BLAST of CmoCh12G009260 vs. Swiss-Prot
Match:
RRP1B_MOUSE (Ribosomal RNA processing protein 1 homolog B OS=Mus musculus GN=Rrp1b PE=1 SV=2)
HSP 1 Score: 113.6 bits (283), Expect = 6.9e-24
Identity = 79/230 (34.35%), Postives = 121/230 (52.61%), Query Frame = 1
Query: 17 LASSNKATRDKTLRVIIKTWLPTQT-----SISDGDMKKLWKGLFYCVWHADKLPVQTEL 76
LASS K RD+ +R + + +L +T S S ++ K+WKGLFYC+W D+ +Q EL
Sbjct: 16 LASSEKGVRDRAVRKL-RQYLSARTQSDTGSFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75
Query: 77 INRLASLLLNLELPLAFQYFSI--FLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALLK 136
N + S L+++ L QY I F TM REW GID L+LDK+Y+LIR + Q F +LK
Sbjct: 76 AN-IISQLIHVVNSLEAQYLFIQTFWQTMNREWQGIDKLQLDKYYMLIRLVLRQSFEVLK 135
Query: 137 KNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPF--LPLGKDVIDIL 196
+N+W+ + +L + + + + NGV + V+LEEL L D L
Sbjct: 136 RNAWEESQITLFLDILMKEILSPESQ-SPNGVRTHLIDVYLEELTTVGGAELLADQNLKL 195
Query: 197 FKPFILSMAKLSDKVMLGKIKSNLFDVLLKMG----KQLIERRKCGEINS 234
PF AK D ++ + +F+V++ ++ +E RK E S
Sbjct: 196 IDPFCRIAAKTKDHTLVQTVARGVFEVIVDQSACVPQESVEERKTKEDGS 242
BLAST of CmoCh12G009260 vs. Swiss-Prot
Match:
RRP1B_HUMAN (Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens GN=RRP1B PE=1 SV=3)
HSP 1 Score: 107.8 bits (268), Expect = 3.8e-22
Identity = 72/210 (34.29%), Postives = 112/210 (53.33%), Query Frame = 1
Query: 17 LASSNKATRDKTLR-----VIIKTWLPTQTSISDGDMKKLWKGLFYCVWHADKLPVQTEL 76
LASS K RD+ ++ + +KT T S ++ K+WKGLFYC+W D+ +Q EL
Sbjct: 16 LASSEKGIRDRAVKKLRQYISVKTQRETG-GFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75
Query: 77 INRLASLLLNLELPLAFQYF-SIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALLKK 136
N +A L+ + A F F TM REW GID LRLDK+Y+LIR + Q F +LK+
Sbjct: 76 ANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLRQSFEVLKR 135
Query: 137 NSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKDVI---DIL 196
N W+ + + VL + V + + NGV + ++L+EL GK+++ ++
Sbjct: 136 NGWEESRIKVFLDVLMKEVLCPESQ-SPNGVRFHFIDIYLDELSKV--GGKELLADQNLK 195
Query: 197 F-KPFILSMAKLSDKVMLGKIKSNLFDVLL 217
F PF AK D ++ I +F+ ++
Sbjct: 196 FIDPFCKIAAKTKDHTLVQTIARGVFEAIV 221
BLAST of CmoCh12G009260 vs. Swiss-Prot
Match:
RRP1_HUMAN (Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens GN=RRP1 PE=1 SV=1)
HSP 1 Score: 102.8 bits (255), Expect = 1.2e-20
Identity = 72/234 (30.77%), Postives = 116/234 (49.57%), Query Frame = 1
Query: 13 LIKLLASSNKATRDKTLRVIIKTWLPTQTSISDG-----DMKKLWKGLFYCVWHADKLPV 72
L + LA + + TRD+ +R + K ++ +T + G ++ K+WKGLFYC+W DK +
Sbjct: 13 LAQRLAGNEQVTRDRAVRKLRK-YIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDKPLL 72
Query: 73 QTELINRLASLLLNLELPLAFQYF-SIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFA 132
Q EL ++ L+ + A F F TM REW GID LRLDKFY+L+R +++
Sbjct: 73 QEELGRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLNESLK 132
Query: 133 LLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPF--LPLGKDVI 192
+LK W+ L+++L + + NGV +FLEEL L D
Sbjct: 133 VLKMQGWEERQIEELLELLMTEILHPSSQ-APNGVKSHFIEIFLEELTKVGAEELTADQN 192
Query: 193 DILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCGEINSDDDIV 239
PF A+ D ++L I +F+ +++ IE E+++ D+ V
Sbjct: 193 LKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIE-DLLNELDTQDEEV 243
BLAST of CmoCh12G009260 vs. Swiss-Prot
Match:
RRP1_MOUSE (Ribosomal RNA processing protein 1 homolog A OS=Mus musculus GN=Rrp1 PE=1 SV=2)
HSP 1 Score: 101.3 bits (251), Expect = 3.5e-20
Identity = 71/220 (32.27%), Postives = 108/220 (49.09%), Query Frame = 1
Query: 13 LIKLLASSNKATRDKTLRVIIKTWLPTQTSISDG-----DMKKLWKGLFYCVWHADKLPV 72
L + LA + + TRD+ LR + K ++ ++ + G ++ K+WKGLFYC+W DK
Sbjct: 13 LAQRLAGNEQVTRDRALRKLRK-YIEARSQRATGGFTPDELLKVWKGLFYCMWMQDKPLQ 72
Query: 73 QTELINRLASLLLNLELPLA-FQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFA 132
