Cp4.1LG04g01940 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g01940
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Protein of unknown function (DUF1685)
Location	Cp4.1LG04 : 174584 .. 175492 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACTCGGTCGGGCTGGCTGCGACTTTCTTCCCATTCTCAACCAAGACACTTCCCAACTTCCCCTATTCCCGTCCCCAGTCCCGACCCGGCCGTCTCCTCGTAAGCGCGGTTGGCGGGTTATCACTAGCCGCCACCGCCGAACTCCTAATGGACAACAAACGCTTAAAAAGAATCACATCAGCTCTATCGCCATTATCATCATGTTCGTCACTCTACGAGCCAGATAACGAGCTAAAACACATGCAATTAGCATCATCATGTTTAAAAAACAAGAAACGTTTATCAAAACAACTTTCAATGTGTGAAACACCAAGAGAACTCGCATGGGAGAAACGACGACGACGAATGCTCCGACCTAGAAACGGAAGCTCGACCGATAGAGATGACTTAACAGACGAAGATTGGAATGAGCTAAAAGGGTGTATCGAATTAGGGTTTGCATTCAACGAGGAAGATGGACATAAGTTGTGTGGTACATTACCAGCTCTTGACTTATACTTCGCCGTGAATCGACAGCTCTCGCCGAGTCCAGTGTCGACGCCGCATAGTAGCACGTCTACGTCGTCGTCGTCGCTCGGGGGACGAGGTTCATCGTGCGAGAGCCCGAGGGGTGATTGTGAAACATGGAGGGTTTGCAGCCCAGGTAAGGAGAGATTTGAGATTGTTTATAATGAAATTAAAGGAATTGAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANGAATTTGTTCAGGGCAAGATCCGAAGCAAGTGAAGGCAAAATTAAGACATTGGGCTCAAGCAGTGGCATGTTCGGTAATGCAATCATTGGGAGAAAAATAAAAAGGGAATAATGACGTGTACAGAACAGAAGAGAAAAAAAAATTAAAAAAAAAAAAA

mRNA sequence

TTACTCGGTCGGGCTGGCTGCGACTTTCTTCCCATTCTCAACCAAGACACTTCCCAACTTCCCCTATTCCCGTCCCCAGTCCCGACCCGGCCGTCTCCTCGTAAGCGCGGTTGGCGGGTTATCACTAGCCGCCACCGCCGAACTCCTAATGGACAACAAACGCTTAAAAAGAATCACATCAGCTCTATCGCCATTATCATCATGTTCGTCACTCTACGAGCCAGATAACGAGCTAAAACACATGCAATTAGCATCATCATGTTTAAAAAACAAGAAACGTTTATCAAAACAACTTTCAATGTGTGAAACACCAAGAGAACTCGCATGGGAGAAACGACGACGACGAATGCTCCGACCTAGAAACGGAAGCTCGACCGATAGAGATGACTTAACAGACGAAGATTGGAATGAGCTAAAAGGGTGTATCGAATTAGGGTTTGCATTCAACGAGGAAGATGGACATAAGTTGTGTGGTACATTACCAGCTCTTGACTTATACTTCGCCGTGAATCGACAGCTCTCGCCGAGTCCAGTGTCGACGCCGCATAGTAGCACGTCTACGTCGTCGTCGTCGCTCGGGGGACGAGGTTCATCGTGCGAGAGCCCGAGGGGTGATTGTGAAACATGGAGGGTTTGCAGCCCAGGGCAAGATCCGAAGCAAGTGAAGGCAAAATTAAGACATTGGGCTCAAGCAGTGGCATGTTCGGTAATGCAATCATTGGGAGAAAAATAAAAAGGGAATAATGACGTGTACAGAACAGAAGAGAAAAAAAAATTAAAAAAAAAAAAA

Coding sequence (CDS)

