CmaCh12G008360 (gene) Cucurbita maxima (Rimu)

BLAST of CmaCh12G008360 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 4.5e-160
Identity = 417/1336 (31.21%), Postives = 663/1336 (49.63%), Query Frame = 1

Query: 79   WYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFASTSRARAMQIRMELSTIQ 138
            W   D+   S I   ++++V++ ++   TAR  W  LE  + S +    + ++ +L  + 
Sbjct: 52   WADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALH 111

Query: 139  KKDMT-IADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYT 198
              + T    +      L   LA +G +IE+E+    +L  L   YD L T+I        
Sbjct: 112  MSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIE 171

Query: 199  VSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGANGGR-GSRGRSRQLNSGHGQS 258
            + DV + +L  E    +     Q        R   R   N GR G+RG+S+  +    ++
Sbjct: 172  LKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRN 231

Query: 259  RRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQAALATSGYT 318
                N PG       +      +  G+ N D      + +       N ++  +  SG  
Sbjct: 232  CYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPE 291

Query: 319  SDTNWYVDTGATDHITNDLERLTTRERYTGTD--QIQVANGAGLSISHIGNSLIS---GS 378
            S+  W VDT A+ H T   +      RY   D   +++ N +   I+ IG+  I    G 
Sbjct: 292  SE--WVVDTAASHHATPVRDLFC---RYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGC 351

Query: 379  SLVLKHILYAPKINKHLISVQRLASDNNAVVEFHPNYFLVKNRVTKKLLL--HGRCKNGL 438
            +LVLK + + P +  +LIS   +A D +    +  N    K R+TK  L+   G  +  L
Sbjct: 352  TLVLKDVRHVPDLRMNLIS--GIALDRDGYESYFANQ---KWRLTKGSLVIAKGVARGTL 411

Query: 439  YVLPHNFSQALLTA---KLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNAC 498
            Y       Q  L A   ++S + WH+R+GH  S   ++IL   +L       +   C+ C
Sbjct: 412  YRTNAEICQGELNAAQDEISVDLWHKRMGH-MSEKGLQILAKKSLISYAKGTTVKPCDYC 471

Query: 499  QLGKAHQLPFGSSQHVSTAPLQLIHTDVWGP-SIASVNNSKYYVSFVDDFSRYVWIYFLR 558
              GK H++ F +S       L L+++DV GP  I S+  +KY+V+F+DD SR +W+Y L+
Sbjct: 472  LFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILK 531

Query: 559  CKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEY--HRLHNYFKSTGIEHHISCPHTHQ 618
             K  V  VF +F   VE     K++ ++SD GGEY       Y  S GI H  + P T Q
Sbjct: 532  TKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQ 591

Query: 619  QNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFG 678
             NG+ ER +R IVE   ++L  A +P S+W EA  TAC+LINR PS  +  + P      
Sbjct: 592  HNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTN 651

Query: 679  KSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISR 738
            K   YS L+VFGC  + ++      KL  ++  CIF+GY                     
Sbjct: 652  KEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGY--------------------G 711

Query: 739  DVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLASFYTENAL---TDIEPVVSNSHMN 798
            D  F   ++                PV    +      + E+ +    D+   V N  + 
Sbjct: 712  DEEFGYRLWD---------------PVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIP 771

Query: 799  DGQTDNIASDNLSGVSLSSADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQH 858
            +  T    S+N +    ++ + +   E+  E   +   ++   +  EH    PT+   QH
Sbjct: 772  NFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEH----PTQGEEQH 831

Query: 859  -PMRTRLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHP-- 918
             P+R   R  +                SR++ S   +   +I    EP +L+E + HP  
Sbjct: 832  QPLRRSERPRV---------------ESRRYPSTEYV---LISDDREPESLKEVLSHPEK 891

Query: 919  -RWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGF 978
             +   AM +E+ +L++N T+ LV    G   +  KWV+K+K+  D  + R KARLV KGF
Sbjct: 892  NQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGF 951

Query: 979  KQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPG 1038
            +Q+ G+D+ + FSPV+K ++IR ILSLA +    + Q+D++ AFLHG L+EE+YM QP G
Sbjct: 952  EQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEG 1011

Query: 1039 FQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREIT- 1098
            F+ + K K+ +CKL K+LYGLKQAP+ W+ +    +    +  + +D  ++  +  E   
Sbjct: 1012 FEVAGK-KHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNF 1071

Query: 1099 IYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGDLEYFLGIEV--KKTRDGIILSQ 1158
            I +L+YVDD++IV        +L   L   F +KDLG  +  LG+++  ++T   + LSQ
Sbjct: 1072 IILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQ 1131

Query: 1159 RRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEE-----QFKYRSTVGALQY- 1218
             +Y   +L+R NM+  KP+STP+    KL ++   P + EE     +  Y S VG+L Y 
Sbjct: 1132 EKYIERVLERFNMKNAKPVSTPLAGHLKLSKKM-CPTTVEEKGNMAKVPYSSAVGSLMYA 1191

Query: 1219 LTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKSTMMLSGFSDA 1278
            +  TRPD+A AV  V ++L  P   HW AVK ILRY++GT    +    S  +L G++DA
Sbjct: 1192 MVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDA 1251

Query: 1279 DWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLL 1338
            D AG  D+R+S++G+        ISW S+ Q  V+ S+TEAEY A      EMIW+K  L
Sbjct: 1252 DMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFL 1311

Query: 1339 KELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVARKAMEVRFISSS 1384
            +ELG++Q K   ++CD+  A  L+ N ++HARTKHI+V +H++RE V  ++++V  IS++
Sbjct: 1312 QELGLHQ-KEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTN 1316

BLAST of CmaCh12G008360 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 341.7 bits (875), Expect = 4.0e-92
Identity = 189/494 (38.26%), Postives = 286/494 (57.89%), Query Frame = 1

Query: 899  WRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQ 958
            W  A+N EL+A K N TW +       N++DS+WV+ VK    G+  R KARLVA+GF Q
Sbjct: 906  WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965

Query: 959  RFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQ 1018
            ++ +DY +TF+PV + S+ R ILSL +     + Q+D++ AFL+G LKEE+YMR P G  
Sbjct: 966  KYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGIS 1025

Query: 1019 DSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREI--TI 1078
             ++   + +CKL KA+YGLKQA + W       L E  F  S  D  ++IL    I   I
Sbjct: 1026 CNS---DNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI 1085

Query: 1079 YMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGDLEYFLGIEVKKTRDGIILSQRRY 1138
            Y+L+YVDD++I +          + L   F + DL ++++F+GI ++   D I LSQ  Y
Sbjct: 1086 YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAY 1145

Query: 1139 ALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFK--YRSTVGALQYLTM-TRP 1198
               +L + NME C  +STP+ S  K+  E    L+++E      RS +G L Y+ + TRP
Sbjct: 1146 VKKILSKFNMENCNAVSTPLPS--KINYEL---LNSDEDCNTPCRSLIGCLMYIMLCTRP 1205

Query: 1199 DLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKSTMM---LSGFSDADWA 1258
            DL  AVN + +Y        W  +KR+LRY+KGT+ + +  +K+      + G+ D+DWA
Sbjct: 1206 DLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWA 1265

Query: 1259 GCPDDRRSTSGFAV-FLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKE 1318
            G   DR+ST+G+       NLI W++++Q +V+ SSTEAEY A+     E +W+K LL  
Sbjct: 1266 GSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTS 1325

Query: 1319 LGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVARKAMEVRFISSSDQ 1378
            + +      +++ DN G   + +NP  H R KHI++ +HF REQV    + + +I + +Q
Sbjct: 1326 INIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQ 1385

Query: 1379 VADILTKPLSKTPF 1384
            +ADI TKPL    F
Sbjct: 1386 LADIFTKPLPAARF 1391

BLAST of CmaCh12G008360 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.0e-55
Identity = 111/228 (48.68%), Postives = 152/228 (66.67%), Query Frame = 1

Query: 1076 IYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGDLEYFLGIEVKKTRDGIILSQRR 1135
            +Y+L+YVDDI++  SS+     LI +L   F++KDLG + YFLGI++K    G+ LSQ +
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 1136 YALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDL 1195
            YA  +L    M  CKPMSTP+                 +   +RS VGALQYLT+TRPD+
Sbjct: 61   YAEQILNNAGMLDCKPMSTPLPLK---LNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDI 120

Query: 1196 AFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKSTMM-LSGFSDADWAGCPD 1255
            ++AVN VCQ +H PT A +  +KR+LRYVKGT+  G+ I K++ + +  F D+DWAGC  
Sbjct: 121  SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTS 180

Query: 1256 DRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIW 1303
             RRST+GF  FLG N+ISWS+++Q TVSRSSTE EY+A+A   AE+ W
Sbjct: 181  TRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of CmaCh12G008360 vs. Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 2.4e-36
Identity = 93/311 (29.90%), Postives = 168/311 (54.02%), Query Frame = 1

Query: 994  VDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLI 1053
            +D+  AFL+  + E +Y++QPPGF +   P +Y+ +L   +YGLKQAP  W+  +   L 
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNP-DYVWELYGGMYGLKQAPLLWNEHINNTLK 60

Query: 1054 ELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGD 1113
            ++GF     +  L+     +  IY+ +YVDD+++ + S +  +R+ Q+L   +++KDLG 
Sbjct: 61   KIGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGK 120

Query: 1114 LEYFLGIEVKKTRDG-IILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSA 1173
            ++ FLG+ + ++ +G I LS + Y         +   K   TP+ +++ LF      L  
Sbjct: 121  VDKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHL-- 180

Query: 1174 EEQFKYRSTVGALQYLTMT-RPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALG 1233
            ++   Y+S VG L +   T RPD+++ V+ + ++L  P   H  + +R+LRY+  T ++ 
Sbjct: 181  KDITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMC 240

Query: 1234 VKIQK-STMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRK-QATVSRSSTEAE 1293
            +K +  S + L+ + DA      D   ST G+   L    ++WSS+K +  +   STEAE
Sbjct: 241  LKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAE 300

Query: 1294 YKAIANLTAEM 1301
            Y   +    E+
Sbjct: 301  YITASETVMEI 308

BLAST of CmaCh12G008360 vs. Swiss-Prot
Match: YJ41B_YEAST (Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY4B-J PE=3 SV=3)

HSP 1 Score: 142.5 bits (358), Expect = 3.6e-32
Identity = 162/639 (25.35%), Postives = 286/639 (44.76%), Query Frame = 1

Query: 786  NIASDNLSGVSLSSADNTRSS-------EEIAEYEAESSSINAQNQTHEHVSDQPTEAAS 845
            N+ +DN + VS     N  +S        + A    E SS+N + +   H  D+     S
Sbjct: 1181 NVPTDNGTNVSPRLEQNIEASGSPVQTVNKSAFLNKEFSSLNMKRKRKRH--DKNNSLTS 1240

Query: 846  QHPMRTRLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPII------ETATEPRNLQE 905
                R + R+   + K   D             +  T++ P I      E  ++  +L+E
Sbjct: 1241 YELERDKKRSKKNRVKLIPD-------------NMETVSAPKIRAIYYNEAISKNPDLKE 1300

Query: 906  AMQHPRWRGAMNDELSALKRNATWDLVPPK-----PGINLIDSKWVYKVKRKADGSVERL 965
              ++ +   A + EL  LK    +D+         P   ++ +  ++  KR         
Sbjct: 1301 KHEYKQ---AYHKELQNLKDMKVFDVDVKYSRSEIPDNLIVPTNTIFTKKRNGI-----Y 1360

Query: 966  KARLVAKGFKQRFGVDYTDTFSPVIKPST----IRVILSLAVTKGWNMRQVDIQNAFLHG 1025
            KAR+V +G  Q       DT+S +   S     I++ L +A  +   M+ +DI +AFL+ 
Sbjct: 1361 KARIVCRGDTQS-----PDTYSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYA 1420

Query: 1026 ILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVAD 1085
             L+EE+Y+  P         +  + KL KALYGLKQ+PK W+  L   L  +G K +   
Sbjct: 1421 KLEEEIYIPHP-------HDRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYT 1480

