Carg16477 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16477
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF1685 family protein
Location	Cucurbita_argyrosperma_scaffold_130 : 882172 .. 883007 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGTCCCCAGTCCCGACCCGGCCCTCTCCTCGTAAGCGCGGTTGGCGGGTTATCACTAGCCGCCACCGTCCCCAATCCCGACCCGGCCCTCTCCTCGTAAGCGCGGTTGGCGGGTTATCACTAGCCGCCACCGCCGAACTCCTAATGGACAACAAACGCTTAAAAAGAATCACATCAGCTCTATCGCCATTATCATCATGTTCGTCACTCTACGAGCAAGATAACGAGCTAAAACACATGCAATTAGCATCATCATGTTTAAAAAACAAGAAACGTTTATCAAAACAACTTTCAATGTGCGAAACACCAAGAGATCTCGCATGGGAGAAACGACGACGACAAATGCTCCGACCTAGAAACGGTGGCTCGACCGATAGAGATGACTTAACAGACGAAGATTGGAATGAGCTAAAAGGGTGTATCGAATTAGGGTTTGCATTCAACGAGGAAGACGGACATAAGTTGTGTGGTACATTACCAGCTCTTGACTTATACTTCGCCGTGAATCGACAACTCTCGCCGAGTCCAGTGTCGACGCCGCATAGTAGCACATCGACGTCGTCGTCGCTCGGGGGACGAGGTTCATCGTGTGAGAGCCCGAGGGGTGATTGTGAAACATGGAGGGTTTGCAGCCCAGGTAAGAAGAGATTTGAGATTGTTTATAGTGAATTAAAGGAATTAATAAAAAGGTGTAATTTTGATGAATTTGTTCAGGGCAAGATCCGAAGCAAGTGAAGGCTAAATTAAGACATTGGGCTCAAGCAGTGGCATGTTCGGTAATGCAATCATTGGGAGAAAAATAAAAAGGGAATAATGACGTGTACAGAACAGAAGAG

mRNA sequence

CCGTCCCCAGTCCCGACCCGGCCCTCTCCTCGTAAGCGCGGTTGGCGGGTTATCACTAGCCGCCACCGTCCCCAATCCCGACCCGGCCCTCTCCTCGTAAGCGCGGTTGGCGGGTTATCACTAGCCGCCACCGCCGAACTCCTAATGGACAACAAACGCTTAAAAAGAATCACATCAGCTCTATCGCCATTATCATCATGTTCGTCACTCTACGAGCAAGATAACGAGCTAAAACACATGCAATTAGCATCATCATGTTTAAAAAACAAGAAACGTTTATCAAAACAACTTTCAATGTGCGAAACACCAAGAGATCTCGCATGGGAGAAACGACGACGACAAATGCTCCGACCTAGAAACGGTGGCTCGACCGATAGAGATGACTTAACAGACGAAGATTGGAATGAGCTAAAAGGGTGTATCGAATTAGGGTTTGCATTCAACGAGGAAGACGGACATAAGTTGTGTGGTACATTACCAGCTCTTGACTTATACTTCGCCGTGAATCGACAACTCTCGCCGAGTCCAGTGTCGACGCCGCATAGTAGCACATCGACGTCGTCGTCGCTCGGGGGACGAGGTTCATCGTGTGAGAGCCCGAGGGGTGATTGTGAAACATGGAGGGTTTGCAGCCCAGGGCAAGATCCGAAGCAAGTGAAGGCTAAATTAAGACATTGGGCTCAAGCAGTGGCATGTTCGGTAATGCAATCATTGGGAGAAAAATAAAAAGGGAATAATGACGTGTACAGAACAGAAGAG

Coding sequence (CDS)

