Cp4.1LG07g00100 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g00100
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionNucleic acid-binding, OB-fold-like protein
LocationCp4.1LG07 : 28719 .. 36218 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGTCGTGTCTCTGAAGATTCTAGCGCGAACATGAACAACCCCCGCGTCTCTGCTAGTTCCACCAAACCGGACCTCGAATCCTTGGCTTTACACGATGCCTATGAGGAACAAGATGAAGAGTTCTCCTTTGTGTGCGCCAACCCAAATGATTCCCCAATTAGCGCCGACGATGCCTTCTTTAACGGCCAGATCCGCCCCGTCTACCCACTCTTCGACAGAAGCCTCCTGTTCGTGGACGGGCAGGATTCCGAAACACCCGATAACCCTCCATTGCTTCGCCCGCCCTTGAGGAAGTTGTTCGTGGAAAAGCAATCGGAGTCGGATACGGAGCTGGAGGGAGTTGTTGAAGGCACCTACTGTGAGTGGTCTCCGACGACGGCGGAGCTCGGCAAGAAGAGCAACTCCACAGGCTTCTCCAAGCTCTGGAGATTCCGGGAATTTATGACGATGCGCCGAAGCAGCAGCGATGGCAAGGACGCCTTCGTTTTCTTGAGCAATCCCAATCCCACCACCCCAAAGTCCCCCCAAAACAAGCTACAACCTCAACCTCAATCGGATTCCAGAACCTCCACCTCCGCTCCAAAGCTCAACCGCCTCAAAGCCCAAACAGCATCCTCTGCCCACGAGATACACTACGTTAGAAGCAGAGCCCAGAAGCAAGTCGACAAACGCAGGTCCTATCTTCCCTACCGCCAGGATTTGCTTGGCTTCTTCACCAGCGTCAATGGATTCAGCAAAAATGTTCATCCTTTCTGAATCAATATTCTTCTGCAATTTCTTTTGTTCTTCTTCCCCTCTTTCTATTTTGTTGTAAATATTTCTGCCCCAATCAAGAATTTTGGCATTAGCAATGCAATGCGATGCGAGAGAAGATGAATTCTTTTGTTTGTAACTATGAACTATAACTTCAACAATTTCATGTATATATTACAAGTAGTCTCCATAACACCTCCCGGCCTTGGGTTCAAAACACAGCCACGAATTTCAATATTTAATATGACCAAATTGATACTCCAATTCTCAAATTTGTTTCAGTAATCTGCAGAAATAGAATTCATATTATTTACCATCTCCATCAATGCATTCAAGAATTTCATTGCTGCTGATTCCAAATCTCAAGTTGGAATTTTCGTAGACATCGAGCAGAGCTCGTAAATGGGGCTGCCATCTTCTGGATCTTTGTGAGTGTGAAAACCATCCTCTTGTGGGTCTTCAAAATTTTATTTCTTCTTCCATCCATGTAAAGGAAAAAAAAACCCCAAAACAATCATTCCCTAATTTCCTAATGTGTGATACACTCCCAATAATAGTCAACAATATATACATACATACACATATTTTAAAATACTTGTTATCTTCTATTTTTAATAGATACAAATATTTTAGAATGTTTTTATATTGGATTTTAAAACCATATTAATGGATGCAATAGAAGGAAAAAAAAAATATATTTATTTTTCACCTAATAATTCATATATGACCGATTCAAATCTCTAATTATTTATCGATAAATTCAAGAAAATTTGATGCGCCTTATCTTAATTCTTATCCAATATCGAGGAAAAAAAAAAAAAAAAAAAGTTTTCCTAATTTTATTTTCTGAAACCCCCGGGTGAGAAGGTAAAATCTGTAGGGTTAGACACGTGGTCGATTGCGATTAAAGTCTTCTGGCGAACAATCATCGACGGTTGTTATTCCATAGCAACTTTATATCTTTCCTCGAAGCTAGAGTTTGACGGCTACGTTTCTCAAATCAGATCGGCTTCCTTTCTCTGCCTTCGTCTTTGCCTCTGCCACTCGTAAAAGGTGATCTCTAAACCCTAAAATTTCAGTTCCGGTTATTCCTATGCCTATCCTTTTTCTGTTTTACACTTCTCTTCATTTCTTAACTTTTATTGGCGTTTAGGTTGCGACTTTCTGCTACCTGTTCGGTTTGCATGCCCTCTTTATGATTCCCATTTGGGTCATTCAAGTGTGAAATTTTATATGGAGATTGTGACGAGAAACACTCTCTGAACATTAAGTTTGTTGATTTATAGCTGATTTTCGTTTTTCTTCTAGTCCCACATTTGGCCACAGTAGTTTCATTATCTTTCATTTGATTCACGAAAAGTTTTCGAAAAGAAAAGTTCTGAACAATTATGTATATCCTTGGATGTAATATTAGTATTTGTGTTTAAGCGATTAATAGCTTAAATGCTCTCAAGCGATTAATGGTGTTGTAATTGGAGTGCCTGCTTGAGGTCTATTTGTTGGTGGGACGAGGGTTTAGAAGATTTGAAGTTAACCAAGAAAATGATATTGACGATAAATTAAGAGAACAAACAAGATGTTATTCGAGGAATCTATGCACCAAATGTGGTTGAGCGTGAAAACACTAATGTTCTGGTTGGAAATTCTAGTTATTAACACTTGTTTATCTTCTTGACTCTGGTTCATTTGATTTAAATCTGACAGAGTTGCTATATTATCTTCAATTTTTGAGACATAAAGTAGAAGATTGCATAATGGAGCAACCATCTGTGAGATCCCATATAGGTTGGAGAGGGAAATGAAACATTCCTTATCAGGGTGTGGAAACCTCTTCCTAGTAGATGCGTTTTAAAACCGTGAAGTTGGCGGCGATACGTAACGATAGACTTTGGCTATTACTAATGGTATCAGAGCCAGACATTGGGTGGTGTGCCAACGAGGACGCTAGGTCCCCAAGGAGGGTGGATTGTGAGATTCCGGTTGGAGAGTGGAACGAAGCATTTCTTGTAAGAGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACTATGAGGTTGACGGTGAAGAGTAACAGGCCAAAGTGGACAATTTGCTTTGGTTAAAATTTAATGTCAACATATTTTACATTTTGCTTTTGGTTGACCTAGTAGTCATATACAGGGTTGGAGAGAGTGGGTTCATAGGCACCGTACCTGAGATTTATACTATCCTGGTGGTCAATGTGATAGGTTAAGGCAATTATTGTGTTTCTTTGAATGAGGAATTTATTTATTTATCATTTTTTCATGGTTATTTTATCAATCCCAGCCTTTGTCCACCTTGGTGGTTTACTGGTGGTGTGGGCATTTTGTAAAAATTCACAATGTCAATCTATTGTCTAACTGTTTTGTTATTGTTTGTATATTGGCATGATTAGGTATTCGGGGAAATGGCAGAATCCAAACCTGGACTGAGGAAACCTGTATTTACCAAGGTTGATCAACTTCGGCCTGGCACTAGTGGGCATACTCTTACTGTTAAGGTTGTGAATACTAAGATGGTATTGCAGAAGGGTCGTCCTGATGGTCCTCAAGCCCGTCAGATGCGAATTGCTGAATGCTTGGTAGGTGATGAAACTGGAATGATCATATTTACCGCCAGAAATGATCAAGGTAAACTTACAAAAGTATTTGAGCCTGCACCATTTACGTAATTTTATCTTGTATGAAGCATGCCAATTTTCTTCTTTATGCTTACATTCTAAATCCACATGTAACTGAAGAGGTGCTGTGAAGAGTTTTAATAGTAACTGTTCTATATCGTGTGATCTCACTCCCTATCCACAATTACTGTGAAAGGTAAAGGATGTTTTGATATATTAACTTCCTACTAGTAAAGATTTCGTAAAGGGAGGCTTTCTGTTCTCTTAAAAGTTGTCATGGACCTTTTTTTTTCACTGGAAAAAAACTCGATTTTACTGAATACTGGGACATATGGAGGTTGAAATGCAAATCCAACTGAAATAAATCATCCATACTAAAAGTACCTTTTAAAAACTATAAGTTCATCACTTTGTCGGCTATATATATTGGTCAGTGTAATGGCTCATAGTTGGATAATGACTTGAATAGTTCAATTACACGACGGATTTTGGATAAAGTTAAAACTATACATTAGAAAGGATAAGCTCTACGCTGAATCTTGAGAATAATAGATTTTGAATGAACCTCCTGTGTATTATTTTGATTTTGATCTTATGAGTGAGATTGGTACTGGAAGGTCCATCAGCTGTAGTTAATGTTGTTTCTACAGTAGCTTCTTTTTTCCTATTGACTACATTTTTATATTTTTGTGTTTGGATCTGATTATGCATTCTGTTGAGTGTTAGTTCAGAATACTGTATGTTATTGGTAATATAAAGTAAGTGTAGATGCTTTTGTGATCAAAAGATCGTAGACTGTTTTATTGTAGGAGGGAGTAAGAGAATGAGAACTAATTGTTATCAATATTAAAAGTCATCTAGCTACTGGAACCTACTTGAACCAGTAATTTTGGCTTCTTGTTTTTGGAGGAACTACCATCACTCAGGAATCCAGGGCCATTTGATAACGTTTTTGTTTCTCATTTCTCGTTCCTATTACTATTTTGTTTTAGAAACATGCATTTTTGACAAATGATTTTGTTTCTCGTTTCCAAATCTAAAGAAATGTTTCCTCAAAGTATGAAGAATTTGGGGAATTCCAAAAAGAAGTTTCTGTTTTAATGTTTCTCTTTTCATTTTGGTTGTTCCAGCCTAAAGCATCCCAATTCCCAATGCGAAGGGAACGTGTTCGCTTGTTAACATATTTGCCTTTTTNTTCTTTATGCTTACATTCTAAATCCACATGTAACTGAAGAGGTGCTGTGAAGAGTTTTAATAATAACTGTTCTATATCGTGTGATCTCACTCCCTATCCACAATTACTGTGAAAGGTAAAGGATGTTTTGATATATTAACTTCCTACTAGTAAAGATTTCGTAAAGGGAGGCTTTCTGTTCTCTTAAAAGTTGTCATGGACCTTTTTTTTTCACTGGAAAAAAACTCGATTTTACTGAATACTGGGACATATGGAGGTTGAAATGCAAATCCAACTGAAATAAATCATCCATACTAAAAGTACCTTTTAAAAACTATAAGTTCATCACTTTGTCGGCTATATATATTGGTCAGTGTAATGGCTCATAGTTGGATAATGACTTGAATAGTTCAATTACACGACGGATTTTGGATAAAGTTAAAACTATACATTAGAAAGGATAAGCTCTACGCTGAATCTTGAGAATAATAGATTTTGAATGAACCTCCTGTGTATTATTTTGATTTTGATCTTATGAGTGAGATTGGTACTGGAAGGTCCATCAGCTGTAGTTAATGTTGTTTCTACAGTAGCTTCTTTTTTCCTATTGACTACATTTTTATATTTTTGTGTTTGGATCTGATTATGCATTCTGTTGAGTGTTAGTTCAGAATACTGTATGTTATTGGTAATATAAAGTAAGTGTAGATGCTTTTGTGATCAAAAGATCGTAGACTGTTTTATTGTAGGAGGGAGTAAGAGAATGAGAACTAATTGTTATCAATATTAAAAGTCATCTAGCTACTGGAACCTACTTGAACCAGTAATTTTGGCTTCTTGTTTTTGGAGGAACTACCATCACTCAGGAATCCAGGGCCATTTGATAACGTTTTTGTTTCTCATTTCTCGTTCCTATTACTATTTTGTTTTAGAAACATGCATTTTTGACAAATGATTTTGTTTCTCGTTTCCAAATCTAAAGAAATGTTTCCTCAAAGTATGAAGAATTTGGGGAATTCTATCTGGTCCTTTTTATATGTTTATTTATTTACTTTATTTACTTTTTGAACTTTAAATTTGATTTGGGATTTGAATAGATATTACAAATTTTACATTTTAATTAAAATAATTTTATTTGTATATTTAGCCATTACTTTTCATTTTTTACTATATAGTATATTATTTTTTACATGATATTACAAAGTTTTAAGGTGAATGGCGAGCGAGAAACAATATTCAAATTTGGACAACAGTTGAAGGATAGATTCAACTTTATTGTTGTGCTTCAATTTTGCATTGGGACTTAATTATAATGTAAAGTTTTGATAATTATTTTTATATGTTTTATTGCATGCTGTATGTTTTCTGTATTACATATACTATATTCAATTTGAGGTATAACAGAGAAAGAAATAGGAAGCAAGAAATAGTTATCAAACTAGTTTCTTTTTCTGTTTCTTGTTAGGAAGGAGAAATAGGTATTACATAAACTTTATTGTTGTTTGGTTTGATGTTGGACAATTGCAGTTTTTAGAACTCAAGGACACTAATGTACAACCTATAGAATAGATCCTGTTCAAGTAAGGTTGTTTATCAAATACACATAAATTAACACTGGTTTCAATTATTCACTTACTATTTCGTTTGTAAGTGAATAGTTGAATGGAAAACTGGTTAGTAACACCATGGCTTTGTAATTGTGTAGTTGCAATGAAAACTATTCCTCCTGCATGGGCAGATGAAAAAGGTGGACAAGAATGGAATTTTGTGCTAAGTAGTTGCAATGAAAACAGGTGGTGCAGGAACGAGCTAGGATTAAATTTTTTGTATGGCAAACTCTTATTGTAAAAATATAGCCCTCCGTGATTTGACCTATAGCCTATCTTTGTTCACGAGATTAGTAAATAGCGACATCCAGAATTTACTCCAAGCATTCAGGACAATTTTATAAGTTTACTGTGCCTTGCATTTTTTTAAAAATTCCAACTGACCCCTAAAATTTAATCTGGTTTAATTAACCAGCCCTTTATGTATATTTTATCTTAATTTTGAATGTCCATGTAGCCACTGTTCAATTTATTTACTTGAACTAATATTTCTTTTGGCATTTAATAAATGGAATTAAAGTTTCCGTAACTCATGTACTCGTAATTCTTTGCTTTCTTCTGTGTAGTCGACTTGATGAAAGAAGGTGCCACTATAATCCTGCGCAATGCTAAGATAGACATGTTCAAAGGATCAATGAGACTTGCTGTGGACAGGTGGGGCCGAGTTGAAGTTACTGAGCCTGCAAGTTTTACTGTTAAGGAAGAGAACAATCTTTCACTCATTGAATATGAACTCGTGAATGTGGTGGAAGAGTGAATTTTGTGATCGCGTTCACTTTCCTGCTGCAACCTGACCATAAAATAAAACAATCAAGCTACAAAATTACAAGTTTCCTTTGGGGTACTGAAAATGCTCACCGAGTTCATTATTAGGAAATAGAATTCTGGAAGCCAGTCGTACGAAAGTTGATTTTCATCCACGCAGCTTATTGTTAGAACCGTTGTTGGGATTTACAAACAGGTGGGTAATGGCTGCAGTTGATGGAAGAAGGCTTAGCCGGCTTTTTTTACTTTTCATTTGGCAAGTATTTTATTGGCTGTGACACAGTTTTATGATGTTGAAATTATCATAAGATGATGACAAGAGTAGCGCCTTGCGTGGTTTTAAATTATGTTTTTTTTATTAGTCAAGGTTCATGCCAACTGAACTGCTTTTGAACTCAAATCCAATGCTTGAATGATTGATTACCCTGCAAGTGTGAGGATTTCACGAGTAAATATCAGTCTCCGGTTTTAGGTTGCCCTTGTTCGTGTATGTGTTGTATGATGTGCTTCAGCAGGTCTTAATGTTGTGTGATAAGATCTTAGGATCAAGTT