Query: 1086 SSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGDL------EYF 1145
              L+  +++ + I   +YVDD +I +S++Q  +  I KLK +F +K  G L         
Sbjct: 1481 PGLYQTEDKNLMI--AVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDI 1540

Query: 1146 LGIEV--KKTRDGIILSQRRYALDLLKRVNME--KCKPMSTPMGSAEKLFREQGIPLSAE 1205
            LG+++   K    I L+ + +   + K+ N E  K +  S P  S  K+  ++ +   +E
Sbjct: 1541 LGMDLVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSE 1600

Query: 1206 EQF-----KYRSTVGALQYLT-MTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGT 1265
            E+F     K +  +G L Y+    R D+ FAV KV + ++ P +  +  + +I++Y+   
Sbjct: 1601 EEFRQGVLKLQQLLGELNYVRHKCRYDIEFAVKKVARLVNYPHERVFYMIYKIIQYLVRY 1660

Query: 1266 LALGVKIQKST---MMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRS 1325
              +G+   +       +   +DA   G   D +S  G  ++ G N+ +  S K      S
Sbjct: 1661 KDIGIHYDRDCNKDKKVIAITDAS-VGSEYDAQSRIGVILWYGMNIFNVYSNKSTNRCVS 1720

Query: 1326 STEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIE 1384
            STEAE  AI    A+   +K  LKELG   +    +  D+  A    +      + K   
Sbjct: 1721 STEAELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQQPKEKFTW 1780

BLAST of CmaCh12G008360 vs. TrEMBL
Match: Q75LJ1_ORYSJ (Putative copia-like retrotransposon protein OS=Oryza sativa subsp. japonica GN=OSJNBa0096I06.16 PE=4 SV=1)

HSP 1 Score: 1268.1 bits (3280), Expect = 0.0e+00
Identity = 672/1418 (47.39%), Postives = 928/1418 (65.44%), Query Frame = 1

Query: 9    SSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNR 68
            ++P     +S KLT+ NY LWS Q+L  +R   L G + G+  APS  I    S++T  +
Sbjct: 11   TNPLFGVQVSEKLTKGNYALWSAQVLAAIRGARLDGHITGATAAPSMEIEKTASDKTTEK 70

Query: 69   KIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFASTSRARAM 128
              I+NP +  W+  DQ VL  + S+++ ++L+ +   +TA +AW  +   F + ++AR++
Sbjct: 71   --IVNPAYQEWFASDQQVLGFLLSTLSRDILTQVATASTAAQAWQQVCAMFTAQTKARSL 130

Query: 129  QIRMELSTIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTS 188
             +R+ L+  QK +M+I++Y  K+K L D +A+ GK +++E+L+AY+L GL  D++P+V++
Sbjct: 131  NVRLTLTNTQKGNMSISEYCGKMKALADEIASSGKPLDEEDLVAYVLNGLDDDFEPVVSA 190

Query: 189  ITTRTDVYTVSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGANGGRGSRGRSRQ 248
            I  R +  T+++VY+ +L++E R        Q  ++ N   +     A       G +  
Sbjct: 191  IVARNESTTMAEVYSQLLNFENRQ----ALRQAHASANAAVVVFSVVAAAAVAHVGAAIL 250

Query: 249  LNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQA 308
            L    G +   +              G+              CWHR+D+ Y  +   +++
Sbjct: 251  LLQDVGAALEEIR------------LGV--------------CWHRYDETYVPD---ERS 310

Query: 309  ALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLI 368
            A A + Y  DTNWY+DTGATDHITN+L++L  RE+Y G D+I  A+GAG+ I HIG+S+I
Sbjct: 311  AAAAAAYGIDTNWYLDTGATDHITNELDKLDVREKYKGGDKIHTASGAGMEIKHIGDSVI 370

Query: 369  SGSS--LVLKHILYAPKINKHLISVQRLASDNNAVVEFHPNYFLVKNRVTKKLLLHGRCK 428
               +  L LK+IL+ P+  K+LIS  RLA DN A +E H NYFL+K+R T+  +L GRC+
Sbjct: 371  HTPTRELHLKNILHVPQAKKNLISAHRLAMDNFAFLEVHSNYFLIKDRATRNTILKGRCR 430

Query: 429  NGLYVLPHNFSQALLTAKL-SKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNA 488
              LY LP + ++ +  A   S  +WH RLGHPA PI  R+L  NNL   T     SIC+A
Sbjct: 431  RRLYSLPTSPAKQVHAATTPSFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDA 490

Query: 489  CQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLR 548
            CQ GK+HQLP+  S  VS+ PL+LI ++VWGP+  SV   K+YVSF+DD+S++ W+Y L+
Sbjct: 491  CQKGKSHQLPYPKSSSVSSQPLELIFSNVWGPAPISVGGKKFYVSFIDDYSKFTWVYLLK 550

Query: 549  CKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQN 608
             KS+V   F +FQ  VE     KI +VQ+DWGGEY +L+ +F   GI HH+SCP+ HQQN
Sbjct: 551  HKSEVFQKFQEFQTLVERFFGHKILAVQTDWGGEYQKLNTFFAKIGISHHVSCPYAHQQN 610

Query: 609  GLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKS 668
            G  ERKHRH++E  L LLA A+MP+ +WDEA   A +LINR PS+ I    PL +LF + 
Sbjct: 611  GSAERKHRHLIEVALTLLAHASMPIKFWDEAVLAAAYLINRTPSKVINFACPLEQLFKEK 670

Query: 669  PDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDV 728
            P+Y+ LR+FGCA WPNLRPYN  KL+FR+ RC+FLGYS+ HKG+KCL  +TGR+Y+SRDV
Sbjct: 671  PNYTALRIFGCAVWPNLRPYNKHKLAFRSKRCVFLGYSNLHKGFKCLEIATGRVYVSRDV 730

Query: 729  VFDENIFPFEE-----SKPPNKTTNPHHPVLLPALAKLASFYTENALTDIEPVVSNSHMN 788
             FDE+IFPF E             +   P L+P L+ L      N + +  P V      
Sbjct: 731  TFDESIFPFSELHSNAGARLRAEISLLPPSLVPHLSSLGG-EQNNHVLNYPPNV------ 790

Query: 789  DGQTDNIASDNLS-GVSLSSADNTRSSEEIAEYEAESSSINAQNQTH--------EHVS- 848
               TD    +N   G  + +     ++    E  A +++  AQ+  H        EH S 
Sbjct: 791  ---TDQFGEENAEIGEEIVANGEENAAAAADENAAAAANGGAQDDVHGVAYDASPEHSSP 850

Query: 849  ---DQPTEAASQHPMRTRLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPII------ 908
               D    AA QH    +   ++VQA   T      S TS   AS+  +   +       
Sbjct: 851  VTDDAMASAAEQHGNPIQ-EEHLVQASPQT-----ASSTSPSVASSAGVHDDVTTDQSDQ 910

Query: 909  ------ETATEP--------------RNLQEAMQHPRWRGAMNDELSALKRNATWDLVPP 968
                  E A  P              ++L+EA+ +  W+ AM+ E  AL  N TW LVPP
Sbjct: 911  TDQAMPEAAVAPIRPKTRLQSGIRKEKSLEEAVNNKHWKEAMDAEYMALIENKTWHLVPP 970

Query: 969  KPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVIL 1028
            + G N+ID KWVYKVKRKADGS++R KARLVAKGFKQR+G+DY DTFSPV+K +TIR++L
Sbjct: 971  QKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVL 1030

Query: 1029 SLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAP 1088
            SLAV++GW++RQ+D++NAFLHG+L+EEVYM+QPPG++  + P NY+CKL KALYGLKQAP
Sbjct: 1031 SLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMP-NYVCKLDKALYGLKQAP 1090

Query: 1089 KAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQK 1148
            +AW+SRL+ KL ELGF  S AD+SLF  K  +++I++LIYVDDII+ SS   AT  L+Q+
Sbjct: 1091 RAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIVASSVPDATSTLLQE 1150

Query: 1149 LKIDFAVKDLGDLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEK 1208
            L  DFA+KDLGDL YFLGIEV K +DG++LSQ +YA DLL+RV M +CKP+STP+ ++EK
Sbjct: 1151 LSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEK 1210

Query: 1209 LFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRIL 1268
            L   +G  L  ++  +YRS VGALQYLT+TRPD++F++NKVCQ+LH PT  HW AVKRIL
Sbjct: 1211 LSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKRIL 1270

Query: 1269 RYVKGTLALGVKI-QKSTMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQAT 1328
            RYVK T+  G+K  +  ++++SGFSDADWAG PDDRRST GFAVFLG NL+SWS+RKQAT
Sbjct: 1271 RYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQAT 1330

Query: 1329 VSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHART 1379
            VSRSS EAEYKA+AN TAE++W+++LL+ELGV   +A +LWCDNLGA YL++NP+FHART
Sbjct: 1331 VSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPIFHART 1376

BLAST of CmaCh12G008360 vs. TrEMBL
Match: Q2QRW4_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. japonica GN=LOC_Os12g26180 PE=4 SV=1)

HSP 1 Score: 1246.9 bits (3225), Expect = 0.0e+00
Identity = 683/1452 (47.04%), Postives = 927/1452 (63.84%), Query Frame = 1

Query: 9    SSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNR 68
            ++P     IS KL + N+ LW  Q+   +R   L G + G+   P   IAV    + G  
Sbjct: 10   TNPFQGHPISEKLGKANHALWKVQVSAAVRGARLQGHLTGATKRPPAEIAVT---KDGAT 69

Query: 69   KIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFASTSRARAM 128
            K   NP    W   DQ VL  + SS+T EVL  +    TA E W  +E+ +++ +RARA+
Sbjct: 70   KKEPNPAHEDWEATDQQVLGYLLSSLTREVLMQVATCDTAAEVWSAIEQMYSTHTRARAI 129

Query: 129  QIRMELSTIQKKDMTIADYFRKVKHLGDTLAAIGKR-IEDEELIAYMLQGLGPDYDPLVT 188
              R  L+  +K +M+  +YF K+K LGD +A  G R I++EELI Y++ GLG  Y  +V+
Sbjct: 130  NTRFALTNTKKGNMSTPEYFAKMKSLGDEMATAGGRPIDEEELIQYIITGLGEGYSEVVS 189

Query: 189  SITTRTDVYTVSDVYAHMLSYEMRH-LRKGTFEQLSSANNVNRISIRGGANGGRGSRGRS 248
            ++  R +  +VSD+Y+ +L++E R  + +G  E   +  N    S  GG     G +G S
Sbjct: 190  AVCARVEPISVSDLYSQVLNFEARQAIYRGAQEVTVNVANRGGFS-HGGRGNSNGGQGGS 249

Query: 249  RQLNSGHGQSRRTVNNPGRQPSKTQSSSGI----VCQICGKPNHDALQCWHRFDQAYQAE 308
            R    G G  R    N G    + ++  G+    +CQ+C K  H A  CW+R+D+ Y  +
Sbjct: 250  RGGGGGGGHGR---GNGGGGHGRGRTPGGVDKRPICQVCFKRGHTAADCWYRYDEDYVPD 309

Query: 309  NNLKQAALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISH 368
                 AA A + Y  DTNWY+DTGATDH+T +L++LT +E+Y G +QI  A+GAG+ ISH
Sbjct: 310  AK-HVAAAAVNSYGVDTNWYIDTGATDHVTGELDKLTMKEKYNGGEQIHTASGAGMDISH 369

Query: 369  IGNSLI---SGSSLVLKHILYAPKINKHLISVQRLASDNNAVVEFHPNYFLVKNRVTKKL 428
            IG++++   +  ++ L+++LY P+  K+L+SV RL +DN+A +E H +YF +K+++T+K 
Sbjct: 370  IGHAIVHNPNSRNIHLRNVLYVPQAKKNLVSVHRLVNDNSAFLELHRDYFFLKDQITRKT 429

Query: 429  LLHGRCKNGLYVLPHN-FSQALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIP 488
            LL GR    LY LPH+   QA    KLS ++WH RLGHP+     +++   +L   +++ 
Sbjct: 430  LLKGRSWRRLYPLPHSSLKQAYSAIKLSLDRWHHRLGHPSITTVKQVVNKFSLPC-SDLS 489

