Cp4.1LG07g06910 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g06910
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionconserved peptide upstream open reading frame 10
LocationCp4.1LG07 : 5810890 .. 5813107 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACTGCTTCCAGAAGACGGAAACCTTAGGGGCGCCTTCCTCTTTTTCTCTATAAATAGCCTCTCTAGATTCCCTCCCTTTCTCACAACAACCAAATCCTCCATTCCCTCTGCATCTTCCGTTATTATCTCTCCCAATTTTCTTGTGGTGTTCAATCCTCTTTCTTTGTTCGGAAAATTTTGGAGGAATTCTTGGTTTCTCCCTATATTTATTCCGCCATTGACGAAGATTTTACAAGTAGCTGAGGTTAGGGCTCTTTGTTGCTTGTGGTGTTTGATTTCCATTTTTTTTTTTTTTCGTTTCTTTTCTTCTTGGAAAGGTATTTCTGAGCTTCTTTGAGATTTTTGATCTGTACTGCGTCGTGGAGTTTCTGATTTGTGGATTTGGTTGTTTTGATCTCTGTTTTTCTGTTTTGGTTGCAGAGAAGAAGCGTTAATGTTGTGATGGAGGCGAAACGCGGTACGAAGAAGTCTAGCAGTGGTAGTAGCAATAGTAGTAAAAGGCAACAATACGAAGCTCCTCTTGGTTACATTATTGAAGACGTTCGTCCACACGGTGGTATTGAGAAGTTCCGATCTGCTGCGTATTCCAACGTAAGATTGTTCTTCGATTTCTTCGAGTTCTTGAGTAGTTTTGTGAGTTTTTGCGTTGTAATTGTGTTTTTCTTGTTGATTTTCTGGCAGTGCGTGAGGAAACCATCCTGATACCTTTTGTCTCTGTAGATTACGAGTTCTGATTTCGATTTTTGCTTTTTCTGTTGTAATTGGGGCTAATTTCTTGTGCATTCTGAGATCCAAAACCTTCCGAATTTCTTTCGCTTGCTTTCGTTGATTTTTCCTGTAATTTAGAGAGGCTTTGATTTTCTCTCCAACCATGACTGTGTTCACCAAACTCCTAGAGGCATCTGCGCCTCCGGAACGATCTCCTTCTCCAATCGGTTTCGAAGGCTTCGAAAAACGCCTGGAAATCACATTCTCTGAACTGCCTATTTTCAAGGACTCTGAAGGACTTGGTCTCCGAGCTTTGACTCGATCTCAACTCGATTCAATCCTTGAACCTGCATTCTGCACTATCGTATCTCATCTCTCTAACTCCGATTTCGATTCTTACGTCCTCTCCGAATCGAGTCTCTTCATTTATCCACATACGATCATCCTCAAAACTTGCGGCACCACCAAGCTTCTCCTCTCCATTCCGATGATTCTCGAACTTGCCGATTCGATCAAACTCTCCGCTGTCGCCGTGAAATACTCCCGCGGAACCTTCATCTTCCCCAACAATCAACCTGCTCCTCACCGTAGCTTCTCCGAGGAAGTTACCGCACTTAATGTCTACTTTGGCGATTTCTACTCCGAGGCGTACGTGATCGGCGATCCGGCTGTTCCGAATCGCAACTGGCACATCTACTCAGCCGTAAAATCACCTACGACCGTGAATCGTACGGATATGGTTACTCTGGAAATGTGTATGACGGGTTTGAACAGAGAAAAGGCCGCGGTGTTTTTCAAAAAATCTGGAGGCAACTCATCGGCGGAGAAAATGACGAAAATGTCCGGAATCTCTGAGATAATTCCGAATCACACCATCTGCGATTTTGAATTTGATCCGTGTGGATACTCCATGAACGGGATCGAAGGTGCAGCGTACTCTACGGTGCACGTGACTCCAGAGGATGGTTTCAGTTACGCCAGCTACGAGGCGATGGGCTTCGACGTGGCGGAGCTTCCTTTCTCGCATCTGGTAAGTAGGACGCTCCGGTGCTTTTCTCCGGCGGAATTCTCGATCGCCATCACGTCGAGCAGCGGCGGCGGCGGCTCCCGCACGTGGTCTGTTGACGATGCGGACGTGGAGGGGTACACGTGTGATAACATGGTGAAGCAGGAGCTGCCAGGTGGCGAGTGGCTAGTTTACCGTACGTACACGGTGGATAGAAGAAGGTGCGCCGCGCTCCCACCGTGCAAGTCGCTGCTGCTGCTGCAGTGCTGGAAGGAGGCCGCCGCCGCCGCCGATGTGGGTGAGGAAGAGGCTGTGCTTCGCCGTGTGTTGTCGGCCTAGTTTAGTGTCGATGTGTCGTCTATGGTGCTTTTGGAGCAGTTATGATTTTATTTTACGGTAATGATTGTTATAATGTAGATTTAGTTTTGAATTTGGGGCAGTTCTGTTTAAATATATACCGAATTAATTGTCCACTTTCATATTTTCTTTTTTTATTTGT

