BLAST of Cp4.1LG07g07550 vs. Swiss-Prot
Match:
PEP_ARATH (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana GN=PEP PE=1 SV=1)
HSP 1 Score: 448.7 bits (1153), Expect = 7.6e-125
Identity = 254/442 (57.47%), Postives = 324/442 (73.30%), Query Frame = 1
Query: 64 PNHAGASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGT 123
P+ +++++WPGWPGDCVFR+IVPV KVG+IIGR+GD IKK+CEETRARI+VLDG V T
Sbjct: 57 PDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNT 116
Query: 124 PDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDE----AKASFCSVRLLVASTQ 183
PDR+VLISGKEEPEA +SPAMDAVLR+F+RVSG +N+D+ A + F SVRLLVASTQ
Sbjct: 117 PDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQ 176
Query: 184 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVG 243
AINLIGKQGSLIKSI E++GASVR+LS +E PFYA DER+V+LQGE LK+LKALEA+VG
Sbjct: 177 AINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVG 236
Query: 244 HLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWAD-KSSLLSASQSVISNEYPPSSKRESL 303
HLR+FLVDH+V+PLFEK + SQ RQ + A+ KSSL + S +++ ++ ++RE L
Sbjct: 237 HLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPL 296
Query: 304 FFDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDII 363
F +R++ +DS + SG+S+Y D VL A S G+ R VTQV+QTMQIP SYAEDII
Sbjct: 297 FLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDII 356
Query: 364 GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGPKEPVT 423
GV GANIA+IRR SGA +TI+ES PD+ITVEIKGT+SQVQ A+QLIQE I KEPV+
Sbjct: 357 GVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQEFIINHKEPVS 416
Query: 424 -SSSYGRLDTTGL---------------------------RSSYSQLGASGSSYTPSSLS 471
S Y R+D+ + ++YSQLG S+YTP +L+
Sbjct: 417 VSGGYARIDSGYVPAYPPQLSNRQEPLPSTYMGTEPVQYRPTAYSQLGGP-STYTP-TLT 476
BLAST of Cp4.1LG07g07550 vs. Swiss-Prot
Match:
FLK_ARATH (Flowering locus K homology domain OS=Arabidopsis thaliana GN=FLK PE=1 SV=1)
HSP 1 Score: 276.6 bits (706), Expect = 5.2e-73
Identity = 174/419 (41.53%), Postives = 239/419 (57.04%), Query Frame = 1
Query: 68 GASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRV 127
G +K+WPGWPG+ VFR++VP KVGSIIGR+GD+IKKI EETRARI++LDG GT +R
Sbjct: 174 GGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERA 233
Query: 128 VLISGKEEPEAPLSPAMDAVLRIFKR-VSGFSENEDEA-KASFCSVRLLVASTQAINLIG 187
V++SGKEEPE+ L P+MD +LR+ R V G +A S S RLLV ++QA +LIG
Sbjct: 234 VMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIG 293
Query: 188 KQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVGHLRKFL 247
KQG +K+IQE++ VRVL +++P +A D+R+VE+ GE V +ALE + HLRKFL
Sbjct: 294 KQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFL 353
Query: 248 VDHSVLPLFEKSFNTPASQ-DRQTDAWADKSSLLSASQSV------------------IS 307
VD S++P FE P Q D + SV
Sbjct: 354 VDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHD 413
Query: 308 NEYPPSSKRESLFFDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQT 367
+ YPP R+ +++ H GIS YG + + + V + + QVTQ
Sbjct: 414 SYYPPPEMRQPP-MEKQPH-------QGISAYGREPPM----NVHVSSAPPMVAQQVTQQ 473
Query: 368 MQIPLSYAEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLI 427
MQIPLSYA+ +IG G+NI++ RR SGA +TIQE+RG+P E+TVE+ GT SQVQ A QLI
Sbjct: 474 MQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLI 533
Query: 428 QEAISGPKEPVTSSSYGRLDTTGLRSSYSQLGASGSSYTPSSLSSQSYGGYGSSGLGGY 466
Q ++ P + + Y+ GS Y ++ + GGY + GY
Sbjct: 534 QNFMAEAGAPAPAQPQ---TVAPEQQGYNPYATHGSVY--AAAPTNPPGGYATDYSSGY 575
BLAST of Cp4.1LG07g07550 vs. Swiss-Prot
Match:
HEN4_ARATH (KH domain-containing protein HEN4 OS=Arabidopsis thaliana GN=HEN4 PE=1 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 3.1e-17
Identity = 67/243 (27.57%), Postives = 122/243 (50.21%), Query Frame = 1
Query: 80 DCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAP 139
D VF+I+ G +IG G +++ + ET A I V + +R++ ++ E PE
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQ 510
Query: 140 LSPAMDAVLRIFKRVSGFSENE--DEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQES 199
SPA A++ IF R+ + N+ D S + RL+V ++Q ++GK G ++ ++++
Sbjct: 511 SSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570
Query: 200 TGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVGHLRKFLVDHSVLPLFEKS 259
TGA++++L ++ P ++++V++ GE V +A+ + LR + +S+ KS
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKS 630
Query: 260 ---FNTPASQDRQTDAWADKSSLLSASQSVISNEYPPSSKRESLFFDRETHLDSHISSSG 318
T DRQ+D + L S +SN P++ SL E DS +S S
Sbjct: 631 SSALTTERFYDRQSD-----NPLSIGSHQSVSN---PATNSSSLHRRSE---DSFLSGSH 682