Q EL +A L+ A Q+ F TM REW GID LRLDKFY+L+R + +
Sbjct: 73 QEELGRTIAQLVHAFHTTEAQHQFLKAFWQTMIREWVGIDRLRLDKFYMLMRMVLSESLK 132
Query: 133 LLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPF--LPLGKDVI 192
+K WD +L+++L + D + +GV +FLEEL L D
Sbjct: 133 AVKARGWDERQIEQLLELLTTEILNPDSQ-APSGVKSHFLEIFLEELAKVGAAELTADQN 192
Query: 193 DILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIE 225
PF A+ D +L KI ++F +++ IE
Sbjct: 193 LQFIDPFCQIAARTKDSQVLHKIIQSIFQTIVEQAPLAIE 230
BLAST of CmoCh12G009260 vs. Swiss-Prot
Match:
RRP1_SCHPO (Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC9B6.07 PE=3 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 6.0e-20
Identity = 73/196 (37.24%), Postives = 105/196 (53.57%), Query Frame = 1
Query: 14 IKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWHADKLPVQTELIN 73
IK LA++++ TRDK L + + +L + D KLWKGLFYC+W ADK Q +L +
Sbjct: 8 IKKLAANDRKTRDKALESL-QRFLSQKKKFERLDFLKLWKGLFYCMWMADKPLYQQKLSD 67
Query: 74 RLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALLKKNSW 133
LA+L+ + + + S F TM REW GID LR DKFYLL+RRF F ++ S
Sbjct: 68 NLAALVPIVWIDNRILFQSTFWETMGREWTGIDILRTDKFYLLMRRFCAAAFRDIQTRSK 127
Query: 134 DLELCRRLV---QVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKDVIDILFKP 193
L + + Q+ + F T++ NG+ + +A ++ EELR P D + P
Sbjct: 128 TALLDKVVAEYNQMWMDGPFNTENLAFPNGILFHLADIWTEELRKVYPEDVPKAD-WYLP 187
Query: 194 FILSMAKLSDKVMLGK 207
F S K S V+L K
Sbjct: 188 FD-STIKSSHNVVLRK 200
BLAST of CmoCh12G009260 vs. TrEMBL
Match:
A0A0A0LGX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G062650 PE=4 SV=1)
HSP 1 Score: 892.5 bits (2305), Expect = 2.6e-256
Identity = 469/564 (83.16%), Postives = 507/564 (89.89%), Query Frame = 1
Query: 2 EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWH 61
EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTS+SDGDMKKLWKGLFYCVWH
Sbjct: 3 EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 62
Query: 62 ADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
ADK+PVQ+ELINRLASLLL+L+L LA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63 ADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122
Query: 122 HQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
HQFFALLKK+SWDLELCRRLVQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPL K
Sbjct: 123 HQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQK 182
Query: 182 DVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCG-EINSDDDIVVY 241
+V+D+LFKPF+LSM KL DKV+LGKIKSNLFDV+LK GKQL+E RK G +++S DD VVY
Sbjct: 183 EVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVY 242
Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
GT+ LTN FS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK F SSGIEIS PDLQEQD
Sbjct: 243 GTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD 302
Query: 302 GDEVPTLVPISG-----EEISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKA--- 361
GDEVPTLVPIS EIS+ DVDV E TDKALKK+KK+KKA+DGSGKKKAKKA
Sbjct: 303 GDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKA 362
Query: 362 -KNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERV 421
K TNGISDLVS NT NKD+ENIVVANGENSNNEQISDGNMITFDE+VISNLQMQFERV
Sbjct: 363 KKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFERV 422
Query: 422 AAEAEFGDNDMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVK 481
AAEA+FG + +SPVIS NGSVKKRKRAK V HD LP++ EGNT AKS E SVK
Sbjct: 423 AAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKSVK 482
Query: 482 KVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 541
KVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFPATTKRTKRRAV
Sbjct: 483 KVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 542
Query: 542 AMRAKKGVRSLPVKRLKKPKSKST 556
+MR K GVRSLPVKRLKK KSKST
Sbjct: 543 SMRTKNGVRSLPVKRLKKLKSKST 566
BLAST of CmoCh12G009260 vs. TrEMBL
Match:
A0A067F3M5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008164mg PE=4 SV=1)
