CmoCh05G007520 (gene) Cucurbita moschata (Rifu)

NameCmoCh05G007520
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPoly(RC)-binding protein 3
LocationCmo_Chr05 : 4002282 .. 4009854 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCTCTTCCTTAATTTTCTTAAAACCTCTGCAACTCTTAACCCTAACTCAATAGACTCTTCATCTTTCTCGATGGCCACCAACACAGCTACAGATAATGGCTCCACTGATGCCAACGCCCTCAATTTCAACCCCGAAAGCTCCCCACTTGCCTCTGTAGCTGCTGCAGAACCAGACTCTATGGAAGCCGGTGGCGCTGAATCCGACCTCGATCCCTCTAACCAAGACTACTTGTCTGCCCCGGCTTCGGATTCTGCAGACCATGATGAAAGCCCCAACCATACCGACGCTTCCGATAAAAAGTGGCCCGGATGGCCCGGAGACTGCGTGTTTCGGCTTATTGTACCGGTCGTTAAAGTTGGAAGCATTATTGGGCGCAAGGGCGATCTTATCAAGAAGATGTGCGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGTGTTGTGAGTGTTTCTTTTAACCTGACCTCTCTCTGGTACCTGTTTTTTTTTTCGAGTCAAAAGCAATCTCCATTTTTGGGTCCCGAGGTTTCGGGGGGAAAAAAGAGAGATCAGTCTCCCATCGTTGGTTGGTTCCATGGATTTCACAGTAGTTAGTCATAACAAGTTATTTTCTAATTCTTTAACAGAAGCCGCAGAATCTCTGTATATTAGGTTAACTAGAATATCAATTGAACTTATTGGGGAACAAAAGGAGCTTATGTTAAACCTTTTTTTGGTTGTTCAATTGAATCTTGATCTATAATGGAGGAGGTGCTTCTGAATTCTTCCTTTAGGGAGAAGTTCTAGCTTTTGTGCAATTTTGTGGGACATTGGTGCGAGTGGAATAATAGAATCTTTAGAGAGGTGGAGAGATCAGGTGGGGAGGTTTAGGAGGTGGCTATGTTTGATGCCTCCTTGGTTGTGTCTTTCACTACGTTTTTTTATACTTATGAGCTTGGTCTTATTCTTTTGGATTTGAGCCCTTTTCTGTAGTTAGGGTTAAGACTCTTTTTTTTTTTTTTTTGAGCTTGTTTTTGCATGCACTTGTATATTCTTTCATTTCTATTAACGGAAGCGTGATTTCCGTCCATTTTTCTTGGAAGATTAATTCTTTGTACATTGGTTTGAAATGCAGATGTAAGTTCTTATATTTTTTAAGAACACGACAACTTGATATCGTTCTTTGAGTCACTTCTTTAGGAGTAAAAACTTGAAGCATTTTCCATGGTGGCATAAGCCTCTTGTAACCCAAAGTAGGCGTAATTTTGTAATTTTTGTTAGGCTTGATTTTTATGGAGTGGAGTTTTTGTGTGTGTGTATTTAGTCTAGATCTTGTTTTGGCTTCTTTTATTGGGCTGTCTCTTTTTCTTTTTTCTTTTATACTCTTGTATTCTTTCAATTTTCTCAATGAAAGCTCTGTTCTCCATTGAGAAAAAATCCAATACTTGAGGCCAAACATGACAGTAATCTGACTATTAACTTCCATAAAGAATGTTTTTTTCTGTAGGTTGTTTTGAACTTCATTTTGTATATTGACCAGGCACTTCTTGATTGTCCTGTAAATTTTAGAAGATGTTGACATGTAATTGGTTTTTTTAGACTATACACTATGTACTTTCAGGAGTGCCCAAATGATTTTGATTAGGTTCAATGAAGAACTGTAATATATAGAAGAGAGGCATAGCTTTTCCTTATAAGAGGCTGGTGCAATTACGTTTTAATTCTGTGATGCTTCACTTTGATTTGCAAGAACACTTGGATGCATTTTTGGCAATTTCTTTGAAGTAGGAGGTCTTGTTCAAACTTGTACGTTCAGTTTTTAATGTTTGGAAGTTTACTTCAGGTGCTAATTTCAGGAAAAGAAGACCCTGAGGCACCCCTTTCCCCTGCTATGGATGCAGTTATAAGAGTCTTCAAACGTGTGTTCTTATTTTCTGAGAATGAAGACGAGGCTAAAACCTCATTTTGTTCAATTCGGCTACTGGTTGCATCAACTCAAGCAATCAATCTAATTGGAAAGCAGGGTTCATTAATCAAATCTATACAGGAGAGTACAGGAGCCTCTATAAGAGTATTATCAGGAGGTATGCGTTCATTTTCTGTTATGCACTTGCCATTCTCTTTTATTGATTGATTTTGAGCCTAGCTGTACTATTTTCAAAGATCATGAAATCTACCAGATAGCTAAGTTATAGAGTATCAGAAAGGCTGTTATTTAGAGAAAGGCAGTTATTTAGAGAACCTCCAAAACCTTTCTGCAAGAGAAGGATCATTCTAAGGACTAATAATGCCACAAAAGATCCAAGGGAATCAATAGAAGACCCCCGTTATTGTGAGAAATGCAAATGGGTCTGATAAAAATCTGTCCAGCGTACTAAGCTTTGATTTTGGCAAGAGAACTATCCTGAGCATTATTAACTTTAGTGTTTTTGATAAGATACACCATAACCCTTATTCCTAAACCCCTTTCATTTTAGTCCAATTTCGTATTGATCAGTTATTCGACTAGAGAAGTGATTTGGTTAGGAAGAATTGCTTGTTTCACCCATAATTTTGGGATCAAATGTTTGGAAGAAGTGGAAATTTGGGATGTCTCATTGCAAGATTGCAACCTCAAAAGTTGTGCTGTGTAAGAGTTAGAGTTTGATAGTGCATAGGAACAGGATACTGAAAGAGCAGTGCTCGGCCCCTTTCCATATAAATAATTAGAGTCTCTTATTGAAAGAGCAGGGTCCCAATGACTAGATAGTAAGTCCTTGAAGAAAATATCAATAAGAATCACTAGCCTTAATAGGGATCACATTTTACCTTTTACCATTGAGCTAAATGTACCTTCCCTTTTTTCCCTAAAGAAAAGCCTCTTCTTTAAAAGATACGCAGGTATATATCCACAGAAATTGATCTTATGTTTTCCATCTTGATATTTCCTACAAGACTCCAGAGCTCCATGGTCTCCCTAGCTCGCACTCACTGTCTGCCTAGCTGCAAGCTAATTCTTGTTCCTCGTTTCACATGGCAATGGTCACCCGTTACCATCGTTTAATCCTTTGGGGTTATTGAATGTGCACACACACTTGGTGACCTACAAGCCTTGTCTTGTTTTTTGAGTTCAATGATGTGTGGGGATGATGATTTGAACTTTTGACTTTTTGGTCGAAGTGATAATGCCTAAATCAGTTTAGTTATTGCCAGGTTGGCAGCAGTCTTGTCACCACACATGTGAACTTGATTGATATAGGTGGCATGCCCAACAAGTGTCATGCTGACTTAGCATATTACTGTCCACATCGCACATGGTCAGTTAACCTTGTTGACATCACCATGAGACATCGGATTCACCCTTTGCTAGTGATTAAAAGGTGTGTGCTTATGCGGCATAAGTGATATATATATATATATATATATATATATTTTGTTTAAAAAATAAAGGAAAATATAGACCCCCATTTTTAGTCAATCTCTTACAAAAGCTCTCATTCTCTTTCTAAAAATTTCGTACCCCCATCATTTGTGTACTATACATTTTCATATGTTAAAAAAATGTTATTAATATATTTTTTTTAATTTTGTACTCCACTGAAAAGGTTCTCCCTTGCTCAAAGGGCTTAACATTTTTCTTATGCACGTTGTATATTCTTTCAGTTGCACTATGAAAGTTTGTATTTTTTAAAGAAGGATACTGTGTGTCATGCGATTTGAAAACAGTAGCCTAGGCACGACATGAGCCTCCAAGCTTTGTCACTGGGCATTCACCTCAATAGTCCGAGAGCTAGGATATTAAATCAAATCTAAGAAACTGAAAACAAAACTGCAAAACACAATCATCCTCTATCAATCTTCCCCCTGTCTTCTACCATCCCCCATTTTGAGGGAGTAGGCTGGGGTGAACGAATACTTGCTTTTAACCACCTTATGCCAAAGGTATAGGCAGGTATATATCCACAGAAATTGATCTTATGTTTTCCATCTTGATATTTCCTACAAGACTCCCGAGCTCCATGGTCTTCCTATTAACCAAGTGCTACCTCACTATAGGCAATTTGGGTTAATAAAGATAAGTAATTGGGATCTTAGCAGGTCCAGATTAAGTACTTCTTGACCCTTCAGAAAGTAGCCCCCTACCCTCCACCCAATCTTTTTAATTTTCAGTGACCATATTAACCATTGAATTTTGAAATTCCAAGGACTGGGGTTTATCTTCAATGAGATCTCCTAATACTTTTATGGTCCAAATAGCAATCAAGGTGTTGTCCATTGTATGTTTCACATTGCTTGTCCCAACCTTAGAGCTTGTGTTCCATTTATTAGGCTTTTTTTTTTGGTAATTATTAGCTTAGTATTATTCTTTTGAATTGGAGCATATTCTTGTCGGTTGTTGAGCTTGTTTTTTATTTTTTTTTTGTATGGCCTTTTATATTCTTTCATTTTTCTCAATGAAAGCTCGGTTTCTTGCATTGGAAAAACTTCCAACTTGCATTAGGGATATTAAACAAGCAAACAAATAGACATCAGCTACAATAGTTCAAAGGTATGGTGATTAGAAAATTATTTGCCTCAATCCCTTGGATGCAGCTTTGTTCTGGTGAGTTTTATCCCCATTACTTCATCAAAGTTGCTGCCAAACAAAATTTGAATCTAGAAATATGATTTTGTTGAGTTTTATTGCTGGACACAAAGGCTACAGGGAGACGATCGTTGAGTTCCTTCTCCATCCACCTTTTCAAGAGAAGGGGAGGTTTTTGTGGCAAGCAGGAGTTTGTGTTGTGTTGTGAGGCTTATGGGGTGACAGGAATAATAGGATCTTTAGGGAAGTTGTGAGGGACCCCTTGTTAGGTTCTTTGTTTCTCTTTGGGCAAAAAGACTTTTTGTAATTATTCTTTACGTTTTATTTACTTAATTGGAACCCACTCCTTTGTTGGGTTTGGTTCTTTTAGATGCTCTAATGTTCTTTCATTTTTTTTCAATGAAAGTTCAGTTCTTTTTTTTCAACTTTTTGCCTGTGTTTTGAGCCTTGTAGCATTAGGAAAATGTAACGTGTGAGACCTTTCATTTAAAGAGACCCCATTGCTAACTTTATTTTTTTTAATGAATTTATATGCAAATGAGAACATAAACTGTCTCTTCAAAATTGGAGGATTTAGTATAGTTTCATTCTTGAGTTTTGAGTTTTATCTGGTCATCTTAGAGAAGCATGCTTATTGTGATTCACTGACGTCTTTCTCTTGCTCATACATGATAAAAACGACCTATAAAAGAAAAAGTACATGACAATAGCTAGATAAAATAAGAATTATTTTTTACCTCAATTATATTGTTATAAAACAAAGTGACCAAGCATGATGACTATTAACTTCAAGCCTTGAGCTTCAGTCAGCAGGACATGTAACTAATAATGTCCCGAGATAATAATACATTTCCTCCTAGTGTTATTCATCCATGAGTGCTCTCTGAACATTCCCATATTCATCTACATTTGATGCTTGCAGATGAGATGCCGTTCTATGCTGGTGCAGACGAGAGAATGGTTGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCCCTAGAGGCAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCGTAGTGTTCTTCCTCTGTTTGAAAAAAGTGTTAAGTTTTTTCTTGTTAGATCTGTGACCAACCTTTTTCTTTTACCATATTTTAGGACTGGTAATGAATTGTTGCTACTTTTTTTTTTTTTAGTTTAATATACCTCCCTCACAAGATCGCCAAATGGATGCCTGGGCTGACAAGTCCTCACTTCTTACTTCATCTCAAAGTGTGATCTCTGCCGAGTATCCTTCATCTACAAAAAGAGAATCCCTATATCTTGACCGAGAAGCTTATCTTGATTCTTATATTCCATCCTCTGGTATTTCTCTATATGGGCAAGAGCGAGTACTTCCTACAATTCGATCATCGGGTGTTGGTCGCTCTGGGGGACCTATTGTAACTCAGGTTGGTATGTGTAGCTCATTTATCCAGTTATTGGTAGAAGGAAATGGTCTATGTTGACTTAGTGAGGTGGCAAACTTCCTCACCTGCTGACCTCCAGAAGACCATTCAGTCATTGCATGTCCGTTATTACAATTAGGTGATTTGTTTTTCATCTTCAGGTCCAGGCAAGCTAGAAGCTTCTCAGTTTACATGTCCATCTTGTCTTGGAAACACTAGGTCCAAAATATTTAGCATATGCATACAAGTATTATAGATTTTAGCATAACTGAATGGAGGCAGTGGGGACAGGATAGTTACAGAGTCATGTCTTTGTAGTTTGTTATATCTGATTAAGTGACCTCCTTGTGGTTCCTGTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGACATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCTGACGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGTAATATTTAAGTTTCCCGTTTGACTTATAACTTGGTGGTTAAGAGCTAGTATGTGGTCGATAGAGTTGTGATGGGGTACTCTGTTTCTCACGTCTTGCATAAAGCTACTTTTATTACATTTTGTAATTCTCTCCTTGGCCAAAGCTTTAGCCTCACTAGACTCGACAGTTTTTTGTATCATTGTGGATCACTAAGAGAGGGGGAGAGAGAGAGAGAGCGAGAGAAAGGAGAGAGGAGAGGAGAGGAGAGGGGAGAGGAGAGGGGAGAGGAGAGAAGAGCCTATTTGTAACATAGATCTAGTATCTTTCAAATGCTCCATAGAACTCGTTGCTTTCAAAGTTCACCCATGCTTACCGTTGTTGTTTAGTGGTGCATAAGTTTGGTGATGATTATTGTCAATTGAATTGAAGTCTAAAAATAAACTTGAAATTGAATTTAATGGAGATTTGTTATCTCAATGCAACATTTTCCACTACTTAAAAATTGGGAGCAGTTGTACCCTGTTCTAGATATTTAAAAATAGCTGGAACGGATGCTTAAGCTGTCTTTTGTCAGTGTTTTAAAAACAAAACATTACTTACTCAGCATCAAATACATGTTTAAGATAGAAAAGGATTGTGATTCTCCCGCCTCAAGAATATCCCAACTCAAATAGCTCTATGACTTATCTGTTGATGATAAAAAATTAGGGTAATGTTTACATATTTACGATTCTTTTTGGCTTGTAGGAAGCAGTAAGTGCTCCCAAGGAACCAGTAACAAGCAGCAGCTATGGCAGGCTAGACACCTCAGGCATGAGGTCTTCTTACTCCCAGTTGGATGCTGCAGGTTCATCCTATACTTCATCCTCTTTATCTTCACAATTATATGGTGGATATGGATCTTCTGGGTTAGGAGGCTACAGTACCTTCAGGCTCTGAACTGATTGATCTGCAGATTCGCACCCACTCGGATTTTCTCCGCCTCAGATTAATTCTTGTTAAGATAACGGATGAATTATTTTGGAACGTAGTCGTTGTAAAGTCAGCCTAA

