MELO3C023663.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C023663.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr01 : 7613891 .. 7614427 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTTGAAGACGATTTCAGTTTCCCCACCGCCTTAGAGCCTTTCAACCGCTGCGGTGTCGATTCGCCGCCGCTCTGGCGTCTCTCTCCGTCCGCATCTCCGATTTCCTACCGTCAACAAATATCCTGCGATCGGAATTTCAGAGATACGGCGTCGGACGGTGAGATTAGCAATCGGTTCCCGTCGGCTTCGTTTCAGAGGAGGAGGAGGTTCTTGAGCGATGCGGCAGTGAACGGCGAGGAGGAGGAGGAGGAGGAGGAGGCGGTGGCGGAGAAGATGGATGTGCTTTGGGAGAATTTCAATGAGGAGTTGTCGAGGAGTCGGAGATCTAGGTTGATGAAAACGGCGGAATTGGAGGAGAATGAGATTGTAAAGGCGCGACAGCGGATGGCGGAATTAAACCTACCGGAGACTTCCGGTGCGATGGCGACGGGGAGGAAGGCGACGGGAAAGACGGCGTTTGTTAAGGTTTTGAAGAAGCTTTTCTTGATGCACAGTAGTTCCCGCCGGAATCTGCAAACTCGATCACGTTGA

mRNA sequence

ATGGCGGTTGAAGACGATTTCAGTTTCCCCACCGCCTTAGAGCCTTTCAACCGCTGCGGTGTCGATTCGCCGCCGCTCTGGCGTCTCTCTCCGTCCGCATCTCCGATTTCCTACCGTCAACAAATATCCTGCGATCGGAATTTCAGAGATACGGCGTCGGACGGTGAGATTAGCAATCGGTTCCCGTCGGCTTCGTTTCAGAGGAGGAGGAGGTTGATGAAAACGGCGGAATTGGAGGAGAATGAGATTGTAAAGGCGCGACAGCGGATGGCGGAATTAAACCTACCGGAGACTTCCGGTGCGATGGCGACGGGgAGGAAGGCGACGGGAAAGACGGCGTTTGTTAAGGTTTTGAAGAAGCTTTTCTTGATGCACAGTAGTTCCCGCCGGAATCTGCAAACTCGATCACGTTGA

Coding sequence (CDS)

ATGGCGGTTGAAGACGATTTCAGTTTCCCCACCGCCTTAGAGCCTTTCAACCGCTGCGGTGTCGATTCGCCGCCGCTCTGGCGTCTCTCTCCGTCCGCATCTCCGATTTCCTACCGTCAACAAATATCCTGCGATCGGAATTTCAGAGATACGGCGTCGGACGGTGAGATTAGCAATCGGTTCCCGTCGGCTTCGTTTCAGAGGAGGAGGAGGTTGATGAAAACGGCGGAATTGGAGGAGAATGAGATTGTAAAGGCGCGACAGCGGATGGCGGAATTAAACCTACCGGAGACTTCCGGTGCGATGGCGACGGGGAGGAAGGCGACGGGAAAGACGGCGTTTGTTAAGGTTTTGAAGAAGCTTTTCTTGATGCACAGTAGTTCCCGCCGGAATCTGCAAACTCGATCACGTTGA

Protein sequence

MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNRFPSASFQRRRRLMKTAELEENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR
BLAST of MELO3C023663.2 vs. NCBI nr
Match: XP_016902690.1 (PREDICTED: uncharacterized protein LOC103500054 isoform X2 [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 6.8e-62
Identity = 136/177 (76.84%), Postives = 136/177 (76.84%), Query Frame = 0

Query: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNR 60
           MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNR
Sbjct: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNR 60

Query: 61  FPSASFQ----------------------------------------RRRRLMKTAELEE 120
           FPSASFQ                                        RR RLMKTAELEE
Sbjct: 61  FPSASFQRXXXXXXXXXXXXXXXXXXXXXAEKMDVLWENFNEELSRSRRSRLMKTAELEE 120