HSP 1 Score: 558.1 bits (1437), Expect = 1.2e-155
Identity = 316/576 (54.86%), Postives = 409/576 (71.01%), Query Frame = 1
Query: 2 EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWH 61
E+ E ++ +SLIK LAS NK TR+K L ++K WLP QT ISD DMKKLWKGLFYCVWH
Sbjct: 3 EMGETEEVGSSLIKQLASCNKGTREKALNALLKNWLPNQTQISDDDMKKLWKGLFYCVWH 62
Query: 62 ADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
ADKL QT+LI LAS++ +L+LPLA YFS FLLTMRREW GID LRLDKFYLL+RRF+
Sbjct: 63 ADKLAFQTQLIEFLASVITSLDLPLAIHYFSTFLLTMRREWTGIDGLRLDKFYLLVRRFL 122
Query: 122 HQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
+F ++KKN WD+EL ++L+ VL R + +DDKF GNGVNY I SVF+EE+R FLPL K
Sbjct: 123 RYYFQIMKKNLWDIELVKKLMGVLVHRSWLSDDKFLGNGVNYHIVSVFVEEIRAFLPLRK 182
Query: 182 DVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKC-GEINSDDDIVVY 241
+V++ +F PF+ MAK+ DKV++GKIKSN+FDVL KMG++L++ +K GE++S D++V+
Sbjct: 183 EVVEDIFGPFVSVMAKVQDKVLVGKIKSNVFDVLSKMGRRLLDVKKSGGEVDSSDEVVLL 242
Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDL---Q 301
GTI + FS F+ELGSS +CCQ NRKVLF++HEE+ KLEK F SSG+EIS+PD+
Sbjct: 243 GTIAIVLGFSGKFFELGSSVECCQGNRKVLFSLHEEFLKLEKDFGSSGVEISIPDVSVGD 302
Query: 302 EQDGDEVPTLVPISGEEISMADVDVNNE------ITDKALKKKKKTKKASDGSGK--KKA 361
E + DEVP LVPIS S DVD + + +D+ L K+KK K AS G+ K KK+
Sbjct: 303 EDEDDEVPNLVPIS----SYMDVDGSGDDVAEGAASDEVLNKRKKGKNASSGNDKNGKKS 362
Query: 362 KKAKNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFE 421
KK K N +SD+ S + KDDENIV A +S +EQ D N I F+ESVISNLQMQFE
Sbjct: 363 KKKKKKNAVSDVGSETSLSGKDDENIVNATSNDSIDEQNHDTNFIPFNESVISNLQMQFE 422
Query: 422 RVAAEAEFGDN-DMS---PVISANGS----VKKRKRAKKVDVQHTHDVVLPNQVDTEGNT 481
+VAAE DN D + P ANG+ KKRKR K D + + + + D +
Sbjct: 423 KVAAEVGMEDNVDTACDLPQDRANGTNGTVSKKRKRVKNKDGKQSKNPESTREGDADDCL 482
Query: 482 VAKSGENSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPA 541
AKSGE S KKVRFSMK+NLVWKP +PLPP+SLRLPP+V PRGSALKKG+PPGP++E
Sbjct: 483 TAKSGEKSAKKVRFSMKSNLVWKPQSPLPPQSLRLPPSVAPRGSALKKGVPPGPVMEMSV 542
Query: 542 TTKRTKRRAVAMRAKKGV---RSLPVKRLKKPKSKS 555
+K+ K+RA +++ + V ++ +K +K KS S
Sbjct: 543 ASKKVKQRAKSVKKARKVIKIKNPTLKGARKLKSLS 574
BLAST of CmoCh12G009260 vs. TrEMBL
Match:
V4WI81_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010385mg PE=4 SV=1)
HSP 1 Score: 557.8 bits (1436), Expect = 1.5e-155
Identity = 317/576 (55.03%), Postives = 408/576 (70.83%), Query Frame = 1
Query: 2 EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWH 61
E+ E ++ +SLIK LAS NK TR+K L ++K WLP QT ISD DMKKLWKGLFYCVWH
Sbjct: 55 EMGETEEVGSSLIKQLASCNKGTREKALNALLKNWLPNQTQISDDDMKKLWKGLFYCVWH 114
Query: 62 ADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
ADKL QT+LI LAS++ +L+LPLA YFS FLLTMRREW GID LRLDKFYLL+RRF+
Sbjct: 115 ADKLAFQTQLIEFLASVITSLDLPLAIHYFSTFLLTMRREWTGIDGLRLDKFYLLVRRFL 174
Query: 122 HQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
+F ++KKN WD+EL ++L+ VL R +DDKF GNGVNY I SVF+EE+R FLPL K
Sbjct: 175 RYYFQIMKKNLWDIELVKKLMGVLVHRSLLSDDKFLGNGVNYHIVSVFVEEIRAFLPLRK 234
Query: 182 DVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKC-GEINSDDDIVVY 241
+V++ +F PF+ MAK+ DKV++GKIKSN+FDVL KMG++L++ +K GE++S D++V+
Sbjct: 235 EVVEDIFGPFVSVMAKVQDKVLVGKIKSNVFDVLSKMGRRLLDVKKSGGEVDSSDEVVLL 294
Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDL---Q 301
GTI + FS F+ELGSS +CCQ NRKVLF++HEE+ KLEK F SSG+EIS+PD+
Sbjct: 295 GTIAIVLGFSGKFFELGSSVECCQGNRKVLFSLHEEFLKLEKDFGSSGVEISIPDVSVGD 354
Query: 302 EQDGDEVPTLVPISGEEISMADVDVNNE------ITDKALKKKKKTKKASDGSGK--KKA 361
E + DEVP LVPIS S DVD + + +D+ L K KK KKAS G+ K KK+
Sbjct: 355 EDEDDEVPNLVPIS----SYMDVDGSGDDVAEGAASDEVLNKCKKGKKASSGNDKNGKKS 414
Query: 362 KKAKNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFE 421
KK K N +SD+ S + KDDENIV A +S +EQ D N I F+ESVISNLQMQFE