mRNA sequence

TTTCTCTTCCTTAATTTTCTTAAAACCTCTGCAACTCTTAACCCTAACTCAATAGACTCTTCATCTTTCTCGATGGCCACCAACACAGCTACAGATAATGGCTCCACTGATGCCAACGCCCTCAATTTCAACCCCGAAAGCTCCCCACTTGCCTCTGTAGCTGCTGCAGAACCAGACTCTATGGAAGCCGGTGGCGCTGAATCCGACCTCGATCCCTCTAACCAAGACTACTTGTCTGCCCCGGCTTCGGATTCTGCAGACCATGATGAAAGCCCCAACCATACCGACGCTTCCGATAAAAAGTGGCCCGGATGGCCCGGAGACTGCGTGTTTCGGCTTATTGTACCGGTCGTTAAAGTTGGAAGCATTATTGGGCGCAAGGGCGATCTTATCAAGAAGATGTGCGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGTGTTGTGCTAATTTCAGGAAAAGAAGACCCTGAGGCACCCCTTTCCCCTGCTATGGATGCAGTTATAAGAGTCTTCAAACGTGTGTTCTTATTTTCTGAGAATGAAGACGAGGCTAAAACCTCATTTTGTTCAATTCGGCTACTGGTTGCATCAACTCAAGCAATCAATCTAATTGGAAAGCAGGGTTCATTAATCAAATCTATACAGGAGAGTACAGGAGCCTCTATAAGAGTATTATCAGGAGATGAGATGCCGTTCTATGCTGGTGCAGACGAGAGAATGGTTGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCCCTAGAGGCAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCGTAGTGTTCTTCCTCTGTTTGAAAAAAGTTTTAATATACCTCCCTCACAAGATCGCCAAATGGATGCCTGGGCTGACAAGTCCTCACTTCTTACTTCATCTCAAAGTGTGATCTCTGCCGAGTATCCTTCATCTACAAAAAGAGAATCCCTATATCTTGACCGAGAAGCTTATCTTGATTCTTATATTCCATCCTCTGGTATTTCTCTATATGGGCAAGAGCGAGTACTTCCTACAATTCGATCATCGGGTGTTGGTCGCTCTGGGGGACCTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGACATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCTGACGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGAAGCAGTAAGTGCTCCCAAGGAACCAGTAACAAGCAGCAGCTATGGCAGGCTAGACACCTCAGGCATGAGGTCTTCTTACTCCCAGTTGGATGCTGCAGTACCTTCAGGCTCTGAACTGATTGATCTGCAGATTCGCACCCACTCGGATTTTCTCCGCCTCAGATTAATTCTTGTTAAGATAACGGATGAATTATTTTGGAACGTAGTCGTTGTAAAGTCAGCCTAA