mRNA sequence

ATGCCACTGCTTCCAGAAGACGGAAACCTTAGGGGCGCCTTCCTCTTTTTCTCTATAAATAGCCTCTCTAGATTCCCTCCCTTTCTCACAACAACCAAATCCTCCATTCCCTCTGCATCTTCCGTTATTATCTCTCCCAATTTTCTTGTGGTGTTCAATCCTCTTTCTTTGTTCGGAAAATTTTGGAGGAATTCTTGGTTTCTCCCTATATTTATTCCGCCATTGACGAAGATTTTACAAGTAGCTGAGAGAAGAAGCGTTAATGTTGTGATGGAGGCGAAACGCGGTACGAAGAAGTCTAGCAGTGGTAGTAGCAATAGTAGTAAAAGGCAACAATACGAAGCTCCTCTTGGTTACATTATTGAAGACGTTCGTCCACACGGTGGTATTGAGAAGTTCCGATCTGCTGCGTATTCCAACTGCGTGAGGAAACCATCCTGATACCTTTTGTCTCTGTAGATTACGAGTTCTGATTTCGATTTTTGCTTTTTCTGTTGTAATTGGGGCTAATTTCTTGTGCATTCTGAGATCCAAAACCTTCCGAATTTCTTTCGCTTGCTTTCGTTGATTTTTCCTGTAATTTAGAGAGGCTTTGATTTTCTCTCCAACCATGACTGTGTTCACCAAACTCCTAGAGGCATCTGCGCCTCCGGAACGATCTCCTTCTCCAATCGGTTTCGAAGGCTTCGAAAAACGCCTGGAAATCACATTCTCTGAACTGCCTATTTTCAAGGACTCTGAAGGACTTGGTCTCCGAGCTTTGACTCGATCTCAACTCGATTCAATCCTTGAACCTGCATTCTGCACTATCGTATCTCATCTCTCTAACTCCGATTTCGATTCTTACGTCCTCTCCGAATCGAGTCTCTTCATTTATCCACATACGATCATCCTCAAAACTTGCGGCACCACCAAGCTTCTCCTCTCCATTCCGATGATTCTCGAACTTGCCGATTCGATCAAACTCTCCGCTGTCGCCGTGAAATACTCCCGCGGAACCTTCATCTTCCCCAACAATCAACCTGCTCCTCACCGTAGCTTCTCCGAGGAAGTTACCGCACTTAATGTCTACTTTGGCGATTTCTACTCCGAGGCGTACGTGATCGGCGATCCGGCTGTTCCGAATCGCAACTGGCACATCTACTCAGCCGTAAAATCACCTACGACCGTGAATCGTACGGATATGGTTACTCTGGAAATGTGTATGACGGGTTTGAACAGAGAAAAGGCCGCGGTGTTTTTCAAAAAATCTGGAGGCAACTCATCGGCGGAGAAAATGACGAAAATGTCCGGAATCTCTGAGATAATTCCGAATCACACCATCTGCGATTTTGAATTTGATCCGTGTGGATACTCCATGAACGGGATCGAAGGTGCAGCGTACTCTACGGTGCACGTGACTCCAGAGGATGGTTTCAGTTACGCCAGCTACGAGGCGATGGGCTTCGACGTGGCGGAGCTTCCTTTCTCGCATCTGGTAAGTAGGACGCTCCGGTGCTTTTCTCCGGCGGAATTCTCGATCGCCATCACGTCGAGCAGCGGCGGCGGCGGCTCCCGCACGTGGTCTGTTGACGATGCGGACGTGGAGGGGTACACGTGTGATAACATGGTGAAGCAGGAGCTGCCAGGTGGCGAGTGGCTAGTTTACCGTACGTACACGGTGGATAGAAGAAGGTGCGCCGCGCTCCCACCGTGCAAGTCGCTGCTGCTGCTGCAGTGCTGGAAGGAGGCCGCCGCCGCCGCCGATGTGGGTGAGGAAGAGGCTGTGCTTCGCCGTGTGTTGTCGGCCTAGTTTAGTGTCGATGTGTCGTCTATGGTGCTTTTGGAGCAGTTATGATTTTATTTTACGGTAATGATTGTTATAATGTAGATTTAGTTTTGAATTTGGGGCAGTTCTGTTTAAATATATACCGAATTAATTGTCCACTTTCATATTTTCTTTTTTTATTTGT

