Cp4.1LG06g09330 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG06g09330
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG06 : 7475490 .. 7476020 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTTGAAGACGATTTCAGTTTCCCCACCGCTTTAGAGCCGTTCAATCGCTGCGGCATCGATTCGCCGCCGCTCTGGCGCCTCTCTCCCACCGCATCGCCTATTTCTTACCGTCAAAAAACAGCCTCCAATCGGAGTTTCAGAGACGATCAGAAGAGCGATCGGTTTGCGTCGGTGAGATTCTCGGCGTCGTTACAGAGGAGGAGGAGATTTTCGAGCGATGCGGCGATGGACGGCGAGGAGGAGGAGGAGGAGGTAGCGGCGGAGAAGATGGATGTGCTTTGGGAGAATTTCAACGAGGAGTTGTCGAGGAGTGGGAGATCTAGGTTGATGAAAACGGCGGAAATGGAGGAGATTGAGATTGTGAAAGCGCGGCGGCGGATGGCGGAATTGAATCTGTCGGAGACTTCCGGCGCGGTGGTGACGAGGAGGAAGGCGACGGGGAAGACGGCGTTTGTTAAGGCTTTGAAGAAGCTTTTCTTGTTGCATAACAATTCCCGCCGGAATCTGCAAACTCGATCACTGTGA

mRNA sequence

ATGGCGGTTGAAGACGATTTCAGTTTCCCCACCGCTTTAGAGCCGTTCAATCGCTGCGGCATCGATTCGCCGCCGCTCTGGCGCCTCTCTCCCACCGCATCGCCTATTTCTTACCGTCAAAAAACAGCCTCCAATCGGAGTTTCAGAGACGATCAGAAGAGCGATCGGTTTGCGTCGGTGAGATTCTCGGCGTCGTTACAGAGGAGGAGGAGATTTTCGAGCGATGCGGCGATGGACGGCGAGGAGGAGGAGGAGGAGGTAGCGGCGGAGAAGATGGATGTGCTTTGGGAGAATTTCAACGAGGAGTTGTCGAGGAGTGGGAGATCTAGGTTGATGAAAACGGCGGAAATGGAGGAGATTGAGATTGTGAAAGCGCGGCGGCGGATGGCGGAATTGAATCTGTCGGAGACTTCCGGCGCGGTGGTGACGAGGAGGAAGGCGACGGGGAAGACGGCGTTTGTTAAGGCTTTGAAGAAGCTTTTCTTGTTGCATAACAATTCCCGCCGGAATCTGCAAACTCGATCACTGTGA

Coding sequence (CDS)

ATGGCGGTTGAAGACGATTTCAGTTTCCCCACCGCTTTAGAGCCGTTCAATCGCTGCGGCATCGATTCGCCGCCGCTCTGGCGCCTCTCTCCCACCGCATCGCCTATTTCTTACCGTCAAAAAACAGCCTCCAATCGGAGTTTCAGAGACGATCAGAAGAGCGATCGGTTTGCGTCGGTGAGATTCTCGGCGTCGTTACAGAGGAGGAGGAGATTTTCGAGCGATGCGGCGATGGACGGCGAGGAGGAGGAGGAGGAGGTAGCGGCGGAGAAGATGGATGTGCTTTGGGAGAATTTCAACGAGGAGTTGTCGAGGAGTGGGAGATCTAGGTTGATGAAAACGGCGGAAATGGAGGAGATTGAGATTGTGAAAGCGCGGCGGCGGATGGCGGAATTGAATCTGTCGGAGACTTCCGGCGCGGTGGTGACGAGGAGGAAGGCGACGGGGAAGACGGCGTTTGTTAAGGCTTTGAAGAAGCTTTTCTTGTTGCATAACAATTCCCGCCGGAATCTGCAAACTCGATCACTGTGA

Protein sequence

MAVEDDFSFPTALEPFNRCGIDSPPLWRLSPTASPISYRQKTASNRSFRDDQKSDRFASVRFSASLQRRRRFSSDAAMDGEEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKTAEMEEIEIVKARRRMAELNLSETSGAVVTRRKATGKTAFVKALKKLFLLHNNSRRNLQTRSL
BLAST of Cp4.1LG06g09330 vs. TrEMBL
Match: A0A0A0K672_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G283910 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.8e-63
Identity = 141/176 (80.11%), Postives = 151/176 (85.80%), Query Frame = 1