ATGGACAACAAACGCTTAAAAAGAATCACATCAGCTCTATCGCCATTATCATCATGTTCGTCACTCTACGAGCCAGATAACGAGCTAAAACACATGCAATTAGCATCATCATGTTTAAAAAACAAGAAACGTTTATCAAAACAACTTTCAATGTGTGAAACACCAAGAGAACTCGCATGGGAGAAACGACGACGACGAATGCTCCGACCTAGAAACGGAAGCTCGACCGATAGAGATGACTTAACAGACGAAGATTGGAATGAGCTAAAAGGGTGTATCGAATTAGGGTTTGCATTCAACGAGGAAGATGGACATAAGTTGTGTGGTACATTACCAGCTCTTGACTTATACTTCGCCGTGAATCGACAGCTCTCGCCGAGTCCAGTGTCGACGCCGCATAGTAGCACGTCTACGTCGTCGTCGTCGCTCGGGGGACGAGGTTCATCGTGCGAGAGCCCGAGGGGTGATTGTGAAACATGGAGGGTTTGCAGCCCAGGGCAAGATCCGAAGCAAGTGAAGGCAAAATTAAGACATTGGGCTCAAGCAGTGGCATGTTCGGTAATGCAATCATTGGGAGAAAAATAA

Protein sequence

MDNKRLKRITSALSPLSSCSSLYEPDNELKHMQLASSCLKNKKRLSKQLSMCETPRELAWEKRRRRMLRPRNGSSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQSLGEK

Homology

[Close]

BLAST of Cp4.1LG04g01940 vs. TrEMBL
Match: A0A0A0LY38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690230 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.5e-81
Identity = 161/194 (82.99%), Postives = 173/194 (89.18%), Query Frame = 1


Query: 1   MDNKRLKRITSALSPLSSCSSLYEPDNELKHMQLASSCLKNKKRLSKQLSMCETPRELAW 60
           MD K L+R+ S+LS  SSC SL+E ++ELKHM LA   LKNKKRLSKQLSMCETPR+LAW
Sbjct: 1   MDKKHLQRVPSSLSSSSSCPSLHESEDELKHMPLAPPQLKNKKRLSKQLSMCETPRDLAW 60

Query: 61  EKRRRRMLRPRNGSSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 120
           EKRRR+MLRPRNG STDRDDLTDEDWNELKG IELGFAFNEE GHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRNG-STDRDDLTDEDWNELKGFIELGFAFNEEYGHKLCGTLPALDLYFAV 120

Query: 121 NRQLSPSPVSTPHSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWA 180
           NRQLSPSPVSTP SS S +SSSLGGR SS ESPR + +TWRVCSPG+DPKQVKAKLRHWA
Sbjct: 121 NRQLSPSPVSTPQSSAS-ASSSLGGRSSSFESPRSELDTWRVCSPGEDPKQVKAKLRHWA 180

Query: 181 QAVACSVMQSLGEK 195
           QAVACSVMQSLGEK
Sbjct: 181 QAVACSVMQSLGEK 192

[Close]

BLAST of Cp4.1LG04g01940 vs. TrEMBL
Match: A0A0S3SQ61_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G161300 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.9e-58
Identity = 124/178 (69.66%), Postives = 139/178 (78.09%), Query Frame = 1


Query: 13  LSPLSSCSSLYEPDNELKHMQLASSCLKNKKRLSKQLSMCETPRELAWEKRRRRMLRPRN 72
           LS  SS SS  E D EL+HM LA    K+KKRLSKQLSMCE PR++AWE+RR   ++ R 
Sbjct: 23  LSSSSSSSSPSESDEELQHMLLAPPLWKDKKRLSKQLSMCEKPRDIAWERRR---MQERR 82

Query: 73  GSSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTP 132
            SST  DDLTDED NELKGCIELGF FNEEDG +LC TLPALDLYFAVNR+LSPSPVSTP
Sbjct: 83  RSSTVCDDLTDEDLNELKGCIELGFGFNEEDGQRLCNTLPALDLYFAVNRRLSPSPVSTP 142