Query: 121 NEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR 138
           NEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR
Sbjct: 121 NEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR 177

BLAST of MELO3C023663.2 vs. NCBI nr
Match: XP_008461465.1 (PREDICTED: uncharacterized protein LOC103500054 isoform X1 [Cucumis melo])

HSP 1 Score: 245.7 bits (626), Expect = 8.9e-62
Identity = 136/178 (76.40%), Postives = 136/178 (76.40%), Query Frame = 0

Query: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNR 60
           MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNR
Sbjct: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNR 60

Query: 61  FPSASFQ-----------------------------------------RRRRLMKTAELE 120
           FPSASFQ                                         RR RLMKTAELE
Sbjct: 61  FPSASFQXXXXXXXXXXXXXXXXXXXXXXXAEKMDVLWENFNEELSRSRRSRLMKTAELE 120

Query: 121 ENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR 138
           ENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR
Sbjct: 121 ENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR 178

BLAST of MELO3C023663.2 vs. NCBI nr
Match: XP_011659753.1 (PREDICTED: uncharacterized protein LOC105436259 [Cucumis sativus] >KGN44414.1 hypothetical protein Csa_7G283910 [Cucumis sativus])

HSP 1 Score: 215.7 bits (548), Expect = 9.8e-53
Identity = 120/176 (68.18%), Postives = 125/176 (71.02%), Query Frame = 0

Query: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNR 60
           MAVE+DFSFPTALEPFNRCG+DSPPLW LSPSASPISY QQ SCD NFRDTASDGEISNR
Sbjct: 1   MAVEEDFSFPTALEPFNRCGIDSPPLWHLSPSASPISYPQQTSCDWNFRDTASDGEISNR 60

Query: 61  FPSASFQRRR---------------------------------------RLMKTAELEEN 120
           FPSAS QRRR                                       RLMKTAE EEN
Sbjct: 61  FPSASLQRRRRFLSDAAVNCEEEEEAEAAEKMDVLWENFNEELSRSRRSRLMKTAETEEN 120

Query: 121 EIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR 138
           E VKAR+RMAE NL ETSGAMAT RK  GKTAFVKVLKKLFLMH++SRRNLQTRSR
Sbjct: 121 ETVKARRRMAEFNLSETSGAMATRRKTMGKTAFVKVLKKLFLMHNNSRRNLQTRSR 176

BLAST of MELO3C023663.2 vs. NCBI nr
Match: XP_022976943.1 (uncharacterized protein LOC111477161 [Cucurbita maxima])

HSP 1 Score: 181.4 bits (459), Expect = 2.1e-42
Identity = 107/176 (60.80%), Postives = 121/176 (68.75%), Query Frame = 0

Query: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFR-DTASDGEISN 60
           MAVEDDFSFPTALEP++RCG+DSPPLWRLSP+ASPISYRQ+ + +R+FR D  SDG  S 
Sbjct: 1   MAVEDDFSFPTALEPYSRCGIDSPPLWRLSPAASPISYRQRTASNRSFRDDQKSDGFASV 60

Query: 61  RFPSASFQR--------------------------------------RRRLMKTAELEEN 120
           RF SAS QR                                      R RLMKTAE+EE 
Sbjct: 61  RF-SASLQRXXXXXXXXXXXXXXXXXVAAEKMDVLWENFNEELSRSGRSRLMKTAEMEEI 120

Query: 121 EIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR 138
           EIVK R+RM ELNL ETSGA+AT RKATGKTAFVK LKKLFL+H++SRRNLQTRSR
Sbjct: 121 EIVKTRRRMTELNLSETSGAVATRRKATGKTAFVKALKKLFLLHNNSRRNLQTRSR 175

BLAST of MELO3C023663.2 vs. NCBI nr
Match: XP_023536234.1 (uncharacterized protein LOC111797464 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-41
Identity = 107/176 (60.80%), Postives = 119/176 (67.61%), Query Frame = 0