CCGTCCCCAGTCCCGACCCGGCCCTCTCCTCGTAAGCGCGGTTGGCGGGTTATCACTAGCCGCCACCGTCCCCAATCCCGACCCGGCCCTCTCCTCGTAAGCGCGGTTGGCGGGTTATCACTAGCCGCCACCGCCGAACTCCTAATGGACAACAAACGCTTAAAAAGAATCACATCAGCTCTATCGCCATTATCATCATGTTCGTCACTCTACGAGCAAGATAACGAGCTAAAACACATGCAATTAGCATCATCATGTTTAAAAAACAAGAAACGTTTATCAAAACAACTTTCAATGTGCGAAACACCAAGAGATCTCGCATGGGAGAAACGACGACGACAAATGCTCCGACCTAGAAACGGTGGCTCGACCGATAGAGATGACTTAACAGACGAAGATTGGAATGAGCTAAAAGGGTGTATCGAATTAGGGTTTGCATTCAACGAGGAAGACGGACATAAGTTGTGTGGTACATTACCAGCTCTTGACTTATACTTCGCCGTGAATCGACAACTCTCGCCGAGTCCAGTGTCGACGCCGCATAGTAGCACATCGACGTCGTCGTCGCTCGGGGGACGAGGTTCATCGTGTGAGAGCCCGAGGGGTGATTGTGAAACATGGAGGGTTTGCAGCCCAGGGCAAGATCCGAAGCAAGTGAAGGCTAAATTAAGACATTGGGCTCAAGCAGTGGCATGTTCGGTAATGCAATCATTGGGAGAAAAATAA

Protein sequence

PSPVPTRPSPRKRGWRVITSRHRPQSRPGPLLVSAVGGLSLAATAELLMDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQSLGEK

Homology

[Close]

BLAST of Carg16477 vs. NCBI nr
Match: XP_022933583.1 (uncharacterized protein LOC111440967 [Cucurbita moschata])

HSP 1 Score: 392.5 bits (1007), Expect = 1.0e-105
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 49  MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 108
           MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 60

Query: 109 EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 168
           EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 120

Query: 169 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 228
           NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ
Sbjct: 121 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 180

Query: 229 AVACSVMQSLGEK 242
           AVACSVMQSLGEK
Sbjct: 181 AVACSVMQSLGEK 193

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BLAST of Carg16477 vs. NCBI nr
Match: XP_023531903.1 (uncharacterized protein LOC111794029 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.2 bits (975), Expect = 5.3e-102
Identity = 189/194 (97.42%), Postives = 191/194 (98.45%), Query Frame = 0


Query: 49  MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 108
           MDNKRLKRITSALSPLSSCSSLYE DNELKHMQLASSCLKNKKRLSKQLSMCETPR+LAW
Sbjct: 1   MDNKRLKRITSALSPLSSCSSLYEPDNELKHMQLASSCLKNKKRLSKQLSMCETPRELAW 60

Query: 109 EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 168
           EKRRR+MLRPRNG STDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRRMLRPRNGSSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 120

Query: 169 NRQLSPSPVSTPHSSTST-SSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWA 228
           NRQLSPSPVSTPHSSTST SSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWA
Sbjct: 121 NRQLSPSPVSTPHSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWA 180

Query: 229 QAVACSVMQSLGEK 242
           QAVACSVMQSLGEK
Sbjct: 181 QAVACSVMQSLGEK 194

[Close]

BLAST of Carg16477 vs. NCBI nr
Match: XP_022965570.1 (uncharacterized protein LOC111465428 [Cucurbita maxima])

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 178/194 (91.75%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 49  MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 108
           MD K LKRITSALSPLSSCSSLYE DNELKH+QLASSCLKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLKRITSALSPLSSCSSLYELDNELKHIQLASSCLKNKKRLSKQLSMCETPRDLAW 60

Query: 109 EK-RRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFA 168
           EK RRRQMLRP+N GSTD+DDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFA
Sbjct: 61  EKRRRRQMLRPKNSGSTDKDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFA 120

Query: 169 VNRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWA 228
           VNRQL PSPVS  HSS S+SSSLG R SSCESPRGDC+TWRVCSPGQDPKQVKAKLRHWA
Sbjct: 121 VNRQLLPSPVSMLHSSKSSSSSLGERSSSCESPRGDCDTWRVCSPGQDPKQVKAKLRHWA 180