Coding sequence (CDS)

ATGCCACTGCTTCCAGAAGACGGAAACCTTAGGGGCGCCTTCCTCTTTTTCTCTATAAATAGCCTCTCTAGATTCCCTCCCTTTCTCACAACAACCAAATCCTCCATTCCCTCTGCATCTTCCGTTATTATCTCTCCCAATTTTCTTGTGGTGTTCAATCCTCTTTCTTTGTTCGGAAAATTTTGGAGGAATTCTTGGTTTCTCCCTATATTTATTCCGCCATTGACGAAGATTTTACAAGTAGCTGAGAGAAGAAGCGTTAATGTTGTGATGGAGGCGAAACGCGGTACGAAGAAGTCTAGCAGTGGTAGTAGCAATAGTAGTAAAAGGCAACAATACGAAGCTCCTCTTGGTTACATTATTGAAGACGTTCGTCCACACGGTGGTATTGAGAAGTTCCGATCTGCTGCGTATTCCAACTGCGTGAGGAAACCATCCTGA

Protein sequence

MPLLPEDGNLRGAFLFFSINSLSRFPPFLTTTKSSIPSASSVIISPNFLVVFNPLSLFGKFWRNSWFLPIFIPPLTKILQVAERRSVNVVMEAKRGTKKSSSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Homology
[Close]
BLAST of Cp4.1LG07g06910 vs. TrEMBL
Match: A0A0A0LM83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G036690 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.7e-18
Identity = 51/57 (89.47%), Postives = 51/57 (89.47%), Query Frame = 1 

Query: 91  MEAKRGTKKS-SSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 147
           ME K G KKS SS SS SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Sbjct: 1   METKGGKKKSNSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 57

[Close]
BLAST of Cp4.1LG07g06910 vs. TrEMBL
Match: A5BJ64_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017166 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-15
Identity = 48/62 (77.42%), Postives = 51/62 (82.26%), Query Frame = 1 

Query: 85  RSVNVVMEAKRGTKKSSSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRK 144
           +SV+VVME K G KKSSS SS      QYE PLGYIIEDVRP+GGIEKFRSAAYSNCVRK
Sbjct: 492 QSVDVVMETKGGKKKSSSSSS-----LQYEVPLGYIIEDVRPNGGIEKFRSAAYSNCVRK 548

Query: 145 PS 147
           PS
Sbjct: 552 PS 548

[Close]
BLAST of Cp4.1LG07g06910 vs. TrEMBL
Match: A0A0A0LAP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G271350 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.0e-14
Identity = 46/59 (77.97%), Postives = 50/59 (84.75%), Query Frame = 1 

Query: 88  NVVMEAKRGTKKSSSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 147
           N +ME+K G KKSSS  S+SSK   YEAPLGY IEDVRPHGGI+KFRSAAYSNCVRKPS
Sbjct: 36  NDLMESKGGKKKSSS--SSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS 92

[Close]
BLAST of Cp4.1LG07g06910 vs. TrEMBL
Match: M0T197_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.0e-13
Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = 1 

Query: 91  MEAKRGTKKSSSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 147
           ME+K G KKSSS SS+     QYEAPLGY IED+RPHGGIEKF+SAAYSNCVRKPS
Sbjct: 1   MESKGGKKKSSSSSSSL----QYEAPLGYSIEDIRPHGGIEKFQSAAYSNCVRKPS 52

[Close]
BLAST of Cp4.1LG07g06910 vs. TrEMBL
Match: F6HYM9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00940 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-13
Identity = 44/56 (78.57%), Postives = 45/56 (80.36%), Query Frame = 1 

Query: 91  MEAKRGTKKSSSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 147
           ME K G KKSSS SS      QYE PLGYIIEDVRP+GGIEKFRSAAYSNCVRKPS
Sbjct: 1   METKGGKKKSSSSSS-----LQYEVPLGYIIEDVRPNGGIEKFRSAAYSNCVRKPS 51

[Close]
BLAST of Cp4.1LG07g06910 vs. TAIR10
Match: AT5G15948.1 (AT5G15948.1 conserved peptide upstream open reading frame 10)

HSP 1 Score: 71.2 bits (173), Expect = 5.8e-13
Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 1 

