tr|A0A1S3BR64|A0A1S3BR64_CUCME (ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC103492297 PE=4 SV=1)

HSP 1 Score: 891.7 bits (2303), Expect = 8.8e-256
Identity = 491/590 (83.22%), Postives = 513/590 (86.95%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ F SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR  VQVLEERVFFTDDKFHG+GVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDILFKPFIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGEDVDSGDDMV 240
           QKEV+D+LFKPF+ SMAKL DKVL GKIKS+LFDVILKMGKQLLE RK G+D+DSGDD  
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           V G+ISLTN FSTTFYELGSSPDCCQGNRKVLFAMHEE+QKLEKD  SSGIEISFPDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKEHKKKKKHKKAXXXXXXXXXXXXX 360
           QD DEVPTLVP+ SE EAPSEIS VDVD+ AESTDK                        
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDK------------------------ 360

Query: 361 XXXXXXXXXXXXXXXXXXXXSGKKKTKKTTNASFDLVSENTTVNKDNENIVASNGENSNN 420
             XXXXXXXXXXXXXXXXXX              DLVSEN+  NKDNENIV +NGENSNN
Sbjct: 361 ALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISDLVSENSPANKDNENIVVANGENSNN 420

Query: 421 EQIGDGNMIALDESVISNLQIQFERVASEADFGDNLVSPVISTNGSVKKRKRAKNVDGLQ 480
           EQI DGNMI  DE+VISNLQ+QFE+VA+EADFGD++VSPVISTNGSVKKRKRAKNVD LQ
Sbjct: 421 EQISDGNMITFDETVISNLQMQFEKVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQ 480

Query: 481 KHDVVLPGEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHDV LP E  AEGNTA KS EKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDVALPSEAQAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSRST 591
           ALKKGIPPGPILEFPAT KRTKRRAV+MR KKGVRSLPVKR+KKLKS+ST
Sbjct: 541 ALKKGIPPGPILEFPATTKRTKRRAVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Carg19811 vs. TrEMBL
Match: tr|A0A0A0LGX3|A0A0A0LGX3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062650 PE=4 SV=1)

HSP 1 Score: 865.9 bits (2236), Expect = 5.2e-248
Identity = 484/590 (82.03%), Postives = 505/590 (85.59%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ F SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRR VQVLEERV+F +DKFHG+GVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDILFKPFIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGEDVDSGDDMV 240
           QKEV+D+LFKPF+ SM KL DKVLLGKIKS+LFDVILK GKQLLE RK G+DVDS DD V
Sbjct: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240

Query: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           V G++SLTN FSTTFYELGSSPDCCQGNRKVLFAMHEE+QKLEKD  SSGIEISFPDLQE
Sbjct: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKEHKKKKKHKKAXXXXXXXXXXXXX 360
           QD DEVPTLVP+SS  EAPSEIS VDVD+  ES              XXXXXXXXXXXXX
Sbjct: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXSGKKKTKKTTNASFDLVSENTTVNKDNENIVASNGENSNN 420
           XXXXXXX                           DLVSENT  NKDNENIV +NGENSNN
Sbjct: 361 XXXXXXXGIS------------------------DLVSENTPANKDNENIVVANGENSNN 420

Query: 421 EQIGDGNMIALDESVISNLQIQFERVASEADFGDNLVSPVISTNGSVKKRKRAKNVDGLQ 480
           EQI DGNMI  DE+VISNLQ+QFERVA+EADFG + VSPVISTNGSVKKRKRAKNV  LQ
Sbjct: 421 EQISDGNMITFDETVISNLQMQFERVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQ 480

Query: 481 KHDVVLPGEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHD  LP E  AEGNTA KS EKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDAGLPSEAVAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSRST 591
           ALKKGIPPGPILEFPAT KRTKRRAV+MR K GVRSLPVKR+KKLKS+ST
Sbjct: 541 ALKKGIPPGPILEFPATTKRTKRRAVSMRTKNGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Carg19811 vs. TrEMBL
Match: tr|A0A2I4GLN2|A0A2I4GLN2_9ROSI (ribosomal RNA processing protein 1 homolog OS=Juglans regia OX=51240 GN=LOC109008956 PE=4 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 7.6e-159
Identity = 336/591 (56.85%), Postives = 416/591 (70.39%), Query Frame = 0