Sbjct: 415 KKKKKKNAVSDVGSETSLSGKDDENIVNATSNDSIDEQNHDTNFIPFNESVISNLQMQFE 474
Query: 422 RVAAEAEFGDN-DMS---PVISANGS----VKKRKRAKKVDVQHTHDVVLPNQVDTEGNT 481
+VAAE DN D + P ANG+ KKRKR K D + + + + D +
Sbjct: 475 KVAAEVGMEDNVDTACDLPQDRANGTNGTVSKKRKRVKNKDGKQSKNPESTREGDADDCL 534
Query: 482 VAKSGENSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPA 541
AKSGE S KKVRFSMK+NLVWKP +PLPP+SLRLPP+V PRGSALKKG+PPGP++E
Sbjct: 535 TAKSGEKSAKKVRFSMKSNLVWKPQSPLPPQSLRLPPSVAPRGSALKKGVPPGPVMEMSV 594
Query: 542 TTKRTKRRAVAMRAKKGV---RSLPVKRLKKPKSKS 555
+K+ K+RA +++ + V ++ +K +K KS S
Sbjct: 595 ASKKVKQRAKSVKKARKVIKIKNPTLKGARKLKSLS 626
BLAST of CmoCh12G009260 vs. TrEMBL
Match:
A0A061FFL5_THECC (Ribosomal RNA processing protein 1 B, putative OS=Theobroma cacao GN=TCM_034656 PE=4 SV=1)
HSP 1 Score: 551.2 bits (1419), Expect = 1.4e-153
Identity = 309/559 (55.28%), Postives = 404/559 (72.27%), Query Frame = 1
Query: 12 SLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWHADKLPVQTEL 71
+LIK LA+ +K+TRD+ +R ++ TWLP+Q +SD +MK+LWKGLFYCVWHADKLP Q++L
Sbjct: 11 TLIKQLAACDKSTRDRAVRSLLHTWLPSQAEVSDEEMKRLWKGLFYCVWHADKLPAQSDL 70
Query: 72 INRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALLKKN 131
I +L+S+L LE L+ QYFS+FLLTMRREW GID LRLDKFYLLIRRF++ FF +LKK
Sbjct: 71 IEKLSSVLPKLETGLSLQYFSVFLLTMRREWTGIDKLRLDKFYLLIRRFLNCFFVMLKKW 130
Query: 132 SWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKDVIDILFKPF 191
SWDL+ RR ++VL + F DDKF GNGVNY IAS+FLEE+RPFLP+ K+V+++L +PF
Sbjct: 131 SWDLDFTRRSIRVLVDGTFLADDKFQGNGVNYHIASIFLEEIRPFLPVKKEVVEVLLEPF 190
Query: 192 ILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCG-EINSDDDIVVYGTIPLTNLFS 251
+ M K+ DKV++GKI+SN+FDV +KMG++ +E ++ G E++ +D+VV GTI L FS
Sbjct: 191 VGIMGKVGDKVLVGKIRSNVFDVFVKMGRRFLELKRSGDEVDEGEDLVVLGTISLLMGFS 250
Query: 252 STFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQE-QDGDEVPTLVP 311
+ FYELGSS DCCQ NRKV+ +HEE+ KLEK GI++S+P+ E + DEVP L+P
Sbjct: 251 AKFYELGSSADCCQGNRKVVLGLHEEFLKLEKDLTLLGIDVSIPEPNEGGEEDEVPELIP 310
Query: 312 ISGE-EISMAD-----VDVN-NEITDKALKKKKKTKKASDGSGKKKAKKAKNTNGISDLV 371
I+ E E+ +D +VN N KALKK KK KKA+ GSG KK KK KN
Sbjct: 311 IASEMEVDDSDGVSEPAEVNANGSAKKALKKSKKAKKATRGSG-KKTKKCKN-------- 370
Query: 372 SNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFGDNDM 431
+ + +++++ +V A NS+ EQ DG+ ITF ESVISNLQ+QFE+VAAE D D+
Sbjct: 371 AECSPADQENDVMVPAESANSSIEQNGDGHSITFTESVISNLQLQFEKVAAEVGL-DGDV 430
Query: 432 SPVI---SANGSV-KKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVKKVRFSMK 491
+ NG+ KKRKR K VD Q + + L NQ D EG AK+GE S K+VRFSMK
Sbjct: 431 ASACDLPKVNGAASKKRKRVKSVDGQKSQNGELTNQGDGEGGGTAKTGEKSTKRVRFSMK 490
Query: 492 NNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKG 551
NNLVWKPH+PLPP+SLRLPP+VTPRGSALKKGIPPGPI E P TK+ K+ +A+K
Sbjct: 491 NNLVWKPHSPLPPQSLRLPPSVTPRGSALKKGIPPGPITEVPPLTKKVKKAKSVKKARKV 550
Query: 552 VRSL--PVKRLKKPKSKST 556
++S+ VKR KK KS S+
Sbjct: 551 IKSMYPLVKRTKKLKSVSS 559
BLAST of CmoCh12G009260 vs. TrEMBL
Match:
F6GXI5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00510 PE=4 SV=1)
HSP 1 Score: 538.1 bits (1385), Expect = 1.3e-149
Identity = 306/554 (55.23%), Postives = 393/554 (70.94%), Query Frame = 1
Query: 14 IKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWHADKLPVQTELIN 73
I+ LAS +K+TRD+ LR ++ TWLP+Q+ +S+ DMKK+WKGLFY +WHADK PVQ++LI+
Sbjct: 6 IRHLASCDKSTRDEALR-LLHTWLPSQSQVSEEDMKKVWKGLFYSLWHADKTPVQSDLID 65
Query: 74 RLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALLKKNSW 133
RLASLL L LPL+ YFS+FLLTMRREW GIDALRLDKFYLLIR+FM+ FF +LK NSW
Sbjct: 66 RLASLLTTLNLPLSIHYFSVFLLTMRREWPGIDALRLDKFYLLIRKFMYNFFLVLKNNSW 125
Query: 134 DLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKDVIDILFKPFIL 193
DLE+ +RL+ VLE D +F GNGV Y +ASVFLEELRPFLP+ ++++ +LF+PF+
Sbjct: 126 DLEISKRLIVVLE----LEDGRFSGNGVGYHVASVFLEELRPFLPVRREIVSVLFEPFVE 185