BLAST of Cp4.1LG07g07550 vs. Swiss-Prot
Match:
Y4837_ARATH (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana GN=At4g18375 PE=2 SV=1)
HSP 1 Score: 90.5 bits (223), Expect = 5.3e-17
Identity = 86/334 (25.75%), Postives = 154/334 (46.11%), Query Frame = 1
Query: 80 DCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAV--GTPDRVVLISGKEEPE 139
+ VF+++ P+ + +IG+ G IK+I E + + I V D G + V++++ E P+
Sbjct: 311 ELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPD 370
Query: 140 APLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQES 199
S A++AVL + + + N+++A+ ++LLV+S +IGK GS+I I++
Sbjct: 371 DMKSMAVEAVLLLQEYI-----NDEDAEN--VKMQLLVSSKVIGCVIGKSGSVINEIRKR 430
Query: 200 TGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVGHLRKFLVDHSVLPLFEKS 259
T A++ + G + + +VE+ GE V AL +V LR+ ++
Sbjct: 431 TNANICISKGKK--------DDLVEVSGEVSSVRDALIQIVLRLREDVLG---------- 490
Query: 260 FNTPASQDRQTDAWADKSSLLSASQSVISNEYPPSSKRESLFFDRETHLDSHISSSGISL 319
+ + R+ A D S LS S + + + + S S+SG
Sbjct: 491 -DKDSVATRKPPARTDNCSFLSGSSNA--------------GYTLPSFMSSMASTSGFHG 550
Query: 320 YGP----DRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDIIGVGGANIAFIRRNSG 379
YG D VL + GR + + + IP ++G GG N+ IRR SG
Sbjct: 551 YGSFPAGDNVLGSTGPYSYGR----LPSSSALEILIPAHAMSKVMGKGGGNLENIRRISG 600
Query: 380 AILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ 408
A++ I S+ + + GT Q++ A+ L+Q
Sbjct: 611 AMIEISASKTSHGDHIALLSGTLEQMRCAENLVQ 600
BLAST of Cp4.1LG07g07550 vs. Swiss-Prot
Match:
PCBP3_HUMAN (Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2)
HSP 1 Score: 89.7 bits (221), Expect = 9.0e-17
Identity = 93/338 (27.51%), Postives = 155/338 (45.86%), Query Frame = 1
Query: 84 RIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPA 143
R+++ +VGSIIG++G+ +KK+ EE+ ARI + +G P+R+V I+G P + A
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---PTDAIFKA 108
Query: 144 MDAVLRIFKR-VSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGASV 203
+ F+ + N ++RL+V ++Q +LIGK GS IK I+ESTGA V
Sbjct: 109 FAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQV 168
Query: 204 RVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTP- 263
+V +GD +P ER V + G +++ ++ + + + + +P K +TP
Sbjct: 169 QV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 228
Query: 264 --------ASQDRQTDAWADKSSLLSASQSVISNEYPPSSKRESLFFDRETHLDSHISSS 323
Q + D+ + L ++ +PP + F + L H S
Sbjct: 229 IFAGGQAYTIQGQYAIPHPDQLTKLH-QLAMQQTPFPPLGQTNPAFPGEK--LPLHSSEE 288
Query: 324 GISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDIIGVGGANIAFIRRNSG 383
+L G +SSG+ S T + IP IIG G I IR+ SG
Sbjct: 289 AQNLMG--------QSSGLDAS----PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSG 348
Query: 384 AILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAIS 412
A + I + E + I GT + + +AQ LI ++
Sbjct: 349 AQIKIANATEGSSERQITITGTPANISLAQYLINARLT 362
BLAST of Cp4.1LG07g07550 vs. TrEMBL
Match:
A0A0A0LMH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G061550 PE=4 SV=1)
HSP 1 Score: 779.6 bits (2012), Expect = 2.1e-222
Identity = 412/470 (87.66%), Postives = 429/470 (91.28%), Query Frame = 1
Query: 1 MATNATTENGSTDADALNSSPQLACEAAAEPDSTEAGGAESDIDPSNQDYLSAPASDYVP 60
MATN TTENGSTDA S L AAAEPDSTEAG +SD DPSNQDY S P SD
Sbjct: 1 MATNTTTENGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSDSAA 60
Query: 61 HESPNHAGASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
HE NH G SDKKWPGWPGDCVFR+IVPVVKVGSIIGR+GDLIKK+CEETRARIRVLDGA
Sbjct: 61 HEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
Query: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
VGTPDRVVLISGKEE E+PLSPAMDAV+R+FKRVSG SENEDEAKASFCS+RLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVGH 240
INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAG DERMVELQGE+LKVLKALE VVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISNEYPPSSKRESLFF 300
LRKFLVDHSVLPLFEKSFNTPASQDRQT+ WADKSSLL+ASQS+IS EY PS+KRESLF
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRESLFL 300
Query: 301 DRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDIIGV 360
DRE H DSHISSSGISLYG DRVLP IRSSGVGRSG PIVTQVTQTMQIPLSYAEDIIGV
Sbjct: 301 DREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360
Query: 361 GGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGPKEPVTSS 420
GG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEA++ PKEPVTSS
Sbjct: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 420
Query: 421 SYGRLDTTGLRSSYSQLGASGSSYTPSSLSSQSYGGYGSSGLGGYSTFRL 471