Query: 12  VSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKAPVQSE 71
           + L+K L + N++TR+K L +++KTWLP+Q  L + DM+KLWK LFYCVWHADK PVQS 
Sbjct: 11  ILLIKQLGACNQSTRNKALCILLKTWLPSQRDLPEDDMRKLWKALFYCVWHADKLPVQSL 70

Query: 72  LINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKK 131
           LI+ L+SLLL L LPL++ YFSVFLLTMRREW GIDALRLDKFYLLIRRFLH  F  LK 
Sbjct: 71  LIDGLSSLLLRLHLPLSLHYFSVFLLTMRREWPGIDALRLDKFYLLIRRFLHHSFVFLKN 130

Query: 132 HSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPLQKEVIDILFKP 191
           +SWDLEL RR + VL E  FF+DDKF G GVNY IASVFLEELR FLP++  ++++L +P
Sbjct: 131 NSWDLELSRRLMGVLVETTFFSDDKFRGIGVNYHIASVFLEELRLFLPVRSAIVEVLLEP 190

Query: 192 FIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGEDVDSGDDMVVLGSISLTNLF 251
           F+  M KL DKVLLGKI+SS+FD +LKMG++LLE +K G++VDSGD  VV+G+I+LT  F
Sbjct: 191 FVSVMGKLPDKVLLGKIRSSMFDELLKMGRKLLEIKKVGDEVDSGDQAVVVGTIALTMGF 250

Query: 252 STTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQEQDVDEVPTLVP 311
           S+ FYELGSS  CCQGNRKVLF +++E+ KLEKD+ SSGIE+S PD  E D +E P+LVP
Sbjct: 251 SSKFYELGSSIQCCQGNRKVLFGLYDEFSKLEKDLASSGIEVSIPDAVEDDEEEAPSLVP 310

Query: 312 VSSE----GEAPSEISAVDVDITAESTDKEHKKKKKHKKAXXXXXXXXXXXXXXXXXXXX 371
           +S+E    G  P+E++A  V+++  S DK  KK +K                        
Sbjct: 311 ISTEMEVVGSKPTEVAADAVNVS--SDDKPLKKCRK------------------------ 370

Query: 372 XXXXXXXXXXXXXSGKKKTKKTTNASFDLVSENTTVNKDNENIVASNGENSNNEQIGDGN 431
            XXXXXXXXXXXX  KK      N   D+V EN+   K+N ++  +NGENSN+E   DG+
Sbjct: 371 -XXXXXXXXXXXXXSKKTESLKKNEIADMVLENSHAEKENNDVAIANGENSNDEYASDGS 430

Query: 432 MIALDESVISNLQIQFERVASEADFGDNLVS----PVISTNGSV-KKRKRAKNVDGLQKH 491
            + L+ESVISNLQIQFE VA+E     ++ S    P I  NG+V KKRKR K++D  +  
Sbjct: 431 FVTLNESVISNLQIQFENVAAEVGLDIDVPSACELPKIKVNGTVSKKRKRLKSMDTQKSQ 490

Query: 492 DVVLPGEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSAL 551
           +  L    DAE  T  KS  KSVKKVRFSMKNNLVWKP  PLP +SLRLPPSVTPRGSAL
Sbjct: 491 NPEL-NNGDAEFGTGAKSEGKSVKKVRFSMKNNLVWKPQCPLPAQSLRLPPSVTPRGSAL 550

Query: 552 KKGIPPGPILEFPATAKRTKRRAVA---MRAKKGVRSLPVKRVKKLKSRST 591
           KKG+PPGPI E P   K+ K+RAV+    R      S  VKR+KK KSRST
Sbjct: 551 KKGVPPGPIREIPPATKKVKQRAVSAKKARXXXXXXSPTVKRLKKKKSRST 573