mRNA sequence

ATGAAAAGTCGTGTCTCTGAAGATTCTAGCGCGAACATGAACAACCCCCGCGTCTCTGCTAGTTCCACCAAACCGGACCTCGAATCCTTGGCTTTACACGATGCCTATGAGGAACAAGATGAAGAGTTCTCCTTTGTGTGCGCCAACCCAAATGATTCCCCAATTAGCGCCGACGATGCCTTCTTTAACGGCCAGATCCGCCCCGTCTACCCACTCTTCGACAGAAGCCTCCTGTTCGTGGACGGGCAGGATTCCGAAACACCCGATAACCCTCCATTGCTTCGCCCGCCCTTGAGGAAGTTGTTCGTGGAAAAGCAATCGGAGTCGGATACGGAGCTGGAGGGAGTTGTTGAAGGCACCTACTGTGAGTGGTCTCCGACGACGGCGGAGCTCGGCAAGAAGAGCAACTCCACAGGCTTCTCCAAGCTCTGGAGATTCCGGGAATTTATGACGATGCGCCGAAGCAGCAGCGATGGCAAGGACGCCTTCGTTTTCTTGAGCAATCCCAATCCCACCACCCCAAAGTCCCCCCAAAACAAGCTACAACCTCAACCTCAATCGGATTCCAGAACCTCCACCTCCGCTCCAAAGCTCAACCGCCTCAAAGCCCAAACAGCATCCTCTGCCCACGAGATACACTACGTTAGAAGCAGAGCCCAGAAGCAAGTCGACAAACGCAGACATCGAGCAGAGCTCGTAAATGGGGCTGCCATCTTCTGGATCTTTGTATTCGGGGAAATGGCAGAATCCAAACCTGGACTGAGGAAACCTGTATTTACCAAGGTTGATCAACTTCGGCCTGGCACTAGTGGGCATACTCTTACTGTTAAGGTTGTGAATACTAAGATGGTATTGCAGAAGGGTCGTCCTGATGGTCCTCAAGCCCGTCAGATGCGAATTGCTGAATGCTTGGTAGGTGATGAAACTGGAATGATCATATTTACCGCCAGAAATGATCAAGTTGCAATGAAAACTATTCCTCCTGCATGGGCAGATGAAAAAGGTGGACAAGAATGGAATTTTGTGCTAATCGACTTGATGAAAGAAGGTGCCACTATAATCCTGCGCAATGCTAAGATAGACATGTTCAAAGGATCAATGAGACTTGCTGTGGACAGGTGGGGCCGAGTTGAAGTTACTGAGCCTGCAAGTTTTACTGTTAAGGAAGAGAACAATCTTTCACTCATTGAATATGAACTCGTGAATGTGGTGGAAGAGTGAATTTTGTGATCGCGTTCACTTTCCTGCTGCAACCTGACCATAAAATAAAACAATCAAGCTACAAAATTACAAGTTTCCTTTGGGGTACTGAAAATGCTCACCGAGTTCATTATTAGGAAATAGAATTCTGGAAGCCAGTCGTACGAAAGTTGATTTTCATCCACGCAGCTTATTGTTAGAACCGTTGTTGGGATTTACAAACAGGTGGGTAATGGCTGCAGTTGATGGAAGAAGGCTTAGCCGGCTTTTTTTACTTTTCATTTGGCAAGTATTTTATTGGCTGTGACACAGTTTTATGATGTTGAAATTATCATAAGATGATGACAAGAGTAGCGCCTTGCGTGGTTTTAAATTATGTTTTTTTTATTAGTCAAGGTTCATGCCAACTGAACTGCTTTTGAACTCAAATCCAATGCTTGAATGATTGATTACCCTGCAAGTGTGAGGATTTCACGAGTAAATATCAGTCTCCGGTTTTAGGTTGCCCTTGTTCGTGTATGTGTTGTATGATGTGCTTCAGCAGGTCTTAATGTTGTGTGATAAGATCTTAGGATCAAGTT

Coding sequence (CDS)

ATGAAAAGTCGTGTCTCTGAAGATTCTAGCGCGAACATGAACAACCCCCGCGTCTCTGCTAGTTCCACCAAACCGGACCTCGAATCCTTGGCTTTACACGATGCCTATGAGGAACAAGATGAAGAGTTCTCCTTTGTGTGCGCCAACCCAAATGATTCCCCAATTAGCGCCGACGATGCCTTCTTTAACGGCCAGATCCGCCCCGTCTACCCACTCTTCGACAGAAGCCTCCTGTTCGTGGACGGGCAGGATTCCGAAACACCCGATAACCCTCCATTGCTTCGCCCGCCCTTGAGGAAGTTGTTCGTGGAAAAGCAATCGGAGTCGGATACGGAGCTGGAGGGAGTTGTTGAAGGCACCTACTGTGAGTGGTCTCCGACGACGGCGGAGCTCGGCAAGAAGAGCAACTCCACAGGCTTCTCCAAGCTCTGGAGATTCCGGGAATTTATGACGATGCGCCGAAGCAGCAGCGATGGCAAGGACGCCTTCGTTTTCTTGAGCAATCCCAATCCCACCACCCCAAAGTCCCCCCAAAACAAGCTACAACCTCAACCTCAATCGGATTCCAGAACCTCCACCTCCGCTCCAAAGCTCAACCGCCTCAAAGCCCAAACAGCATCCTCTGCCCACGAGATACACTACGTTAGAAGCAGAGCCCAGAAGCAAGTCGACAAACGCAGACATCGAGCAGAGCTCGTAAATGGGGCTGCCATCTTCTGGATCTTTGTATTCGGGGAAATGGCAGAATCCAAACCTGGACTGAGGAAACCTGTATTTACCAAGGTTGATCAACTTCGGCCTGGCACTAGTGGGCATACTCTTACTGTTAAGGTTGTGAATACTAAGATGGTATTGCAGAAGGGTCGTCCTGATGGTCCTCAAGCCCGTCAGATGCGAATTGCTGAATGCTTGGTAGGTGATGAAACTGGAATGATCATATTTACCGCCAGAAATGATCAAGTTGCAATGAAAACTATTCCTCCTGCATGGGCAGATGAAAAAGGTGGACAAGAATGGAATTTTGTGCTAATCGACTTGATGAAAGAAGGTGCCACTATAATCCTGCGCAATGCTAAGATAGACATGTTCAAAGGATCAATGAGACTTGCTGTGGACAGGTGGGGCCGAGTTGAAGTTACTGAGCCTGCAAGTTTTACTGTTAAGGAAGAGAACAATCTTTCACTCATTGAATATGAACTCGTGAATGTGGTGGAAGAGTGA