SYGRLDTTGLRSSYSQL ASGSS+T SSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 SYGRLDTTGLRSSYSQLAASGSSFTSSSLSSQSYGGYGSSGLGGYTTFRL 470
BLAST of Cp4.1LG07g07550 vs. TrEMBL
Match:
W9SIR6_9ROSA (Poly(RC)-binding protein 3 OS=Morus notabilis GN=L484_005636 PE=4 SV=1)
HSP 1 Score: 583.6 bits (1503), Expect = 2.2e-163
Identity = 330/480 (68.75%), Postives = 382/480 (79.58%), Query Frame = 1
Query: 1 MATNATTENGSTDADALNSSPQLA-CEAAAEPDSTEAGGAESDIDPSNQDYLSAPASDYV 60
MATN T NG T A +S P + AAA + +A E N++ S PA
Sbjct: 1 MATNEPTANGVTKAPKSDSQPIPSDATAAASTANEKAPVTEPGHATGNRNMESEPAPPGE 60
Query: 61 PHESP-NHAGAS-----DKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRAR 120
E+P ++AG + DKKW GWPGDCVFR+IVPV+KVGSIIGR+G+LIKK+CEETRAR
Sbjct: 61 SGEAPASNAGTTATTDADKKWLGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRAR 120
Query: 121 IRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRL 180
IRVLDGAVGTPDR+VLISGKEEPEA LSPAMDAV+R+FKRVSG SENE A +FCS+RL
Sbjct: 121 IRVLDGAVGTPDRIVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENE-AAGVAFCSIRL 180
Query: 181 LVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKA 240
LVASTQAINLIGKQGSLIKSIQESTGASVRVL+GDE+PFYA DER+VELQGE LKVLKA
Sbjct: 181 LVASTQAINLIGKQGSLIKSIQESTGASVRVLTGDEVPFYAAADERIVELQGEGLKVLKA 240
Query: 241 LEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISNEYPPSS 300
LEAV+GHLRKFLVDHSV+PLFEKS+N+ SQ+RQ D WADKS L +++Q+ + YP ++
Sbjct: 241 LEAVIGHLRKFLVDHSVIPLFEKSYNSTISQERQVDTWADKSMLQASTQTGVGTNYPITA 300
Query: 301 KRESLFFDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSY 360
KRE F +RET L+ + SSGIS+YG D LP IR +G GR+G PIVTQ+ QTMQIPLSY
Sbjct: 301 KREPYFLERETQLEPQLPSSGISMYGQDTSLPGIRPTGFGRAGAPIVTQIAQTMQIPLSY 360
Query: 361 AEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGP 420
AEDIIG+ G+NIA+IRR SGAILT+QESRGLPDEITVEIKGTSSQVQ+AQQLIQE I+
Sbjct: 361 AEDIIGIEGSNIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQLAQQLIQEVINNH 420
Query: 421 KEPVTSSSYGRLDTTGLRSSYSQLGASGSSYTPS-SLSSQSY--GGYGSSGLGGYSTFRL 471
KEPV SS YGR+DT LRS+YSQL SSY P+ SL +SY GGYGSSGLGGYSTFRL
Sbjct: 421 KEPVPSS-YGRIDTA-LRSNYSQLS---SSYPPTTSLPPRSYSGGGYGSSGLGGYSTFRL 474
BLAST of Cp4.1LG07g07550 vs. TrEMBL
Match:
F6GXK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00030 PE=4 SV=1)
HSP 1 Score: 580.5 bits (1495), Expect = 1.9e-162
Identity = 325/478 (67.99%), Postives = 380/478 (79.50%), Query Frame = 1
Query: 1 MATNATTENGSTDADALNSSPQLACEAAAEP-DSTEAGGAESDIDPSNQDYLSAPASDYV 60
MAT TTE + A + E + P ++ A AES+ PS + +
Sbjct: 1 MATTGTTEPAPVNGAAQSPGSDPKTELSETPLSASNAATAESEQAPSE----NLESESTA 60
Query: 61 PHESPNHAGASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDG 120
P E+ A AS+KKWPGWPGDCVFR+IVPV+KVGSIIGR+G+LIKK+CEETRARIRVLDG
Sbjct: 61 PPETEAPAPASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDG 120
Query: 121 AVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKA------SFCSVRL 180
AVGT DR+VLISG+EEPEAPLSPAMDAV+R+FKRV+G SE+E + KA +FCS+RL
Sbjct: 121 AVGTSDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRL 180
Query: 181 LVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKA 240
LVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDE+PFYA DER+VELQGE LKV KA
Sbjct: 181 LVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKA 240
Query: 241 LEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISNEYPPSS 300
LEAVVGHLRKFLVDHSVLPLFE+++N SQDRQ+D WADKS L SQ+ + ++Y +
Sbjct: 241 LEAVVGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADKSLLHGTSQTGMGSDYSLPA 300
Query: 301 KRESLFFDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSY 360
KRESL+ DRET ++ SG+ +YG + L IRSSG+GR+G PIVTQ+ QTMQIPLSY
Sbjct: 301 KRESLYLDRETQMEH----SGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSY 360
Query: 361 AEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGP 420
AEDIIG+GGANIA+IRR SGAILT+QESRGLPDEITVEIKGTSSQVQ AQQLIQE IS
Sbjct: 361 AEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFISNH 420
Query: 421 KEPVTSSSYGRLDTTGLRSSYSQLGASGSSYTPSSLSSQSY-GGYGSSGLGGYSTFRL 471
KEPV SSYG++D +GLRSSYSQLG +SY+ SSLSSQ Y GGYGSSG+GGYS++RL
Sbjct: 421 KEPV-PSSYGKMD-SGLRSSYSQLG--NTSYSSSSLSSQPYGGGYGSSGVGGYSSYRL 466
BLAST of Cp4.1LG07g07550 vs. TrEMBL
Match:
A0A067F3I5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012307mg PE=4 SV=1)
HSP 1 Score: 559.7 bits (1441), Expect = 3.4e-156
Identity = 311/478 (65.06%), Postives = 370/478 (77.41%), Query Frame = 1
Query: 1 MATNATTENGSTDADALNSSPQLACEAAAEPDSTEAGGAESDIDPS----NQDYLSAPAS 60
MAT TT+NGS + + P+ A +TE+ ES+ P+ N ++ + S