Coding sequence (CDS)

ATGGCCACCAACACAGCTACAGATAATGGCTCCACTGATGCCAACGCCCTCAATTTCAACCCCGAAAGCTCCCCACTTGCCTCTGTAGCTGCTGCAGAACCAGACTCTATGGAAGCCGGTGGCGCTGAATCCGACCTCGATCCCTCTAACCAAGACTACTTGTCTGCCCCGGCTTCGGATTCTGCAGACCATGATGAAAGCCCCAACCATACCGACGCTTCCGATAAAAAGTGGCCCGGATGGCCCGGAGACTGCGTGTTTCGGCTTATTGTACCGGTCGTTAAAGTTGGAAGCATTATTGGGCGCAAGGGCGATCTTATCAAGAAGATGTGCGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGTGTTGTGCTAATTTCAGGAAAAGAAGACCCTGAGGCACCCCTTTCCCCTGCTATGGATGCAGTTATAAGAGTCTTCAAACGTGTGTTCTTATTTTCTGAGAATGAAGACGAGGCTAAAACCTCATTTTGTTCAATTCGGCTACTGGTTGCATCAACTCAAGCAATCAATCTAATTGGAAAGCAGGGTTCATTAATCAAATCTATACAGGAGAGTACAGGAGCCTCTATAAGAGTATTATCAGGAGATGAGATGCCGTTCTATGCTGGTGCAGACGAGAGAATGGTTGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCCCTAGAGGCAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCGTAGTGTTCTTCCTCTGTTTGAAAAAAGTTTTAATATACCTCCCTCACAAGATCGCCAAATGGATGCCTGGGCTGACAAGTCCTCACTTCTTACTTCATCTCAAAGTGTGATCTCTGCCGAGTATCCTTCATCTACAAAAAGAGAATCCCTATATCTTGACCGAGAAGCTTATCTTGATTCTTATATTCCATCCTCTGGTATTTCTCTATATGGGCAAGAGCGAGTACTTCCTACAATTCGATCATCGGGTGTTGGTCGCTCTGGGGGACCTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGACATCATTGGGGTTGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCTGACGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGAAGCAGTAAGTGCTCCCAAGGAACCAGTAACAAGCAGCAGCTATGGCAGGCTAGACACCTCAGGCATGAGGTCTTCTTACTCCCAGTTGGATGCTGCAGTACCTTCAGGCTCTGAACTGATTGATCTGCAGATTCGCACCCACTCGGATTTTCTCCGCCTCAGATTAATTCTTGTTAAGATAACGGATGAATTATTTTGGAACGTAGTCGTTGTAAAGTCAGCCTAA
BLAST of CmoCh05G007520 vs. Swiss-Prot
Match: PEP_ARATH (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana GN=PEP PE=1 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 2.4e-121
Identity = 234/384 (60.94%), Postives = 298/384 (77.60%), Query Frame = 1

Query: 54  LSAPASDSADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEE 113
           L+ P S +A     P+  D+++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEE
Sbjct: 43  LNQPDSLAAAETTFPDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEE 102

Query: 114 TRARIRVLDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDE----AK 173
           TRARI+VLDG V TPDR+VLISGKE+PEA +SPAMDAV+RVF+RV    +N+D+    A 
Sbjct: 103 TRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAG 162

Query: 174 TSFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQG 233
           + F S+RLLVASTQAINLIGKQGSLIKSI E++GAS+R+LS +E PFYA  DER+V+LQG
Sbjct: 163 SVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQG 222

Query: 234 ESLKVLKALEAVVGHLRKFLVDRSVLPLFEKSFNIPPSQDRQMDAWAD-KSSLLTSSQSV 293
           E+LK+LKALEA+VGHLR+FLVD +V+PLFEK +    SQ RQ +  A+ KSSL T S ++
Sbjct: 223 EALKILKALEAIVGHLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL 282

Query: 294 ISAEYPSSTKRESLYLDREAYLDSYIPSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVT 353
           +  ++    +RE L+L+R++ +DS +  SG+S+Y Q+ VL    S G+ R     VTQV+
Sbjct: 283 MEPDFSLLARREPLFLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVS 342

Query: 354 QTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ 413
           QTMQIP SYAEDIIGV G NIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+Q
Sbjct: 343 QTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQ 402

Query: 414 LIQEAVSAPKEPVT-SSSYGRLDT 432
           LIQE +   KEPV+ S  Y R+D+
Sbjct: 403 LIQEFIINHKEPVSVSGGYARIDS 425

BLAST of CmoCh05G007520 vs. Swiss-Prot
Match: FLK_ARATH (Flowering locus K homology domain OS=Arabidopsis thaliana GN=FLK PE=1 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 7.5e-75
Identity = 176/416 (42.31%), Postives = 241/416 (57.93%), Query Frame = 1

Query: 42  AESDLDPSNQDYLSAPASDSA---DHDESPNHTD--------ASDKKWPGWPGDCVFRLI 101
           A+ D+   N D +     D     +H ES   ++          +K+WPGWPG+ VFR++
Sbjct: 133 AQGDVQDHNGDEVQDKVEDEEGIPEHLESLQKSEPEEDATVGGEEKRWPGWPGETVFRML 192

Query: 102 VPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEDPEAPLSPAMDA 161
           VP  KVGSIIGRKGD+IKK+ EETRARI++LDG  GT +R V++SGKE+PE+ L P+MD 
Sbjct: 193 VPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDG 252

Query: 162 VIRVFKRVF--LFSENEDEAKTSFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASIRV 221
           ++RV  R+   L  E       S  S RLLV ++QA +LIGKQG  +K+IQE++   +RV
Sbjct: 253 LLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRV 312

Query: 222 LSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRKFLVDRSVLPLFEKSFNIPPSQ 281
           L  +++P +A  D+R+VE+ GE   V +ALE +  HLRKFLVDRS++P FE     P  Q
Sbjct: 313 LGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQ 372

Query: 282 DRQM----DAWADKSSLLTSSQSVISAEYPSSTKRESLYLDREAYLDSYI---------- 341
              M     +W         + SV    Y  +      Y+      DSY           
Sbjct: 373 MDHMPPPHQSWGPPQG---HAPSVGGGGYGHNPPP---YMQPPPRHDSYYPPPEMRQPPM 432

Query: 342 ---PSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAF 401
              P  GIS YG+E  +    +  V  +   +  QVTQ MQIPLSYA+ +IG  G+NI++
Sbjct: 433 EKQPHQGISAYGREPPM----NVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSNISY 492

Query: 402 IRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVS-----APKEPVT 423
            RR SGA +TIQE+RG+P E+TVE+ GT SQVQ A QLIQ  ++     AP +P T
Sbjct: 493 TRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMAEAGAPAPAQPQT 538

BLAST of CmoCh05G007520 vs. Swiss-Prot
Match: PCBP3_HUMAN (Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 2.2e-18
Identity = 94/336 (27.98%), Postives = 158/336 (47.02%), Query Frame = 1

Query: 88  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEDPEAPLSPA 147
           RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R+V I+G  D    +  A
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDA---IFKA 108

Query: 148 MDAVIRVFKRVFLFSENEDEAKTSF-CSIRLLVASTQAINLIGKQGSLIKSIQESTGASI 207
              +   F+   + S +   A +    ++RL+V ++Q  +LIGK GS IK I+ESTGA +
Sbjct: 109 FAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQV 168

Query: 208 RVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRKFLVDRSVLPLFEKSFNIPP 267
           +V +GD +P    + ER V + G    +++ ++ +   + +     + +P   K  + P 
Sbjct: 169 QV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 228