Protein sequence

MKSRVSEDSSANMNNPRVSASSTKPDLESLALHDAYEEQDEEFSFVCANPNDSPISADDAFFNGQIRPVYPLFDRSLLFVDGQDSETPDNPPLLRPPLRKLFVEKQSESDTELEGVVEGTYCEWSPTTAELGKKSNSTGFSKLWRFREFMTMRRSSSDGKDAFVFLSNPNPTTPKSPQNKLQPQPQSDSRTSTSAPKLNRLKAQTASSAHEIHYVRSRAQKQVDKRRHRAELVNGAAIFWIFVFGEMAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGSMRLAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE
Homology
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BLAST of Cp4.1LG07g00100 vs. Swiss-Prot
Match: Y4844_ARATH (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.3e-40
Identity = 89/155 (57.42%), Postives = 108/155 (69.68%), Query Frame = 1 

Query: 255 RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQARQM---RIAECLVGDE 314
           RKPVF KV+QL+PGT+GHTLTVKV+   +V+   +K RP    +R     RI ECL+GDE
Sbjct: 18  RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDE 77

Query: 315 TGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGSMR 374
           TG I+FTARNDQV                       DLMK GAT+ILRN++IDMFKG+MR
Sbjct: 78  TGCILFTARNDQV-----------------------DLMKPGATVILRNSRIDMFKGTMR 137

Query: 375 LAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNV 404
           L VD+WGR+E T  ASFTVKE+NNLSL+EYEL+NV
Sbjct: 138 LGVDKWGRIEATGAASFTVKEDNNLSLVEYELINV 149

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BLAST of Cp4.1LG07g00100 vs. TrEMBL
Match: A0A0A0LNA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348250 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 9.1e-65
Identity = 134/160 (83.75%), Postives = 136/160 (85.00%), Query Frame = 1 

Query: 247 MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 306
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 307 DETGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGS 366
           DETGMIIFTARNDQV                       DLMKEGATI LRNAKIDMFKGS
Sbjct: 61  DETGMIIFTARNDQV-----------------------DLMKEGATITLRNAKIDMFKGS 120

Query: 367 MRLAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE 407
           MRLAVDRWGRVEVTEPA+FTVKE+NNLSLIEYELVNVVEE
Sbjct: 121 MRLAVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE 137

[Close]
BLAST of Cp4.1LG07g00100 vs. TrEMBL
Match: W9RCR1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027775 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.9e-63
Identity = 127/160 (79.38%), Postives = 141/160 (88.12%), Query Frame = 1 

Query: 247 MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 306
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVV+TKMVLQKGR DGPQ RQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRADGPQVRQMRIAECLVG 60

Query: 307 DETGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGS 366
           DETGMIIFTARNDQ     +   + +  G   ++ + +DL+KEG+T+ILRNAKIDMFKGS
Sbjct: 61  DETGMIIFTARNDQDMPGVM--NFDEMPGVMNFDEMPVDLVKEGSTVILRNAKIDMFKGS 120

Query: 367 MRLAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE 407
           MRLAVD+WGRVE+TEPA FTVKE+NNLSLIEYELVNVVEE
Sbjct: 121 MRLAVDKWGRVEITEPADFTVKEDNNLSLIEYELVNVVEE 158

[Close]
BLAST of Cp4.1LG07g00100 vs. TrEMBL
Match: A0A151TGI4_CAJCA (Uncharacterized protein At4g28440 family OS=Cajanus cajan GN=KK1_012448 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 6.5e-63
Identity = 129/160 (80.62%), Postives = 135/160 (84.38%), Query Frame = 1 

Query: 247 MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 306
           MA+SKPGLRKPVFTKVDQLRPGTSGHTLTVKVVN KMV+QKGRPDGPQ+RQMRIAECLVG
Sbjct: 1   MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRPDGPQSRQMRIAECLVG 60

Query: 307 DETGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGS 366
           DETGMIIFTARNDQV                       DLMKEGAT+ILRNAKIDMFKGS
Sbjct: 61  DETGMIIFTARNDQV-----------------------DLMKEGATVILRNAKIDMFKGS 120

Query: 367 MRLAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE 407
           MRLAVD+WGRVEVTEPASFTVKE+NNLSLIEYELVNVV E
Sbjct: 121 MRLAVDKWGRVEVTEPASFTVKEDNNLSLIEYELVNVVVE 137

[Close]
BLAST of Cp4.1LG07g00100 vs. TrEMBL
Match: A0A151TGI6_CAJCA (Uncharacterized protein At4g28440 family OS=Cajanus cajan GN=KK1_012449 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 8.5e-63
Identity = 128/160 (80.00%), Postives = 135/160 (84.38%), Query Frame = 1 

Query: 247 MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 306
           MA+SKPGLRKPVFTKVDQLRPGTSGHTLTVKVVN KMV+QKGRPDGPQ+RQMRIAECLVG
Sbjct: 1   MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRPDGPQSRQMRIAECLVG 60

Query: 307 DETGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGS 366
           DETGM+IFTARNDQV                       DLMKEGAT+ILRNAKIDMFKGS
Sbjct: 61  DETGMVIFTARNDQV-----------------------DLMKEGATVILRNAKIDMFKGS 120

Query: 367 MRLAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE 407
           MRLAVD+WGRVEVTEPASFTVKE+NNLSLIEYELVNVV E
Sbjct: 121 MRLAVDKWGRVEVTEPASFTVKEDNNLSLIEYELVNVVVE 137

[Close]
BLAST of Cp4.1LG07g00100 vs. TrEMBL
Match: A0A067JUR6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17741 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.1e-61
Identity = 128/160 (80.00%), Postives = 133/160 (83.12%), Query Frame = 1 

Query: 247 MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 306
           MA+SKPGLRKPVFTKVDQLRPGTSGHTLTVKVV+TKMVLQKGR DGPQ RQMRIAECLVG
Sbjct: 1   MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRADGPQIRQMRIAECLVG 60

Query: 307 DETGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGS 366
           DETGMIIFTARNDQV                       DL+KEG TIILRNAKIDMFKGS
Sbjct: 61  DETGMIIFTARNDQV-----------------------DLVKEGTTIILRNAKIDMFKGS 120

Query: 367 MRLAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE 407
           MRLAVD+WGRVEV EPASFTVKE+NNLSLIEYELVNVVEE
Sbjct: 121 MRLAVDKWGRVEVAEPASFTVKEDNNLSLIEYELVNVVEE 137

[Close]
BLAST of Cp4.1LG07g00100 vs. TAIR10
Match: AT1G23750.1 (AT1G23750.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 219.2 bits (557), Expect = 4.8e-57
Identity = 112/160 (70.00%), Postives = 128/160 (80.00%), Query Frame = 1 

Query: 247 MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLV 306
           MA+S K GL+KP FTKVDQLRPGTSGH + VK+V+TKMVLQKGR DGPQARQ+RI+EC+V
Sbjct: 1   MADSTKAGLKKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIV 60

Query: 307 GDETGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKG 366
           GDETG+I+FTARNDQV                       DLMKEG+T+ LRNAKIDM+KG
Sbjct: 61  GDETGVIVFTARNDQV-----------------------DLMKEGSTVTLRNAKIDMYKG 120

Query: 367 SMRLAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVE 406
           SMRLAVD+WGRVEVTEPASF VKE+ N+SLIEYELVNVVE
Sbjct: 121 SMRLAVDKWGRVEVTEPASFKVKEDTNMSLIEYELVNVVE 137

[Close]
BLAST of Cp4.1LG07g00100 vs. TAIR10
Match: AT1G10590.3 (AT1G10590.3 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 202.6 bits (514), Expect = 4.6e-52
Identity = 107/161 (66.46%), Postives = 124/161 (77.02%), Query Frame = 1 

Query: 246 EMAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKG--RPDGPQARQMRIAEC 305
           +MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+G  RP GPQ+RQMRIAEC
Sbjct: 14  KMAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAEC 73

Query: 306 LVGDETGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMF 365
           LVGDETG+IIFTARNDQV                       D+MKEG+ + LRNAKIDM+
Sbjct: 74  LVGDETGIIIFTARNDQV-----------------------DMMKEGSVVTLRNAKIDMY 133

Query: 366 KGSMRLAVDRWGRVEVT-EPASFTVKEENNLSLIEYELVNV 404
           KGSMRLAVDRWGRVEV  EP   TVK++NNLSLIEYELV+V
Sbjct: 134 KGSMRLAVDRWGRVEVAEEPTDITVKDDNNLSLIEYELVSV 151

[Close]
BLAST of Cp4.1LG07g00100 vs. TAIR10
Match: AT2G33845.1 (AT2G33845.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 180.6 bits (457), Expect = 1.9e-45
Identity = 97/153 (63.40%), Postives = 108/153 (70.59%), Query Frame = 1 

Query: 255 RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQARQMRIAECLVGDETGMII 314
           +KPVF KVDQL+PGTSGHTLTVKVV+   V QK G       R  RI+ECLVGDET  I+
Sbjct: 53  KKPVFVKVDQLKPGTSGHTLTVKVVDQNSVPQKPGAASSSHLRPARISECLVGDETACIL 112

Query: 315 FTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGSMRLAVDR 374
           FTARNDQV                       +LMK GAT+ LRNAKIDMFKGSMRLAVD+
Sbjct: 113 FTARNDQV-----------------------ELMKPGATVNLRNAKIDMFKGSMRLAVDK 172

Query: 375 WGRVEVTEPASFTVKEENNLSLIEYELVNVVEE 407
           WGR+E TEPA  TVKE+NNLSL+EYELVNVVEE
Sbjct: 173 WGRIEATEPADITVKEDNNLSLVEYELVNVVEE 182

[Close]
BLAST of Cp4.1LG07g00100 vs. TAIR10
Match: AT4G28440.1 (AT4G28440.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 168.7 bits (426), Expect = 7.4e-42
Identity = 89/155 (57.42%), Postives = 108/155 (69.68%), Query Frame = 1 

Query: 255 RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQARQM---RIAECLVGDE 314
           RKPVF KV+QL+PGT+GHTLTVKV+   +V+   +K RP    +R     RI ECL+GDE
Sbjct: 18  RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDE 77

Query: 315 TGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGSMR 374
           TG I+FTARNDQV                       DLMK GAT+ILRN++IDMFKG+MR
Sbjct: 78  TGCILFTARNDQV-----------------------DLMKPGATVILRNSRIDMFKGTMR 137

Query: 375 LAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNV 404
           L VD+WGR+E T  ASFTVKE+NNLSL+EYEL+NV
Sbjct: 138 LGVDKWGRIEATGAASFTVKEDNNLSLVEYELINV 149

[Close]
BLAST of Cp4.1LG07g00100 vs. TAIR10
Match: AT1G03810.1 (AT1G03810.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 156.4 bits (394), Expect = 3.8e-38
Identity = 82/150 (54.67%), Postives = 99/150 (66.00%), Query Frame = 1 

Query: 255 RKPVFTKVDQLRPGTSGHTLTVKVVNT---KMVLQKGRPDGPQARQMRIAECLVGDETGM 314
           RKPVF KVDQL+PGTSGHTL VKV+ +   K  ++K           RIAECL+GD+TG 
Sbjct: 15  RKPVFVKVDQLKPGTSGHTLIVKVLESNPVKPAIRKSSLTQQPISSPRIAECLIGDDTGC 74

Query: 315 IIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGSMRLAV 374
           I+FTARNDQV                       DLMK GAT+ILRNAKID+FK +MR+AV
Sbjct: 75  ILFTARNDQV-----------------------DLMKTGATVILRNAKIDLFKDTMRMAV 134