Query: 194 SMAKLSDKVMLGKIKSNLFDVLLKMGKQLIE-RRKCGEINSDDDIVVYGTIPLTNLFSST 253
M + +DKV++GK+KSN+FD L++MG++L+E +R G+ D D V +GT+ + FS
Sbjct: 186 VMGRSADKVLVGKVKSNVFDFLVRMGQRLLEVKRLGGDEGGDGDAVAFGTLAVGFGFSKK 245
Query: 254 FYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQDGDEVPTLVPISG 313
FYELGS+PDC Q NRKVLF +HE + KLEK F S+ IEIS+P+ D DE+PTL+PI+
Sbjct: 246 FYELGSAPDCLQGNRKVLFGLHEGFAKLEKDFASARIEISIPEDDNCDEDELPTLIPIAQ 305
Query: 314 EEISMADVD-----VNNEITDKALKKKKKTKKASDGSGKKKAKKAKNTNGISDLVSNNTH 373
E + V N KA KK KK KK S GS KK K K + DLVS N+
Sbjct: 306 PEAEVEGASEVVESVGNGSARKASKKSKKLKKVSGGSDKKNKMKKKKS---PDLVSENSA 365
Query: 374 MNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFGDNDM----S 433
+ +EN+ V N ENSN E SD ++I F+ESVISNLQMQFE+VAAE G+ M S
Sbjct: 366 TVEYNENVTVPNDENSNCEPSSDQSLIDFNESVISNLQMQFEKVAAEVGLGNELMGLCDS 425
Query: 434 PVISANGSV-KKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVKKVRFSMKNNLV 493
P NG+V KKRKRAK + HDV +Q D E + +AKS S KKV+FS+KNNLV
Sbjct: 426 PTRPVNGTVSKKRKRAKN---NNEHDV--SSQGDDESSALAKSKGKSAKKVKFSIKNNLV 485
Query: 494 WKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKGVRSL 553
WKP +PLPP+SLRLPP+VTPRGSALKKGIPPGP+ E P T K KR + + G++S+
Sbjct: 486 WKPQSPLPPQSLRLPPSVTPRGSALKKGIPPGPVREMPQTKKVKKRAKSLKKGRNGIKSI 545
Query: 554 --PVKRLKKPKSKS 555
+KRLKK +S S
Sbjct: 546 SPAIKRLKKLQSLS 546
BLAST of CmoCh12G009260 vs. TAIR10
Match:
AT5G20600.1 (AT5G20600.1 FUNCTIONS IN: molecular_function unknown)
HSP 1 Score: 464.2 bits (1193), Expect = 1.2e-130
Identity = 264/554 (47.65%), Postives = 362/554 (65.34%), Query Frame = 1
Query: 7 DQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWHADKLP 66
++D SLIK LAS ++ RD++LR +++TWLP QT ISD DMKKLW+G+FYCVWHADK
Sbjct: 17 EEDCKSLIKKLASCKQSIRDRSLRTVLRTWLPEQTEISDEDMKKLWQGIFYCVWHADKSL 76
Query: 67 VQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFA 126
Q+ELI+RL+S L +L LPL+ YF++FL TMRREW+ ID LRLDKFYLLIRRF+H FF+
Sbjct: 77 YQSELIDRLSSALQSLPLPLSIHYFTVFLFTMRREWSRIDRLRLDKFYLLIRRFLHGFFS 136
Query: 127 LLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKDVIDI 186
L+ NSWDLE RRL+ +L + DDKF GNGVNY I S F+EELRPFLPL K+V+++
Sbjct: 137 LIDSNSWDLEFTRRLMGILFDGTLLADDKFQGNGVNYHITSAFVEELRPFLPLRKEVLEL 196
Query: 187 LFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCGE--INSDDDIVVYGTIP 246
LF PF+ M ++DK+++GKIKSNLFD LLKMGK+L+ ++ G+ + DDD+VV G+I
Sbjct: 197 LFAPFVKIMGVVNDKILVGKIKSNLFDELLKMGKKLLIIKQSGDDAVPEDDDVVVLGSIA 256
Query: 247 LTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQDGDEV 306
L+ F+ FYELGSSP+C Q NRK++FA+H+E+ +LEK SS IE+S+ + DEV
Sbjct: 257 LSMEFAKRFYELGSSPECHQGNRKLIFALHKEFLQLEKDMSSSSIEVSIVEASRPGNDEV 316
Query: 307 PTLVPISGEEISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKAKNTNGISDLVSN 366
P VP+S ++ V + +I KKK K + K KK + + DL
Sbjct: 317 PESVPVSESNTNV--VSKSKKIVANGSSSKKKGLKKCSKTKKDSVKKGAVMDSVVDL--- 376
Query: 367 NTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFGDNDMSP 426
NKD+ +FDE++IS+L+ +FE++A+E ++++
Sbjct: 377 ---GNKDE----------------------SFDETMISDLRQEFEKIASEMSPSKSEVAS 436
Query: 427 V------ISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVKKVRFSMK 486
V +S + KKRKR K + Q V N+ E + S E S K+VRF+MK
Sbjct: 437 VCDVAEPVSVSKKTKKRKRENKGEEQ----VSTVNRDAAETSLAGPSSEKSSKRVRFAMK 496
Query: 487 NNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKG 546
NNLVWKPH PLPP+ LR PP+ TPRGSALK+GIP GP+ E +++TK++ V A++G
Sbjct: 497 NNLVWKPHCPLPPQDLRCPPSATPRGSALKQGIPAGPVREL--ASRKTKKK-VKPAARRG 531
Query: 547 VRSLPVKRLKKPKS 553
V+S +K LKK S
Sbjct: 557 VKS--IKNLKKKLS 531
BLAST of CmoCh12G009260 vs. NCBI nr
Match:
gi|659069592|ref|XP_008450828.1| (PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1 [Cucumis melo])
HSP 1 Score: 903.3 bits (2333), Expect = 2.1e-259
Identity = 475/564 (84.22%), Postives = 512/564 (90.78%), Query Frame = 1