Query: 133 HSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 191
            S     +SSLGGR SS  SPR D ++W++CSPG DP+ VK KLRHWAQAVACSVMQS
Sbjct: 143 QS----RASSLGGRSSSFGSPRSDSDSWKICSPGDDPEHVKTKLRHWAQAVACSVMQS 193

[Close]

BLAST of Cp4.1LG04g01940 vs. TrEMBL
Match: V7BG30_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G188200g PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-56
Identity = 121/180 (67.22%), Postives = 138/180 (76.67%), Query Frame = 1


Query: 11  SALSPLSSCSSLYEPDNELKHMQLASSCLKNKKRLSKQLSMCETPRELAWEKRRRRMLRP 70
           S+ S  SS SS  E D EL+HM LA     N K+LSKQLSMCE PR++AWE+RR   ++ 
Sbjct: 19  SSSSSSSSSSSPSESDEELQHMLLAPPLWSNNKKLSKQLSMCEKPRDIAWERRR---MQE 78

Query: 71  RNGSSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVS 130
           R  SST  DDLTDED +ELKGCIELGF FNEEDG +LC TLPALDLYFAVNR+LSPSPVS
Sbjct: 79  RRRSSTVCDDLTDEDLHELKGCIELGFGFNEEDGQRLCNTLPALDLYFAVNRRLSPSPVS 138

Query: 131 TPHSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 190
           TP S     +SSLGGR SS  SPR D ++W++CSPG DP+ VK KLRHWAQAVACSVMQS
Sbjct: 139 TPQS----RASSLGGRSSSFGSPRSDADSWKICSPGDDPEHVKTKLRHWAQAVACSVMQS 191

[Close]

BLAST of Cp4.1LG04g01940 vs. TrEMBL
Match: M5W1A3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016189mg PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.2e-56
Identity = 125/194 (64.43%), Postives = 148/194 (76.29%), Query Frame = 1


Query: 1   MDNKRLKRITSALSPLSSCSSLYEPDNELKHMQLASSCLKNKKRLSKQLSMCETPRELAW 60
           M +++ +  TS  S LS   SL   + EL+HM LA   + N+KRLSKQLSMCETPR++AW
Sbjct: 1   MKDEQCRPPTSYSSSLSL--SLSSSEEELQHMPLAPPKMLNRKRLSKQLSMCETPRDIAW 60

Query: 61  EKRRRRMLRP--RNGSSTDRDD--LTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDL 120
           EKRRR++LR   R     D DD  LTDED +ELKGCIELGF FNEE+G +LC TLPALDL
Sbjct: 61  EKRRRQILRQERRRNGINDSDDMVLTDEDLHELKGCIELGFGFNEEEGQRLCPTLPALDL 120

Query: 121 YFAVNRQLSPSPVSTPHSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKL 180
           YFAVNRQ SPSPVSTP+S+   S+SSLGGR SS  SPR D + W++CSPG +P+QVK KL
Sbjct: 121 YFAVNRQFSPSPVSTPNSARH-STSSLGGRSSSFGSPRSDTDAWKICSPGDNPQQVKTKL 180

Query: 181 RHWAQAVACSVMQS 191
           RHWAQAVACSVMQS
Sbjct: 181 RHWAQAVACSVMQS 191

[Close]

BLAST of Cp4.1LG04g01940 vs. TrEMBL
Match: V4SEL2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030288mg PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 8.2e-56
Identity = 125/186 (67.20%), Postives = 147/186 (79.03%), Query Frame = 1


Query: 10  TSALSPLSSCSSLYEPDNELKHMQLASSCL-KNKKRLSKQLSMCETPRELAWEKRRRRML 69
           +S+ SP SS  +  + + EL+ M LA + L KNKKRLSKQLSMCETPR++AWEKRRR+ML
Sbjct: 15  SSSSSPPSSMLTSSDTE-ELRRMPLAPTSLNKNKKRLSKQLSMCETPRDIAWEKRRRQML 74