Sbjct: 1 MATAETTDNGSINLPEPDPQPETA--------TTESPTTESEAPPTIGSENTEHTTESDS 60
Query: 61 DYVPHESPNHAGA-SDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIR 120
P+ A +KKWPGWPG CVFR+IVPV+KVGSIIGR+G+LIKK CE+TRARI+
Sbjct: 61 ALPQSTGPDAAAVPEEKKWPGWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIK 120
Query: 121 VLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKAS---FCSVR 180
VLDG V +PDR+VLISGKEEPEAP+SPAMDA +R+FKRVSG EN+ +AKAS FCSVR
Sbjct: 121 VLDGPVSSPDRIVLISGKEEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVR 180
Query: 181 LLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLK 240
LLV STQAINLIGKQGSLIKSIQE++GASVRVLS DE PFY DER+VE+QGE KVLK
Sbjct: 181 LLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLK 240
Query: 241 ALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISNEYPPS 300
ALEAVVGHLRKFLVD VLPLFEK++N SQ+RQ + WADKSSL +A+QS IS EY PS
Sbjct: 241 ALEAVVGHLRKFLVDQGVLPLFEKTYNASISQERQVETWADKSSLHAATQSAISTEYTPS 300
Query: 301 SKRESLFFDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLS 360
++RESLF +RE L+S SGIS+YG D L IRSS +GR+ PIVTQ+TQTMQIP+S
Sbjct: 301 TRRESLFLEREPQLESRYRLSGISIYGQDPALSTIRSSALGRASGPIVTQITQTMQIPIS 360
Query: 361 YAEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISG 420
YAEDIIGVGG +I IRR SGAI+T+QESRGLPDEITVEIKGTSSQVQ+AQQLIQE ++
Sbjct: 361 YAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQLAQQLIQEYMNN 420
Query: 421 PKEPVTSSSYGRLDTTGLRSSYSQLGASGSSYTPSSLSSQSYGGYGSSGLGGYSTFRL 471
KE +T SSYG++D TG R SY QLG SSY SSLS+Q YGGYGSSG+GGY+++RL
Sbjct: 421 HKESIT-SSYGQID-TGYRPSYPQLG--NSSYPSSSLSTQPYGGYGSSGVGGYTSYRL 466
BLAST of Cp4.1LG07g07550 vs. TrEMBL
Match:
V4U0W5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008200mg PE=4 SV=1)
HSP 1 Score: 559.7 bits (1441), Expect = 3.4e-156
Identity = 311/478 (65.06%), Postives = 370/478 (77.41%), Query Frame = 1
Query: 1 MATNATTENGSTDADALNSSPQLACEAAAEPDSTEAGGAESDIDPS----NQDYLSAPAS 60
MAT TT+NGS + + P+ A +TE+ ES+ P+ N ++ + S
Sbjct: 1 MATAETTDNGSINLPEPDPQPETA--------TTESPTTESEAPPTIGSENTEHTTESDS 60
Query: 61 DYVPHESPNHAGA-SDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIR 120
P+ A +KKWPGWPG CVFR+IVPV+KVGSIIGR+G+LIKK CE+TRARI+
Sbjct: 61 ALPQSTGPDAAAVPEEKKWPGWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIK 120
Query: 121 VLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKAS---FCSVR 180
VLDG V +PDR+VLISGKEEPEAP+SPAMDA +R+FKRVSG EN+ +AKAS FCSVR
Sbjct: 121 VLDGPVSSPDRIVLISGKEEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVR 180
Query: 181 LLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLK 240
LLV STQAINLIGKQGSLIKSIQE++GASVRVLS DE PFY DER+VE+QGE KVLK
Sbjct: 181 LLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSSDEAPFYVTEDERIVEMQGEAAKVLK 240
Query: 241 ALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISNEYPPS 300
ALEAVVGHLRKFLVD VLPLFEK++N SQ+RQ + WADKSSL +A+QS IS EY PS
Sbjct: 241 ALEAVVGHLRKFLVDQGVLPLFEKTYNASISQERQVETWADKSSLHAATQSAISTEYTPS 300
Query: 301 SKRESLFFDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLS 360
++RESLF +RE L+S SGIS+YG D L IRSS +GR+ PIVTQ+TQTMQIP+S
Sbjct: 301 TRRESLFLEREPQLESRYRLSGISIYGQDPALSTIRSSALGRASGPIVTQITQTMQIPIS 360
Query: 361 YAEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISG 420
YAEDIIGVGG +I IRR SGAI+T+QESRGLPDEITVEIKGTSSQVQ+AQQLIQE ++
Sbjct: 361 YAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQLAQQLIQEYMNN 420
Query: 421 PKEPVTSSSYGRLDTTGLRSSYSQLGASGSSYTPSSLSSQSYGGYGSSGLGGYSTFRL 471
KE +T SSYG++D TG R SY QLG SSY SSLS+Q YGGYGSSG+GGY+++RL
Sbjct: 421 HKESIT-SSYGQID-TGYRPSYPQLG--NSSYPSSSLSTQPYGGYGSSGVGGYTSYRL 466
BLAST of Cp4.1LG07g07550 vs. TAIR10
Match:
AT4G26000.1 (AT4G26000.1 RNA-binding KH domain-containing protein)
HSP 1 Score: 448.7 bits (1153), Expect = 4.3e-126
Identity = 254/442 (57.47%), Postives = 324/442 (73.30%), Query Frame = 1
Query: 64 PNHAGASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGT 123
P+ +++++WPGWPGDCVFR+IVPV KVG+IIGR+GD IKK+CEETRARI+VLDG V T
Sbjct: 57 PDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNT 116
Query: 124 PDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDE----AKASFCSVRLLVASTQ 183
PDR+VLISGKEEPEA +SPAMDAVLR+F+RVSG +N+D+ A + F SVRLLVASTQ
Sbjct: 117 PDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQ 176
Query: 184 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVG 243
AINLIGKQGSLIKSI E++GASVR+LS +E PFYA DER+V+LQGE LK+LKALEA+VG
Sbjct: 177 AINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVG 236