Query: 489  SSSICNACQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRY 548
            S S+CNACQ  K+HQLPF  S  VS  PL+L+ +DVWGP+  SV   KYYVSF+DDFS++
Sbjct: 490  SESVCNACQQAKSHQLPFPISSSVSKHPLELVFSDVWGPAPESVGRKKYYVSFIDDFSKF 549

Query: 549  VWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISC 608
             WIY ++ KS V   F +FQ  VE   + KI ++Q+DWGGEY  L+++F   GI HH+SC
Sbjct: 550  TWIYLIQHKSQVFDKFQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSC 609

Query: 609  PHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPL 668
            PHTHQQNG  ERKHRHIVE GL+LL+ A+MPL +WDEAF  A +LINR+PSR I   +PL
Sbjct: 610  PHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRVIHNISPL 669

Query: 669  HKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGR 728
             KLF + PDYS LR+FGCACWPNLRPYNN KL FR+ RC+FLG+S+ HKG+KCL  STGR
Sbjct: 670  EKLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKCLEVSTGR 729

Query: 729  IYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLASFYTENALTDIEPVVSNSH 788
            IYISRDVVFDENIFPF E           H      L       T   L  I  V +   
Sbjct: 730  IYISRDVVFDENIFPFTEL----------HANAGARLRSEIDILTPELLGPIRSVGNEQC 789

Query: 789  MNDGQTDNIASDNLSGVSLSSADNTRSSEEIAEYEAE--------SSSINAQNQTHEHVS 848
            M+    +N  S ++S    + A+       +   +AE         +S   +     H S
Sbjct: 790  MH--PVNNPLSADVSAALSNRANEPHRDGAVHPADAEDPPATPPLDASSGPEPDRVVHHS 849

Query: 849  DQPTEAASQHPMRT---------------RLRNNIVQAKQFTDGTI----RYSETSRKFA 908
               T ++ +HP  T                  +++ QA Q  +  +      S  +++ A
Sbjct: 850  PAAT-SSGRHPGPTPGSVPRGAASSLAEETAEDSVSQAVQEQESQVVQEQEQSSPAQEHA 909

Query: 909  SAVTITTPIIETATEPRNLQEAMQHPRWR--------------------------GAMND 968
             AVT  T  ++ A       EA   PR R                          G   +
Sbjct: 910  QAVTDETNTLQHADVTDTGSEAPAGPRTRLQSGVRKEKVYTDGTIKYKHSWFTASGEPTN 969

Query: 969  ELSALKRNATWDLVPPKPGINLIDS-----------------KWVYKVKRKADGSVERLK 1028
            +L ALK +  W L        L+ +                 KWVYK+KRKADG+++R K
Sbjct: 970  DLEALK-DKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYK 1029

Query: 1029 ARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEE 1088
            ARLVAKGFKQR+G+DY DTFSPV+K +TIR+ILSLAV+KGW++RQ+D+QNAFLHG L+EE
Sbjct: 1030 ARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEE 1089

Query: 1089 VYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVADSSLFI 1148
            VYM QPPGF+D  KP +++CKL KALYGLKQAP+AW SRL+ KL++LGFK S  D+SLF 
Sbjct: 1090 VYMLQPPGFEDPTKP-HHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFF 1149

Query: 1149 LKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGDLEYFLGIEVKKTRDG 1208
            L   +IT+++L+YVDDII+ SSS++AT  L+Q LK +FA+KDLG+L YFLGIEV K ++G
Sbjct: 1150 LNKGDITMFVLVYVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLGIEVSKVQNG 1209

Query: 1209 IILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYL 1268
            I+L+Q +YA DLLK+V M  CKP +TP+  +EKL   +G  L  E+   YRS VGALQYL
Sbjct: 1210 IVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYL 1269

Query: 1269 TMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSDA 1328
            T+TRPD+AF+VNKVCQ+LH PT  HW AVKRILRY+K    LG++I KS + ++SGFSDA
Sbjct: 1270 TLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDA 1329

Query: 1329 DWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLL 1380
            DWAGC DDRRST GFA+FLG+NL+SW++RKQATVSRSSTE+EYKAIAN TAE++W+++LL
Sbjct: 1330 DWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTLL 1389

BLAST of CmaCh12G008360 vs. TrEMBL
Match: A5BFR8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012106 PE=4 SV=1)

HSP 1 Score: 1057.4 bits (2733), Expect = 1.6e-305
Identity = 589/1434 (41.07%), Postives = 858/1434 (59.83%), Query Frame = 1

Query: 6    NTMSS-PS---ISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEP 65
            +TM+S PS   ++  + VKL + NY+LW +QI   + +     F+DG+   P + ++   
Sbjct: 21   STMASIPSYQMLNHTLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEKDLSPG- 80

Query: 66   SEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS 125
                     ++NP F  W  QD+ +LS I SS+T  +++ ++G  T+  AW  LE  F+S
Sbjct: 81   ---------VMNPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSS 140

Query: 126  TSRARAMQIRMELSTIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPD 185
            +SRAR MQ+R+EL + +K  M++ DY  K+K   D LAAIG+ + +++ +  +L GLG D
Sbjct: 141  SSRARIMQLRLELQSTKKGSMSMIDYIMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSD 200

Query: 186  YDPLVTSITTRTDVYTVSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGA---NG 245
            Y+ +VT+I  R D  ++  +++ +L++E R  ++ + EQ+S AN  +  + RGG    NG
Sbjct: 201  YNAVVTAINIRDDKISLEAIHSMLLAFEHRLEQQSSIEQMS-ANYASSSNNRGGGRKFNG 260

Query: 246  GRGS-----------RGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHD 305
            GRG            RGR R     +GQ  R  ++P  +P          CQ+CGK  H 
Sbjct: 261  GRGQGYSPNNNNYTYRGRGR--GGRNGQGGRQNSSPSEKPQ---------CQLCGKFGHT 320

Query: 306  ALQCWHRFDQAYQA-------------ENNLKQAALATSGYTSDTNWYVDTGATDHITND 365
            A  C+HRFD ++Q              +NN+     + S   +D +WY+D+GA+ H+T +
Sbjct: 321  AQICYHRFDISFQGGQTTISHSLNNGNQNNIPAMVASASNNPADESWYLDSGASHHLTQN 380

Query: 366  LERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGS--SLVLKHILYAPKINKHLISVQ 425
            L  LT+   YTGTD++ + NG  LSIS+IG+  +     S  LK + + P I+ +LISV 
Sbjct: 381  LGNLTSTSPYTGTDKVTIGNGKHLSISNIGSKQLHSHTHSFRLKKVFHVPFISANLISVA 440

Query: 426  RLASDNNAVVEFHPNYFLVKNRVTKKLLLHGRCKNGLYVLP-----------HN----FS 485
            +  S+NNA++EFH N F VK+  TK +L  G+ +NGLY  P           +N     S
Sbjct: 441  KFCSENNALIEFHSNAFFVKDLHTKMVLAQGKLENGLYKFPVFSNLKPYSSINNASAFHS 500

Query: 486  QALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFG 545
            Q   T +   E WH RLGH +  I  +++   N+A  +    S +C+ CQL K+H+LP  
Sbjct: 501  QFSSTVENKAELWHNRLGHASFDIVSKVMNTCNVA--SGKYKSFVCSDCQLAKSHRLPTQ 560

Query: 546  SSQHVSTAPLQLIHTDVWGP-SIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQ 605
             S   ++ PL+L++TD+WGP SI S + ++Y++ FVDD+SRY W Y L+ K     +F  
Sbjct: 561  LSNFHASKPLELVYTDIWGPASIKSTSGARYFILFVDDYSRYTWFYSLQTKDQALPIFKX 620

Query: 606  FQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIV 665
            F+  +E   +TKI+ +QSD GGE+    ++ ++ GI H  SCP+   QNG VERKHRH+V
Sbjct: 621  FKLQMENQFDTKIKCLQSDNGGEFRSFTSFLQAVGIAHRFSCPYNSXQNGRVERKHRHVV 680

Query: 666  ETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGC 725
            ETGLALL+ A++P+ YW  AF T  FLINRMPS+ ++ D+P   LF + PDY   RVFGC
Sbjct: 681  ETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDSPYFTLFRRHPDYKSFRVFGC 740

Query: 726  ACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEE 785
             C+P +RPYN  KL +R+ +C+FLGYS +HKG+ CL+ +TGR+YI+  VVFDE+ FP  +
Sbjct: 741  LCYPFIRPYNTHKLQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTFPLAQ 800

Query: 786  SKPPNKTTNPHHPVLLPALAKLASFYTENALTDIEPVVSNSHMNDGQTDNIASDNLSGVS 845
            SK  + + +       PAL    SF        + P    SH +        S++    +
Sbjct: 801  SKSSSSSNDTSAEGSTPALITPPSF------PCLLPDSKISHASIDSHSLSTSESPIPTT 860

Query: 846  LSSADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQHPMRTRLRNNIVQAKQF 905
             SS  +T SS    +   +S               +P   A    M TR    I + K  
Sbjct: 861  SSSPLDTSSSSPAIDLSPKS-------------VPEPQITALAPRMTTRSMRGITKKKTI 920

Query: 906  TDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATW 965
             D             SA+ +        +EP  L++A + P W  AM  E++AL RN TW
Sbjct: 921  LDL------------SAIKV--------SEPSTLKQAFKDPNWTKAMEMEIAALHRNHTW 980

Query: 966  DLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPST 1025
            DLV   P +N+I  KWVYK+K K DGS+ER KARLVAKG+ Q  G+DY +TFSPV+K +T
Sbjct: 981  DLVEQPPNVNVIGCKWVYKLKHKPDGSIERYKARLVAKGYNQTHGLDYFETFSPVVKAAT 1040

Query: 1026 IRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYG 1085
            IR+IL++A++  W +RQ+D+ NAFL+G L+E+VYM QPPG+ D   P N +C+LKKALYG
Sbjct: 1041 IRIILTVALSFKWEIRQLDVHNAFLNGELEEQVYMSQPPGYFDPQFP-NRVCRLKKALYG 1100

Query: 1086 LKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATE 1145
            LKQAP+AW  RL+  L++ GF  S  DSS+F+   +  T+ +L+YVDDI++  SS     
Sbjct: 1101 LKQAPRAWFQRLSSALLQWGFSMSRTDSSMFLHFGKATTLIVLVYVDDILVTGSSSTQIS 1160

Query: 1146 RLIQKLKIDFAVKDLGDLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPM 1205
             LI KL   FA++DLG L +FLGIEV      + LSQ +Y  DLL R  +   KP +TP 
Sbjct: 1161 SLIAKLDSVFALRDLGQLSFFLGIEVSYNEGSMTLSQTKYISDLLHRTELFDTKPANTPG 1220

Query: 1206 GSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGA 1265
               + L +  G P++  +   YRS VGALQY+T+TRPD+AFAVNK CQ++  PT AHW +
Sbjct: 1221 AVGKNLSKFDGDPMT--DVTHYRSVVGALQYVTLTRPDIAFAVNKACQFMQQPTTAHWLS 1280

Query: 1266 VKRILRYVKGTLALGVKIQ-KSTMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSS 1325
            VKRILRY++GT+  G+     S + + GF+DADW    DDRRS+SG+ V+LG NL+SWSS
Sbjct: 1281 VKRILRYLRGTMQDGLLFSPSSNLTIEGFTDADWGAHLDDRRSSSGYLVYLGGNLVSWSS 1340

Query: 1326 RKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPV 1385
             KQ  VSRSS E+EY+ +   TAE++W+++LL+EL V     P LW DN+ A ++  NPV
Sbjct: 1341 TKQKVVSRSSAESEYRGLVFATAEIVWMQALLQELCVPIPAIPLLWYDNISAYHMAKNPV 1388

Query: 1386 FHARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHLSE 1390
            FHARTKHIE+D HF+R+QV R  ++++F+ + +Q  D+LTK L+ + F +  S+
Sbjct: 1401 FHARTKHIEIDLHFIRDQVMRGKIQLQFVPTEEQPVDLLTKHLTSSRFLSLKSQ 1388