Query: 1   MAVEDDFSFPTALEPFNRCGIDSPPLWRLSPTASPISYRQKTASNRSFRDDQKSDRFASV 60
           MAVE+DFSFPTALEPFNRCGIDSPPLW LSP+ASPISY Q+T+ + +FR D  SD   S 
Sbjct: 1   MAVEEDFSFPTALEPFNRCGIDSPPLWHLSPSASPISYPQQTSCDWNFR-DTASDGEISN 60

Query: 61  RF-SASLQRRRRFSSDAAMDGEEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKTAEMEE 120
           RF SASLQRRRRF SDAA++ EEEEE  AAEKMDVLWENFNEELSRS RSRLMKTAE EE
Sbjct: 61  RFPSASLQRRRRFLSDAAVNCEEEEEAEAAEKMDVLWENFNEELSRSRRSRLMKTAETEE 120

Query: 121 IEIVKARRRMAELNLSETSGAVVTRRKATGKTAFVKALKKLFLLHNNSRRNLQTRS 176
            E VKARRRMAE NLSETSGA+ TRRK  GKTAFVK LKKLFL+HNNSRRNLQTRS
Sbjct: 121 NETVKARRRMAEFNLSETSGAMATRRKTMGKTAFVKVLKKLFLMHNNSRRNLQTRS 175

BLAST of Cp4.1LG06g09330 vs. TrEMBL
Match: A0A061FJY8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_036336 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-13
Identity = 69/171 (40.35%), Postives = 96/171 (56.14%), Query Frame = 1

Query: 1   MAVEDDFSFPT--ALEPFNRCGIDSPPLWRLSPTASPISYRQKTASNRSFRDDQKSDRFA 60
           MA  ++FSFPT  AL P   CGIDSPPLWRLSP ASP  +  + A   S R+++  D F 
Sbjct: 1   MASTEEFSFPTTAALYP---CGIDSPPLWRLSPAASPDVFLDRKAKECSTREEE--DCFP 60

Query: 61  SVRFSASLQRRRRFS---SDAAMDGEEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKTA 120
             R     Q R+ FS     + +  ++   E   EKMD+LWE+FNEEL  S  SR   + 
Sbjct: 61  D-RPEKKHQERKSFSYVEKGSKVSSKKVAAEDEEEKMDLLWEDFNEELPTSRSSR--SSG 120

Query: 121 EMEEIEIVKARRRMAELNLSETSGAVVTRRKATGKTAFVKALKKLFLLHNN 167
           +M E+   +A      L LS+ + A+   R+  G   F++ L+KLFL+HN+
Sbjct: 121 DMVELGCAQA------LKLSKNNAAMFPPRR-PGMLVFMRVLRKLFLVHNS 156

BLAST of Cp4.1LG06g09330 vs. TrEMBL
Match: B9SLG7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0686540 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-11
Identity = 65/191 (34.03%), Postives = 100/191 (52.36%), Query Frame = 1

Query: 2   AVEDDFSFPT-ALEPFNRCGIDSPPLWRLSPTASP-----ISYRQKTASNRSFRDDQKSD 61
           A  DDF+FP  A +PF+  G+DSP LW LSP ASP         Q+    +   D  + +
Sbjct: 6   AAADDFTFPIFATDPFSS-GVDSPSLWHLSPAASPDHSCHAKPEQEQEREQGQEDSDQEE 65

Query: 62  RFASVRFSASLQRRRRFS--SDAAMDGEEEEEEVAAEKMDVLWENFNEELSRSGRSRLMK 121
            F          +R+ FS     +  GE ++ +   EKMD+LWE+FNEE++   RS+   
Sbjct: 66  DFQDCFPLYKPAQRKSFSWEEKGSKYGEVDDGDDKEEKMDMLWEDFNEEITSLKRSQSTS 125

Query: 122 --TAEMEEIEIVKARRRMAELNLSETSGAVVTRRK--ATGKTAFVKALKKLFLLHN---- 174
              ++ +    V    ++  + L++TS A+V+ +K    G   F+K LKKLFLLHN    
Sbjct: 126 RFDSDHDMANRVGCVHQLQSVKLNKTSTAMVSPKKPATAGFVVFIKVLKKLFLLHNSHHH 185

BLAST of Cp4.1LG06g09330 vs. TrEMBL
Match: M5VI77_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022692mg PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.5e-11
Identity = 64/174 (36.78%), Postives = 84/174 (48.28%), Query Frame = 1