Query: 70  RP---RNG-SSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQL 129
           R    +NG   +D+D LTDED +ELKGCIELGF FNEE+G +LC TLPALDLYFAVNRQL
Sbjct: 75  RQERRKNGIHDSDQDLLTDEDLHELKGCIELGFGFNEEEGQQLCNTLPALDLYFAVNRQL 134

Query: 130 SPSPVSTPHSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVA 189
           S SPVSTP S  ST  SSLGGR SS  SPR D + W++C+PG +P+QVK KLRHWAQAVA
Sbjct: 135 STSPVSTPQSRAST--SSLGGRSSSFGSPRSDSDAWKICNPGDNPQQVKTKLRHWAQAVA 194

Query: 190 CSVMQS 191
           CSVMQS
Sbjct: 195 CSVMQS 197

[Close]

BLAST of Cp4.1LG04g01940 vs. TAIR10
Match: AT1G08790.1 (AT1G08790.1 Protein of unknown function (DUF1685))

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-46
Identity = 113/188 (60.11%), Postives = 131/188 (69.68%), Query Frame = 1


Query: 8   RITSALS-PLSSCSSLYEPD-NELKHMQLASSCLKNKKRLSKQLSMCETPRELAWEKRRR 67
           R+  ALS   SS SS Y+ +  EL+ M L     K KKRLSKQLSM ET R++AWE+RRR
Sbjct: 3   RVGEALSVSTSSSSSFYDSEVEELQKMPLEPPKAKAKKRLSKQLSMLETRRDIAWERRRR 62

Query: 68  RMLRPRNGSSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLS 127
           +ML      +   DDLTDED +ELKG IELGF FNEE G  L  TLPALDLYFAV RQ+ 
Sbjct: 63  QMLHHLEKHNEGGDDLTDEDLSELKGSIELGFGFNEEQGQHLTTTLPALDLYFAVTRQI- 122

Query: 128 PSPVSTPHSSTSTSSS---SLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQA 187
            SPVSTP S  S+SSS   SLG R SS  SP  D ++ +V SPG DP+QVK +LRHWAQA
Sbjct: 123 -SPVSTPGSGGSSSSSRPTSLGDRSSSFGSPISDSDSLKVMSPGDDPQQVKTRLRHWAQA 182

Query: 188 VACSVMQS 191
           VACSV+QS
Sbjct: 183 VACSVIQS 188

[Close]

BLAST of Cp4.1LG04g01940 vs. TAIR10
Match: AT5G28690.1 (AT5G28690.1 Protein of unknown function (DUF1685))

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-41
Identity = 96/160 (60.00%), Postives = 116/160 (72.50%), Query Frame = 1


Query: 40  KNKKRLSKQLSMCETPRELAWEKRRRRMLR-----PRNGSSTDRD--DLTDEDWNELKGC 99
           K K+RLSKQLSM ETPR++AWEKRRR+ML+      ++ S  D D  DLTDED  ELKG 
Sbjct: 33  KPKQRLSKQLSMRETPRDVAWEKRRRQMLKIQEKKQKSVSENDNDSPDLTDEDLRELKGS 92

Query: 100 IELGFAFNEEDGHKLCGTLPALDLYFAVNRQLS--PSPVSTPHSSTSTSSSSLGGRGSSC 159
           IELGF F+EE G KLC TLPALDLYFAVNRQLS  PSP S+     S SS+S+      C
Sbjct: 93  IELGFGFSEEAGQKLCNTLPALDLYFAVNRQLSPLPSPSSSNGGDGSLSSTSVSSSSIPC 152

Query: 160 ESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 191
            SP+ D ++ ++  PG +P+QVK +LRHWAQAVACS+MQS
Sbjct: 153 -SPKTDSDSLKILCPGDNPQQVKQRLRHWAQAVACSLMQS 191