Query: 244 HLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWAD-KSSLLSASQSVISNEYPPSSKRESL 303
HLR+FLVDH+V+PLFEK + SQ RQ + A+ KSSL + S +++ ++ ++RE L
Sbjct: 237 HLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPL 296
Query: 304 FFDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDII 363
F +R++ +DS + SG+S+Y D VL A S G+ R VTQV+QTMQIP SYAEDII
Sbjct: 297 FLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDII 356
Query: 364 GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGPKEPVT 423
GV GANIA+IRR SGA +TI+ES PD+ITVEIKGT+SQVQ A+QLIQE I KEPV+
Sbjct: 357 GVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQEFIINHKEPVS 416
Query: 424 -SSSYGRLDTTGL---------------------------RSSYSQLGASGSSYTPSSLS 471
S Y R+D+ + ++YSQLG S+YTP +L+
Sbjct: 417 VSGGYARIDSGYVPAYPPQLSNRQEPLPSTYMGTEPVQYRPTAYSQLGGP-STYTP-TLT 476
BLAST of Cp4.1LG07g07550 vs. TAIR10
Match:
AT3G04610.1 (AT3G04610.1 RNA-binding KH domain-containing protein)
HSP 1 Score: 276.6 bits (706), Expect = 2.9e-74
Identity = 174/419 (41.53%), Postives = 239/419 (57.04%), Query Frame = 1
Query: 68 GASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRV 127
G +K+WPGWPG+ VFR++VP KVGSIIGR+GD+IKKI EETRARI++LDG GT +R
Sbjct: 174 GGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERA 233
Query: 128 VLISGKEEPEAPLSPAMDAVLRIFKR-VSGFSENEDEA-KASFCSVRLLVASTQAINLIG 187
V++SGKEEPE+ L P+MD +LR+ R V G +A S S RLLV ++QA +LIG
Sbjct: 234 VMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIG 293
Query: 188 KQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVGHLRKFL 247
KQG +K+IQE++ VRVL +++P +A D+R+VE+ GE V +ALE + HLRKFL
Sbjct: 294 KQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFL 353
Query: 248 VDHSVLPLFEKSFNTPASQ-DRQTDAWADKSSLLSASQSV------------------IS 307
VD S++P FE P Q D + SV
Sbjct: 354 VDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHD 413
Query: 308 NEYPPSSKRESLFFDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQT 367
+ YPP R+ +++ H GIS YG + + + V + + QVTQ
Sbjct: 414 SYYPPPEMRQPP-MEKQPH-------QGISAYGREPPM----NVHVSSAPPMVAQQVTQQ 473
Query: 368 MQIPLSYAEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLI 427
MQIPLSYA+ +IG G+NI++ RR SGA +TIQE+RG+P E+TVE+ GT SQVQ A QLI
Sbjct: 474 MQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLI 533
Query: 428 QEAISGPKEPVTSSSYGRLDTTGLRSSYSQLGASGSSYTPSSLSSQSYGGYGSSGLGGY 466
Q ++ P + + Y+ GS Y ++ + GGY + GY
Sbjct: 534 QNFMAEAGAPAPAQPQ---TVAPEQQGYNPYATHGSVY--AAAPTNPPGGYATDYSSGY 575
BLAST of Cp4.1LG07g07550 vs. TAIR10
Match:
AT5G46190.1 (AT5G46190.1 RNA-binding KH domain-containing protein)
HSP 1 Score: 107.5 bits (267), Expect = 2.3e-23
Identity = 102/339 (30.09%), Postives = 164/339 (48.38%), Query Frame = 1
Query: 84 RIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDR-VVLISGKEEPEAPLSP 143
++I K+G +IG+ G IK I + + + I V D D V+ ++ E P+ S
Sbjct: 320 KVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSM 379
Query: 144 AMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGASV 203
A++AVL + ++++ E+ED+ K ++LLV+S +IGK GS+I I++ T A +
Sbjct: 380 AVEAVLLLQEKIN--DEDEDKVK-----MQLLVSSKVIGCIIGKSGSIISEIRKRTKADI 439
Query: 204 RVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPA 263
+ G+ P A P++ +VE+ GE V AL +V LR D + S N P
Sbjct: 440 HISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLR----DDVLRDRETGSRNQPP 499
Query: 264 SQDRQTDAWADKSSL--LSASQSVISNEYPPSSKRESLFFDRETHLDSHI----SSSGIS 323
++ + ++ SS L+ QS +S+ + S+ F+R S + SS GI
Sbjct: 500 ARSENNNFFSSSSSNTGLALPQSFMSS----VPQVASVDFNRRPETGSSMSMLPSSGGIY 559
Query: 324 LYGPDRVLPAIRSSGVGRS-----GVPIVTQVTQTMQIPLSYAEDIIGVGGANIAFIRRN 383
YG V S S G+P T T ++IP + ++G GG N+ IRR
Sbjct: 560 GYGSFPVGNTSYGSNSSYSSNLYGGLPQST--TMEVRIPANAVGKVMGRGGGNLDNIRRI 619
Query: 384 SGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAI 411
SGA++ I +S+ I GTS Q + A+ L Q I
Sbjct: 620 SGAMIEISDSKNSHGGRVALISGTSEQKRTAENLFQAFI 641
BLAST of Cp4.1LG07g07550 vs. TAIR10
Match:
AT5G53060.1 (AT5G53060.1 RNA-binding KH domain-containing protein)
HSP 1 Score: 107.5 bits (267), Expect = 2.3e-23
Identity = 95/343 (27.70%), Postives = 165/343 (48.10%), Query Frame = 1
Query: 80 DCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAP 139
+ VF+I+ P K+ ++G +I + E +RV D G+ ++++ IS +E P+ P
Sbjct: 324 ELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDP 383
Query: 140 LSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTG 199
PA +A+L I ++ ++D + + RLLV S +I L GK GS + I TG