Query: 268 SQDRQMDAWADKSSLLTSSQSVISAEYPSS-TKRESLYLDREAY-----LDSYIPSSGIS 327
                   +A   +     Q  I   +P   TK   L + +  +      +   P   + 
Sbjct: 229 -------IFAGGQAYTIQGQYAIP--HPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLP 288

Query: 328 LYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAIL 387
           L+  E     +  S  G    P  +  T  + IP      IIG  GT I  IR+ SGA +
Sbjct: 289 LHSSEEAQNLMGQSS-GLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQI 348

Query: 388 TIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSA 417
            I  +     E  + I GT + + +AQ LI   +++
Sbjct: 349 KIANATEGSSERQITITGTPANISLAQYLINARLTS 363

BLAST of CmoCh05G007520 vs. Swiss-Prot
Match: PCBP3_MOUSE (Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=1 SV=3)

HSP 1 Score: 95.1 bits (235), Expect = 2.2e-18
Identity = 94/336 (27.98%), Postives = 158/336 (47.02%), Query Frame = 1

Query: 88  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEDPEAPLSPA 147
           RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R+V I+G  D    +  A
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDA---IFKA 108

Query: 148 MDAVIRVFKRVFLFSENEDEAKTSF-CSIRLLVASTQAINLIGKQGSLIKSIQESTGASI 207
              +   F+   + S +   A +    ++RL+V ++Q  +LIGK GS IK I+ESTGA +
Sbjct: 109 FAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQV 168

Query: 208 RVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRKFLVDRSVLPLFEKSFNIPP 267
           +V +GD +P    + ER V + G    +++ ++ +   + +     + +P   K  + P 
Sbjct: 169 QV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 228

Query: 268 SQDRQMDAWADKSSLLTSSQSVISAEYPSS-TKRESLYLDREAY-----LDSYIPSSGIS 327
                   +A   +     Q  I   +P   TK   L + +  +      +   P   + 
Sbjct: 229 -------IFAGGQAYTIQGQYAIP--HPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLP 288

Query: 328 LYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAIL 387
           L+  E     +  S  G    P  +  T  + IP      IIG  GT I  IR+ SGA +
Sbjct: 289 LHSSEEAQNLMGQSS-GLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQI 348

Query: 388 TIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSA 417
            I  +     E  + I GT + + +AQ LI   +++
Sbjct: 349 KIANATEGSSERQITITGTPANISLAQYLINARLTS 363

BLAST of CmoCh05G007520 vs. Swiss-Prot
Match: Y4837_ARATH (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.4e-17
Identity = 112/407 (27.52%), Postives = 185/407 (45.45%), Query Frame = 1

Query: 86  VFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLI--SGKEDPE-- 145
           V+R++ P+  VG +IG+ G +I  +   T+A+I+V D   G   RV+ I  S KE  E  
Sbjct: 37  VYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEI 96

Query: 146 -------APLSPAMDAVIRVFKRVFLFSENEDEAKTSF-----CSIRLLVASTQAINLIG 205
                   PL  A DA+++V+  + + S+ E+  KT+         RLLV  +Q+ +LIG
Sbjct: 97  GFTKSENEPLCCAQDALLKVYDAI-VASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIG 156

Query: 206 KQGSLIKSIQESTGASIRVLSGD-EMPFYAGADE--RMVELQGESLKVLKALEAVVGHLR 265
           K G  IK I+  T AS++V+S D   P +  A E   +V + GE   V +AL AV   + 
Sbjct: 157 KAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMY 216

Query: 266 KFLVDRSVLPLFEKSFNIPPSQDRQMDAWADKSSLLTSSQSVISAEYPSS--TKRESLYL 325
           K +  R  +PL   S ++P +           S ++ S  S  ++ YP +     +   L
Sbjct: 217 K-INPRENIPLDSTSQDVPAA-----------SVIVPSDLS--NSVYPQTGFYSNQDHIL 276

Query: 326 DREAYLDSYIPSSGISLY-----GQERVLPTIRSS---GVGRSGGPIVTQVTQTMQIPLS 385
            + A + SY  +  +S +          +P   SS     G  G     ++   +  PL 
Sbjct: 277 QQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCPLC 336

Query: 386 YAEDIIGVGGTNIAFIRRNSGAILTIQESRGL--PDEITVEIKGTSSQVQMAQQLIQEAV 445
               +IG GG+ I  IR  SG+ + + +SR     DE  + +  T S   M    + EAV
Sbjct: 337 NIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAV-EAV 396

Query: 446 SAPKEPVTSSSYGRLDTSGMRSSYSQLDAAVPSGSELIDLQIRTHSD 462
              +E +       +    + SS         SGS + +++ RT+++
Sbjct: 397 LLLQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNAN 427

BLAST of CmoCh05G007520 vs. TrEMBL
Match: A0A0A0LMH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G061550 PE=4 SV=1)

HSP 1 Score: 725.3 bits (1871), Expect = 4.9e-206
Identity = 393/460 (85.43%), Postives = 412/460 (89.57%), Query Frame = 1

Query: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60
           MATNT T+NGSTDA     NP SS L S+AAAEPDS EAG  +SD DPSNQDY S P SD
Sbjct: 1   MATNTTTENGSTDAIP---NPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSD 60

Query: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
           SA H+ S NHT  SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV
Sbjct: 61  SAAHEPS-NHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180
           LDGAVGTPDRVVLISGKE+ E+PLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVA 180

Query: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEA 240
           STQAINLIGKQGSLIKSIQESTGAS+RVLSGDEMPFYAGADERMVELQGESLKVLKALE 
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEG 240

Query: 241 VVGHLRKFLVDRSVLPLFEKSFNIPPSQDRQMDAWADKSSLLTSSQSVISAEYPSSTKRE 300
           VVGHLRKFLVD SVLPLFEKSFN P SQDRQ + WADKSSLLT+SQS+ISAEY  STKRE
Sbjct: 241 VVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRE 300

Query: 301 SLYLDREAYLDSYIPSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360
           SL+LDREA+ DS+I SSGISLYGQ+RVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED
Sbjct: 301 SLFLDREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360

Query: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEP 420
           IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKEP
Sbjct: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEP 420

Query: 421 VTSSSYGRLDTSGMRSSYSQLDAAVPSGSELIDLQIRTHS 461
           VTSSSYGRLDT+G+RSSYSQL A   SGS      + + S
Sbjct: 421 VTSSSYGRLDTTGLRSSYSQLAA---SGSSFTSSSLSSQS 453

BLAST of CmoCh05G007520 vs. TrEMBL
Match: W9SIR6_9ROSA (Poly(RC)-binding protein 3 OS=Morus notabilis GN=L484_005636 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 5.6e-154
Identity = 308/457 (67.40%), Postives = 359/457 (78.56%), Query Frame = 1

Query: 1   MATNTATDNGSTDANALNFNP---ESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAP 60
           MATN  T NG T A   +  P   +++  AS A  +    E G A  +    N +   AP
Sbjct: 1   MATNEPTANGVTKAPKSDSQPIPSDATAAASTANEKAPVTEPGHATGN---RNMESEPAP 60

Query: 61  ASDSADHDESPNHTDAS---DKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEET 120
             +S +   S   T A+   DKKW GWPGDCVFRLIVPV+KVGSIIGRKG+LIKKMCEET
Sbjct: 61  PGESGEAPASNAGTTATTDADKKWLGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEET 120

Query: 121 RARIRVLDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCS 180
           RARIRVLDGAVGTPDR+VLISGKE+PEA LSPAMDAVIRVFKRV   SENE  A  +FCS
Sbjct: 121 RARIRVLDGAVGTPDRIVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENE-AAGVAFCS 180

Query: 181 IRLLVASTQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKV 240
           IRLLVASTQAINLIGKQGSLIKSIQESTGAS+RVL+GDE+PFYA ADER+VELQGE LKV
Sbjct: 181 IRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLTGDEVPFYAAADERIVELQGEGLKV 240

Query: 241 LKALEAVVGHLRKFLVDRSVLPLFEKSFNIPPSQDRQMDAWADKSSLLTSSQSVISAEYP 300
           LKALEAV+GHLRKFLVD SV+PLFEKS+N   SQ+RQ+D WADKS L  S+Q+ +   YP
Sbjct: 241 LKALEAVIGHLRKFLVDHSVIPLFEKSYNSTISQERQVDTWADKSMLQASTQTGVGTNYP 300

Query: 301 SSTKRESLYLDREAYLDSYIPSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQIP 360
            + KRE  +L+RE  L+  +PSSGIS+YGQ+  LP IR +G GR+G PIVTQ+ QTMQIP
Sbjct: 301 ITAKREPYFLERETQLEPQLPSSGISMYGQDTSLPGIRPTGFGRAGAPIVTQIAQTMQIP 360