Query: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFR-DTASDGEISN 60
           MAVEDDFSFPTALEPFNRCG+DSPPLWRLSP+ASPISYRQ+ + +R+FR D  SD   S 
Sbjct: 1   MAVEDDFSFPTALEPFNRCGIDSPPLWRLSPTASPISYRQKTASNRSFRDDQKSDRFASV 60

Query: 61  RFPSASFQR---------------------------------------RRRLMKTAELEE 120
           RF SAS Q                                        R RLMKTAE+EE
Sbjct: 61  RF-SASLQXXXXXXXXXXXXXXXXXXXXXXEKMDVLWENFNEELSRSGRSRLMKTAEMEE 120

Query: 121 NEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRS 137
            EIVKAR+RMAELNL ETSGA+ T RKATGKTAFVK LKKLFL+H++SRRNLQTRS
Sbjct: 121 IEIVKARRRMAELNLSETSGAVVTRRKATGKTAFVKALKKLFLLHNNSRRNLQTRS 175

BLAST of MELO3C023663.2 vs. TrEMBL
Match: tr|A0A1S4E3Y6|A0A1S4E3Y6_CUCME (uncharacterized protein LOC103500054 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500054 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.5e-62
Identity = 136/177 (76.84%), Postives = 136/177 (76.84%), Query Frame = 0

Query: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNR 60
           MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNR
Sbjct: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNR 60

Query: 61  FPSASFQ----------------------------------------RRRRLMKTAELEE 120
           FPSASFQ                                        RR RLMKTAELEE
Sbjct: 61  FPSASFQRXXXXXXXXXXXXXXXXXXXXXAEKMDVLWENFNEELSRSRRSRLMKTAELEE 120

Query: 121 NEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR 138
           NEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR
Sbjct: 121 NEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR 177

BLAST of MELO3C023663.2 vs. TrEMBL
Match: tr|A0A1S3CEP4|A0A1S3CEP4_CUCME (uncharacterized protein LOC103500054 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500054 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.9e-62
Identity = 136/178 (76.40%), Postives = 136/178 (76.40%), Query Frame = 0

Query: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNR 60
           MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNR
Sbjct: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNR 60

Query: 61  FPSASFQ-----------------------------------------RRRRLMKTAELE 120
           FPSASFQ                                         RR RLMKTAELE
Sbjct: 61  FPSASFQXXXXXXXXXXXXXXXXXXXXXXXAEKMDVLWENFNEELSRSRRSRLMKTAELE 120

Query: 121 ENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR 138
           ENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR
Sbjct: 121 ENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR 178

BLAST of MELO3C023663.2 vs. TrEMBL
Match: tr|A0A0A0K672|A0A0A0K672_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G283910 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 6.5e-53
Identity = 120/176 (68.18%), Postives = 125/176 (71.02%), Query Frame = 0

Query: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEISNR 60
           MAVE+DFSFPTALEPFNRCG+DSPPLW LSPSASPISY QQ SCD NFRDTASDGEISNR
Sbjct: 1   MAVEEDFSFPTALEPFNRCGIDSPPLWHLSPSASPISYPQQTSCDWNFRDTASDGEISNR 60

Query: 61  FPSASFQRRR---------------------------------------RLMKTAELEEN 120
           FPSAS QRRR                                       RLMKTAE EEN
Sbjct: 61  FPSASLQRRRRFLSDAAVNCEEEEEAEAAEKMDVLWENFNEELSRSRRSRLMKTAETEEN 120

Query: 121 EIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTRSR 138
           E VKAR+RMAE NL ETSGAMAT RK  GKTAFVKVLKKLFLMH++SRRNLQTRSR
Sbjct: 121 ETVKARRRMAEFNLSETSGAMATRRKTMGKTAFVKVLKKLFLMHNNSRRNLQTRSR 176

BLAST of MELO3C023663.2 vs. TrEMBL
Match: tr|A0A1R3JR28|A0A1R3JR28_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_04633 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.7e-08
Identity = 48/146 (32.88%), Postives = 77/146 (52.74%), Query Frame = 0