[Close]

BLAST of Carg19811 vs. TrEMBL
Match: tr|A0A2P5BBF8|A0A2P5BBF8_9ROSA (Nucleolar, Nop OS=Trema orientalis OX=63057 GN=TorRG33x02_326960 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.8e-152
Identity = 332/594 (55.89%), Postives = 421/594 (70.88%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEE  E  +  +S +K LAS +K+ RDK L  ++KTWLP QT +S+  MKKLWKGLFYC 
Sbjct: 1   MEE--ERAEVGLSSIKRLASCDKSIRDKALSFLLKTWLPAQTHVSEDLMKKLWKGLFYCF 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WH+DK P QSEL + ++SL+  LDLPL++ + SVF LTMRREW GIDALRLDKFYLLIRR
Sbjct: 61  WHSDKVPAQSELADSISSLVSKLDLPLSIHFLSVFFLTMRREWTGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL 180
           F+H FF LLK +SWDLEL RR + VLEER    DDK  G+GVNY I S+FL+ELRPFLP+
Sbjct: 121 FVHNFFVLLKCNSWDLELSRRLMGVLEERTLLADDKLQGNGVNYHIVSIFLDELRPFLPI 180

Query: 181 QKEVIDILFKPFIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGEDVDSGDDMV 240
             EV+D+LFKPF+  MAKL DKVLLGKIKS++F+ +LK GK+LLE +K GE+VDS  D+V
Sbjct: 181 GSEVVDVLFKPFLSVMAKLPDKVLLGKIKSNIFEELLKKGKELLEVKKSGENVDSSTDVV 240

Query: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           +LGS++LT  FS  FYELGSSP+CCQGNRKVLF +HEE+ KLEKD+ SSG+E+S PD+ E
Sbjct: 241 LLGSMALTMGFSGKFYELGSSPECCQGNRKVLFGLHEEFSKLEKDLASSGLEVSIPDVIE 300

Query: 301 QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKEHKKKKKHKKAXXXXXXXXXXXXX 360
            D +EVP L+P+++E EA +          +E  +     +   KK      XXXXXXXX
Sbjct: 301 HDEEEVPNLIPITAEMEASA----------SEPVEVMEDGRMSLKKCAQGKAXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXSGKKKTKKTTNASFDLVSENTTVNKDNENIVASNGENSNN 420
           XXXXXXXXXXXXXXXXX    G K  +                   N+N   +NG+ S +
Sbjct: 361 XXXXXXXXXXXXXXXXXDPEKGSKVER-------------------NKNEADANGDESVS 420

Query: 421 EQIGDGNMIALDESVISNLQIQFERVASEADFGDNLVSPV-----ISTNGSVKKRKRAKN 480
           +   +G++  LDESVISNLQ+QFER+A+E+   DN+ S          + + KKRKRA++
Sbjct: 421 DPNFEGDIEPLDESVISNLQLQFERIAAESGLDDNVPSSCDLLKSAKNSTASKKRKRARS 480

Query: 481 VDGLQKHDVVLPGEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSV 540
           +DG Q  + +  GE DA G T     EKS KKV+FSMK+NL+WKPHNPLPP+SLRLPPSV
Sbjct: 481 MDGKQSQNSLQIGEEDAIGATT----EKSAKKVKFSMKSNLIWKPHNPLPPQSLRLPPSV 540

Query: 541 TPRGSALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSRS 590
           TPRGSALKKG+PPGPI E P+ A++ K RAV++  K+  +   VKR+KK+KS S
Sbjct: 541 TPRGSALKKGVPPGPIREIPSPARKVKLRAVSV--KRARKPKGVKRLKKIKSIS 557

[Close]

BLAST of Carg19811 vs. TrEMBL
Match: tr|A0A2C9WC19|A0A2C9WC19_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G080100 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 5.9e-151
Identity = 326/593 (54.97%), Postives = 403/593 (67.96%), Query Frame = 0