Query: 6   DFSFPTALEPFNRCGIDSPPLWRLSPTASPISYRQKTASNRSFRDDQKSDRFASVRFSAS 65
           DFSFPT   P   C IDSPPLWRLSP AS     Q  +      DD+  +   ++     
Sbjct: 5   DFSFPTHKFP---CTIDSPPLWRLSPAASSKVDDQNHSEEEEEEDDE--EEIVNINVKYC 64

Query: 66  LQRRRRFS------SDAAMDGEEEEEEVAAEKMDVLWENFNEEL-SRSGRSRLMK---TA 125
            QRR+ FS           D E  + +   EKMD+LWE+FNEEL SRS  +       + 
Sbjct: 65  DQRRKSFSYIERGTKMVEKDQESRDHDHGEEKMDMLWEDFNEELKSRSNTTSDYSGGLSR 124

Query: 126 EMEEIEIVKARRRMAELNLSETSGAVVTRRKATGKTAFVKALKKLFLLHNNSRR 170
           EM  +  VKA        L+ET+G      +     A +K LK+LF LHN+  +
Sbjct: 125 EMLHLGCVKA------FKLTETNGDHALSTRKPSVVAVMKVLKRLFFLHNSHHK 167

BLAST of Cp4.1LG06g09330 vs. TrEMBL
Match: U5FEQ9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s11420g PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.6e-10
Identity = 62/182 (34.07%), Postives = 90/182 (49.45%), Query Frame = 1

Query: 5   DDFSFPTALEPFNRCGIDSPPLWRLSPTASPISYRQKTASNRS------------FRDDQ 64
           +DF+FP   +P + C IDSPPLW LSP ASP  Y ++T+   S            F++  
Sbjct: 4   EDFTFPIFTDPVS-CSIDSPPLWCLSPAASPDPYHEETSKESSTEGEERDQDEQVFKNSF 63

Query: 65  KSDRFASVRFSASLQRRRRFSSDAA----MDGEEEEEEVAAEKMDVLWENFN--EELSRS 124
            ++    +    S  RR    S A+     +G   ++E   EKMD+LWE+FN  E L+RS
Sbjct: 64  PTEPIKHLTQGKSFSRREELGSAASELVRRNGSLNDKE---EKMDMLWEDFNTEETLTRS 123

Query: 125 GRSRLMKTAEMEEIEIVKARRRMAELNLSETSGAVVTRRKATGKTAFVKALKKLFLLHNN 169
             S  +  +E   +  VKA      L LS+  G  +   +  G   F+  LK LFL+HN+
Sbjct: 124 HSSSRL-DSEAVHMGCVKA------LRLSKPKGTSIISARKPGLVVFMNVLKSLFLIHNS 174

BLAST of Cp4.1LG06g09330 vs. NCBI nr
Match: gi|659123054|ref|XP_008461465.1| (PREDICTED: uncharacterized protein LOC103500054 isoform X1 [Cucumis melo])

HSP 1 Score: 253.1 bits (645), Expect = 3.7e-64
Identity = 142/178 (79.78%), Postives = 156/178 (87.64%), Query Frame = 1

Query: 1   MAVEDDFSFPTALEPFNRCGIDSPPLWRLSPTASPISYRQKTASNRSFRDDQKSDRFASV 60
           MAVEDDFSFPTALEPFNRCG+DSPPLWRLSP+ASPISYRQ+ + +R+FRD   SD   S 
Sbjct: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTA-SDGEISN 60

Query: 61  RF-SASLQRRRRFSSDAAMDGEEEEEE--VAAEKMDVLWENFNEELSRSGRSRLMKTAEM 120
           RF SAS QRRRRF SDAA++GEEEEEE    AEKMDVLWENFNEELSRS RSRLMKTAE+
Sbjct: 61  RFPSASFQRRRRFLSDAAVNGEEEEEEEEAVAEKMDVLWENFNEELSRSRRSRLMKTAEL 120

Query: 121 EEIEIVKARRRMAELNLSETSGAVVTRRKATGKTAFVKALKKLFLLHNNSRRNLQTRS 176
           EE EIVKAR+RMAELNL ETSGA+ T RKATGKTAFVK LKKLFL+H++SRRNLQTRS
Sbjct: 121 EENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRS 177