[Close]

BLAST of Cp4.1LG04g01940 vs. TAIR10
Match: AT3G04700.1 (AT3G04700.1 Protein of unknown function (DUF1685))

HSP 1 Score: 166.0 bits (419), Expect = 2.3e-41
Identity = 93/160 (58.13%), Postives = 115/160 (71.88%), Query Frame = 1


Query: 40  KNKKRLSKQLSMCETPRELAWEKRRRRMLRPRN------GSSTD---RDDLTDEDWNELK 99
           K K RLSKQLSMCETPR++AWE+RRR+M+  +       G+S +   + +LTDED NELK
Sbjct: 32  KPKHRLSKQLSMCETPRDVAWERRRRQMIMIQEKKLLHKGASDNLCIQANLTDEDLNELK 91

Query: 100 GCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSTSSSSLGGRGSSC 159
           G IELGF FNEE G KLC TLPALDLYFAVNRQLSP P S   S +S++S+S       C
Sbjct: 92  GSIELGFGFNEEAGQKLCNTLPALDLYFAVNRQLSPLP-SPSSSRSSSASASTFSYSIPC 151

Query: 160 ESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 191
              + D ++ ++  PG DP+Q+K +LRHWAQAVACSVMQS
Sbjct: 152 SPKKTDSDSVKILCPGDDPQQMKQRLRHWAQAVACSVMQS 190

[Close]

BLAST of Cp4.1LG04g01940 vs. TAIR10
Match: AT2G43340.1 (AT2G43340.1 Protein of unknown function (DUF1685))

HSP 1 Score: 87.8 bits (216), Expect = 7.9e-18
Identity = 62/180 (34.44%), Postives = 91/180 (50.56%), Query Frame = 1


Query: 14  SPLSSCSSLYEPDNELKHMQLASSCLKNKKRLSKQLSMCETPRELAWEKRRRRMLRPRNG 73
           S  SSCS     + E+ +        K  K+L K              K+   +L     
Sbjct: 26  SSFSSCSYSESEEEEINNGFGVVQSKKQTKKLEK--------------KKSNVLLEGYVV 85

Query: 74  SSTDRDDL------TDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPS 133
            S   DDL      TD+D  ELKGC++LGF FN E+  +LC TLPAL+L ++++++    
Sbjct: 86  DSAVNDDLKRTKSLTDDDLEELKGCVDLGFGFNYEEIPELCNTLPALELCYSMSQKF--- 145

Query: 134 PVSTPHSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSV 188
            +   H   S+SS     + S  +SP     +W++ SPG +P  VKA+L+ WAQAVAC+V
Sbjct: 146 -IDQDHHHHSSSSPEK--KSSVLDSPVSPIASWKISSPGDNPDDVKARLKFWAQAVACTV 185

[Close]

BLAST of Cp4.1LG04g01940 vs. TAIR10
Match: AT2G31560.1 (AT2G31560.1 Protein of unknown function (DUF1685))

HSP 1 Score: 84.7 bits (208), Expect = 6.7e-17
Identity = 45/117 (38.46%), Postives = 67/117 (57.26%), Query Frame = 1


Query: 77  DRDDL------TDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVS 136
           D+DDL      TD+D  ELKGC++LGF F+ ++  +LC TLPAL+L ++++++       
Sbjct: 88  DQDDLTRAKSLTDDDLEELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFLDDKQQ 147

Query: 137 TPHSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSV 188
             H S     S      S   +       W++ SPG DP  VKA+L++WAQ VAC+V
Sbjct: 148 NHHKSQEEDDS------SPPPTTTAPIANWKISSPGDDPDDVKARLKYWAQTVACTV 198

[Close]

BLAST of Cp4.1LG04g01940 vs. NCBI nr
Match: gi|659125483|ref|XP_008462705.1| (PREDICTED: uncharacterized protein LOC103501007 [Cucumis melo])