Query: 5   VEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHAD 64
           ++G Q  +SL+K LAS +  +R+++L V++KTWLP+Q+ +SD DMKKLWKGLFYCVWHAD
Sbjct: 1   MDGAQAGLSLIKQLASCDNKSRNRSLGVLLKTWLPSQSQISDDDMKKLWKGLFYCVWHAD 60

Query: 65  KAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQ 124
           K P QS LI+RL+S+L  L LP++VQYFSVFLLTMRREW GID LRLDKFYLLIR+F+H 
Sbjct: 61  KLPAQSHLIDRLSSILPQLHLPVSVQYFSVFLLTMRREWTGIDGLRLDKFYLLIRKFMHF 120

Query: 125 FFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPLQKEV 184
           FF LLKK+SWDLEL  R + VL E  F  DDK  G+GVNY IASVFLEELRP LPL KEV
Sbjct: 121 FFLLLKKNSWDLELSARLMSVLVENTFLADDKLLGNGVNYHIASVFLEELRPLLPLSKEV 180

Query: 185 IDILFKPFIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGEDVDSGDDMVVLGS 244
           +D+L  PF+  M K+SDK+LLGKIKS++FD +LKMG +LLE +K   DVDSGDD  VLGS
Sbjct: 181 VDVLLGPFVSIMGKMSDKILLGKIKSNVFDWLLKMGNKLLEIKKSMVDVDSGDDAFVLGS 240

Query: 245 ISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQEQ-DV 304
           I+L   FS  FYELGS+ +C QGNRKVLF +HE++ KLEKD  S GI+IS P+++E  D 
Sbjct: 241 IALAFGFSAKFYELGSAVECPQGNRKVLFGLHEQFLKLEKDFASLGIDISLPEIKEDTDE 300

Query: 305 DEVPTLVPVSSEGEAPSEISAVDVDITAESTDKEHKKKKKHKKAXXXXXXXXXXXXXXXX 364
           DEVP LVP+S+  E     +  D D+   S                              
Sbjct: 301 DEVPNLVPLSTGMEG----AGSDTDMANMS------------------------------ 360

Query: 365 XXXXXXXXXXXXXXXXXSGKKKTKKTTNASFDLVSENTTVNKDNENIVASNGENSNNEQI 424
                XXXXXXXXXXXX              DL+S+  T  ++++N V  N   SN E  
Sbjct: 361 -----XXXXXXXXXXXXXXXXXXXXXXXXXXDLISDCDT--EEDDNTVVPNCGKSNEESN 420

Query: 425 GDGNMIALDESVISNLQIQFERVASEADFGDNLVSPV----ISTNGSV-KKRKRAKNVDG 484
            D N+I  +ESVISNLQ+QFE+VA+E +   N+ S      +S NG V KKRKRAK +D 
Sbjct: 421 HDSNLITFNESVISNLQMQFEKVATEVNLDKNVGSACDFLEVSGNGIVSKKRKRAKGMDK 480

Query: 485 LQKHDVVLPGEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPR 544
            Q  D  L GEV+      VKS EKS KKVRFSMKNNLVWKPH+PLPP+SLR+PPSVTPR
Sbjct: 481 QQSDDPELRGEVNDNSGATVKSTEKSAKKVRFSMKNNLVWKPHSPLPPQSLRIPPSVTPR 540

Query: 545 GSALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSL--PVKRVKKLKSRS 590
           GSALKKGIPPGPI E PAT K  ++     +++K +  +   +KR+KKLK+ S
Sbjct: 541 GSALKKGIPPGPIREMPATKKAKQKAKAVKKSRKVIIGVAPAIKRLKKLKTVS 552

The following BLAST results are available for this feature:

BLAST of Carg19811 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546269.1	5.2e-284	94.41	ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_022929687.1	1.5e-283	93.90	ribosomal RNA processing protein 1 homolog [Cucurbita moschata] >XP_022929688.1 ...	[more]
XP_022996774.1	5.9e-280	92.71	ribosomal RNA processing protein 1 homolog [Cucurbita maxima] >XP_022996775.1 ri...	[more]
XP_008450828.1	1.3e-255	83.22	PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo]	[more]
XP_004150388.1	7.8e-248	82.03	PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1 [Cucumis sativu...	[more]