Query: 361 LSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV 420
           LSYAEDIIG+ G+NIA+IRR SGAILT+QESRGLPDEITVEIKGTSSQVQ+AQQLIQE +
Sbjct: 361 LSYAEDIIGIEGSNIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQLAQQLIQEVI 420

Query: 421 SAPKEPVTSSSYGRLDTSGMRSSYSQLDAAVPSGSEL 452
           +  KEPV  SSYGR+DT+ +RS+YSQL ++ P  + L
Sbjct: 421 NNHKEPV-PSSYGRIDTA-LRSNYSQLSSSYPPTTSL 451

BLAST of CmoCh05G007520 vs. TrEMBL
Match: M5XYS8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004405mg PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 1.7e-150
Identity = 315/491 (64.15%), Postives = 370/491 (75.36%), Query Frame = 1

Query: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSME-AGGAESDLDPS-NQDYLSAPA 60
           MAT   T+NGS      +    +S   + +   P+S + A  A +D +P+ N +  S P 
Sbjct: 1   MATAQPTENGSAKVTEPDLQQPASETTTASITVPESDQTATTATADNNPNQNPEPDSGPQ 60

Query: 61  SDSADHDE----SPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEET 120
            +    +     S + T  +DK+WPGWPGDCVFRLIVPV+KVGSIIGRKG+LIKKMCEET
Sbjct: 61  PEPGAQETTTTVSGDATSIADKRWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEET 120

Query: 121 RARIRVLDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTS--- 180
           RARIRVLDGAVGTPDR+VLISG+E+PEAPLSPAMDAVIR+FKR+   +++E +AK S   
Sbjct: 121 RARIRVLDGAVGTPDRIVLISGREEPEAPLSPAMDAVIRIFKRISGLADSEGDAKVSGPA 180

Query: 181 ---FCSIRLLVASTQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQ 240
              FCSIRLLVASTQAINLIGKQGSLIKSIQESTGAS+RVLSGDE+PFYA A+ER+VELQ
Sbjct: 181 GVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAAEERIVELQ 240

Query: 241 GESLKVLKALEAVVGHLRKFLVDRSVLPLFEKSFNIPPSQDRQMDAWADKSSLLTSSQSV 300
           GE+LKVLKA+EAVV HLRKFLVD SVLPLFEK++N   SQ+RQ D WADKS L T+SQ+ 
Sbjct: 241 GEALKVLKAVEAVVAHLRKFLVDHSVLPLFEKTYNATISQERQPDTWADKSLLHTASQTG 300

Query: 301 ISAEYPSSTKRESLYLDREA-YLDSYIPSSGISLYG------------------------ 360
           +S  Y  S KRESL+LDRE    +S +PS+GISLYG                        
Sbjct: 301 VSTNYSLSAKRESLFLDRETQL-ESQLPSAGISLYGKDPSIYGKDPSIYGKDPSIYGQDP 360

Query: 361 ----QERVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAI 420
               Q+  L +IRSSG+GR G PIVTQ+ QTMQIPLSYAEDIIGV G+NIAFIRR+SGAI
Sbjct: 361 SIYGQDPSLSSIRSSGIGRPGAPIVTQIAQTMQIPLSYAEDIIGVEGSNIAFIRRSSGAI 420

Query: 421 LTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVTSSSYGRLDTSGMRSSYS 450
           LT+QESRGLPDEITVEIKGTSSQVQMAQQLIQE +++ KEPVT SSYGR+DT GMRSSYS
Sbjct: 421 LTVQESRGLPDEITVEIKGTSSQVQMAQQLIQEVINSRKEPVT-SSYGRIDT-GMRSSYS 480

BLAST of CmoCh05G007520 vs. TrEMBL
Match: F6GXK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00030 PE=4 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 3.8e-150
Identity = 307/457 (67.18%), Postives = 351/457 (76.81%), Query Frame = 1

Query: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60
           MAT   T+    +  A +  P S P   ++     +  A  AES+  PS         S+
Sbjct: 1   MATTGTTEPAPVNGAAQS--PGSDPKTELSETPLSASNAATAESEQAPSEN-----LESE 60

Query: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
           S    E+     AS+KKWPGWPGDCVFRLIVPV+KVGSIIGRKG+LIKKMCEETRARIRV
Sbjct: 61  STAPPETEAPAPASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKT------SFCS 180
           LDGAVGT DR+VLISG+E+PEAPLSPAMDAVIRVFKRV   SE+E + K       +FCS
Sbjct: 121 LDGAVGTSDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCS 180

Query: 181 IRLLVASTQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKV 240
           IRLLVASTQAINLIGKQGSLIKSIQESTGAS+RVLSGDE+PFYA ADER+VELQGE+LKV
Sbjct: 181 IRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKV 240

Query: 241 LKALEAVVGHLRKFLVDRSVLPLFEKSFNIPPSQDRQMDAWADKSSLLTSSQSVISAEYP 300
            KALEAVVGHLRKFLVD SVLPLFE+++N   SQDRQ D WADKS L  +SQ+ + ++Y 
Sbjct: 241 QKALEAVVGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADKSLLHGTSQTGMGSDYS 300

Query: 301 SSTKRESLYLDREAYLDSYIPSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQIP 360
              KRESLYLDRE  ++     SG+ +YGQE  L  IRSSG+GR+G PIVTQ+ QTMQIP
Sbjct: 301 LPAKRESLYLDRETQME----HSGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIP 360

Query: 361 LSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV 420
           LSYAEDIIG+GG NIA+IRR SGAILT+QESRGLPDEITVEIKGTSSQVQ AQQLIQE +
Sbjct: 361 LSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFI 420

Query: 421 SAPKEPVTSSSYGRLDTSGMRSSYSQLDAAVPSGSEL 452
           S  KEPV  SSYG++D SG+RSSYSQL     S S L
Sbjct: 421 SNHKEPV-PSSYGKMD-SGLRSSYSQLGNTSYSSSSL 444

BLAST of CmoCh05G007520 vs. TrEMBL
Match: A0A067F3I5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012307mg PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 2.6e-143
Identity = 290/453 (64.02%), Postives = 350/453 (77.26%), Query Frame = 1

Query: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60
           MAT   TDNGS +    +  PE++   S    E ++    G+E+    +  D  + P S 
Sbjct: 1   MATAETTDNGSINLPEPDPQPETATTES-PTTESEAPPTIGSENTEHTTESDS-ALPQST 60

Query: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
             D    P      +KKWPGWPG CVFR+IVPV+KVGSIIGRKG+LIKK CE+TRARI+V
Sbjct: 61  GPDAAAVPE-----EKKWPGWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKV 120

Query: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTS---FCSIRL 180
           LDG V +PDR+VLISGKE+PEAP+SPAMDA +RVFKRV    EN+ +AK S   FCS+RL
Sbjct: 121 LDGPVSSPDRIVLISGKEEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRL 180

Query: 181 LVASTQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKA 240
           LV STQAINLIGKQGSLIKSIQE++GAS+RVLS DE PFY   DER+VE+QGE+ KVLKA
Sbjct: 181 LVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKA 240

Query: 241 LEAVVGHLRKFLVDRSVLPLFEKSFNIPPSQDRQMDAWADKSSLLTSSQSVISAEYPSST 300
           LEAVVGHLRKFLVD+ VLPLFEK++N   SQ+RQ++ WADKSSL  ++QS IS EY  ST
Sbjct: 241 LEAVVGHLRKFLVDQGVLPLFEKTYNASISQERQVETWADKSSLHAATQSAISTEYTPST 300

Query: 301 KRESLYLDREAYLDSYIPSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSY 360
           +RESL+L+RE  L+S    SGIS+YGQ+  L TIRSS +GR+ GPIVTQ+TQTMQIP+SY
Sbjct: 301 RRESLFLEREPQLESRYRLSGISIYGQDPALSTIRSSALGRASGPIVTQITQTMQIPISY 360

Query: 361 AEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAP 420
           AEDIIGVGGT+I  IRR SGAI+T+QESRGLPDEITVEIKGTSSQVQ+AQQLIQE ++  
Sbjct: 361 AEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQLAQQLIQEYMNNH 420

Query: 421 KEPVTSSSYGRLDTSGMRSSYSQL-DAAVPSGS 450
           KE +T SSYG++DT G R SY QL +++ PS S
Sbjct: 421 KESIT-SSYGQIDT-GYRPSYPQLGNSSYPSSS 444

BLAST of CmoCh05G007520 vs. TAIR10
Match: AT4G26000.1 (AT4G26000.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 437.2 bits (1123), Expect = 1.3e-122
Identity = 234/384 (60.94%), Postives = 298/384 (77.60%), Query Frame = 1