HSP 1 Score: 315.5 bits (807), Expect = 6.6e-83
Identity = 163/194 (84.02%), Postives = 173/194 (89.18%), Query Frame = 1


Query: 1   MDNKRLKRITSALSPLSSCSSLYEPDNELKHMQLASSCLKNKKRLSKQLSMCETPRELAW 60
           MD K L+R+ S+LS  SSC SL+E D+ELKHM LA   LKNKKRLSKQLSMCETPR+LAW
Sbjct: 1   MDKKHLQRMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAW 60

Query: 61  EKRRRRMLRPRNGSSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 120
           EKRRR+MLRPRNG STDRDDLTDEDWNELKGCIELGFAFNEE GHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRNG-STDRDDLTDEDWNELKGCIELGFAFNEEYGHKLCGTLPALDLYFAV 120

Query: 121 NRQLSPSPVSTPHSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWA 180
           NRQLSPSPVSTP SS ST  SSLGGR SS ESPR + +TWRVCSPG+DPKQVKAKLRHWA
Sbjct: 121 NRQLSPSPVSTPQSSAST--SSLGGRSSSFESPRSEFDTWRVCSPGEDPKQVKAKLRHWA 180

Query: 181 QAVACSVMQSLGEK 195
           QAVACSVMQSLGEK
Sbjct: 181 QAVACSVMQSLGEK 191

[Close]

BLAST of Cp4.1LG04g01940 vs. NCBI nr
Match: gi|449449555|ref|XP_004142530.1| (PREDICTED: uncharacterized protein LOC101212719 [Cucumis sativus])

HSP 1 Score: 310.5 bits (794), Expect = 2.1e-81
Identity = 161/194 (82.99%), Postives = 173/194 (89.18%), Query Frame = 1


Query: 1   MDNKRLKRITSALSPLSSCSSLYEPDNELKHMQLASSCLKNKKRLSKQLSMCETPRELAW 60
           MD K L+R+ S+LS  SSC SL+E ++ELKHM LA   LKNKKRLSKQLSMCETPR+LAW
Sbjct: 1   MDKKHLQRVPSSLSSSSSCPSLHESEDELKHMPLAPPQLKNKKRLSKQLSMCETPRDLAW 60

Query: 61  EKRRRRMLRPRNGSSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 120
           EKRRR+MLRPRNG STDRDDLTDEDWNELKG IELGFAFNEE GHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRNG-STDRDDLTDEDWNELKGFIELGFAFNEEYGHKLCGTLPALDLYFAV 120

Query: 121 NRQLSPSPVSTPHSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWA 180
           NRQLSPSPVSTP SS S +SSSLGGR SS ESPR + +TWRVCSPG+DPKQVKAKLRHWA
Sbjct: 121 NRQLSPSPVSTPQSSAS-ASSSLGGRSSSFESPRSELDTWRVCSPGEDPKQVKAKLRHWA 180

Query: 181 QAVACSVMQSLGEK 195
           QAVACSVMQSLGEK
Sbjct: 181 QAVACSVMQSLGEK 192

[Close]

BLAST of Cp4.1LG04g01940 vs. NCBI nr
Match: gi|1009117682|ref|XP_015875448.1| (PREDICTED: uncharacterized protein LOC107412235 [Ziziphus jujuba])

HSP 1 Score: 233.8 bits (595), Expect = 2.5e-58
Identity = 121/176 (68.75%), Postives = 141/176 (80.11%), Query Frame = 1


Query: 17  SSCSSLYEPDNELKHMQLASSCLKNKKRLSKQLSMCETPRELAWEKRRRRMLRP--RNGS 76
           S  SS  + + EL+HM LA   LK+ KRLSKQLSMCETPR++AWE+RRR++LR   R   
Sbjct: 21  SQSSSNLDSEEELQHMPLAPPRLKSHKRLSKQLSMCETPRDIAWERRRRQILRQERRKRG 80