BLAST of CmaCh12G008360 vs. TrEMBL
Match: A5BQ73_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039158 PE=4 SV=1)

HSP 1 Score: 1025.4 bits (2650), Expect = 6.8e-296
Identity = 580/1407 (41.22%), Postives = 835/1407 (59.35%), Query Frame = 1

Query: 17   ISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEF 76
            + VKL + NY+LW +QI   + +     F+DG+   P + +   P E        INP F
Sbjct: 33   LPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSVCPEKEL--RPGE--------INPAF 92

Query: 77   TVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFASTSRARAMQIRMELST 136
                 QD+ +LS I SS+T  +++ ++G  ++  AW  LE+ F+S SRAR MQ+ +E  +
Sbjct: 93   VAXRRQDRTILSWIYSSLTPGIMAQIIGHNSSHSAWNALEKIFSSCSRARIMQLXLEFQS 152

Query: 137  IQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVY 196
             +K  M++ DY  KVK   D+LAAIG+ + +++ I  +L GLG DY+ +VT+I  R D  
Sbjct: 153  TKKGSMSMIDYIMKVKGAADSLAAIGEPVSEQDQIMNLLGGLGSDYNAVVTAINIREDKI 212

Query: 197  TVSDVYAHMLSYEMRHLRKGTFEQLS--SANNVNRISIRGGA---NGGRGSRGRSRQLN- 256
            ++  V++ +L++E R  ++G+ EQL   SAN  +  + RGG    NGGRG        N 
Sbjct: 213  SLEAVHSMLLAFEQRLEQQGSIEQLPAMSANYASXSNNRGGGRKYNGGRGPNFMMTNSNF 272

Query: 257  SGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQA--------- 316
             G G+  R     GRQ S   SS    CQ+CGK  H    C+HRFD  +Q+         
Sbjct: 273  RGRGRGXR-YGQSGRQNSS--SSERPQCQLCGKFGHTVQVCYHRFDITFQSTQNNTTGVS 332

Query: 317  ---ENNLKQAALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGL 376
                +N   A +A S   +D NWY+D+GA+ H+T ++  LT    YTG D++ + NG  L
Sbjct: 333  NSGNSNXMPAMVAXSNNXADDNWYLDSGASHHLTQNVANLTNATPYTGADKVTIGNGKHL 392

Query: 377  SISHIGNSLISGS--SLVLKHILYAPKINKHLISVQRLASDNNAVVEFHPNYFLVKNRVT 436
            +IS+   + +  +  S  LK + + P I+ +LISV +  SDNNA++EFH N F +K+  T
Sbjct: 393  TISNTXFTRLFSNPHSFQLKKVFHVPFISANLISVAKFCSDNNALIEFHSNGFFLKDLHT 452

Query: 437  KKLLLHGRCKNGLYVLP--HNFSQALL-----------TAKLSKEQWHRRLGHPASPITI 496
            K++L  G+ +NGLY  P   N   A +             +  +E WH RLGH A+ I  
Sbjct: 453  KRVLAQGKLENGLYKFPVISNKKTAYVGITNDSTFQCSNIENKRELWHHRLGHAATDIVT 512

Query: 497  RILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGP-SIASV 556
            RI+ + N++       +++C++CQL K+H+LP   S   ++ PL+L++TD+WGP S+ S 
Sbjct: 513  RIMHNCNVSCGKY--KATVCSSCQLAKSHRLPTHLSSFHASKPLELVYTDIWGPASVTST 572

Query: 557  NNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHR 616
            + +KY++ FVDD+SRY W+Y L+ K     +F  F+  VE     KI+ +Q D GGE+  
Sbjct: 573  SGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKXFKLQVENQFEAKIKCLQXDNGGEFRS 632

Query: 617  LHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACF 676
              ++ + +GI H  SCP+   QNG VERKHRH+VETGLALLA A +PL +W  AF TA F
Sbjct: 633  FMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATF 692

Query: 677  LINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGY 736
            LINRMPS+ +   +P   LF ++PDY  LRVFGC C+P +RPYNN KL +R+ +C+FLGY
Sbjct: 693  LINRMPSKVLXNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGY 752

Query: 737  SSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLASFY 796
            S  HKGY CL+  TGR+Y+S  VVFDE  FPF ++   + + +     ++P +       
Sbjct: 753  SLHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQNISSSPSKDASDESIIPXI------- 812

Query: 797  TENALTDIEPVVSNSHMNDGQTDNIASDNLSG-----VSLSSADNTRSSEEIAEYEAESS 856
                +    P   + H   G   ++AS NL+       S +    TR S E    EAE  
Sbjct: 813  ----IVSSNPSTLSFH---GSNHSMASPNLTSTLTHPTSPTDTPTTRXSRE-PVLEAE-V 872

Query: 857  SINAQNQTHEHVSDQPTEAASQHPMRTRLRNNIVQAKQFTDGTIRYSETSRKFASAVTIT 916
             + AQ Q    V   P        + TR  + I + K                     I 
Sbjct: 873  XLPAQQQV---VVPPPR-------VTTRSMSGITKRK--------------------PIF 932

Query: 917  TPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVK 976
                   +EP  L++A++ P W  AM+ E++AL +N TWDLV P   +N+I  KWVYK+K
Sbjct: 933  NLAASKISEPTTLKQAIKDPNWAEAMHTEIAALHKNQTWDLVDPPKDVNIIGCKWVYKLK 992

Query: 977  RKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQ 1036
             K DGSV+R KARLVA+GF Q FG+DY +TFSPV+K +TIR++L++ ++  W +RQ+D  
Sbjct: 993  YKXDGSVDRYKARLVARGFNQTFGLDYFETFSPVVKAATIRIVLTIXLSYRWELRQLD-- 1052

Query: 1037 NAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGF 1096
                       VYM QPPGF     P N +CKLKKALYGLKQ+P+AW ++L+  L+  GF
Sbjct: 1053 -----------VYMAQPPGFLHPNHP-NKVCKLKKALYGLKQSPRAWFTKLSSALLSXGF 1112

Query: 1097 KASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGDLEYF 1156
             +S  DSS+F+   R  T+ +L+YVDDII+  SS    ++LI KL   FA++DLG L YF
Sbjct: 1113 NSSRTDSSMFVHFGRHSTLIVLVYVDDIIVTGSSPILIQQLIHKLHSLFALRDLGQLSYF 1172

Query: 1157 LGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFK 1216
            LGIEV      + LSQR+Y  DLL+R +M   K  +TP      L +  G  +  ++   
Sbjct: 1173 LGIEVTYDGGSLHLSQRKYITDLLQRTSMLDSKAAATPGTVGLSLSQFDGDLM--DDVTM 1232

Query: 1217 YRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS 1276
            YRS VGALQY T+TRPD+AF++NK CQ++H PT  HW +VKRILRY+KGT+  G+ +Q S
Sbjct: 1233 YRSVVGALQYATLTRPDIAFSINKACQFMHRPTSTHWSSVKRILRYLKGTITHGLLLQPS 1292

Query: 1277 T-MMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANL 1336
                +  ++DADW   PDDRRS+SG+ V+LG NL+SW++ KQ  VSRSS E+EY+ +A  
Sbjct: 1293 AHFTIQAYTDADWGAQPDDRRSSSGYLVYLGNNLVSWTASKQKVVSRSSAESEYRGLAIA 1352

Query: 1337 TAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVAR 1384
            TAE+IW ++LL+EL +  +  P L+ DN+ A Y+  NPVFHARTKHIE+D HF+R+QV  
Sbjct: 1353 TAEIIWTQALLRELCISITSIPTLYYDNISAYYMAKNPVFHARTKHIEIDLHFIRDQVLH 1362

BLAST of CmaCh12G008360 vs. TrEMBL
Match: A0A151U9E7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan GN=KK1_020152 PE=4 SV=1)

HSP 1 Score: 1009.2 bits (2608), Expect = 5.0e-291
Identity = 579/1437 (40.29%), Postives = 834/1437 (58.04%), Query Frame = 1

Query: 12   SISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKII 71
            + S  IS KL+++N+L W  Q    +R   L   + G+M  P+Q        +    K +
Sbjct: 15   AFSNPISSKLSEDNFLTWRQQAESTIRGYRLKKHILGAMHVPAQH-----KTDEDKAKGV 74

Query: 72   INPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFASTSRARAMQIR 131
            ++PE+  +  QD L+ S +  S+  +    MVG     + W  LE  FAS ++AR  Q++
Sbjct: 75   LSPEYEDYDQQDNLLKSWLLESMEPQFKVRMVGYEWCHQIWNNLEIYFASQTKARVKQLK 134

Query: 132  MELSTIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITT 191
            ++L  I KK   I  Y  ++K + + LAAIG  +   E I  +  GL  +YDP +TS+ T
Sbjct: 135  IQLRGI-KKTTAINQYLLEIKKIVNNLAAIGSPLNTAEHIDAIFDGLSEEYDPFITSVLT 194

Query: 192  RTDVYTVSDVYAHMLSYEMRHLRKGTFEQL--------SSANNVNRISIRGGANGGRGSR 251
            RT+ Y+V  + + +++ E R  +    E +         S N+  + + +G  +   G+ 
Sbjct: 195  RTEEYSVEQIESLLMAQEERLEKHKASESVPLQANLAQGSFNSRKQFTNQGRGSNNNGTH 254

Query: 252  GRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAEN 311
            GR      G G+S +      +QP          CQ+CGK  H A  CWHR+DQ Y   N
Sbjct: 255  GRGPHRGRGRGRSAQHFGRGNKQP----------CQVCGKIGHIAFHCWHRYDQQYTEPN 314

Query: 312  -----------NLKQAALATSGYTS---DTNWYVDTGATDHITNDLERLTTRERYTGTDQ 371
                       N +Q     +G  +   D  WY D+GAT+H+T+DL  L ++  YTG D+
Sbjct: 315  LNHNTNVYNPGNQQQMQAMIAGSQNMVYDDQWYPDSGATNHLTSDLNNLGSKTDYTGQDK 374

Query: 372  IQVANGAGLSISHIGNSL----ISGSSLVLKHILYAPKINKHLISVQRLASDNNAVVEFH 431
            I + NG  + I+H G S     +S     LK +L+ P I K+L+SV +   DNN  VEFH
Sbjct: 375  IHMGNGQAIGINHTGTSFFHTPMSSKIFTLKELLHVPHITKNLLSVSKFCKDNNVYVEFH 434

Query: 432  PNYFLVKNRVTKKLLLHGRCKNGLYV------------------LPHNFSQALLT-AKLS 491
             NY LVK++ +K+ LL G  KNGLYV                  +P N +   +   + S
Sbjct: 435  TNYCLVKSQDSKETLLRGNLKNGLYVFDEVQILKPDVYEHTVDSVPTNRTTLYVQRTRKS 494

Query: 492  KEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAP 551
             + WH RL H +  I   +++  N+ +  N   S +C +C +GK+H LPF  S  V  +P
Sbjct: 495  YDVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSHTLPFSDSYTVYNSP 554

Query: 552  LQLIHTDVWGPS-IASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETML 611
            L+L+++DVWGPS  AS    +YYV F D FS+Y WIYF+  KS+    F+ F+  VE   
Sbjct: 555  LELVYSDVWGPSHYASREGFRYYVHFTDAFSKYTWIYFMHNKSETAHHFIHFKSMVENQF 614

Query: 612  NTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIVETGLALLAQ 671
              KI+  QSD G E+  L   F   GI H +SCPH+HQQNG  ERKHRHI E GL LL+ 
Sbjct: 615  GHKIKMFQSDGGKEFTCLTKLFNENGITHRLSCPHSHQQNGTAERKHRHITEVGLTLLSS 674

Query: 672  ANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPY 731
            + +P  +W +AF+TA  +INR+P+  +   +P   LF K PDY +LR FGCAC+P+LRP+
Sbjct: 675  SGLPHIFWSDAFSTAIHVINRLPTPILGHKSPYEVLFNKIPDYLLLRPFGCACYPHLRPF 734

Query: 732  NNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKT-- 791
            N+ K+ FR+++C+F+GYS  HKGYKC   + G+I ISR+VVFDE+ FP       N    
Sbjct: 735  NSHKMDFRSSQCVFIGYSMQHKGYKCFT-TNGKIIISRNVVFDEDTFPGPSYFNTNNVAG 794