Sbjct: 384 FFPAQEALLHIQTQIIDLIPDKD----NLITTRLLVPSRDSICLEGKAGS-VSEISRLTG 443
Query: 200 ASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFN 259
SV++L+ +E+P A ++ ++++ GE + A EA+V L L H L +K
Sbjct: 444 TSVQILAREEIPRCASINDVVIQITGE---IRAAREALV-ELTLLLRSHMFKELSQK--E 503
Query: 260 TPASQDRQT---DAWADKSSLLSASQSVISNEYPPSS----KRESLFFDRETHLDSHISS 319
TP + T + A + S++ ++ S E P SS ++ S + ++
Sbjct: 504 TPPASTSTTGPLEGVAGVMEVASSNNTIQSREGPTSSNLNLQQVSTILPQFKEGFGSVAK 563
Query: 320 SGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDIIGVGGANIAFIRRNS 379
+G S + + +P S R VP+VT+ T + +P + ++ +A I S
Sbjct: 564 AGESEHREE--VPVTTS----RMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWS 623
Query: 380 GAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGPKE 416
GA +TI E R + + I GT Q + AQ L+Q I +E
Sbjct: 624 GASVTIVEDRPEETQNIIRISGTPEQAERAQSLLQGFILSIQE 649
BLAST of Cp4.1LG07g07550 vs. TAIR10
Match:
AT5G15270.2 (AT5G15270.2 RNA-binding KH domain-containing protein)
HSP 1 Score: 103.2 bits (256), Expect = 4.4e-22
Identity = 105/391 (26.85%), Postives = 167/391 (42.71%), Query Frame = 1
Query: 52 SAPASDYVPHESPNHAGASDKKWPGWP--------GDCVFRIIVPVVKVGSIIGRRGDLI 111
S P SDY + G S +++ G D VFR + PV K+GS+IGR GD++
Sbjct: 19 SRPQSDY------DDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDIV 78
Query: 112 KKICEETRARIRVLDGAVGTPDRVVLISGKEEP-------EAPLSPAMDAVLRIFKRV-- 171
K++ +TR++IR+ + G +RV+ I + E LSPA DA+ RI RV
Sbjct: 79 KQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRVVA 138
Query: 172 -SGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFY 231
SE+ E + + +LLV S Q ++G+ G ++++I+ TGA +R++ MP
Sbjct: 139 DDARSEDSPEGEKQ-VTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLC 198
Query: 232 AGPDERMVELQGETLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWAD 291
A + ++++ GE L V KAL + L + N SQ
Sbjct: 199 ALNSDELIQISGEVLIVKKALLQIASRLHE---------------NPSRSQ--------- 258
Query: 292 KSSLLSASQSVISNEYPPSSKRESLFFDRETHLDSHISSSGIS-------LYGPDRVLPA 351
+LLS+ S YP S R L + S G LY P R
Sbjct: 259 --NLLSS-----SGGYPAGSLMSHAGGPRLVGLAPLMGSYGRDAGDWSRPLYQPPR---- 318
Query: 352 IRSSGVGRSGVPIVTQVTQTMQIPLSYAEDIIGVGGANIAFIRRNSGAILTIQESRGLPD 411
P T+ + P+ +IG GGA I +R+ + A + + SR +
Sbjct: 319 ---------NDPPATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGN 350
Query: 412 EITVEIKGTSSQVQMAQQLIQEAISGPKEPV 418
+ + I A+++ ++A S E V
Sbjct: 379 DCLITIS--------AREVFEDAYSPTIEAV 350
BLAST of Cp4.1LG07g07550 vs. NCBI nr
Match:
gi|778667604|ref|XP_004149510.2| (PREDICTED: RNA-binding KH domain-containing protein PEPPER [Cucumis sativus])
HSP 1 Score: 779.6 bits (2012), Expect = 3.0e-222
Identity = 412/470 (87.66%), Postives = 429/470 (91.28%), Query Frame = 1
Query: 1 MATNATTENGSTDADALNSSPQLACEAAAEPDSTEAGGAESDIDPSNQDYLSAPASDYVP 60
MATN TTENGSTDA S L AAAEPDSTEAG +SD DPSNQDY S P SD
Sbjct: 1 MATNTTTENGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSDSAA 60
Query: 61 HESPNHAGASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
HE NH G SDKKWPGWPGDCVFR+IVPVVKVGSIIGR+GDLIKK+CEETRARIRVLDGA
Sbjct: 61 HEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
Query: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
VGTPDRVVLISGKEE E+PLSPAMDAV+R+FKRVSG SENEDEAKASFCS+RLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 180
Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVGH 240
INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAG DERMVELQGE+LKVLKALE VVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISNEYPPSSKRESLFF 300
LRKFLVDHSVLPLFEKSFNTPASQDRQT+ WADKSSLL+ASQS+IS EY PS+KRESLF
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRESLFL 300
Query: 301 DRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDIIGV 360
DRE H DSHISSSGISLYG DRVLP IRSSGVGRSG PIVTQVTQTMQIPLSYAEDIIGV
Sbjct: 301 DREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360
Query: 361 GGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGPKEPVTSS 420
GG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEA++ PKEPVTSS
Sbjct: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 420
Query: 421 SYGRLDTTGLRSSYSQLGASGSSYTPSSLSSQSYGGYGSSGLGGYSTFRL 471
SYGRLDTTGLRSSYSQL ASGSS+T SSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 SYGRLDTTGLRSSYSQLAASGSSFTSSSLSSQSYGGYGSSGLGGYTTFRL 470
BLAST of Cp4.1LG07g07550 vs. NCBI nr
Match:
gi|659069666|ref|XP_008451191.1| (PREDICTED: poly(rC)-binding protein 3 [Cucumis melo])
HSP 1 Score: 768.1 bits (1982), Expect = 9.1e-219