Query: 77  STDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHS 136
            +D DDLTDED +ELKGCIELGF FNEEDG +LC TLPALDLYFAVNRQ+SPSPVSTP S
Sbjct: 81  ISDSDDLTDEDLHELKGCIELGFGFNEEDGQRLCSTLPALDLYFAVNRQISPSPVSTPQS 140

Query: 137 STSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 191
             ST  SSLG R SS ESP+ + E+W++CSPG DP+QVK KLRHWAQAVACS+MQS
Sbjct: 141 RKST--SSLGERSSSFESPKSESESWKICSPGDDPQQVKTKLRHWAQAVACSLMQS 194

[Close]

BLAST of Cp4.1LG04g01940 vs. NCBI nr
Match: gi|965608470|dbj|BAT94961.1| (hypothetical protein VIGAN_08161300 [Vigna angularis var. angularis])

HSP 1 Score: 232.6 bits (592), Expect = 5.7e-58
Identity = 124/178 (69.66%), Postives = 139/178 (78.09%), Query Frame = 1


Query: 13  LSPLSSCSSLYEPDNELKHMQLASSCLKNKKRLSKQLSMCETPRELAWEKRRRRMLRPRN 72
           LS  SS SS  E D EL+HM LA    K+KKRLSKQLSMCE PR++AWE+RR   ++ R 
Sbjct: 23  LSSSSSSSSPSESDEELQHMLLAPPLWKDKKRLSKQLSMCEKPRDIAWERRR---MQERR 82

Query: 73  GSSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTP 132
            SST  DDLTDED NELKGCIELGF FNEEDG +LC TLPALDLYFAVNR+LSPSPVSTP
Sbjct: 83  RSSTVCDDLTDEDLNELKGCIELGFGFNEEDGQRLCNTLPALDLYFAVNRRLSPSPVSTP 142

Query: 133 HSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 191
            S     +SSLGGR SS  SPR D ++W++CSPG DP+ VK KLRHWAQAVACSVMQS
Sbjct: 143 QS----RASSLGGRSSSFGSPRSDSDSWKICSPGDDPEHVKTKLRHWAQAVACSVMQS 193

[Close]

BLAST of Cp4.1LG04g01940 vs. NCBI nr
Match: gi|951018570|ref|XP_014511842.1| (PREDICTED: uncharacterized protein LOC106770554 [Vigna radiata var. radiata])

HSP 1 Score: 232.3 bits (591), Expect = 7.4e-58
Identity = 123/178 (69.10%), Postives = 139/178 (78.09%), Query Frame = 1


Query: 13  LSPLSSCSSLYEPDNELKHMQLASSCLKNKKRLSKQLSMCETPRELAWEKRRRRMLRPRN 72
           LS  SS SS  + D EL+HM LA    K+KKRLSKQLSMCE PR++AWE+RR   ++ R 
Sbjct: 26  LSSSSSSSSPSDSDEELQHMSLAPPLWKDKKRLSKQLSMCEKPRDIAWERRR---MQERR 85

Query: 73  GSSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTP 132
            SST  DDLTDED NELKGCIELGF FNEEDG +LC TLPALDLYFAVNR+LSPSPVSTP
Sbjct: 86  RSSTVCDDLTDEDLNELKGCIELGFGFNEEDGQRLCNTLPALDLYFAVNRRLSPSPVSTP 145

Query: 133 HSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 191
            S     +SSLGGR SS  SPR D ++W++CSPG DP+ VK KLRHWAQAVACSVMQS
Sbjct: 146 QS----RASSLGGRSSSFGSPRSDSDSWKICSPGDDPEHVKTKLRHWAQAVACSVMQS 196