Query: 2 EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWH 61
EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTS+SDGDMKKLWKGLFYCVWH
Sbjct: 3 EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 62
Query: 62 ADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
ADK+PVQ+ELINRLASLLL+L+L LA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63 ADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122
Query: 122 HQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
HQFFALLKK+SWDLELCR LVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL K
Sbjct: 123 HQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQK 182
Query: 182 DVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCG-EINSDDDIVVY 241
+V+D+LFKPF+LSMAKL DKV+ GKIKSNLFDV+LKMGKQL+E RK G +I+S DD VY
Sbjct: 183 EVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTAVY 242
Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
GTI LTN FS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK F SSGIEIS PDLQEQD
Sbjct: 243 GTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD 302
Query: 302 GDEVPTLVPISGE-----EISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKA--- 361
GDEVPTLVPI E EISM DVDV+ E TDKALKK+K++KKA+DGSGKKKAKKA
Sbjct: 303 GDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAKKA 362
Query: 362 -KNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERV 421
K TNGISDLVS N+ NKD+ENIVVANGENSNNEQISDGNMITFDE+VISNLQMQFE+V
Sbjct: 363 KKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFEKV 422
Query: 422 AAEAEFGDNDMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVK 481
AAEA+FGD+ +SPVIS NGSVKKRKRAK VD HDV LP++ EGNT AKS E SVK
Sbjct: 423 AAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKSVK 482
Query: 482 KVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 541
KVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFPATTKRTKRRAV
Sbjct: 483 KVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 542
Query: 542 AMRAKKGVRSLPVKRLKKPKSKST 556
+MR KKGVRSLPVKRLKK KSKST
Sbjct: 543 SMRTKKGVRSLPVKRLKKLKSKST 566
BLAST of CmoCh12G009260 vs. NCBI nr
Match:
gi|449465344|ref|XP_004150388.1| (PREDICTED: ribosomal RNA processing protein 1 homolog isoform X1 [Cucumis sativus])
HSP 1 Score: 892.5 bits (2305), Expect = 3.8e-256
Identity = 469/564 (83.16%), Postives = 507/564 (89.89%), Query Frame = 1
Query: 2 EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWH 61
EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTS+SDGDMKKLWKGLFYCVWH
Sbjct: 3 EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 62
Query: 62 ADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
ADK+PVQ+ELINRLASLLL+L+L LA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63 ADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122
Query: 122 HQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
HQFFALLKK+SWDLELCRRLVQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPL K
Sbjct: 123 HQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQK 182
Query: 182 DVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCG-EINSDDDIVVY 241
+V+D+LFKPF+LSM KL DKV+LGKIKSNLFDV+LK GKQL+E RK G +++S DD VVY
Sbjct: 183 EVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVY 242
Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
GT+ LTN FS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK F SSGIEIS PDLQEQD
Sbjct: 243 GTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD 302
Query: 302 GDEVPTLVPISG-----EEISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKA--- 361
GDEVPTLVPIS EIS+ DVDV E TDKALKK+KK+KKA+DGSGKKKAKKA
Sbjct: 303 GDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKA 362
Query: 362 -KNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERV 421
K TNGISDLVS NT NKD+ENIVVANGENSNNEQISDGNMITFDE+VISNLQMQFERV
Sbjct: 363 KKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFERV 422