Query: 54  LSAPASDSADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEE 113
           L+ P S +A     P+  D+++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEE
Sbjct: 43  LNQPDSLAAAETTFPDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEE 102

Query: 114 TRARIRVLDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDE----AK 173
           TRARI+VLDG V TPDR+VLISGKE+PEA +SPAMDAV+RVF+RV    +N+D+    A 
Sbjct: 103 TRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAG 162

Query: 174 TSFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQG 233
           + F S+RLLVASTQAINLIGKQGSLIKSI E++GAS+R+LS +E PFYA  DER+V+LQG
Sbjct: 163 SVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQG 222

Query: 234 ESLKVLKALEAVVGHLRKFLVDRSVLPLFEKSFNIPPSQDRQMDAWAD-KSSLLTSSQSV 293
           E+LK+LKALEA+VGHLR+FLVD +V+PLFEK +    SQ RQ +  A+ KSSL T S ++
Sbjct: 223 EALKILKALEAIVGHLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL 282

Query: 294 ISAEYPSSTKRESLYLDREAYLDSYIPSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVT 353
           +  ++    +RE L+L+R++ +DS +  SG+S+Y Q+ VL    S G+ R     VTQV+
Sbjct: 283 MEPDFSLLARREPLFLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVS 342

Query: 354 QTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ 413
           QTMQIP SYAEDIIGV G NIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+Q
Sbjct: 343 QTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQ 402

Query: 414 LIQEAVSAPKEPVT-SSSYGRLDT 432
           LIQE +   KEPV+ S  Y R+D+
Sbjct: 403 LIQEFIINHKEPVSVSGGYARIDS 425

BLAST of CmoCh05G007520 vs. TAIR10
Match: AT3G04610.1 (AT3G04610.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 282.7 bits (722), Expect = 4.2e-76
Identity = 176/416 (42.31%), Postives = 241/416 (57.93%), Query Frame = 1

Query: 42  AESDLDPSNQDYLSAPASDSA---DHDESPNHTD--------ASDKKWPGWPGDCVFRLI 101
           A+ D+   N D +     D     +H ES   ++          +K+WPGWPG+ VFR++
Sbjct: 133 AQGDVQDHNGDEVQDKVEDEEGIPEHLESLQKSEPEEDATVGGEEKRWPGWPGETVFRML 192

Query: 102 VPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEDPEAPLSPAMDA 161
           VP  KVGSIIGRKGD+IKK+ EETRARI++LDG  GT +R V++SGKE+PE+ L P+MD 
Sbjct: 193 VPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDG 252

Query: 162 VIRVFKRVF--LFSENEDEAKTSFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASIRV 221
           ++RV  R+   L  E       S  S RLLV ++QA +LIGKQG  +K+IQE++   +RV
Sbjct: 253 LLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRV 312

Query: 222 LSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRKFLVDRSVLPLFEKSFNIPPSQ 281
           L  +++P +A  D+R+VE+ GE   V +ALE +  HLRKFLVDRS++P FE     P  Q
Sbjct: 313 LGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQ 372

Query: 282 DRQM----DAWADKSSLLTSSQSVISAEYPSSTKRESLYLDREAYLDSYI---------- 341
              M     +W         + SV    Y  +      Y+      DSY           
Sbjct: 373 MDHMPPPHQSWGPPQG---HAPSVGGGGYGHNPPP---YMQPPPRHDSYYPPPEMRQPPM 432

Query: 342 ---PSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAF 401
              P  GIS YG+E  +    +  V  +   +  QVTQ MQIPLSYA+ +IG  G+NI++
Sbjct: 433 EKQPHQGISAYGREPPM----NVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSNISY 492

Query: 402 IRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVS-----APKEPVT 423
            RR SGA +TIQE+RG+P E+TVE+ GT SQVQ A QLIQ  ++     AP +P T
Sbjct: 493 TRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMAEAGAPAPAQPQT 538

BLAST of CmoCh05G007520 vs. TAIR10
Match: AT1G51580.1 (AT1G51580.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 110.9 bits (276), Expect = 2.2e-24
Identity = 103/376 (27.39%), Postives = 164/376 (43.62%), Query Frame = 1

Query: 52  DYLSAPASDSADHDE-SPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKM 111
           +Y S       DH   +P   D      P    +  FRL+ P  KVGS+IG+ G +++ +
Sbjct: 242 EYHSMEYHPQWDHPPPNPMPEDVGPFNRPVVEEEVAFRLLCPADKVGSLIGKGGAVVRAL 301

Query: 112 CEETRARIRVLDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKT 171
             E+ A I+V D    + +R+++IS +E+ E   S A D V+RV  R+         A  
Sbjct: 302 QNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQDGVMRVHNRIVEIGFEPSAAVV 361

Query: 172 SFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGE 231
           +    RLLV S     L+GK G LI  ++ +TGASIRV + D+   Y    + +V++ G 
Sbjct: 362 A----RLLVHSPYIGRLLGKGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGN 421

Query: 232 SLKVLKALEAVVGHLRKFLVDRSV--------LPLFEKSFNIPPSQ--DRQMDAWADKSS 291
              V  AL  ++  LR+ +    +         P F   +  PP     RQ  A  D+  
Sbjct: 422 LKTVQDALFQILCRLREAMFPGRLPFQGMGGPPPPFMGPYPEPPPPFGPRQYPASPDRYH 481

Query: 292 LLTSSQSVISAEYPSSTKRESLYLDREAYLDSYIPSSGISLYGQERVLP------TIRSS 351
                        P   +      DR     S+ P  GI  +    V P       +R+ 
Sbjct: 482 SPVGPFHERHCHGPGFDRPPGPGFDRPPSPMSWTPQPGIDGHPGGMVPPDVNHGFALRNE 541

Query: 352 GVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV 411
            +G S  P++T     + IP +Y   + G   +N+ +I++ SGA + + + +    E  V
Sbjct: 542 PIG-SENPVMTSANVEIVIPQAYLGHVYGENCSNLNYIKQVSGANVVVHDPKAGTTEGLV 601

BLAST of CmoCh05G007520 vs. TAIR10
Match: AT5G15270.2 (AT5G15270.2 RNA-binding KH domain-containing protein)

HSP 1 Score: 104.4 bits (259), Expect = 2.1e-22
Identity = 61/174 (35.06%), Postives = 98/174 (56.32%), Query Frame = 1

Query: 84  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEDP--- 143
           D VFR + PV K+GS+IGR GD++K++  +TR++IR+ +   G  +RV+ I    D    
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 144 ----EAPLSPAMDAVIRVFKRVF---LFSENEDEAKTSFCSIRLLVASTQAINLIGKQGS 203
               E  LSPA DA+ R+  RV      SE+  E +    + +LLV S Q   ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQ-VTAKLLVPSDQIGCILGRGGQ 168

Query: 204 LIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRK 248
           ++++I+  TGA IR++    MP  A   + ++++ GE L V KAL  +   L +
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE 221

BLAST of CmoCh05G007520 vs. TAIR10
Match: AT5G46190.1 (AT5G46190.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 102.1 bits (253), Expect = 1.0e-21
Identity = 100/332 (30.12%), Postives = 158/332 (47.59%), Query Frame = 1

Query: 88  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDR-VVLISGKEDPEAPLSP 147
           ++I    K+G +IG+ G  IK + + + + I V D      D  V+ ++  E P+   S 
Sbjct: 320 KVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSM 379

Query: 148 AMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASI 207
           A++AV+ + +++    E+ED+ K     ++LLV+S     +IGK GS+I  I++ T A I
Sbjct: 380 AVEAVLLLQEKIN--DEDEDKVK-----MQLLVSSKVIGCIIGKSGSIISEIRKRTKADI 439

Query: 208 RVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLR-KFLVDRSVLPLFEKSFNIP 267
            +  G+  P  A  ++ +VE+ GE   V  AL  +V  LR   L DR        S N P
Sbjct: 440 HISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRET-----GSRNQP 499

Query: 268 PSQDRQMDAWADKSSL--LTSSQSVISAEYPSSTKRESLYLDREAYLDSYIPSS-GISLY 327
           P++    + ++  SS   L   QS +S+  P     +           S +PSS GI  Y
Sbjct: 500 PARSENNNFFSSSSSNTGLALPQSFMSS-VPQVASVDFNRRPETGSSMSMLPSSGGIYGY 559

Query: 328 GQERVLPTIRSSGVGRSG---GPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAI 387
           G   V  T   S    S    G +    T  ++IP +    ++G GG N+  IRR SGA+
Sbjct: 560 GSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAM 619