Query: 375 DRWGRVEVTEPASFTVKEENNLSLIEYELV 402
           DRWGR+E+T P SF V   NNLSL+EYE++
Sbjct: 135 DRWGRIEITGPVSFEVNRANNLSLVEYEVI 141

[Close]
BLAST of Cp4.1LG07g00100 vs. NCBI nr
Match: gi|449450468|ref|XP_004142984.1| (PREDICTED: uncharacterized protein At4g28440 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 1.3e-64
Identity = 134/160 (83.75%), Postives = 136/160 (85.00%), Query Frame = 1 

Query: 247 MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 306
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 307 DETGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGS 366
           DETGMIIFTARNDQV                       DLMKEGATI LRNAKIDMFKGS
Sbjct: 61  DETGMIIFTARNDQV-----------------------DLMKEGATITLRNAKIDMFKGS 120

Query: 367 MRLAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE 407
           MRLAVDRWGRVEVTEPA+FTVKE+NNLSLIEYELVNVVEE
Sbjct: 121 MRLAVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE 137

[Close]
BLAST of Cp4.1LG07g00100 vs. NCBI nr
Match: gi|703113752|ref|XP_010100463.1| (hypothetical protein L484_027775 [Morus notabilis])

HSP 1 Score: 250.8 bits (639), Expect = 4.2e-63
Identity = 127/160 (79.38%), Postives = 141/160 (88.12%), Query Frame = 1 

Query: 247 MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 306
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVV+TKMVLQKGR DGPQ RQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRADGPQVRQMRIAECLVG 60

Query: 307 DETGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGS 366
           DETGMIIFTARNDQ     +   + +  G   ++ + +DL+KEG+T+ILRNAKIDMFKGS
Sbjct: 61  DETGMIIFTARNDQDMPGVM--NFDEMPGVMNFDEMPVDLVKEGSTVILRNAKIDMFKGS 120

Query: 367 MRLAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE 407
           MRLAVD+WGRVE+TEPA FTVKE+NNLSLIEYELVNVVEE
Sbjct: 121 MRLAVDKWGRVEITEPADFTVKEDNNLSLIEYELVNVVEE 158

[Close]
BLAST of Cp4.1LG07g00100 vs. NCBI nr
Match: gi|1012354977|gb|KYP66164.1| (Uncharacterized protein At4g28440 family [Cajanus cajan])

HSP 1 Score: 249.6 bits (636), Expect = 9.4e-63
Identity = 129/160 (80.62%), Postives = 135/160 (84.38%), Query Frame = 1 

Query: 247 MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 306
           MA+SKPGLRKPVFTKVDQLRPGTSGHTLTVKVVN KMV+QKGRPDGPQ+RQMRIAECLVG
Sbjct: 1   MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRPDGPQSRQMRIAECLVG 60

Query: 307 DETGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGS 366
           DETGMIIFTARNDQV                       DLMKEGAT+ILRNAKIDMFKGS
Sbjct: 61  DETGMIIFTARNDQV-----------------------DLMKEGATVILRNAKIDMFKGS 120

Query: 367 MRLAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE 407
           MRLAVD+WGRVEVTEPASFTVKE+NNLSLIEYELVNVV E
Sbjct: 121 MRLAVDKWGRVEVTEPASFTVKEDNNLSLIEYELVNVVVE 137

[Close]
BLAST of Cp4.1LG07g00100 vs. NCBI nr
Match: gi|1012354978|gb|KYP66165.1| (Uncharacterized protein At4g28440 family [Cajanus cajan])

HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62
Identity = 128/160 (80.00%), Postives = 135/160 (84.38%), Query Frame = 1 

Query: 247 MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 306
           MA+SKPGLRKPVFTKVDQLRPGTSGHTLTVKVVN KMV+QKGRPDGPQ+RQMRIAECLVG
Sbjct: 1   MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRPDGPQSRQMRIAECLVG 60

Query: 307 DETGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGS 366
           DETGM+IFTARNDQV                       DLMKEGAT+ILRNAKIDMFKGS
Sbjct: 61  DETGMVIFTARNDQV-----------------------DLMKEGATVILRNAKIDMFKGS 120

Query: 367 MRLAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE 407
           MRLAVD+WGRVEVTEPASFTVKE+NNLSLIEYELVNVV E
Sbjct: 121 MRLAVDKWGRVEVTEPASFTVKEDNNLSLIEYELVNVVVE 137

[Close]
BLAST of Cp4.1LG07g00100 vs. NCBI nr
Match: gi|1012099909|ref|XP_015957084.1| (PREDICTED: uncharacterized protein At4g28440 [Arachis duranensis])

HSP 1 Score: 246.1 bits (627), Expect = 1.0e-61
Identity = 127/159 (79.87%), Postives = 134/159 (84.28%), Query Frame = 1 

Query: 247 MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 306
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVV+TK+V+QKGRPDGPQ RQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKLVMQKGRPDGPQPRQMRIAECLVG 60

Query: 307 DETGMIIFTARNDQVAMKTIPPAWADEKGGQEWNFVLIDLMKEGATIILRNAKIDMFKGS 366
           DETGMIIFTARNDQV                       D MKEG+T+ILRNAKIDMFKGS
Sbjct: 61  DETGMIIFTARNDQV-----------------------DEMKEGSTVILRNAKIDMFKGS 120

Query: 367 MRLAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVE 406
           MRLAVD+WGRVEVTEPASFTVKE+NNLSLIEYELVNVVE
Sbjct: 121 MRLAVDKWGRVEVTEPASFTVKEDNNLSLIEYELVNVVE 136