Query: 792  -TNPHHPVLLPALAKLAS-FYTENALTDIEPVVSNSHMNDGQTDNIASDNLSGVSLSSAD 851
             ++ H P  +P++  L S     N+ T + P+VS+        +++    L+  + +S D
Sbjct: 795  LSSSHSPQPVPSIHVLPSQSLAPNSATTV-PLVSSI------DESLQDSQLTSTTDTSQD 854

Query: 852  NTRSSEEIAEYEAESSSINAQN--QTHEHVSDQPTEAASQHPMRTRLRNNIVQAKQFTDG 911
            N  +S         SS  N Q    T    +   T   +QHPM TR +  + + K F   
Sbjct: 855  NLITS---------SSQPNPQPIITTVPDPASPATRTTNQHPMITRAKIGVFKPKAFL-- 914

Query: 912  TIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLV 971
                                     +EP ++ +A+ +  W+ AM DE +AL +N TWDLV
Sbjct: 915  -----------------------ATSEPISVAQALDNKHWKQAMQDEYNALLKNHTWDLV 974

Query: 972  PPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRV 1031
               PG   I  KW++K K K DGS+ R KARLVA+GF Q+ G+DYTDTFSPV+KP +IR+
Sbjct: 975  SLPPGRTAITCKWIFKNKYKQDGSILRHKARLVARGFSQQQGLDYTDTFSPVVKPVSIRI 1034

Query: 1032 ILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQ 1091
            +L+LAV+KGW + Q+D+ NAFL+G LKE++YM QP GF + A   N +CKL+KALYGLKQ
Sbjct: 1035 VLALAVSKGWPIHQIDVDNAFLNGDLKEDIYMLQPQGFHNGA--PNTVCKLRKALYGLKQ 1094

Query: 1092 APKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLI 1151
            AP+AW  +LT  L++LGFK + +DSSLF   ++  +IY+LIYVDDIII S+S  A + LI
Sbjct: 1095 APRAWFQKLTLILLQLGFKQARSDSSLFTFTSKVTSIYILIYVDDIIITSNSPAAIQTLI 1154

Query: 1152 QKLKIDFAVKDLGDLEYFLGIEVKKT-RDGIILSQRRYALDLLKRVNMEKCKPMSTPMGS 1211
              L   F +KDLG L YFLGIEV      GI LSQ +Y  D+L ++NM   KP+ TPM  
Sbjct: 1155 STLHRFFPLKDLGSLHYFLGIEVNSDGAGGIHLSQTKYLKDILDKLNMSNAKPVKTPMAP 1214

Query: 1212 AEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVK 1271
            + KL  + G  +  +    YRS +GALQYLT+TRPD+A+ VNK+CQ++H P ++HW AVK
Sbjct: 1215 SLKLTND-GTAVCPDPSL-YRSVIGALQYLTITRPDIAYTVNKLCQFMHHPLESHWKAVK 1274

Query: 1272 RILRYVKGTLALGVKIQKST-MMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRK 1331
            R+LRY++GTL  G+  +KST   +  + D+DWA   +D RSTSG  V+LG N++SW ++K
Sbjct: 1275 RLLRYLQGTLQHGLHYKKSTDTGIHAYCDSDWASDHEDMRSTSGNCVYLGPNIVSWMAKK 1334

Query: 1332 QATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFH 1391
            Q  VSRSSTEAE++++A+L  E+ +I++LL EL    ++ P +WCDN GA  L++NPV H
Sbjct: 1335 QRVVSRSSTEAEFRSLASLVTEVQYIQNLLSELHNSSTQPPLIWCDNQGAVLLSANPVLH 1388

Query: 1392 ARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHLSERRSVD 1395
             +TKH E+D  FVRE+VAR  ++V+ I +  QVAD+LTK  S + F   L  + +VD
Sbjct: 1395 TKTKHFELDLWFVRERVARGQIQVKHIPARFQVADLLTKAPSSSIFLA-LRHKLTVD 1388

BLAST of CmaCh12G008360 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 408.3 bits (1048), Expect = 2.0e-113
Identity = 212/482 (43.98%), Postives = 305/482 (63.28%), Query Frame = 1

Query: 881  IETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKA 940
            I  A EP    EA +   W GAM+DE+ A++   TW++    P    I  KWVYK+K  +
Sbjct: 80   IAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS 139

Query: 941  DGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAF 1000
            DG++ER KARLVAKG+ Q+ G+D+ +TFSPV K +++++IL+++    + + Q+DI NAF
Sbjct: 140  DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAF 199

Query: 1001 LHGILKEEVYMRQPPGF---QDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGF 1060
            L+G L EE+YM+ PPG+   Q  + P N +C LKK++YGLKQA + W  + +  LI  GF
Sbjct: 200  LNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGF 259

Query: 1061 KASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGDLEYF 1120
              S +D + F+     + + +L+YVDDIII S++D A + L  +LK  F ++DLG L+YF
Sbjct: 260  VQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYF 319

Query: 1121 LGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFK 1180
            LG+E+ ++  GI + QR+YALDLL    +  CKP S PM  +       G      +   
Sbjct: 320  LGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF--VDAKA 379

Query: 1181 YRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGV-KIQK 1240
            YR  +G L YL +TR D++FAVNK+ Q+   P  AH  AV +IL Y+KGT+  G+    +
Sbjct: 380  YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQ 439

Query: 1241 STMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANL 1300
            + M L  FSDA +  C D RRST+G+ +FLG +LISW S+KQ  VS+SS EAEY+A++  
Sbjct: 440  AEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFA 499

Query: 1301 TAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVAR 1359
            T EM+W+    +EL +  SK   L+CDN  A ++ +N VFH RTKHIE D H VRE+   
Sbjct: 500  TDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVY 559

BLAST of CmaCh12G008360 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 218.8 bits (556), Expect = 2.2e-56
Identity = 111/228 (48.68%), Postives = 152/228 (66.67%), Query Frame = 1

Query: 1076 IYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGDLEYFLGIEVKKTRDGIILSQRR 1135
            +Y+L+YVDDI++  SS+     LI +L   F++KDLG + YFLGI++K    G+ LSQ +
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 1136 YALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDL 1195
            YA  +L    M  CKPMSTP+                 +   +RS VGALQYLT+TRPD+
Sbjct: 61   YAEQILNNAGMLDCKPMSTPLPLK---LNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDI 120

Query: 1196 AFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKSTMM-LSGFSDADWAGCPD 1255
            ++AVN VCQ +H PT A +  +KR+LRYVKGT+  G+ I K++ + +  F D+DWAGC  
Sbjct: 121  SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTS 180

Query: 1256 DRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIW 1303
             RRST+GF  FLG N+ISWS+++Q TVSRSSTE EY+A+A   AE+ W
Sbjct: 181  TRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of CmaCh12G008360 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 111.7 bits (278), Expect = 3.8e-24
Identity = 55/112 (49.11%), Postives = 80/112 (71.43%), Query Frame = 1

Query: 873 AVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKW 932
           ++TITT I +   EP+++  A++ P W  AM +EL AL RN TW LVPP    N++  KW
Sbjct: 17  SLTITTTIKK---EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKW 76

Query: 933 VYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLA 985
           V+K K  +DG+++RLKARLVAKGF Q  G+ + +T+SPV++ +TIR IL++A
Sbjct: 77  VFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

BLAST of CmaCh12G008360 vs. TAIR10
Match: ATMG00240.1 (ATMG00240.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 80.5 bits (197), Expect = 9.5e-15
Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = 1

Query: 1187 YLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQ-KSTMMLSGFS 1246
            YLT+TRPDL FAVN++ Q+      A   AV ++L YVKGT+  G+     S + L  F+
Sbjct: 2    YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 1247 DADWAGCPDDRRSTSGFAV-----FLGA 1269
            D+DWA CPD RRS +GF       FLGA
Sbjct: 62   DSDWASCPDTRRSVTGFCSLVPLWFLGA 89

BLAST of CmaCh12G008360 vs. TAIR10
Match: AT1G34070.1 (AT1G34070.1 Retrotransposon gag protein (InterPro:IPR005162))

HSP 1 Score: 79.7 bits (195), Expect = 1.6e-14
Identity = 66/261 (25.29%), Postives = 108/261 (41.38%), Query Frame = 1

Query: 17  ISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEF 76
           + + + + NY  W    L +  S +++G +DG++                   +  N   
Sbjct: 22  VMLDIEESNYDAWRELFLTHCLSFDVMGHIDGTL-------------------LPTNAND 81

Query: 77  TVWYPQDQLV-LSLINSSVTEEVLSTMVGITTAREAWITLERQFASTSRARAMQIRMELS 136
             W  +D +V LSL  +   ++   + V  +T+R+ W+ ++ QF +   ARA+++  EL 
Sbjct: 82  VNWQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELR 141

Query: 137 TIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDV 196
           T    DM +ADY+RK+K L D+L  +   + D  L+ Y+L GL P +D ++  I  R   
Sbjct: 142 TKDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPF 201

Query: 197 YTVSDVYAHMLSYEMR-------------HLRKGTFEQLSSANNVNRISIRGGANGGRGS 256
            +  D    +   E R             H    T    S A  V      GG   G   
Sbjct: 202 PSFDDAATMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPPVTNFQRSGGNQMGYRG 261

Query: 257 RGRSRQLNSGHGQSRRTVNNP 264
           RGR   +  G G      N P
Sbjct: 262 RGRGNNIFRGRGGRFSYYNMP 263

BLAST of CmaCh12G008360 vs. NCBI nr
Match: gi|40714683|gb|AAR88589.1| (putative copia-like retrotransposon protein [Oryza sativa Japonica Group])

HSP 1 Score: 1268.1 bits (3280), Expect = 0.0e+00
Identity = 672/1418 (47.39%), Postives = 928/1418 (65.44%), Query Frame = 1

Query: 9    SSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNR 68
            ++P     +S KLT+ NY LWS Q+L  +R   L G + G+  APS  I    S++T  +
Sbjct: 11   TNPLFGVQVSEKLTKGNYALWSAQVLAAIRGARLDGHITGATAAPSMEIEKTASDKTTEK 70

Query: 69   KIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFASTSRARAM 128
              I+NP +  W+  DQ VL  + S+++ ++L+ +   +TA +AW  +   F + ++AR++
Sbjct: 71   --IVNPAYQEWFASDQQVLGFLLSTLSRDILTQVATASTAAQAWQQVCAMFTAQTKARSL 130

Query: 129  QIRMELSTIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTS 188
             +R+ L+  QK +M+I++Y  K+K L D +A+ GK +++E+L+AY+L GL  D++P+V++
Sbjct: 131  NVRLTLTNTQKGNMSISEYCGKMKALADEIASSGKPLDEEDLVAYVLNGLDDDFEPVVSA 190

Query: 189  ITTRTDVYTVSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGANGGRGSRGRSRQ 248
            I  R +  T+++VY+ +L++E R        Q  ++ N   +     A       G +  
Sbjct: 191  IVARNESTTMAEVYSQLLNFENRQ----ALRQAHASANAAVVVFSVVAAAAVAHVGAAIL 250

Query: 249  LNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQA 308
            L    G +   +              G+              CWHR+D+ Y  +   +++
Sbjct: 251  LLQDVGAALEEIR------------LGV--------------CWHRYDETYVPD---ERS 310

Query: 309  ALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLI 368
            A A + Y  DTNWY+DTGATDHITN+L++L  RE+Y G D+I  A+GAG+ I HIG+S+I
Sbjct: 311  AAAAAAYGIDTNWYLDTGATDHITNELDKLDVREKYKGGDKIHTASGAGMEIKHIGDSVI 370

Query: 369  SGSS--LVLKHILYAPKINKHLISVQRLASDNNAVVEFHPNYFLVKNRVTKKLLLHGRCK 428
               +  L LK+IL+ P+  K+LIS  RLA DN A +E H NYFL+K+R T+  +L GRC+
Sbjct: 371  HTPTRELHLKNILHVPQAKKNLISAHRLAMDNFAFLEVHSNYFLIKDRATRNTILKGRCR 430