Query: 388 LTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ 412
           + I +S+         I GTS Q + A+ L Q
Sbjct: 620 IEISDSKNSHGGRVALISGTSEQKRTAENLFQ 638

BLAST of CmoCh05G007520 vs. NCBI nr
Match: gi|778667604|ref|XP_004149510.2| (PREDICTED: RNA-binding KH domain-containing protein PEPPER [Cucumis sativus])

HSP 1 Score: 725.3 bits (1871), Expect = 7.0e-206
Identity = 393/460 (85.43%), Postives = 412/460 (89.57%), Query Frame = 1

Query: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60
           MATNT T+NGSTDA     NP SS L S+AAAEPDS EAG  +SD DPSNQDY S P SD
Sbjct: 1   MATNTTTENGSTDAIP---NPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSD 60

Query: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
           SA H+ S NHT  SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV
Sbjct: 61  SAAHEPS-NHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180
           LDGAVGTPDRVVLISGKE+ E+PLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVA 180

Query: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEA 240
           STQAINLIGKQGSLIKSIQESTGAS+RVLSGDEMPFYAGADERMVELQGESLKVLKALE 
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEG 240

Query: 241 VVGHLRKFLVDRSVLPLFEKSFNIPPSQDRQMDAWADKSSLLTSSQSVISAEYPSSTKRE 300
           VVGHLRKFLVD SVLPLFEKSFN P SQDRQ + WADKSSLLT+SQS+ISAEY  STKRE
Sbjct: 241 VVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRE 300

Query: 301 SLYLDREAYLDSYIPSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360
           SL+LDREA+ DS+I SSGISLYGQ+RVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED
Sbjct: 301 SLFLDREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360

Query: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEP 420
           IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKEP
Sbjct: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEP 420

Query: 421 VTSSSYGRLDTSGMRSSYSQLDAAVPSGSELIDLQIRTHS 461
           VTSSSYGRLDT+G+RSSYSQL A   SGS      + + S
Sbjct: 421 VTSSSYGRLDTTGLRSSYSQLAA---SGSSFTSSSLSSQS 453

BLAST of CmoCh05G007520 vs. NCBI nr
Match: gi|659069666|ref|XP_008451191.1| (PREDICTED: poly(rC)-binding protein 3 [Cucumis melo])

HSP 1 Score: 711.4 bits (1835), Expect = 1.0e-201
Identity = 388/460 (84.35%), Postives = 410/460 (89.13%), Query Frame = 1

Query: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60
           MATNT TDNGSTDA A   NP+SS L S+AAAE DS E G  +SD+DPSNQDY S P SD
Sbjct: 1   MATNTTTDNGSTDAIA---NPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSD 60

Query: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
           SA H+ S +HT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV
Sbjct: 61  SAAHEPS-SHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180
           LDGAVGTPDRVVLISGKE+ ++PLSPAMDAVIRVFKRV   SENEDEAK SF SIRLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVA 180

Query: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEA 240
           STQAINLIGKQGSLIKSIQESTGAS+RVLSGDEMPFYAGADERMVELQGESLKVLKALE 
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEG 240

Query: 241 VVGHLRKFLVDRSVLPLFEKSFNIPPSQDRQMDAWADKSSLLTSSQSVISAEYPSSTKRE 300
           VVGHLRKFLVD SVLPLFEKSFN P SQDRQ + WADKSSLLT+SQS+ISAEYP STKRE
Sbjct: 241 VVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRE 300

Query: 301 SLYLDREAYLDSYIPSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360
           SL+LDRE +LDS+I SSGISLYGQ+RVLPTIRSSGVGRSGG    QVTQTMQIPLSYAED
Sbjct: 301 SLFLDRETHLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGS--CQVTQTMQIPLSYAED 360

Query: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEP 420
           IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKEP
Sbjct: 361 IIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEP 420

Query: 421 VTSSSYGRLDTSGMRSSYSQLDAAVPSGSELIDLQIRTHS 461
           VTSSSYGRLDT+G+RSSYSQL A   SGS      + + S
Sbjct: 421 VTSSSYGRLDTTGLRSSYSQLAA---SGSSYTSSSLSSQS 451

BLAST of CmoCh05G007520 vs. NCBI nr
Match: gi|703156789|ref|XP_010111553.1| (Poly(rC)-binding protein 3 [Morus notabilis])

HSP 1 Score: 552.4 bits (1422), Expect = 8.1e-154
Identity = 308/457 (67.40%), Postives = 359/457 (78.56%), Query Frame = 1

Query: 1   MATNTATDNGSTDANALNFNP---ESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAP 60
           MATN  T NG T A   +  P   +++  AS A  +    E G A  +    N +   AP
Sbjct: 1   MATNEPTANGVTKAPKSDSQPIPSDATAAASTANEKAPVTEPGHATGN---RNMESEPAP 60

Query: 61  ASDSADHDESPNHTDAS---DKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEET 120
             +S +   S   T A+   DKKW GWPGDCVFRLIVPV+KVGSIIGRKG+LIKKMCEET
Sbjct: 61  PGESGEAPASNAGTTATTDADKKWLGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEET 120

Query: 121 RARIRVLDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCS 180
           RARIRVLDGAVGTPDR+VLISGKE+PEA LSPAMDAVIRVFKRV   SENE  A  +FCS
Sbjct: 121 RARIRVLDGAVGTPDRIVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENE-AAGVAFCS 180

Query: 181 IRLLVASTQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKV 240
           IRLLVASTQAINLIGKQGSLIKSIQESTGAS+RVL+GDE+PFYA ADER+VELQGE LKV
Sbjct: 181 IRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLTGDEVPFYAAADERIVELQGEGLKV 240

Query: 241 LKALEAVVGHLRKFLVDRSVLPLFEKSFNIPPSQDRQMDAWADKSSLLTSSQSVISAEYP 300
           LKALEAV+GHLRKFLVD SV+PLFEKS+N   SQ+RQ+D WADKS L  S+Q+ +   YP
Sbjct: 241 LKALEAVIGHLRKFLVDHSVIPLFEKSYNSTISQERQVDTWADKSMLQASTQTGVGTNYP 300

Query: 301 SSTKRESLYLDREAYLDSYIPSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQIP 360
            + KRE  +L+RE  L+  +PSSGIS+YGQ+  LP IR +G GR+G PIVTQ+ QTMQIP
Sbjct: 301 ITAKREPYFLERETQLEPQLPSSGISMYGQDTSLPGIRPTGFGRAGAPIVTQIAQTMQIP 360

Query: 361 LSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV 420
           LSYAEDIIG+ G+NIA+IRR SGAILT+QESRGLPDEITVEIKGTSSQVQ+AQQLIQE +
Sbjct: 361 LSYAEDIIGIEGSNIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQLAQQLIQEVI 420

Query: 421 SAPKEPVTSSSYGRLDTSGMRSSYSQLDAAVPSGSEL 452
           +  KEPV  SSYGR+DT+ +RS+YSQL ++ P  + L
Sbjct: 421 NNHKEPV-PSSYGRIDTA-LRSNYSQLSSSYPPTTSL 451

BLAST of CmoCh05G007520 vs. NCBI nr
Match: gi|470120836|ref|XP_004296493.1| (PREDICTED: poly(rC)-binding protein 3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 551.6 bits (1420), Expect = 1.4e-153
Identity = 304/458 (66.38%), Postives = 357/458 (77.95%), Query Frame = 1

Query: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60
           MAT   ++NGS      +  PES+       ++P S E          +NQD  SAP SD
Sbjct: 1   MATTQPSENGSAKVTEPDPQPESAAATPAPDSDPLSTEI--------QNNQDSESAPKSD 60

Query: 61  SADH--DESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARI 120
           S       S +   A+DK+WPGWPGDCVFRLIVPV+KVGSIIGRKG+LIKKMCEETRARI
Sbjct: 61  SEAPATTSSSDAVSAADKRWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARI 120

Query: 121 RVLDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTS------F 180
           RVLDGA GT DR+VLISG+E+PEAPLSPAMDAVIRVFKRV   SEN  +A+ S      F
Sbjct: 121 RVLDGAAGTTDRIVLISGREEPEAPLSPAMDAVIRVFKRVSGLSENAGDAELSGAAGVAF 180

Query: 181 CSIRLLVASTQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESL 240
           CSIR+LVASTQAINLIGKQGSLIKSIQEST AS+RVLSG+E+PFYA ADER++E+QGE+L
Sbjct: 181 CSIRMLVASTQAINLIGKQGSLIKSIQESTAASVRVLSGEEVPFYAAADERIIEMQGETL 240