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g00100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y4844_ARATH1.3e-4057.42Uncharacterized protein At4g28440 OS=Arabidopsis thaliana GN=At4g28440 PE=1 SV=1[more]
BLAST of Cp4.1LG07g00100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNA1_CUCSA9.1e-6583.75Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348250 PE=4 SV=1[more]
W9RCR1_9ROSA2.9e-6379.38Uncharacterized protein OS=Morus notabilis GN=L484_027775 PE=4 SV=1[more]
A0A151TGI4_CAJCA6.5e-6380.63Uncharacterized protein At4g28440 family OS=Cajanus cajan GN=KK1_012448 PE=4 SV=... [more]
A0A151TGI6_CAJCA8.5e-6380.00Uncharacterized protein At4g28440 family OS=Cajanus cajan GN=KK1_012449 PE=4 SV=... [more]
A0A067JUR6_JATCU2.1e-6180.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17741 PE=4 SV=1[more]
BLAST of Cp4.1LG07g00100 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G23750.14.8e-5770.00 Nucleic acid-binding, OB-fold-like protein[more]
AT1G10590.34.6e-5266.46 Nucleic acid-binding, OB-fold-like protein[more]
AT2G33845.11.9e-4563.40 Nucleic acid-binding, OB-fold-like protein[more]
AT4G28440.17.4e-4257.42 Nucleic acid-binding, OB-fold-like protein[more]
AT1G03810.13.8e-3854.67 Nucleic acid-binding, OB-fold-like protein[more]
BLAST of Cp4.1LG07g00100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449450468|ref|XP_004142984.1|1.3e-6483.75PREDICTED: uncharacterized protein At4g28440 [Cucumis sativus][more]
gi|703113752|ref|XP_010100463.1|4.2e-6379.38hypothetical protein L484_027775 [Morus notabilis][more]
gi|1012354977|gb|KYP66164.1|9.4e-6380.63Uncharacterized protein At4g28440 family [Cajanus cajan][more]
gi|1012354978|gb|KYP66165.1|1.2e-6280.00Uncharacterized protein At4g28440 family [Cajanus cajan][more]
gi|1012099909|ref|XP_015957084.1|1.0e-6179.87PREDICTED: uncharacterized protein At4g28440 [Arachis duranensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012442DUF1645_plant
IPR012340NA-bd_OB-fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g00100.1Cp4.1LG07g00100.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012340Nucleic acid-binding, OB-foldGENE3DG3DSA:2.40.50.140coord: 258..401
score: 2.1
IPR012340Nucleic acid-binding, OB-foldunknownSSF50249Nucleic acid-binding proteinscoord: 251..403
score: 1.46
IPR012442Protein of unknown function DUF1645, plantPFAMPF07816DUF1645coord: 57..227
score: 2.1
NoneNo IPR availablePANTHERPTHR31472FAMILY NOT NAMEDcoord: 247..321
score: 9.1E-101coord: 345..406
score: 9.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG07g00100Cucsa.394190Cucumber (Gy14) v1cgycpeB1045
Cp4.1LG07g00100Cucsa.286060Cucumber (Gy14) v1cgycpeB0764
Cp4.1LG07g00100CmaCh05G000100Cucurbita maxima (Rimu)cmacpeB793
Cp4.1LG07g00100CmaCh12G000060Cucurbita maxima (Rimu)cmacpeB203
Cp4.1LG07g00100CmaCh04G017320Cucurbita maxima (Rimu)cmacpeB756
Cp4.1LG07g00100CmoCh12G000060Cucurbita moschata (Rifu)cmocpeB174
Cp4.1LG07g00100CmoCh05G000110Cucurbita moschata (Rifu)cmocpeB746
Cp4.1LG07g00100Cla000797Watermelon (97103) v1cpewmB780
Cp4.1LG07g00100Cla010085Watermelon (97103) v1cpewmB796
Cp4.1LG07g00100Csa2G348250Cucumber (Chinese Long) v2cpecuB813
Cp4.1LG07g00100MELO3C010663Melon (DHL92) v3.5.1cpemeB762
Cp4.1LG07g00100ClCG08G018030Watermelon (Charleston Gray)cpewcgB754
Cp4.1LG07g00100ClCG05G025340Watermelon (Charleston Gray)cpewcgB739
Cp4.1LG07g00100CSPI02G17000Wild cucumber (PI 183967)cpecpiB814
Cp4.1LG07g00100CSPI05G22680Wild cucumber (PI 183967)cpecpiB838
Cp4.1LG07g00100Lsi08G016800Bottle gourd (USVL1VR-Ls)cpelsiB691
Cp4.1LG07g00100Lsi04G005490Bottle gourd (USVL1VR-Ls)cpelsiB673
Cp4.1LG07g00100MELO3C010663.2Melon (DHL92) v3.6.1cpemedB898
Cp4.1LG07g00100MELO3C011996.2Melon (DHL92) v3.6.1cpemedB879
Cp4.1LG07g00100CsaV3_2G024610Cucumber (Chinese Long) v3cpecucB1007
Cp4.1LG07g00100CsaV3_5G031560Cucumber (Chinese Long) v3cpecucB1029
Cp4.1LG07g00100Bhi07G001383Wax gourdcpewgoB1057
Cp4.1LG07g00100Bhi04G000524Wax gourdcpewgoB1031
Cp4.1LG07g00100CsGy5G022190Cucumber (Gy14) v2cgybcpeB699
Cp4.1LG07g00100CsGy2G016990Cucumber (Gy14) v2cgybcpeB263
Cp4.1LG07g00100Carg21808Silver-seed gourdcarcpeB0711
Cp4.1LG07g00100Carg20513Silver-seed gourdcarcpeB0889
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG07g00100Cp4.1LG11g00570Cucurbita pepo (Zucchini)cpecpeB141
Cp4.1LG07g00100Cp4.1LG01g15340Cucurbita pepo (Zucchini)cpecpeB406
The following block(s) are covering this gene:

None