BLAST of Cp4.1LG06g09330 vs. NCBI nr
Match: gi|778730295|ref|XP_011659753.1| (PREDICTED: uncharacterized protein LOC105436259 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 4.1e-63
Identity = 141/176 (80.11%), Postives = 151/176 (85.80%), Query Frame = 1

Query: 1   MAVEDDFSFPTALEPFNRCGIDSPPLWRLSPTASPISYRQKTASNRSFRDDQKSDRFASV 60
           MAVE+DFSFPTALEPFNRCGIDSPPLW LSP+ASPISY Q+T+ + +FR D  SD   S 
Sbjct: 1   MAVEEDFSFPTALEPFNRCGIDSPPLWHLSPSASPISYPQQTSCDWNFR-DTASDGEISN 60

Query: 61  RF-SASLQRRRRFSSDAAMDGEEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKTAEMEE 120
           RF SASLQRRRRF SDAA++ EEEEE  AAEKMDVLWENFNEELSRS RSRLMKTAE EE
Sbjct: 61  RFPSASLQRRRRFLSDAAVNCEEEEEAEAAEKMDVLWENFNEELSRSRRSRLMKTAETEE 120

Query: 121 IEIVKARRRMAELNLSETSGAVVTRRKATGKTAFVKALKKLFLLHNNSRRNLQTRS 176
            E VKARRRMAE NLSETSGA+ TRRK  GKTAFVK LKKLFL+HNNSRRNLQTRS
Sbjct: 121 NETVKARRRMAEFNLSETSGAMATRRKTMGKTAFVKVLKKLFLMHNNSRRNLQTRS 175

BLAST of Cp4.1LG06g09330 vs. NCBI nr
Match: gi|590603254|ref|XP_007019958.1| (Uncharacterized protein TCM_036336 [Theobroma cacao])

HSP 1 Score: 84.7 bits (208), Expect = 1.7e-13
Identity = 69/171 (40.35%), Postives = 96/171 (56.14%), Query Frame = 1

Query: 1   MAVEDDFSFPT--ALEPFNRCGIDSPPLWRLSPTASPISYRQKTASNRSFRDDQKSDRFA 60
           MA  ++FSFPT  AL P   CGIDSPPLWRLSP ASP  +  + A   S R+++  D F 
Sbjct: 1   MASTEEFSFPTTAALYP---CGIDSPPLWRLSPAASPDVFLDRKAKECSTREEE--DCFP 60

Query: 61  SVRFSASLQRRRRFS---SDAAMDGEEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKTA 120
             R     Q R+ FS     + +  ++   E   EKMD+LWE+FNEEL  S  SR   + 
Sbjct: 61  D-RPEKKHQERKSFSYVEKGSKVSSKKVAAEDEEEKMDLLWEDFNEELPTSRSSR--SSG 120

Query: 121 EMEEIEIVKARRRMAELNLSETSGAVVTRRKATGKTAFVKALKKLFLLHNN 167
           +M E+   +A      L LS+ + A+   R+  G   F++ L+KLFL+HN+
Sbjct: 121 DMVELGCAQA------LKLSKNNAAMFPPRR-PGMLVFMRVLRKLFLVHNS 156

BLAST of Cp4.1LG06g09330 vs. NCBI nr
Match: gi|255571786|ref|XP_002526836.1| (PREDICTED: uncharacterized protein LOC8262733 [Ricinus communis])

HSP 1 Score: 76.6 bits (187), Expect = 4.7e-11
Identity = 65/191 (34.03%), Postives = 100/191 (52.36%), Query Frame = 1

Query: 2   AVEDDFSFPT-ALEPFNRCGIDSPPLWRLSPTASP-----ISYRQKTASNRSFRDDQKSD 61
           A  DDF+FP  A +PF+  G+DSP LW LSP ASP         Q+    +   D  + +
Sbjct: 6   AAADDFTFPIFATDPFSS-GVDSPSLWHLSPAASPDHSCHAKPEQEQEREQGQEDSDQEE 65

Query: 62  RFASVRFSASLQRRRRFS--SDAAMDGEEEEEEVAAEKMDVLWENFNEELSRSGRSRLMK 121
            F          +R+ FS     +  GE ++ +   EKMD+LWE+FNEE++   RS+   
Sbjct: 66  DFQDCFPLYKPAQRKSFSWEEKGSKYGEVDDGDDKEEKMDMLWEDFNEEITSLKRSQSTS 125