Query: 241 KVLKALEAVVGHLRKFLVDRSVLPLFEKSFNIPPSQDRQMDAWADKSSLLTSSQSVISAE 300
           KVL+ALEAVV HLRKFLVD SVLPLFEK++  P SQ+RQ D WADKS L T++Q+V    
Sbjct: 241 KVLRALEAVVSHLRKFLVDHSVLPLFEKTYTAPISQERQPDPWADKSLLHTATQTVGGTS 300

Query: 301 YPSSTKRESLYLDREAYLDSYIPSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQ 360
           YP +  RESL+L RE  L+S +PSSG+S+YGQE  L ++RSSG+GR G PIVTQ+TQTMQ
Sbjct: 301 YPLTATRESLFLGRETQLESQLPSSGLSIYGQEAALSSLRSSGLGRPGAPIVTQITQTMQ 360

Query: 361 IPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQE 420
           IPLSYAEDIIGV G +I FIRR+SGA+LT+QESRGLPDEITVEIKGTSSQVQ AQQLIQE
Sbjct: 361 IPLSYAEDIIGVEGRSIEFIRRSSGALLTVQESRGLPDEITVEIKGTSSQVQAAQQLIQE 420

Query: 421 AVSAPKEPVTSSSYGRLDTSGMRSSYSQLDA-AVPSGS 450
            ++   +    SSYGR+DT G+RSSYSQLD+ + PS S
Sbjct: 421 VIATSNKDQIPSSYGRMDT-GLRSSYSQLDSTSYPSSS 449

BLAST of CmoCh05G007520 vs. NCBI nr
Match: gi|645234577|ref|XP_008223873.1| (PREDICTED: poly(rC)-binding protein 3 [Prunus mume])

HSP 1 Score: 541.6 bits (1394), Expect = 1.4e-150
Identity = 315/491 (64.15%), Postives = 368/491 (74.95%), Query Frame = 1

Query: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSME-AGGAESDLDPSNQDYLSA--- 60
           MAT   T+NGS      +    +S   + +   P+S + A  A +D +P+      +   
Sbjct: 1   MATAQPTENGSAKVTEPDPQQPTSETTTASITVPESDQTATTATADNNPNQNPEPDSGPQ 60

Query: 61  --PASDSADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEET 120
             P++  A    S + T  +DK+WPGWPGDCVFRLIVPV+KVGSIIGRKG+LIKKMCEET
Sbjct: 61  PEPSAQEATTTVSGDATSIADKRWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEET 120

Query: 121 RARIRVLDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTS--- 180
           RARIRVLDGAVGTPDR+VLISG+E+PEAPLSPAMDAVIR+FKR+   +++E +AK S   
Sbjct: 121 RARIRVLDGAVGTPDRIVLISGREEPEAPLSPAMDAVIRIFKRISGLADSEGDAKVSGPA 180

Query: 181 ---FCSIRLLVASTQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQ 240
              FCSIRLLVASTQAINLIGKQGSLIKSIQESTGAS+RVLSGDE+PFYA ADER+VELQ
Sbjct: 181 GVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQ 240

Query: 241 GESLKVLKALEAVVGHLRKFLVDRSVLPLFEKSFNIPPSQDRQMDAWADKSSLLTSSQSV 300
           GE+LKVLKA+EAVV HLRKFLVD SVLPLFEK++N   SQ+RQ D WADKS L T+SQ+ 
Sbjct: 241 GEALKVLKAVEAVVAHLRKFLVDHSVLPLFEKTYNATISQERQPDTWADKSLLHTASQTG 300

Query: 301 ISAEYPSSTKRESLYLDREA-YLDSYIPSSGISLYG------------------------ 360
           +S  Y  S KRESL+LDRE    +S +PS+GISLYG                        
Sbjct: 301 VSTNYSLSAKRESLFLDRETQL-ESQLPSAGISLYGKDPSIYGKDPSIYGKDPSIYGQDS 360

Query: 361 ----QERVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAI 420
               Q+  L +IRSSG+GR G PIVTQ+ QTMQIPLSYAEDIIGV G+NIAFIRR+SGAI
Sbjct: 361 SIYGQDPSLSSIRSSGIGRPGAPIVTQIAQTMQIPLSYAEDIIGVEGSNIAFIRRSSGAI 420

Query: 421 LTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVTSSSYGRLDTSGMRSSYS 450
           LT+QESRGLPDEITVEIKGTSSQVQMAQQLIQE ++  KEP+T SSYGRLDT GMRSSYS
Sbjct: 421 LTVQESRGLPDEITVEIKGTSSQVQMAQQLIQEVINNRKEPIT-SSYGRLDT-GMRSSYS 480

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PEP_ARATH2.4e-12160.94RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana GN=PEP P... [more]
FLK_ARATH7.5e-7542.31Flowering locus K homology domain OS=Arabidopsis thaliana GN=FLK PE=1 SV=1[more]
PCBP3_HUMAN2.2e-1827.98Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2[more]
PCBP3_MOUSE2.2e-1827.98Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=1 SV=3[more]
Y4837_ARATH2.4e-1727.52KH domain-containing protein At4g18375 OS=Arabidopsis thaliana GN=At4g18375 PE=2... [more]
Match NameE-valueIdentityDescription
A0A0A0LMH4_CUCSA4.9e-20685.43Uncharacterized protein OS=Cucumis sativus GN=Csa_2G061550 PE=4 SV=1[more]
W9SIR6_9ROSA5.6e-15467.40Poly(RC)-binding protein 3 OS=Morus notabilis GN=L484_005636 PE=4 SV=1[more]
M5XYS8_PRUPE1.7e-15064.15Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004405mg PE=4 SV=1[more]
F6GXK2_VITVI3.8e-15067.18Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00030 PE=4 SV=... [more]
A0A067F3I5_CITSI2.6e-14364.02Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012307mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G26000.11.3e-12260.94 RNA-binding KH domain-containing protein[more]
AT3G04610.14.2e-7642.31 RNA-binding KH domain-containing protein[more]
AT1G51580.12.2e-2427.39 RNA-binding KH domain-containing protein[more]
AT5G15270.22.1e-2235.06 RNA-binding KH domain-containing protein[more]
AT5G46190.11.0e-2130.12 RNA-binding KH domain-containing protein[more]
Match NameE-valueIdentityDescription
gi|778667604|ref|XP_004149510.2|7.0e-20685.43PREDICTED: RNA-binding KH domain-containing protein PEPPER [Cucumis sativus][more]
gi|659069666|ref|XP_008451191.1|1.0e-20184.35PREDICTED: poly(rC)-binding protein 3 [Cucumis melo][more]
gi|703156789|ref|XP_010111553.1|8.1e-15467.40Poly(rC)-binding protein 3 [Morus notabilis][more]
gi|470120836|ref|XP_004296493.1|1.4e-15366.38PREDICTED: poly(rC)-binding protein 3 [Fragaria vesca subsp. vesca][more]
gi|645234577|ref|XP_008223873.1|1.4e-15064.15PREDICTED: poly(rC)-binding protein 3 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR004088KH_dom_type_1
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010467 gene expression
biological_process GO:0048581 negative regulation of post-embryonic development
biological_process GO:0006396 RNA processing
biological_process GO:0048577 negative regulation of short-day photoperiodism, flowering
biological_process GO:0048579 negative regulation of long-day photoperiodism, flowering
biological_process GO:0009299 mRNA transcription
biological_process GO:0048467 gynoecium development
biological_process GO:0008150 biological_process
biological_process GO:0048367 shoot system development
biological_process GO:0016070 RNA metabolic process
biological_process GO:2000028 regulation of photoperiodism, flowering
biological_process GO:0048585 negative regulation of response to stimulus
biological_process GO:2000242 negative regulation of reproductive process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G007520.1CmoCh05G007520.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 345..415
score: 6.9E-11coord: 83..156
score: 1.5E-9coord: 171..246
score: 2.8
IPR004088K Homology domain, type 1GENE3DG3DSA:3.30.1370.10coord: 172..247
score: 2.8E-17coord: 345..415
score: 3.6E-14coord: 74..139
score: 1.5
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 87..139
score: 6.9E-10coord: 175..241
score: 2.4E-10coord: 348..412
score: 8.4
IPR004088K Homology domain, type 1PROFILEPS50084KH_TYPE_1coord: 84..151
score: 13.879coord: 172..241
score: 13.963coord: 346..410
score: 14
IPR004088K Homology domain, type 1unknownSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 77..139
score: 6.43E-13coord: 342..415
score: 2.63E-13coord: 168..254
score: 7.01
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 69..441
score: 2.5E-207coord: 32..51
score: 2.5E
NoneNo IPR availablePANTHERPTHR10288:SF132ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40-RELATEDcoord: 32..51
score: 2.5E-207coord: 69..441
score: 2.5E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh05G007520CmoCh12G009180Cucurbita moschata (Rifu)cmocmoB149