BLAST of Carg19811 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20600.1	1.9e-126	46.26	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of Carg19811 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q91YK2\|RRP1B_MOUSE	1.9e-24	34.65	Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b P...	[more]
sp\|P56183\|RRP1_MOUSE	3.1e-22	31.91	Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE...	[more]
sp\|Q14684\|RRP1B_HUMAN	5.3e-22	33.94	Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE...	[more]
sp\|P56182\|RRP1_HUMAN	1.0e-20	31.25	Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=...	[more]
sp\|Q9Y7M6\|RRP1_SCHPO	1.1e-19	34.29	Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain ...	[more]

BLAST of Carg19811 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BR64\|A0A1S3BR64_CUCME	8.8e-256	83.22	ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC1034922...	[more]
tr\|A0A0A0LGX3\|A0A0A0LGX3_CUCSA	5.2e-248	82.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062650 PE=4 SV=1	[more]
tr\|A0A2I4GLN2\|A0A2I4GLN2_9ROSI	7.6e-159	56.85	ribosomal RNA processing protein 1 homolog OS=Juglans regia OX=51240 GN=LOC10900...	[more]
tr\|A0A2P5BBF8\|A0A2P5BBF8_9ROSA	1.8e-152	55.89	Nucleolar, Nop OS=Trema orientalis OX=63057 GN=TorRG33x02_326960 PE=4 SV=1	[more]
tr\|A0A2C9WC19\|A0A2C9WC19_MANES	5.9e-151	54.97	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G080100 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0030688	preribosome, small subunit precursor

Vocabulary: **Biological Process**
Term	Definition
GO:0006364	rRNA processing

Vocabulary: **INTERPRO**
Term	Definition
IPR010301	Nop52

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0030688	preribosome, small subunit precursor
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19811-RA	Carg19811-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010301	Nucleolar, Nop52	PFAM	PF05997	Nop52	coord: 13..214 e-value: 3.7E-56 score: 190.2
IPR010301	Nucleolar, Nop52	PANTHER	PTHR13026	NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52	coord: 11..583
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 524..553
None	No IPR available	PANTHER	PTHR13026:SF0	RIBOSOMAL RNA PROCESSING PROTEIN 1 HOMOLOG	coord: 11..583

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19811	Cla005796	Watermelon (97103) v1	carwmB0156
Carg19811	Csa2G062650	Cucumber (Chinese Long) v2	carcuB0184
Carg19811	MELO3C003946	Melon (DHL92) v3.5.1	carmeB0170
Carg19811	ClCG11G011540	Watermelon (Charleston Gray)	carwcgB0158
Carg19811	CSPI02G06560	Wild cucumber (PI 183967)	carcpiB0191
Carg19811	CmaCh05G007250	Cucurbita maxima (Rimu)	carcmaB0221
Carg19811	CmoCh05G007630	Cucurbita moschata (Rifu)	carcmoB0232
Carg19811	CmoCh12G009260	Cucurbita moschata (Rifu)	carcmoB0231
Carg19811	Lsi11G008080	Bottle gourd (USVL1VR-Ls)	carlsiB148
Carg19811	Cp4.1LG07g07670	Cucurbita pepo (Zucchini)	carcpeB0238
Carg19811	Cp4.1LG11g06700	Cucurbita pepo (Zucchini)	carcpeB0237
Carg19811	CsGy2G006730	Cucumber (Gy14) v2	carcgybB0179
Carg19811	MELO3C003946.2	Melon (DHL92) v3.6.1	carmedB0172
Carg19811	CsaV3_2G008990	Cucumber (Chinese Long) v3	carcucB0191
Carg19811	Cla97C11G217590	Watermelon (97103) v2	carwmbB0172

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19811	Carg22680	Silver-seed gourd	carcarB004

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19811	Wax gourd	carwgoB0215
Carg19811	Cucurbita maxima (Rimu)	carcmaB0220