Query: 422 AAEAEFGDNDMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVK 481
AAEA+FG + +SPVIS NGSVKKRKRAK V HD LP++ EGNT AKS E SVK
Sbjct: 423 AAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKSVK 482
Query: 482 KVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 541
KVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFPATTKRTKRRAV
Sbjct: 483 KVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 542
Query: 542 AMRAKKGVRSLPVKRLKKPKSKST 556
+MR K GVRSLPVKRLKK KSKST
Sbjct: 543 SMRTKNGVRSLPVKRLKKLKSKST 566
BLAST of CmoCh12G009260 vs. NCBI nr
Match:
gi|659069594|ref|XP_008450836.1| (PREDICTED: ribosomal RNA processing protein 1 homolog B isoform X2 [Cucumis melo])
HSP 1 Score: 619.8 bits (1597), Expect = 4.7e-174
Identity = 324/388 (83.51%), Postives = 352/388 (90.72%), Query Frame = 1
Query: 2 EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWH 61
EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTS+SDGDMKKLWKGLFYCVWH
Sbjct: 3 EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 62
Query: 62 ADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
ADK+PVQ+ELINRLASLLL+L+L LA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63 ADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122
Query: 122 HQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
HQFFALLKK+SWDLELCR LVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL K
Sbjct: 123 HQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQK 182
Query: 182 DVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCG-EINSDDDIVVY 241
+V+D+LFKPF+LSMAKL DKV+ GKIKSNLFDV+LKMGKQL+E RK G +I+S DD VY
Sbjct: 183 EVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTAVY 242
Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
GTI LTN FS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK F SSGIEIS PDLQEQD
Sbjct: 243 GTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD 302
Query: 302 GDEVPTLVPISGE-----EISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKA--- 361
GDEVPTLVPI E EISM DVDV+ E TDKALKK+K++KKA+DGSGKKKAKKA
Sbjct: 303 GDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAKKA 362
Query: 362 -KNTNGISDLVSNNTHMNKDDENIVVAN 380
K TNGISDLVS N+ NKD+ENIVVAN
Sbjct: 363 KKTTNGISDLVSENSPANKDNENIVVAN 390
BLAST of CmoCh12G009260 vs. NCBI nr
Match:
gi|778667662|ref|XP_011648968.1| (PREDICTED: ribosomal RNA processing protein 1 homolog B isoform X2 [Cucumis sativus])
HSP 1 Score: 618.2 bits (1593), Expect = 1.4e-173
Identity = 321/388 (82.73%), Postives = 351/388 (90.46%), Query Frame = 1
Query: 2 EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWH 61
EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTS+SDGDMKKLWKGLFYCVWH
Sbjct: 3 EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 62
Query: 62 ADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
ADK+PVQ+ELINRLASLLL+L+L LA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63 ADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122
Query: 122 HQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
HQFFALLKK+SWDLELCRRLVQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPL K
Sbjct: 123 HQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQK 182
Query: 182 DVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCG-EINSDDDIVVY 241
+V+D+LFKPF+LSM KL DKV+LGKIKSNLFDV+LK GKQL+E RK G +++S DD VVY
Sbjct: 183 EVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVY 242
Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
GT+ LTN FS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK F SSGIEIS PDLQEQD
Sbjct: 243 GTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD 302
Query: 302 GDEVPTLVPISG-----EEISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKA--- 361
GDEVPTLVPIS EIS+ DVDV E TDKALKK+KK+KKA+DGSGKKKAKKA