Identity = 409/470 (87.02%), Postives = 428/470 (91.06%), Query Frame = 1
Query: 1 MATNATTENGSTDADALNSSPQLACEAAAEPDSTEAGGAESDIDPSNQDYLSAPASDYVP 60
MATN TT+NGSTDA A S L AAAE DSTE G +SDIDPSNQDY S P SD
Sbjct: 1 MATNTTTDNGSTDAIANPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSDSAA 60
Query: 61 HESPNHAGASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
HE +H GASDKKWPGWPGDCVFR+IVPVVKVGSIIGR+GDLIKK+CEETRARIRVLDGA
Sbjct: 61 HEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 120
Query: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
VGTPDRVVLISGKEE ++PLSPAMDAV+R+FKRVSG SENEDEAKASF S+RLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVASTQA 180
Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVGH 240
INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAG DERMVELQGE+LKVLKALE VVGH
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGH 240
Query: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISNEYPPSSKRESLFF 300
LRKFLVDHSVLPLFEKSFNTPASQDRQT+ WADKSSLL+ASQS+IS EYPPS+KRESLF
Sbjct: 241 LRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFL 300
Query: 301 DRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDIIGV 360
DRETHLDSHISSSGISLYG DRVLP IRSSGVGRSG QVTQTMQIPLSYAEDIIGV
Sbjct: 301 DRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGS--CQVTQTMQIPLSYAEDIIGV 360
Query: 361 GGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGPKEPVTSS 420
GG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEA++ PKEPVTSS
Sbjct: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 420
Query: 421 SYGRLDTTGLRSSYSQLGASGSSYTPSSLSSQSYGGYGSSGLGGYSTFRL 471
SYGRLDTTGLRSSYSQL ASGSSYT SSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 421 SYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 468
BLAST of Cp4.1LG07g07550 vs. NCBI nr
Match:
gi|703156789|ref|XP_010111553.1| (Poly(rC)-binding protein 3 [Morus notabilis])
HSP 1 Score: 583.6 bits (1503), Expect = 3.2e-163
Identity = 330/480 (68.75%), Postives = 382/480 (79.58%), Query Frame = 1
Query: 1 MATNATTENGSTDADALNSSPQLA-CEAAAEPDSTEAGGAESDIDPSNQDYLSAPASDYV 60
MATN T NG T A +S P + AAA + +A E N++ S PA
Sbjct: 1 MATNEPTANGVTKAPKSDSQPIPSDATAAASTANEKAPVTEPGHATGNRNMESEPAPPGE 60
Query: 61 PHESP-NHAGAS-----DKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRAR 120
E+P ++AG + DKKW GWPGDCVFR+IVPV+KVGSIIGR+G+LIKK+CEETRAR
Sbjct: 61 SGEAPASNAGTTATTDADKKWLGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRAR 120
Query: 121 IRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRL 180
IRVLDGAVGTPDR+VLISGKEEPEA LSPAMDAV+R+FKRVSG SENE A +FCS+RL
Sbjct: 121 IRVLDGAVGTPDRIVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENE-AAGVAFCSIRL 180
Query: 181 LVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKA 240
LVASTQAINLIGKQGSLIKSIQESTGASVRVL+GDE+PFYA DER+VELQGE LKVLKA
Sbjct: 181 LVASTQAINLIGKQGSLIKSIQESTGASVRVLTGDEVPFYAAADERIVELQGEGLKVLKA 240
Query: 241 LEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISNEYPPSS 300
LEAV+GHLRKFLVDHSV+PLFEKS+N+ SQ+RQ D WADKS L +++Q+ + YP ++
Sbjct: 241 LEAVIGHLRKFLVDHSVIPLFEKSYNSTISQERQVDTWADKSMLQASTQTGVGTNYPITA 300
Query: 301 KRESLFFDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSY 360
KRE F +RET L+ + SSGIS+YG D LP IR +G GR+G PIVTQ+ QTMQIPLSY
Sbjct: 301 KREPYFLERETQLEPQLPSSGISMYGQDTSLPGIRPTGFGRAGAPIVTQIAQTMQIPLSY 360
Query: 361 AEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGP 420
AEDIIG+ G+NIA+IRR SGAILT+QESRGLPDEITVEIKGTSSQVQ+AQQLIQE I+
Sbjct: 361 AEDIIGIEGSNIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQLAQQLIQEVINNH 420
Query: 421 KEPVTSSSYGRLDTTGLRSSYSQLGASGSSYTPS-SLSSQSY--GGYGSSGLGGYSTFRL 471
KEPV SS YGR+DT LRS+YSQL SSY P+ SL +SY GGYGSSGLGGYSTFRL
Sbjct: 421 KEPVPSS-YGRIDTA-LRSNYSQLS---SSYPPTTSLPPRSYSGGGYGSSGLGGYSTFRL 474
BLAST of Cp4.1LG07g07550 vs. NCBI nr
Match:
gi|225445949|ref|XP_002264417.1| (PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera])
HSP 1 Score: 580.5 bits (1495), Expect = 2.7e-162
Identity = 325/478 (67.99%), Postives = 380/478 (79.50%), Query Frame = 1
Query: 1 MATNATTENGSTDADALNSSPQLACEAAAEP-DSTEAGGAESDIDPSNQDYLSAPASDYV 60
MAT TTE + A + E + P ++ A AES+ PS + +
Sbjct: 1 MATTGTTEPAPVNGAAQSPGSDPKTELSETPLSASNAATAESEQAPSE----NLESESTA 60
Query: 61 PHESPNHAGASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDG 120
P E+ A AS+KKWPGWPGDCVFR+IVPV+KVGSIIGR+G+LIKK+CEETRARIRVLDG
Sbjct: 61 PPETEAPAPASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDG 120
Query: 121 AVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKA------SFCSVRL 180