Query: 429  NGLYVLPHNFSQALLTAKL-SKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNA 488
              LY LP + ++ +  A   S  +WH RLGHPA PI  R+L  NNL   T     SIC+A
Sbjct: 431  RRLYSLPTSPAKQVHAATTPSFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDA 490

Query: 489  CQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLR 548
            CQ GK+HQLP+  S  VS+ PL+LI ++VWGP+  SV   K+YVSF+DD+S++ W+Y L+
Sbjct: 491  CQKGKSHQLPYPKSSSVSSQPLELIFSNVWGPAPISVGGKKFYVSFIDDYSKFTWVYLLK 550

Query: 549  CKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQN 608
             KS+V   F +FQ  VE     KI +VQ+DWGGEY +L+ +F   GI HH+SCP+ HQQN
Sbjct: 551  HKSEVFQKFQEFQTLVERFFGHKILAVQTDWGGEYQKLNTFFAKIGISHHVSCPYAHQQN 610

Query: 609  GLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKS 668
            G  ERKHRH++E  L LLA A+MP+ +WDEA   A +LINR PS+ I    PL +LF + 
Sbjct: 611  GSAERKHRHLIEVALTLLAHASMPIKFWDEAVLAAAYLINRTPSKVINFACPLEQLFKEK 670

Query: 669  PDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDV 728
            P+Y+ LR+FGCA WPNLRPYN  KL+FR+ RC+FLGYS+ HKG+KCL  +TGR+Y+SRDV
Sbjct: 671  PNYTALRIFGCAVWPNLRPYNKHKLAFRSKRCVFLGYSNLHKGFKCLEIATGRVYVSRDV 730

Query: 729  VFDENIFPFEE-----SKPPNKTTNPHHPVLLPALAKLASFYTENALTDIEPVVSNSHMN 788
             FDE+IFPF E             +   P L+P L+ L      N + +  P V      
Sbjct: 731  TFDESIFPFSELHSNAGARLRAEISLLPPSLVPHLSSLGG-EQNNHVLNYPPNV------ 790

Query: 789  DGQTDNIASDNLS-GVSLSSADNTRSSEEIAEYEAESSSINAQNQTH--------EHVS- 848
               TD    +N   G  + +     ++    E  A +++  AQ+  H        EH S 
Sbjct: 791  ---TDQFGEENAEIGEEIVANGEENAAAAADENAAAAANGGAQDDVHGVAYDASPEHSSP 850

Query: 849  ---DQPTEAASQHPMRTRLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPII------ 908
               D    AA QH    +   ++VQA   T      S TS   AS+  +   +       
Sbjct: 851  VTDDAMASAAEQHGNPIQ-EEHLVQASPQT-----ASSTSPSVASSAGVHDDVTTDQSDQ 910

Query: 909  ------ETATEP--------------RNLQEAMQHPRWRGAMNDELSALKRNATWDLVPP 968
                  E A  P              ++L+EA+ +  W+ AM+ E  AL  N TW LVPP
Sbjct: 911  TDQAMPEAAVAPIRPKTRLQSGIRKEKSLEEAVNNKHWKEAMDAEYMALIENKTWHLVPP 970

Query: 969  KPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVIL 1028
            + G N+ID KWVYKVKRKADGS++R KARLVAKGFKQR+G+DY DTFSPV+K +TIR++L
Sbjct: 971  QKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVL 1030

Query: 1029 SLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAP 1088
            SLAV++GW++RQ+D++NAFLHG+L+EEVYM+QPPG++  + P NY+CKL KALYGLKQAP
Sbjct: 1031 SLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMP-NYVCKLDKALYGLKQAP 1090

Query: 1089 KAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQK 1148
            +AW+SRL+ KL ELGF  S AD+SLF  K  +++I++LIYVDDII+ SS   AT  L+Q+
Sbjct: 1091 RAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIVASSVPDATSTLLQE 1150

Query: 1149 LKIDFAVKDLGDLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEK 1208
            L  DFA+KDLGDL YFLGIEV K +DG++LSQ +YA DLL+RV M +CKP+STP+ ++EK
Sbjct: 1151 LSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEK 1210

Query: 1209 LFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRIL 1268
            L   +G  L  ++  +YRS VGALQYLT+TRPD++F++NKVCQ+LH PT  HW AVKRIL
Sbjct: 1211 LSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKRIL 1270

Query: 1269 RYVKGTLALGVKI-QKSTMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQAT 1328
            RYVK T+  G+K  +  ++++SGFSDADWAG PDDRRST GFAVFLG NL+SWS+RKQAT
Sbjct: 1271 RYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQAT 1330

Query: 1329 VSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHART 1379
            VSRSS EAEYKA+AN TAE++W+++LL+ELGV   +A +LWCDNLGA YL++NP+FHART
Sbjct: 1331 VSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPIFHART 1376

BLAST of CmaCh12G008360 vs. NCBI nr
Match: gi|77555253|gb|ABA98049.1| (retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group])

HSP 1 Score: 1246.9 bits (3225), Expect = 0.0e+00
Identity = 683/1452 (47.04%), Postives = 927/1452 (63.84%), Query Frame = 1

Query: 9    SSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNR 68
            ++P     IS KL + N+ LW  Q+   +R   L G + G+   P   IAV    + G  
Sbjct: 10   TNPFQGHPISEKLGKANHALWKVQVSAAVRGARLQGHLTGATKRPPAEIAVT---KDGAT 69

Query: 69   KIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFASTSRARAM 128
            K   NP    W   DQ VL  + SS+T EVL  +    TA E W  +E+ +++ +RARA+
Sbjct: 70   KKEPNPAHEDWEATDQQVLGYLLSSLTREVLMQVATCDTAAEVWSAIEQMYSTHTRARAI 129

Query: 129  QIRMELSTIQKKDMTIADYFRKVKHLGDTLAAIGKR-IEDEELIAYMLQGLGPDYDPLVT 188
              R  L+  +K +M+  +YF K+K LGD +A  G R I++EELI Y++ GLG  Y  +V+
Sbjct: 130  NTRFALTNTKKGNMSTPEYFAKMKSLGDEMATAGGRPIDEEELIQYIITGLGEGYSEVVS 189

Query: 189  SITTRTDVYTVSDVYAHMLSYEMRH-LRKGTFEQLSSANNVNRISIRGGANGGRGSRGRS 248
            ++  R +  +VSD+Y+ +L++E R  + +G  E   +  N    S  GG     G +G S
Sbjct: 190  AVCARVEPISVSDLYSQVLNFEARQAIYRGAQEVTVNVANRGGFS-HGGRGNSNGGQGGS 249

Query: 249  RQLNSGHGQSRRTVNNPGRQPSKTQSSSGI----VCQICGKPNHDALQCWHRFDQAYQAE 308
            R    G G  R    N G    + ++  G+    +CQ+C K  H A  CW+R+D+ Y  +
Sbjct: 250  RGGGGGGGHGR---GNGGGGHGRGRTPGGVDKRPICQVCFKRGHTAADCWYRYDEDYVPD 309

Query: 309  NNLKQAALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISH 368
                 AA A + Y  DTNWY+DTGATDH+T +L++LT +E+Y G +QI  A+GAG+ ISH
Sbjct: 310  AK-HVAAAAVNSYGVDTNWYIDTGATDHVTGELDKLTMKEKYNGGEQIHTASGAGMDISH 369

Query: 369  IGNSLI---SGSSLVLKHILYAPKINKHLISVQRLASDNNAVVEFHPNYFLVKNRVTKKL 428
            IG++++   +  ++ L+++LY P+  K+L+SV RL +DN+A +E H +YF +K+++T+K 
Sbjct: 370  IGHAIVHNPNSRNIHLRNVLYVPQAKKNLVSVHRLVNDNSAFLELHRDYFFLKDQITRKT 429

Query: 429  LLHGRCKNGLYVLPHN-FSQALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIP 488
            LL GR    LY LPH+   QA    KLS ++WH RLGHP+     +++   +L   +++ 
Sbjct: 430  LLKGRSWRRLYPLPHSSLKQAYSAIKLSLDRWHHRLGHPSITTVKQVVNKFSLPC-SDLS 489

Query: 489  SSSICNACQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRY 548
            S S+CNACQ  K+HQLPF  S  VS  PL+L+ +DVWGP+  SV   KYYVSF+DDFS++
Sbjct: 490  SESVCNACQQAKSHQLPFPISSSVSKHPLELVFSDVWGPAPESVGRKKYYVSFIDDFSKF 549

Query: 549  VWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISC 608
             WIY ++ KS V   F +FQ  VE   + KI ++Q+DWGGEY  L+++F   GI HH+SC
Sbjct: 550  TWIYLIQHKSQVFDKFQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSC 609

Query: 609  PHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPL 668
            PHTHQQNG  ERKHRHIVE GL+LL+ A+MPL +WDEAF  A +LINR+PSR I   +PL
Sbjct: 610  PHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRVIHNISPL 669

Query: 669  HKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGR 728
             KLF + PDYS LR+FGCACWPNLRPYNN KL FR+ RC+FLG+S+ HKG+KCL  STGR
Sbjct: 670  EKLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKCLEVSTGR 729

Query: 729  IYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLASFYTENALTDIEPVVSNSH 788
            IYISRDVVFDENIFPF E           H      L       T   L  I  V +   
Sbjct: 730  IYISRDVVFDENIFPFTEL----------HANAGARLRSEIDILTPELLGPIRSVGNEQC 789

Query: 789  MNDGQTDNIASDNLSGVSLSSADNTRSSEEIAEYEAE--------SSSINAQNQTHEHVS 848
            M+    +N  S ++S    + A+       +   +AE         +S   +     H S
Sbjct: 790  MH--PVNNPLSADVSAALSNRANEPHRDGAVHPADAEDPPATPPLDASSGPEPDRVVHHS 849

Query: 849  DQPTEAASQHPMRT---------------RLRNNIVQAKQFTDGTI----RYSETSRKFA 908
               T ++ +HP  T                  +++ QA Q  +  +      S  +++ A
Sbjct: 850  PAAT-SSGRHPGPTPGSVPRGAASSLAEETAEDSVSQAVQEQESQVVQEQEQSSPAQEHA 909

Query: 909  SAVTITTPIIETATEPRNLQEAMQHPRWR--------------------------GAMND 968
             AVT  T  ++ A       EA   PR R                          G   +
Sbjct: 910  QAVTDETNTLQHADVTDTGSEAPAGPRTRLQSGVRKEKVYTDGTIKYKHSWFTASGEPTN 969

Query: 969  ELSALKRNATWDLVPPKPGINLIDS-----------------KWVYKVKRKADGSVERLK 1028
            +L ALK +  W L        L+ +                 KWVYK+KRKADG+++R K
Sbjct: 970  DLEALK-DKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYK 1029

Query: 1029 ARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEE 1088
            ARLVAKGFKQR+G+DY DTFSPV+K +TIR+ILSLAV+KGW++RQ+D+QNAFLHG L+EE
Sbjct: 1030 ARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEE 1089

Query: 1089 VYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVADSSLFI 1148
            VYM QPPGF+D  KP +++CKL KALYGLKQAP+AW SRL+ KL++LGFK S  D+SLF 
Sbjct: 1090 VYMLQPPGFEDPTKP-HHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFF 1149

Query: 1149 LKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGDLEYFLGIEVKKTRDG 1208
            L   +IT+++L+YVDDII+ SSS++AT  L+Q LK +FA+KDLG+L YFLGIEV K ++G
Sbjct: 1150 LNKGDITMFVLVYVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLGIEVSKVQNG 1209

Query: 1209 IILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYL 1268
            I+L+Q +YA DLLK+V M  CKP +TP+  +EKL   +G  L  E+   YRS VGALQYL
Sbjct: 1210 IVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYL 1269

Query: 1269 TMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSDA 1328
            T+TRPD+AF+VNKVCQ+LH PT  HW AVKRILRY+K    LG++I KS + ++SGFSDA
Sbjct: 1270 TLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDA 1329

Query: 1329 DWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLL 1380
            DWAGC DDRRST GFA+FLG+NL+SW++RKQATVSRSSTE+EYKAIAN TAE++W+++LL
Sbjct: 1330 DWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTLL 1389