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g01940 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g01940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY38_CUCSA	1.5e-81	82.99	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690230 PE=4 SV=1	[more]
A0A0S3SQ61_PHAAN	3.9e-58	69.66	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G161300 PE=...	[more]
V7BG30_PHAVU	1.3e-56	67.22	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G188200g PE=4 SV=1	[more]
M5W1A3_PRUPE	2.2e-56	64.43	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016189mg PE=4 SV=1	[more]
V4SEL2_9ROSI	8.2e-56	67.20	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030288mg PE=4 SV=1	[more]

BLAST of Cp4.1LG04g01940 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08790.1	1.1e-46	60.11	Protein of unknown function (DUF1685)	[more]
AT5G28690.1	1.3e-41	60.00	Protein of unknown function (DUF1685)	[more]
AT3G04700.1	2.3e-41	58.13	Protein of unknown function (DUF1685)	[more]
AT2G43340.1	7.9e-18	34.44	Protein of unknown function (DUF1685)	[more]
AT2G31560.1	6.7e-17	38.46	Protein of unknown function (DUF1685)	[more]

BLAST of Cp4.1LG04g01940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659125483\|ref\|XP_008462705.1\|	6.6e-83	84.02	PREDICTED: uncharacterized protein LOC103501007 [Cucumis melo]	[more]
gi\|449449555\|ref\|XP_004142530.1\|	2.1e-81	82.99	PREDICTED: uncharacterized protein LOC101212719 [Cucumis sativus]	[more]
gi\|1009117682\|ref\|XP_015875448.1\|	2.5e-58	68.75	PREDICTED: uncharacterized protein LOC107412235 [Ziziphus jujuba]	[more]
gi\|965608470\|dbj\|BAT94961.1\|	5.7e-58	69.66	hypothetical protein VIGAN_08161300 [Vigna angularis var. angularis]	[more]
gi\|951018570\|ref\|XP_014511842.1\|	7.4e-58	69.10	PREDICTED: uncharacterized protein LOC106770554 [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012881	DUF1685

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g01940.1	Cp4.1LG04g01940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 81..138 score: 4.3
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 27..193 score: 2.9
None	No IPR available	PANTHER	PTHR31865:SF3	F22O13.28	coord: 27..193 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g01940	Cucsa.291630	Cucumber (Gy14) v1	cgycpeB0771
Cp4.1LG04g01940	CmaCh10G010140	Cucurbita maxima (Rimu)	cmacpeB095
Cp4.1LG04g01940	CmaCh11G009770	Cucurbita maxima (Rimu)	cmacpeB147
Cp4.1LG04g01940	CmoCh11G009970	Cucurbita moschata (Rifu)	cmocpeB127
Cp4.1LG04g01940	Csa1G690230	Cucumber (Chinese Long) v2	cpecuB639
Cp4.1LG04g01940	MELO3C024658	Melon (DHL92) v3.5.1	cpemeB617
Cp4.1LG04g01940	ClCG06G009260	Watermelon (Charleston Gray)	cpewcgB620
Cp4.1LG04g01940	CSPI01G33540	Wild cucumber (PI 183967)	cpecpiB644
Cp4.1LG04g01940	Lsi06G007900	Bottle gourd (USVL1VR-Ls)	cpelsiB559
Cp4.1LG04g01940	MELO3C024658.2	Melon (DHL92) v3.6.1	cpemedB729
Cp4.1LG04g01940	CsaV3_1G045510	Cucumber (Chinese Long) v3	cpecucB0799
Cp4.1LG04g01940	Bhi02G001036	Wax gourd	cpewgoB0899
Cp4.1LG04g01940	CsGy1G032180	Cucumber (Gy14) v2	cgybcpeB112
Cp4.1LG04g01940	Carg16477	Silver-seed gourd	carcpeB1261

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG04g01940	Cp4.1LG05g08410	Cucurbita pepo (Zucchini)	cpecpeB494

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g01940	Cucurbita pepo (Zucchini)	cpecpeB504
Cp4.1LG04g01940	Cucurbita moschata (Rifu)	cmocpeB071