Query: 91  MEAKRGTKKSSSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 147
           ME+K G KKSSS SS       YEAPLGY IEDVRP GGI+KF+S+ YSNC ++PS
Sbjct: 1   MESKAGNKKSSSNSSLC-----YEAPLGYSIEDVRPFGGIKKFKSSVYSNCAKRPS 51

[Close]
BLAST of Cp4.1LG07g06910 vs. TAIR10
Match: AT3G02468.1 (AT3G02468.1 conserved peptide upstream open reading frame 9)

HSP 1 Score: 70.5 bits (171), Expect = 9.9e-13
Identity = 36/57 (63.16%), Postives = 44/57 (77.19%), Query Frame = 1 

Query: 90  VMEAKRGTKKSSSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 147
           +ME+K G KKSSS SS       YEAPLGY IEDVRP+GGI+KF+S+ YSNC ++PS
Sbjct: 1   MMESKGGKKKSSSSSSLF-----YEAPLGYSIEDVRPNGGIKKFKSSVYSNCSKRPS 52

[Close]
BLAST of Cp4.1LG07g06910 vs. TAIR10
Match: AT3G25572.1 (AT3G25572.1 conserved peptide upstream open reading frame 11)

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-11
Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = 1 

Query: 91  MEAKRGTKKSSSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 147
           ME K G KKSS+ SS  S    +EAPL Y IEDVRP+GGI+KFRSAAYSN   KPS
Sbjct: 1   METKGGKKKSSNSSSRDSLF--FEAPLRYSIEDVRPNGGIKKFRSAAYSNITGKPS 54

[Close]
BLAST of Cp4.1LG07g06910 vs. NCBI nr
Match: gi|659069927|ref|XP_008452459.1| (PREDICTED: S-adenosylmethionine decarboxylase proenzyme-like [Cucumis melo])

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-18
Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 1 

Query: 91  MEAKRGTKKSSSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 147
           ME K G KKS+S SS SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Sbjct: 1   METKGGKKKSNSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 56

[Close]
BLAST of Cp4.1LG07g06910 vs. NCBI nr
Match: gi|700205952|gb|KGN61071.1| (hypothetical protein Csa_2G036690 [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-17
Identity = 51/57 (89.47%), Postives = 51/57 (89.47%), Query Frame = 1 

Query: 91  MEAKRGTKKS-SSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 147
           ME K G KKS SS SS SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Sbjct: 1   METKGGKKKSNSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 57

[Close]
BLAST of Cp4.1LG07g06910 vs. NCBI nr
Match: gi|697128606|ref|XP_009618362.1| (PREDICTED: uncharacterized protein LOC104110545, partial [Nicotiana tomentosiformis])

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-16
Identity = 47/64 (73.44%), Postives = 56/64 (87.50%), Query Frame = 1 

Query: 83  ERRSVNVVMEAKRGTKKSSSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCV 142
           +R+ ++VVME K G KK+SS S+N++   QYEAPLGYIIEDVRP+GGIEKFRSAAYSNCV
Sbjct: 61  KRKKIDVVMETKGG-KKNSSSSNNNNSHIQYEAPLGYIIEDVRPNGGIEKFRSAAYSNCV 120

Query: 143 RKPS 147
           RKPS
Sbjct: 121 RKPS 123

[Close]
BLAST of Cp4.1LG07g06910 vs. NCBI nr
Match: gi|297743708|emb|CBI36591.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15
Identity = 48/64 (75.00%), Postives = 53/64 (82.81%), Query Frame = 1 

Query: 83  ERRSVNVVMEAKRGTKKSSSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCV 142
           +++SV+VVME K G KKSSS SS      QYE PLGYIIEDVRP+GGIEKFRSAAYSNCV
Sbjct: 77  KKQSVDVVMETKGGKKKSSSSSS-----LQYEVPLGYIIEDVRPNGGIEKFRSAAYSNCV 135

Query: 143 RKPS 147
           RKPS
Sbjct: 137 RKPS 135

[Close]
BLAST of Cp4.1LG07g06910 vs. NCBI nr
Match: gi|147774305|emb|CAN76947.1| (hypothetical protein VITISV_017166 [Vitis vinifera])

HSP 1 Score: 90.5 bits (223), Expect = 2.6e-15
Identity = 48/62 (77.42%), Postives = 51/62 (82.26%), Query Frame = 1 

Query: 85  RSVNVVMEAKRGTKKSSSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRK 144
           +SV+VVME K G KKSSS SS      QYE PLGYIIEDVRP+GGIEKFRSAAYSNCVRK
Sbjct: 492 QSVDVVMETKGGKKKSSSSSS-----LQYEVPLGYIIEDVRPNGGIEKFRSAAYSNCVRK 548