Query: 122 --TAEMEEIEIVKARRRMAELNLSETSGAVVTRRK--ATGKTAFVKALKKLFLLHN---- 174
              ++ +    V    ++  + L++TS A+V+ +K    G   F+K LKKLFLLHN    
Sbjct: 126 RFDSDHDMANRVGCVHQLQSVKLNKTSTAMVSPKKPATAGFVVFIKVLKKLFLLHNSHHH 185

BLAST of Cp4.1LG06g09330 vs. NCBI nr
Match: gi|595791037|ref|XP_007199267.1| (hypothetical protein PRUPE_ppa022692mg [Prunus persica])

HSP 1 Score: 75.1 bits (183), Expect = 1.4e-10
Identity = 64/174 (36.78%), Postives = 84/174 (48.28%), Query Frame = 1

Query: 6   DFSFPTALEPFNRCGIDSPPLWRLSPTASPISYRQKTASNRSFRDDQKSDRFASVRFSAS 65
           DFSFPT   P   C IDSPPLWRLSP AS     Q  +      DD+  +   ++     
Sbjct: 5   DFSFPTHKFP---CTIDSPPLWRLSPAASSKVDDQNHSEEEEEEDDE--EEIVNINVKYC 64

Query: 66  LQRRRRFS------SDAAMDGEEEEEEVAAEKMDVLWENFNEEL-SRSGRSRLMK---TA 125
            QRR+ FS           D E  + +   EKMD+LWE+FNEEL SRS  +       + 
Sbjct: 65  DQRRKSFSYIERGTKMVEKDQESRDHDHGEEKMDMLWEDFNEELKSRSNTTSDYSGGLSR 124

Query: 126 EMEEIEIVKARRRMAELNLSETSGAVVTRRKATGKTAFVKALKKLFLLHNNSRR 170
           EM  +  VKA        L+ET+G      +     A +K LK+LF LHN+  +
Sbjct: 125 EMLHLGCVKA------FKLTETNGDHALSTRKPSVVAVMKVLKRLFFLHNSHHK 167

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K672_CUCSA2.8e-6380.11Uncharacterized protein OS=Cucumis sativus GN=Csa_7G283910 PE=4 SV=1[more]
A0A061FJY8_THECC1.2e-1340.35Uncharacterized protein OS=Theobroma cacao GN=TCM_036336 PE=4 SV=1[more]
B9SLG7_RICCO3.3e-1134.03Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0686540 PE=4 SV=1[more]
M5VI77_PRUPE9.5e-1136.78Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022692mg PE=4 SV=1[more]
U5FEQ9_POPTR3.6e-1034.07Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s11420g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659123054|ref|XP_008461465.1|3.7e-6479.78PREDICTED: uncharacterized protein LOC103500054 isoform X1 [Cucumis melo][more]
gi|778730295|ref|XP_011659753.1|4.1e-6380.11PREDICTED: uncharacterized protein LOC105436259 [Cucumis sativus][more]
gi|590603254|ref|XP_007019958.1|1.7e-1340.35Uncharacterized protein TCM_036336 [Theobroma cacao][more]
gi|255571786|ref|XP_002526836.1|4.7e-1134.03PREDICTED: uncharacterized protein LOC8262733 [Ricinus communis][more]
gi|595791037|ref|XP_007199267.1|1.4e-1036.78hypothetical protein PRUPE_ppa022692mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g09330.1Cp4.1LG06g09330.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 115..135
scor
NoneNo IPR availablePANTHERPTHR34666FAMILY NOT NAMEDcoord: 1..168
score: 1.2
NoneNo IPR availablePANTHERPTHR34666:SF1SUBFAMILY NOT NAMEDcoord: 1..168
score: 1.2

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG06g09330Cp4.1LG02g09250Cucurbita pepo (Zucchini)cpecpeB460
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG06g09330Cucurbita maxima (Rimu)cmacpeB505
Cp4.1LG06g09330Bottle gourd (USVL1VR-Ls)cpelsiB632
Cp4.1LG06g09330Bottle gourd (USVL1VR-Ls)cpelsiB634
Cp4.1LG06g09330Melon (DHL92) v3.5.1cpemeB714
Cp4.1LG06g09330Cucumber (Gy14) v2cgybcpeB982
Cp4.1LG06g09330Melon (DHL92) v3.6.1cpemedB848