AVGT DR+VLISG+EEPEAPLSPAMDAV+R+FKRV+G SE+E + KA +FCS+RL
Sbjct: 121 AVGTSDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRL 180
Query: 181 LVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKA 240
LVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDE+PFYA DER+VELQGE LKV KA
Sbjct: 181 LVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKA 240
Query: 241 LEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISNEYPPSS 300
LEAVVGHLRKFLVDHSVLPLFE+++N SQDRQ+D WADKS L SQ+ + ++Y +
Sbjct: 241 LEAVVGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADKSLLHGTSQTGMGSDYSLPA 300
Query: 301 KRESLFFDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSY 360
KRESL+ DRET ++ SG+ +YG + L IRSSG+GR+G PIVTQ+ QTMQIPLSY
Sbjct: 301 KRESLYLDRETQMEH----SGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSY 360
Query: 361 AEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGP 420
AEDIIG+GGANIA+IRR SGAILT+QESRGLPDEITVEIKGTSSQVQ AQQLIQE IS
Sbjct: 361 AEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFISNH 420
Query: 421 KEPVTSSSYGRLDTTGLRSSYSQLGASGSSYTPSSLSSQSY-GGYGSSGLGGYSTFRL 471
KEPV SSYG++D +GLRSSYSQLG +SY+ SSLSSQ Y GGYGSSG+GGYS++RL
Sbjct: 421 KEPV-PSSYGKMD-SGLRSSYSQLG--NTSYSSSSLSSQPYGGGYGSSGVGGYSSYRL 466
BLAST of Cp4.1LG07g07550 vs. NCBI nr
Match:
gi|470120836|ref|XP_004296493.1| (PREDICTED: poly(rC)-binding protein 3 [Fragaria vesca subsp. vesca])
HSP 1 Score: 562.0 bits (1447), Expect = 9.9e-157
Identity = 320/493 (64.91%), Postives = 373/493 (75.66%), Query Frame = 1
Query: 1 MATNATTENGSTDADALNSSPQLACEAAA---EPDSTEAGGAESDIDPSNQDYLSAPASD 60
MAT +ENGS + P+ A A +P STE +NQD SAP SD
Sbjct: 1 MATTQPSENGSAKVTEPDPQPESAAATPAPDSDPLSTEI--------QNNQDSESAPKSD 60
Query: 61 Y---VPHESPNHAGASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARI 120
S + A+DK+WPGWPGDCVFR+IVPV+KVGSIIGR+G+LIKK+CEETRARI
Sbjct: 61 SEAPATTSSSDAVSAADKRWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARI 120
Query: 121 RVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKAS------F 180
RVLDGA GT DR+VLISG+EEPEAPLSPAMDAV+R+FKRVSG SEN +A+ S F
Sbjct: 121 RVLDGAAGTTDRIVLISGREEPEAPLSPAMDAVIRVFKRVSGLSENAGDAELSGAAGVAF 180
Query: 181 CSVRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETL 240
CS+R+LVASTQAINLIGKQGSLIKSIQEST ASVRVLSG+E+PFYA DER++E+QGETL
Sbjct: 181 CSIRMLVASTQAINLIGKQGSLIKSIQESTAASVRVLSGEEVPFYAAADERIIEMQGETL 240
Query: 241 KVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISNE 300
KVL+ALEAVV HLRKFLVDHSVLPLFEK++ P SQ+RQ D WADKS L +A+Q+V
Sbjct: 241 KVLRALEAVVSHLRKFLVDHSVLPLFEKTYTAPISQERQPDPWADKSLLHTATQTVGGTS 300
Query: 301 YPPSSKRESLFFDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQ 360
YP ++ RESLF RET L+S + SSG+S+YG + L ++RSSG+GR G PIVTQ+TQTMQ
Sbjct: 301 YPLTATRESLFLGRETQLESQLPSSGLSIYGQEAALSSLRSSGLGRPGAPIVTQITQTMQ 360
Query: 361 IPLSYAEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQE 420
IPLSYAEDIIGV G +I FIRR+SGA+LT+QESRGLPDEITVEIKGTSSQVQ AQQLIQE
Sbjct: 361 IPLSYAEDIIGVEGRSIEFIRRSSGALLTVQESRGLPDEITVEIKGTSSQVQAAQQLIQE 420
Query: 421 AISGPKEPVTSSSYGRLDTTGLRSSYSQLGASGSSYTPSSLSSQSYG----------GYG 471
I+ + SSYGR+D TGLRSSYSQL +SY SS+S Y YG
Sbjct: 421 VIATSNKDQIPSSYGRMD-TGLRSSYSQL--DSTSYPSSSVSLLPYDVYGNSLPSQQPYG 480
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PEP_ARATH | 7.6e-125 | 57.47 | RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana GN=PEP P... | [more] |
| FLK_ARATH | 5.2e-73 | 41.53 | Flowering locus K homology domain OS=Arabidopsis thaliana GN=FLK PE=1 SV=1 | [more] |
| HEN4_ARATH | 3.1e-17 | 27.57 | KH domain-containing protein HEN4 OS=Arabidopsis thaliana GN=HEN4 PE=1 SV=1 | [more] |
| Y4837_ARATH | 5.3e-17 | 25.75 | KH domain-containing protein At4g18375 OS=Arabidopsis thaliana GN=At4g18375 PE=2... | [more] |
| PCBP3_HUMAN | 9.0e-17 | 27.51 | Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LMH4_CUCSA | 2.1e-222 | 87.66 | Uncharacterized protein OS=Cucumis sativus GN=Csa_2G061550 PE=4 SV=1 | [more] |
| W9SIR6_9ROSA | 2.2e-163 | 68.75 | Poly(RC)-binding protein 3 OS=Morus notabilis GN=L484_005636 PE=4 SV=1 | [more] |
| F6GXK2_VITVI | 1.9e-162 | 67.99 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00030 PE=4 SV=... | [more] |
| A0A067F3I5_CITSI | 3.4e-156 | 65.06 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012307mg PE=4 SV=1 | [more] |
| V4U0W5_9ROSI | 3.4e-156 | 65.06 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008200mg PE=4 SV=1 | [more] |