BLAST of CmaCh12G008360 vs. NCBI nr
Match: gi|147790209|emb|CAN61322.1| (hypothetical protein VITISV_012106 [Vitis vinifera])

HSP 1 Score: 1057.4 bits (2733), Expect = 2.3e-305
Identity = 589/1434 (41.07%), Postives = 858/1434 (59.83%), Query Frame = 1

Query: 6    NTMSS-PS---ISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEP 65
            +TM+S PS   ++  + VKL + NY+LW +QI   + +     F+DG+   P + ++   
Sbjct: 21   STMASIPSYQMLNHTLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEKDLSPG- 80

Query: 66   SEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS 125
                     ++NP F  W  QD+ +LS I SS+T  +++ ++G  T+  AW  LE  F+S
Sbjct: 81   ---------VMNPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSS 140

Query: 126  TSRARAMQIRMELSTIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPD 185
            +SRAR MQ+R+EL + +K  M++ DY  K+K   D LAAIG+ + +++ +  +L GLG D
Sbjct: 141  SSRARIMQLRLELQSTKKGSMSMIDYIMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSD 200

Query: 186  YDPLVTSITTRTDVYTVSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGA---NG 245
            Y+ +VT+I  R D  ++  +++ +L++E R  ++ + EQ+S AN  +  + RGG    NG
Sbjct: 201  YNAVVTAINIRDDKISLEAIHSMLLAFEHRLEQQSSIEQMS-ANYASSSNNRGGGRKFNG 260

Query: 246  GRGS-----------RGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHD 305
            GRG            RGR R     +GQ  R  ++P  +P          CQ+CGK  H 
Sbjct: 261  GRGQGYSPNNNNYTYRGRGR--GGRNGQGGRQNSSPSEKPQ---------CQLCGKFGHT 320

Query: 306  ALQCWHRFDQAYQA-------------ENNLKQAALATSGYTSDTNWYVDTGATDHITND 365
            A  C+HRFD ++Q              +NN+     + S   +D +WY+D+GA+ H+T +
Sbjct: 321  AQICYHRFDISFQGGQTTISHSLNNGNQNNIPAMVASASNNPADESWYLDSGASHHLTQN 380

Query: 366  LERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGS--SLVLKHILYAPKINKHLISVQ 425
            L  LT+   YTGTD++ + NG  LSIS+IG+  +     S  LK + + P I+ +LISV 
Sbjct: 381  LGNLTSTSPYTGTDKVTIGNGKHLSISNIGSKQLHSHTHSFRLKKVFHVPFISANLISVA 440

Query: 426  RLASDNNAVVEFHPNYFLVKNRVTKKLLLHGRCKNGLYVLP-----------HN----FS 485
            +  S+NNA++EFH N F VK+  TK +L  G+ +NGLY  P           +N     S
Sbjct: 441  KFCSENNALIEFHSNAFFVKDLHTKMVLAQGKLENGLYKFPVFSNLKPYSSINNASAFHS 500

Query: 486  QALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFG 545
            Q   T +   E WH RLGH +  I  +++   N+A  +    S +C+ CQL K+H+LP  
Sbjct: 501  QFSSTVENKAELWHNRLGHASFDIVSKVMNTCNVA--SGKYKSFVCSDCQLAKSHRLPTQ 560

Query: 546  SSQHVSTAPLQLIHTDVWGP-SIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQ 605
             S   ++ PL+L++TD+WGP SI S + ++Y++ FVDD+SRY W Y L+ K     +F  
Sbjct: 561  LSNFHASKPLELVYTDIWGPASIKSTSGARYFILFVDDYSRYTWFYSLQTKDQALPIFKX 620

Query: 606  FQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIV 665
            F+  +E   +TKI+ +QSD GGE+    ++ ++ GI H  SCP+   QNG VERKHRH+V
Sbjct: 621  FKLQMENQFDTKIKCLQSDNGGEFRSFTSFLQAVGIAHRFSCPYNSXQNGRVERKHRHVV 680

Query: 666  ETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGC 725
            ETGLALL+ A++P+ YW  AF T  FLINRMPS+ ++ D+P   LF + PDY   RVFGC
Sbjct: 681  ETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDSPYFTLFRRHPDYKSFRVFGC 740

Query: 726  ACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEE 785
             C+P +RPYN  KL +R+ +C+FLGYS +HKG+ CL+ +TGR+YI+  VVFDE+ FP  +
Sbjct: 741  LCYPFIRPYNTHKLQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTFPLAQ 800

Query: 786  SKPPNKTTNPHHPVLLPALAKLASFYTENALTDIEPVVSNSHMNDGQTDNIASDNLSGVS 845
            SK  + + +       PAL    SF        + P    SH +        S++    +
Sbjct: 801  SKSSSSSNDTSAEGSTPALITPPSF------PCLLPDSKISHASIDSHSLSTSESPIPTT 860

Query: 846  LSSADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQHPMRTRLRNNIVQAKQF 905
             SS  +T SS    +   +S               +P   A    M TR    I + K  
Sbjct: 861  SSSPLDTSSSSPAIDLSPKS-------------VPEPQITALAPRMTTRSMRGITKKKTI 920

Query: 906  TDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATW 965
             D             SA+ +        +EP  L++A + P W  AM  E++AL RN TW
Sbjct: 921  LDL------------SAIKV--------SEPSTLKQAFKDPNWTKAMEMEIAALHRNHTW 980

Query: 966  DLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPST 1025
            DLV   P +N+I  KWVYK+K K DGS+ER KARLVAKG+ Q  G+DY +TFSPV+K +T
Sbjct: 981  DLVEQPPNVNVIGCKWVYKLKHKPDGSIERYKARLVAKGYNQTHGLDYFETFSPVVKAAT 1040

Query: 1026 IRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYG 1085
            IR+IL++A++  W +RQ+D+ NAFL+G L+E+VYM QPPG+ D   P N +C+LKKALYG
Sbjct: 1041 IRIILTVALSFKWEIRQLDVHNAFLNGELEEQVYMSQPPGYFDPQFP-NRVCRLKKALYG 1100

Query: 1086 LKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATE 1145
            LKQAP+AW  RL+  L++ GF  S  DSS+F+   +  T+ +L+YVDDI++  SS     
Sbjct: 1101 LKQAPRAWFQRLSSALLQWGFSMSRTDSSMFLHFGKATTLIVLVYVDDILVTGSSSTQIS 1160

Query: 1146 RLIQKLKIDFAVKDLGDLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPM 1205
             LI KL   FA++DLG L +FLGIEV      + LSQ +Y  DLL R  +   KP +TP 
Sbjct: 1161 SLIAKLDSVFALRDLGQLSFFLGIEVSYNEGSMTLSQTKYISDLLHRTELFDTKPANTPG 1220

Query: 1206 GSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGA 1265
               + L +  G P++  +   YRS VGALQY+T+TRPD+AFAVNK CQ++  PT AHW +
Sbjct: 1221 AVGKNLSKFDGDPMT--DVTHYRSVVGALQYVTLTRPDIAFAVNKACQFMQQPTTAHWLS 1280

Query: 1266 VKRILRYVKGTLALGVKIQ-KSTMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSS 1325
            VKRILRY++GT+  G+     S + + GF+DADW    DDRRS+SG+ V+LG NL+SWSS
Sbjct: 1281 VKRILRYLRGTMQDGLLFSPSSNLTIEGFTDADWGAHLDDRRSSSGYLVYLGGNLVSWSS 1340

Query: 1326 RKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPV 1385
             KQ  VSRSS E+EY+ +   TAE++W+++LL+EL V     P LW DN+ A ++  NPV
Sbjct: 1341 TKQKVVSRSSAESEYRGLVFATAEIVWMQALLQELCVPIPAIPLLWYDNISAYHMAKNPV 1388

Query: 1386 FHARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHLSE 1390
            FHARTKHIE+D HF+R+QV R  ++++F+ + +Q  D+LTK L+ + F +  S+
Sbjct: 1401 FHARTKHIEIDLHFIRDQVMRGKIQLQFVPTEEQPVDLLTKHLTSSRFLSLKSQ 1388

BLAST of CmaCh12G008360 vs. NCBI nr
Match: gi|147856699|emb|CAN81355.1| (hypothetical protein VITISV_039158 [Vitis vinifera])

HSP 1 Score: 1025.4 bits (2650), Expect = 9.7e-296
Identity = 580/1407 (41.22%), Postives = 835/1407 (59.35%), Query Frame = 1

Query: 17   ISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEF 76
            + VKL + NY+LW +QI   + +     F+DG+   P + +   P E        INP F
Sbjct: 33   LPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSVCPEKEL--RPGE--------INPAF 92

Query: 77   TVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFASTSRARAMQIRMELST 136
                 QD+ +LS I SS+T  +++ ++G  ++  AW  LE+ F+S SRAR MQ+ +E  +
Sbjct: 93   VAXRRQDRTILSWIYSSLTPGIMAQIIGHNSSHSAWNALEKIFSSCSRARIMQLXLEFQS 152

Query: 137  IQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVY 196
             +K  M++ DY  KVK   D+LAAIG+ + +++ I  +L GLG DY+ +VT+I  R D  
Sbjct: 153  TKKGSMSMIDYIMKVKGAADSLAAIGEPVSEQDQIMNLLGGLGSDYNAVVTAINIREDKI 212

Query: 197  TVSDVYAHMLSYEMRHLRKGTFEQLS--SANNVNRISIRGGA---NGGRGSRGRSRQLN- 256
            ++  V++ +L++E R  ++G+ EQL   SAN  +  + RGG    NGGRG        N 
Sbjct: 213  SLEAVHSMLLAFEQRLEQQGSIEQLPAMSANYASXSNNRGGGRKYNGGRGPNFMMTNSNF 272

Query: 257  SGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQA--------- 316
             G G+  R     GRQ S   SS    CQ+CGK  H    C+HRFD  +Q+         
Sbjct: 273  RGRGRGXR-YGQSGRQNSS--SSERPQCQLCGKFGHTVQVCYHRFDITFQSTQNNTTGVS 332

Query: 317  ---ENNLKQAALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGL 376
                +N   A +A S   +D NWY+D+GA+ H+T ++  LT    YTG D++ + NG  L
Sbjct: 333  NSGNSNXMPAMVAXSNNXADDNWYLDSGASHHLTQNVANLTNATPYTGADKVTIGNGKHL 392

Query: 377  SISHIGNSLISGS--SLVLKHILYAPKINKHLISVQRLASDNNAVVEFHPNYFLVKNRVT 436
            +IS+   + +  +  S  LK + + P I+ +LISV +  SDNNA++EFH N F +K+  T
Sbjct: 393  TISNTXFTRLFSNPHSFQLKKVFHVPFISANLISVAKFCSDNNALIEFHSNGFFLKDLHT 452

Query: 437  KKLLLHGRCKNGLYVLP--HNFSQALL-----------TAKLSKEQWHRRLGHPASPITI 496
            K++L  G+ +NGLY  P   N   A +             +  +E WH RLGH A+ I  
Sbjct: 453  KRVLAQGKLENGLYKFPVISNKKTAYVGITNDSTFQCSNIENKRELWHHRLGHAATDIVT 512

Query: 497  RILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGP-SIASV 556
            RI+ + N++       +++C++CQL K+H+LP   S   ++ PL+L++TD+WGP S+ S 
Sbjct: 513  RIMHNCNVSCGKY--KATVCSSCQLAKSHRLPTHLSSFHASKPLELVYTDIWGPASVTST 572

Query: 557  NNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHR 616
            + +KY++ FVDD+SRY W+Y L+ K     +F  F+  VE     KI+ +Q D GGE+  
Sbjct: 573  SGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKXFKLQVENQFEAKIKCLQXDNGGEFRS 632

Query: 617  LHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACF 676
              ++ + +GI H  SCP+   QNG VERKHRH+VETGLALLA A +PL +W  AF TA F
Sbjct: 633  FMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATF 692

Query: 677  LINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGY 736
            LINRMPS+ +   +P   LF ++PDY  LRVFGC C+P +RPYNN KL +R+ +C+FLGY
Sbjct: 693  LINRMPSKVLXNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGY 752