Query: 5   DDFSFPTALEPFNRCGVDSPPLWRLSPSASPISY----RQQISCDRNFRDTASDGEISNR 64
           +DFSFPT  + F  CG+DSPPLWRLSP+ASP  +     +Q   +  F D  +D +    
Sbjct: 4   EDFSFPTTADLF-PCGIDSPPLWRLSPAASPDVFLDRKSKQEEEEECFLDIVADKDHDQE 63

Query: 65  FPSASF-QRRRRLMKTAELEEN--------------EIVKARQRMAELNLPET--SGAMA 124
             S S+ ++ ++++  +ELEE+              E+ ++      L L +T  + AM 
Sbjct: 64  RKSFSYIEKSKKVVVDSELEEDAEEKMDILWEDFNEELARSGSSKEALKLSKTNAASAMF 123

Query: 125 TGRKATGKTAFVKVLKKLFLMHSSSR 130
             R+  G   F++  +KLFL+H+S R
Sbjct: 124 APRRPAGMLVFMRGFRKLFLLHNSHR 148

BLAST of MELO3C023663.2 vs. TrEMBL
Match: tr|A0A1R3JIF2|A0A1R3JIF2_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16292 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.1e-07
Identity = 48/143 (33.57%), Postives = 69/143 (48.25%), Query Frame = 0

Query: 5   DDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRN----FRDTASDGEISNR 64
           +DFSFPT  + F  CG+DSPPLWRLSP+ASP  +  + S        F D   D      
Sbjct: 4   EDFSFPTTADLF-PCGIDSPPLWRLSPAASPDVFLDRKSKQEEEEDCFLDIVEDKXXXXX 63

Query: 65  FPSASF---QRRRRLMKTAELEE---------NEIVKARQRMAELNLPET--SGAMATGR 124
               S    +R ++++     E+          E+  +      L L ET  + AM   R
Sbjct: 64  XXRRSISYVERSKKVVAXXXXEKMDLLWEDFNEELATSGSSKEALKLSETNAASAMFAPR 123

Query: 125 KATGKTAFVKVLKKLFLMHSSSR 130
           +  G   F++VL+KLFL+H+S R
Sbjct: 124 RPAGMLVFMRVLRKLFLLHTSHR 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016902690.16.8e-6276.84PREDICTED: uncharacterized protein LOC103500054 isoform X2 [Cucumis melo][more]
XP_008461465.18.9e-6276.40PREDICTED: uncharacterized protein LOC103500054 isoform X1 [Cucumis melo][more]
XP_011659753.19.8e-5368.18PREDICTED: uncharacterized protein LOC105436259 [Cucumis sativus] >KGN44414.1 hy... [more]
XP_022976943.12.1e-4260.80uncharacterized protein LOC111477161 [Cucurbita maxima][more]
XP_023536234.11.3e-4160.80uncharacterized protein LOC111797464 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S4E3Y6|A0A1S4E3Y6_CUCME4.5e-6276.84uncharacterized protein LOC103500054 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3CEP4|A0A1S3CEP4_CUCME5.9e-6276.40uncharacterized protein LOC103500054 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0K672|A0A0A0K672_CUCSA6.5e-5368.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G283910 PE=4 SV=1[more]
tr|A0A1R3JR28|A0A1R3JR28_COCAP3.7e-0832.88Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_04633 PE=4 ... [more]
tr|A0A1R3JIF2|A0A1R3JIF2_9ROSI4.1e-0733.57Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16292 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005575 cellular_component
cellular_component GO:0022627 cytosolic small ribosomal subunit
molecular_function GO:0003674 molecular_function
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023663.2.1MELO3C023663.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..89
NoneNo IPR availablePANTHERPTHR34666FAMILY NOT NAMEDcoord: 4..81
NoneNo IPR availablePANTHERPTHR34666:SF1SUBFAMILY NOT NAMEDcoord: 4..81