Sbjct: 303 GDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKA 362
Query: 362 -KNTNGISDLVSNNTHMNKDDENIVVAN 380
K TNGISDLVS NT NKD+ENIVVAN
Sbjct: 363 KKTTNGISDLVSENTPANKDNENIVVAN 390
BLAST of CmoCh12G009260 vs. NCBI nr
Match:
gi|645234478|ref|XP_008223829.1| (PREDICTED: ribosomal RNA processing protein 1 homolog [Prunus mume])
HSP 1 Score: 571.2 bits (1471), Expect = 1.9e-159
Identity = 329/575 (57.22%), Postives = 410/575 (71.30%), Query Frame = 1
Query: 1 MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVW 60
ME ++ SLIK LAS NK+ RD+ LRV++KTWLPTQ ++ D MKKLWKGLFYCVW
Sbjct: 16 MEAETATEEGLSLIKQLASCNKSGRDRALRVLLKTWLPTQLNLHDDHMKKLWKGLFYCVW 75
Query: 61 HADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRF 120
HADK+PVQT+LI+RL+SL+L+L LPL+ YFS FLLTMRREW+GIDALRLDKFYLLIRRF
Sbjct: 76 HADKVPVQTQLIDRLSSLVLSLHLPLSIHYFSAFLLTMRREWSGIDALRLDKFYLLIRRF 135
Query: 121 MHQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG 180
M FFAL++ N WDLEL +RL+ VLEE FF DDKF GNGVNY IASVFLEELRP+LPL
Sbjct: 136 MASFFALMRNNLWDLELVKRLMGVLEEVTFFADDKFLGNGVNYHIASVFLEELRPYLPLK 195
Query: 181 KDVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCGE-INSDDDIVV 240
+V++++ FI AK+ DKV+LGKI+SN FD LL GK+L+E +K GE + S D+++V
Sbjct: 196 AEVLEVVLVSFIRVSAKVPDKVLLGKIRSNTFDALLGAGKRLLEVKKLGEDVGSGDEVMV 255
Query: 241 YGTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQ 300
+G+I LT FSS FYELGSSP+CCQ NRKVLF +HEE+ KLEK SSGIEIS+PD+
Sbjct: 256 FGSIALTMGFSSKFYELGSSPECCQGNRKVLFGLHEEFLKLEKELESSGIEISIPDVVYN 315
Query: 301 DGDEVPTLVPISGEEISM-----ADVDVNNEITDKALKKKKKTKK---ASDGSG---KKK 360
D + VPTLVP++GEE+ + +V + N K LKK K +K A+D KKK
Sbjct: 316 DDEVVPTLVPLAGEEMEVGNSEAGEVVMVNGSAGKLLKKCKNREKDTGAADTKAEKKKKK 375
Query: 361 AKKAKNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQF 420
KK K N I D S + ++++EN VVANGE+S+N+Q +D N + D++VISNLQMQF
Sbjct: 376 KKKNKKENEILDSDSEKSSTDRENEN-VVANGESSDNQQATDENAVKLDDNVISNLQMQF 435
Query: 421 ERVAAEAEFGDNDMS-----PVISANGSV-KKRKRAKKVDVQHTHDVVLPNQVDTEGNTV 480
E++AAEA D D+ P S G V KKRKR KK + D EG T
Sbjct: 436 EKIAAEAGL-DGDVPSACDLPTASDKGPVSKKRKRVKKA-----------VEEDVEGGTN 495
Query: 481 AKSGENSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPAT 540
AKSGE S KKV+FSMK+NLVWKP +PLPP+ LR+PP+ TPRGSALKKG+PPGPI E P
Sbjct: 496 AKSGEKSAKKVKFSMKSNLVWKPQSPLPPQDLRVPPSATPRGSALKKGVPPGPIREMPLP 555
Query: 541 TKRTK--RRAVAMRAKKGVRSLPVKRLKKPKSKST 556
TK+ K R A +A+K +KR+KK KS+ T
Sbjct: 556 TKKVKMVRVVTAKKARKA-----IKRIKKLKSRPT 572
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| RRP1B_MOUSE | 6.9e-24 | 34.35 | Ribosomal RNA processing protein 1 homolog B OS=Mus musculus GN=Rrp1b PE=1 SV=2 | [more] |
| RRP1B_HUMAN | 3.8e-22 | 34.29 | Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens GN=RRP1B PE=1 SV=3 | [more] |
| RRP1_HUMAN | 1.2e-20 | 30.77 | Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens GN=RRP1 PE=1 SV=1 | [more] |
| RRP1_MOUSE | 3.5e-20 | 32.27 | Ribosomal RNA processing protein 1 homolog A OS=Mus musculus GN=Rrp1 PE=1 SV=2 | [more] |
| RRP1_SCHPO | 6.0e-20 | 37.24 | Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LGX3_CUCSA | 2.6e-256 | 83.16 | Uncharacterized protein OS=Cucumis sativus GN=Csa_2G062650 PE=4 SV=1 | [more] |
| A0A067F3M5_CITSI | 1.2e-155 | 54.86 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008164mg PE=4 SV=1 | [more] |
| V4WI81_9ROSI | 1.5e-155 | 55.03 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010385mg PE=4 SV=1 | [more] |
| A0A061FFL5_THECC | 1.4e-153 | 55.28 | Ribosomal RNA processing protein 1 B, putative OS=Theobroma cacao GN=TCM_034656 ... | [more] |
| F6GXI5_VITVI | 1.3e-149 | 55.23 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00510 PE=4 SV=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G20600.1 | 1.2e-130 | 47.65 | FUNCTIONS IN: molecular_function unknown | [more] |