Query: 737  SSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLASFY 796
            S  HKGY CL+  TGR+Y+S  VVFDE  FPF ++   + + +     ++P +       
Sbjct: 753  SLHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQNISSSPSKDASDESIIPXI------- 812

Query: 797  TENALTDIEPVVSNSHMNDGQTDNIASDNLSG-----VSLSSADNTRSSEEIAEYEAESS 856
                +    P   + H   G   ++AS NL+       S +    TR S E    EAE  
Sbjct: 813  ----IVSSNPSTLSFH---GSNHSMASPNLTSTLTHPTSPTDTPTTRXSRE-PVLEAE-V 872

Query: 857  SINAQNQTHEHVSDQPTEAASQHPMRTRLRNNIVQAKQFTDGTIRYSETSRKFASAVTIT 916
             + AQ Q    V   P        + TR  + I + K                     I 
Sbjct: 873  XLPAQQQV---VVPPPR-------VTTRSMSGITKRK--------------------PIF 932

Query: 917  TPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVK 976
                   +EP  L++A++ P W  AM+ E++AL +N TWDLV P   +N+I  KWVYK+K
Sbjct: 933  NLAASKISEPTTLKQAIKDPNWAEAMHTEIAALHKNQTWDLVDPPKDVNIIGCKWVYKLK 992

Query: 977  RKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQ 1036
             K DGSV+R KARLVA+GF Q FG+DY +TFSPV+K +TIR++L++ ++  W +RQ+D  
Sbjct: 993  YKXDGSVDRYKARLVARGFNQTFGLDYFETFSPVVKAATIRIVLTIXLSYRWELRQLD-- 1052

Query: 1037 NAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGF 1096
                       VYM QPPGF     P N +CKLKKALYGLKQ+P+AW ++L+  L+  GF
Sbjct: 1053 -----------VYMAQPPGFLHPNHP-NKVCKLKKALYGLKQSPRAWFTKLSSALLSXGF 1112

Query: 1097 KASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGDLEYF 1156
             +S  DSS+F+   R  T+ +L+YVDDII+  SS    ++LI KL   FA++DLG L YF
Sbjct: 1113 NSSRTDSSMFVHFGRHSTLIVLVYVDDIIVTGSSPILIQQLIHKLHSLFALRDLGQLSYF 1172

Query: 1157 LGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFK 1216
            LGIEV      + LSQR+Y  DLL+R +M   K  +TP      L +  G  +  ++   
Sbjct: 1173 LGIEVTYDGGSLHLSQRKYITDLLQRTSMLDSKAAATPGTVGLSLSQFDGDLM--DDVTM 1232

Query: 1217 YRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS 1276
            YRS VGALQY T+TRPD+AF++NK CQ++H PT  HW +VKRILRY+KGT+  G+ +Q S
Sbjct: 1233 YRSVVGALQYATLTRPDIAFSINKACQFMHRPTSTHWSSVKRILRYLKGTITHGLLLQPS 1292

Query: 1277 T-MMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANL 1336
                +  ++DADW   PDDRRS+SG+ V+LG NL+SW++ KQ  VSRSS E+EY+ +A  
Sbjct: 1293 AHFTIQAYTDADWGAQPDDRRSSSGYLVYLGNNLVSWTASKQKVVSRSSAESEYRGLAIA 1352

Query: 1337 TAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVAR 1384
            TAE+IW ++LL+EL +  +  P L+ DN+ A Y+  NPVFHARTKHIE+D HF+R+QV  
Sbjct: 1353 TAEIIWTQALLRELCISITSIPTLYYDNISAYYMAKNPVFHARTKHIEIDLHFIRDQVLH 1362

BLAST of CmaCh12G008360 vs. NCBI nr
Match: gi|1012364758|gb|KYP75940.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan])

HSP 1 Score: 1009.2 bits (2608), Expect = 7.2e-291
Identity = 579/1437 (40.29%), Postives = 834/1437 (58.04%), Query Frame = 1

Query: 12   SISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKII 71
            + S  IS KL+++N+L W  Q    +R   L   + G+M  P+Q        +    K +
Sbjct: 15   AFSNPISSKLSEDNFLTWRQQAESTIRGYRLKKHILGAMHVPAQH-----KTDEDKAKGV 74

Query: 72   INPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFASTSRARAMQIR 131
            ++PE+  +  QD L+ S +  S+  +    MVG     + W  LE  FAS ++AR  Q++
Sbjct: 75   LSPEYEDYDQQDNLLKSWLLESMEPQFKVRMVGYEWCHQIWNNLEIYFASQTKARVKQLK 134

Query: 132  MELSTIQKKDMTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITT 191
            ++L  I KK   I  Y  ++K + + LAAIG  +   E I  +  GL  +YDP +TS+ T
Sbjct: 135  IQLRGI-KKTTAINQYLLEIKKIVNNLAAIGSPLNTAEHIDAIFDGLSEEYDPFITSVLT 194

Query: 192  RTDVYTVSDVYAHMLSYEMRHLRKGTFEQL--------SSANNVNRISIRGGANGGRGSR 251
            RT+ Y+V  + + +++ E R  +    E +         S N+  + + +G  +   G+ 
Sbjct: 195  RTEEYSVEQIESLLMAQEERLEKHKASESVPLQANLAQGSFNSRKQFTNQGRGSNNNGTH 254

Query: 252  GRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAEN 311
            GR      G G+S +      +QP          CQ+CGK  H A  CWHR+DQ Y   N
Sbjct: 255  GRGPHRGRGRGRSAQHFGRGNKQP----------CQVCGKIGHIAFHCWHRYDQQYTEPN 314

Query: 312  -----------NLKQAALATSGYTS---DTNWYVDTGATDHITNDLERLTTRERYTGTDQ 371
                       N +Q     +G  +   D  WY D+GAT+H+T+DL  L ++  YTG D+
Sbjct: 315  LNHNTNVYNPGNQQQMQAMIAGSQNMVYDDQWYPDSGATNHLTSDLNNLGSKTDYTGQDK 374

Query: 372  IQVANGAGLSISHIGNSL----ISGSSLVLKHILYAPKINKHLISVQRLASDNNAVVEFH 431
            I + NG  + I+H G S     +S     LK +L+ P I K+L+SV +   DNN  VEFH
Sbjct: 375  IHMGNGQAIGINHTGTSFFHTPMSSKIFTLKELLHVPHITKNLLSVSKFCKDNNVYVEFH 434

Query: 432  PNYFLVKNRVTKKLLLHGRCKNGLYV------------------LPHNFSQALLT-AKLS 491
             NY LVK++ +K+ LL G  KNGLYV                  +P N +   +   + S
Sbjct: 435  TNYCLVKSQDSKETLLRGNLKNGLYVFDEVQILKPDVYEHTVDSVPTNRTTLYVQRTRKS 494

Query: 492  KEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAP 551
             + WH RL H +  I   +++  N+ +  N   S +C +C +GK+H LPF  S  V  +P
Sbjct: 495  YDVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSHTLPFSDSYTVYNSP 554

Query: 552  LQLIHTDVWGPS-IASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETML 611
            L+L+++DVWGPS  AS    +YYV F D FS+Y WIYF+  KS+    F+ F+  VE   
Sbjct: 555  LELVYSDVWGPSHYASREGFRYYVHFTDAFSKYTWIYFMHNKSETAHHFIHFKSMVENQF 614

Query: 612  NTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIVETGLALLAQ 671
              KI+  QSD G E+  L   F   GI H +SCPH+HQQNG  ERKHRHI E GL LL+ 
Sbjct: 615  GHKIKMFQSDGGKEFTCLTKLFNENGITHRLSCPHSHQQNGTAERKHRHITEVGLTLLSS 674

Query: 672  ANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPY 731
            + +P  +W +AF+TA  +INR+P+  +   +P   LF K PDY +LR FGCAC+P+LRP+
Sbjct: 675  SGLPHIFWSDAFSTAIHVINRLPTPILGHKSPYEVLFNKIPDYLLLRPFGCACYPHLRPF 734

Query: 732  NNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKT-- 791
            N+ K+ FR+++C+F+GYS  HKGYKC   + G+I ISR+VVFDE+ FP       N    
Sbjct: 735  NSHKMDFRSSQCVFIGYSMQHKGYKCFT-TNGKIIISRNVVFDEDTFPGPSYFNTNNVAG 794

Query: 792  -TNPHHPVLLPALAKLAS-FYTENALTDIEPVVSNSHMNDGQTDNIASDNLSGVSLSSAD 851
             ++ H P  +P++  L S     N+ T + P+VS+        +++    L+  + +S D
Sbjct: 795  LSSSHSPQPVPSIHVLPSQSLAPNSATTV-PLVSSI------DESLQDSQLTSTTDTSQD 854

Query: 852  NTRSSEEIAEYEAESSSINAQN--QTHEHVSDQPTEAASQHPMRTRLRNNIVQAKQFTDG 911
            N  +S         SS  N Q    T    +   T   +QHPM TR +  + + K F   
Sbjct: 855  NLITS---------SSQPNPQPIITTVPDPASPATRTTNQHPMITRAKIGVFKPKAFL-- 914

Query: 912  TIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLV 971
                                     +EP ++ +A+ +  W+ AM DE +AL +N TWDLV
Sbjct: 915  -----------------------ATSEPISVAQALDNKHWKQAMQDEYNALLKNHTWDLV 974

Query: 972  PPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRV 1031
               PG   I  KW++K K K DGS+ R KARLVA+GF Q+ G+DYTDTFSPV+KP +IR+
Sbjct: 975  SLPPGRTAITCKWIFKNKYKQDGSILRHKARLVARGFSQQQGLDYTDTFSPVVKPVSIRI 1034

Query: 1032 ILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQ 1091
            +L+LAV+KGW + Q+D+ NAFL+G LKE++YM QP GF + A   N +CKL+KALYGLKQ
Sbjct: 1035 VLALAVSKGWPIHQIDVDNAFLNGDLKEDIYMLQPQGFHNGA--PNTVCKLRKALYGLKQ 1094

Query: 1092 APKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLI 1151
            AP+AW  +LT  L++LGFK + +DSSLF   ++  +IY+LIYVDDIII S+S  A + LI
Sbjct: 1095 APRAWFQKLTLILLQLGFKQARSDSSLFTFTSKVTSIYILIYVDDIIITSNSPAAIQTLI 1154

Query: 1152 QKLKIDFAVKDLGDLEYFLGIEVKKT-RDGIILSQRRYALDLLKRVNMEKCKPMSTPMGS 1211
              L   F +KDLG L YFLGIEV      GI LSQ +Y  D+L ++NM   KP+ TPM  
Sbjct: 1155 STLHRFFPLKDLGSLHYFLGIEVNSDGAGGIHLSQTKYLKDILDKLNMSNAKPVKTPMAP 1214

Query: 1212 AEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVK 1271
            + KL  + G  +  +    YRS +GALQYLT+TRPD+A+ VNK+CQ++H P ++HW AVK
Sbjct: 1215 SLKLTND-GTAVCPDPSL-YRSVIGALQYLTITRPDIAYTVNKLCQFMHHPLESHWKAVK 1274

Query: 1272 RILRYVKGTLALGVKIQKST-MMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRK 1331
            R+LRY++GTL  G+  +KST   +  + D+DWA   +D RSTSG  V+LG N++SW ++K
Sbjct: 1275 RLLRYLQGTLQHGLHYKKSTDTGIHAYCDSDWASDHEDMRSTSGNCVYLGPNIVSWMAKK 1334

Query: 1332 QATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFH 1391
            Q  VSRSSTEAE++++A+L  E+ +I++LL EL    ++ P +WCDN GA  L++NPV H
Sbjct: 1335 QRVVSRSSTEAEFRSLASLVTEVQYIQNLLSELHNSSTQPPLIWCDNQGAVLLSANPVLH 1388

Query: 1392 ARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHLSERRSVD 1395
             +TKH E+D  FVRE+VAR  ++V+ I +  QVAD+LTK  S + F   L  + +VD
Sbjct: 1395 TKTKHFELDLWFVRERVARGQIQVKHIPARFQVADLLTKAPSSSIFLA-LRHKLTVD 1388