Query: 145 PS 147
           PS
Sbjct: 552 PS 548

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g06910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG07g06910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LM83_CUCSA8.7e-1889.47Uncharacterized protein OS=Cucumis sativus GN=Csa_2G036690 PE=4 SV=1[more]
A5BJ64_VITVI1.8e-1577.42Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017166 PE=4 SV=1[more]
A0A0A0LAP2_CUCSA2.0e-1477.97Uncharacterized protein OS=Cucumis sativus GN=Csa_3G271350 PE=4 SV=1[more]
M0T197_MUSAM1.0e-1376.79Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
F6HYM9_VITVI2.2e-1378.57Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00940 PE=4 SV=... [more]
BLAST of Cp4.1LG07g06910 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G15948.15.8e-1364.29 conserved peptide upstream open reading frame 10[more]
AT3G02468.19.9e-1363.16 conserved peptide upstream open reading frame 9[more]
AT3G25572.11.4e-1166.07 conserved peptide upstream open reading frame 11[more]
BLAST of Cp4.1LG07g06910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069927|ref|XP_008452459.1|1.1e-1889.29PREDICTED: S-adenosylmethionine decarboxylase proenzyme-like [Cucumis melo][more]
gi|700205952|gb|KGN61071.1|1.3e-1789.47hypothetical protein Csa_2G036690 [Cucumis sativus][more]
gi|697128606|ref|XP_009618362.1|1.4e-1673.44PREDICTED: uncharacterized protein LOC104110545, partial [Nicotiana tomentosifor... [more]
gi|297743708|emb|CBI36591.3|1.2e-1575.00unnamed protein product [Vitis vinifera][more]
gi|147774305|emb|CAN76947.1|2.6e-1577.42hypothetical protein VITISV_017166 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012511AdoMetDC_leader
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0097164 ammonium ion metabolic process
biological_process GO:0006596 polyamine biosynthetic process
biological_process GO:0015074 DNA integration
biological_process GO:0008150 biological_process
biological_process GO:0006525 arginine metabolic process
biological_process GO:0006560 proline metabolic process
biological_process GO:0006557 S-adenosylmethioninamine biosynthetic process
biological_process GO:0008295 spermidine biosynthetic process
biological_process GO:0006597 spermine biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009536 plastid
molecular_function GO:0003674 molecular_function
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004014 adenosylmethionine decarboxylase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g06910.1Cp4.1LG07g06910.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012511S-adenosyl-l-methionine decarboxylase leader peptidePFAMPF08132AdoMetDC_leadercoord: 91..146
score: 1.3
NoneNo IPR availablePANTHERPTHR35727FAMILY NOT NAMEDcoord: 91..146
score: 7.9
NoneNo IPR availablePANTHERPTHR35727:SF1CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 10-RELATEDcoord: 91..146
score: 7.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG07g06910CmaCh12G008360Cucurbita maxima (Rimu)cmacpeB203
Cp4.1LG07g06910CmoCh12G008410Cucurbita moschata (Rifu)cmocpeB175
Cp4.1LG07g06910Csa2G036690Cucumber (Chinese Long) v2cpecuB823
Cp4.1LG07g06910CSPI02G05400Wild cucumber (PI 183967)cpecpiB824
Cp4.1LG07g06910Lsi11G007050Bottle gourd (USVL1VR-Ls)cpelsiB661
Cp4.1LG07g06910CsaV3_2G007760Cucumber (Chinese Long) v3cpecucB1017
Cp4.1LG07g06910Bhi06G001199Wax gourdcpewgoB1007
Cp4.1LG07g06910Carg11956Silver-seed gourdcarcpeB0806
Cp4.1LG07g06910Carg16415Silver-seed gourdcarcpeB1263
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG07g06910Cp4.1LG11g08230Cucurbita pepo (Zucchini)cpecpeB143
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG07g06910Cucumber (Gy14) v2cgybcpeB274
Cp4.1LG07g06910Melon (DHL92) v3.6.1cpemedB909
Cp4.1LG07g06910Cucumber (Gy14) v1cgycpeB0178
Cp4.1LG07g06910Cucurbita maxima (Rimu)cmacpeB795
Cp4.1LG07g06910Cucurbita moschata (Rifu)cmocpeB748
Cp4.1LG07g06910Melon (DHL92) v3.5.1cpemeB752
Cp4.1LG07g06910Melon (DHL92) v3.5.1cpemeB773