Query: 229 QAVACSVMQSLGEK 242
           QAVACSVMQSLGEK
Sbjct: 181 QAVACSVMQSLGEK 194

[Close]

BLAST of Carg16477 vs. NCBI nr
Match: XP_008462705.1 (PREDICTED: uncharacterized protein LOC103501007 [Cucumis melo])

HSP 1 Score: 320.1 bits (819), Expect = 6.5e-84
Identity = 165/193 (85.49%), Postives = 173/193 (89.64%), Query Frame = 0


Query: 49  MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 108
           MD K L+R+ S+LS  SSC SL+E D+ELKHM LA   LKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLQRMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAW 60

Query: 109 EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 168
           EKRRRQMLRPRN GSTDRDDLTDEDWNELKGCIELGFAFNEE GHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRN-GSTDRDDLTDEDWNELKGCIELGFAFNEEYGHKLCGTLPALDLYFAV 120

Query: 169 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 228
           NRQLSPSPVSTP SS ST SSLGGR SS ESPR + +TWRVCSPG+DPKQVKAKLRHWAQ
Sbjct: 121 NRQLSPSPVSTPQSSAST-SSLGGRSSSFESPRSEFDTWRVCSPGEDPKQVKAKLRHWAQ 180

Query: 229 AVACSVMQSLGEK 242
           AVACSVMQSLGEK
Sbjct: 181 AVACSVMQSLGEK 191

[Close]

BLAST of Carg16477 vs. NCBI nr
Match: XP_004142530.1 (PREDICTED: uncharacterized protein LOC101212719 [Cucumis sativus] >KGN66785.1 hypothetical protein Csa_1G690230 [Cucumis sativus])

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 163/193 (84.46%), Postives = 172/193 (89.12%), Query Frame = 0


Query: 49  MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 108
           MD K L+R+ S+LS  SSC SL+E ++ELKHM LA   LKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLQRVPSSLSSSSSCPSLHESEDELKHMPLAPPQLKNKKRLSKQLSMCETPRDLAW 60

Query: 109 EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 168
           EKRRRQMLRPRN GSTDRDDLTDEDWNELKG IELGFAFNEE GHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRN-GSTDRDDLTDEDWNELKGFIELGFAFNEEYGHKLCGTLPALDLYFAV 120

Query: 169 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 228
           NRQLSPSPVSTP SS S SSSLGGR SS ESPR + +TWRVCSPG+DPKQVKAKLRHWAQ
Sbjct: 121 NRQLSPSPVSTPQSSASASSSLGGRSSSFESPRSELDTWRVCSPGEDPKQVKAKLRHWAQ 180

Query: 229 AVACSVMQSLGEK 242
           AVACSVMQSLGEK
Sbjct: 181 AVACSVMQSLGEK 192

[Close]

BLAST of Carg16477 vs. TAIR10
Match: AT1G08790.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 185.7 bits (470), Expect = 3.5e-47
Identity = 114/188 (60.64%), Postives = 130/188 (69.15%), Query Frame = 0


Query: 56  RITSALS-PLSSCSSLYEQD-NELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRR 115
           R+  ALS   SS SS Y+ +  EL+ M L     K KKRLSKQLSM ET RD+AWE+RRR
Sbjct: 3   RVGEALSVSTSSSSSFYDSEVEELQKMPLEPPKAKAKKRLSKQLSMLETRRDIAWERRRR 62

Query: 116 QMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLS 175
           QML      +   DDLTDED +ELKG IELGF FNEE G  L  TLPALDLYFAV RQ+ 
Sbjct: 63  QMLHHLEKHNEGGDDLTDEDLSELKGSIELGFGFNEEQGQHLTTTLPALDLYFAVTRQI- 122

Query: 176 PSPVSTPHSSTSTSS----SLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQA 235
            SPVSTP S  S+SS    SLG R SS  SP  D ++ +V SPG DP+QVK +LRHWAQA
Sbjct: 123 -SPVSTPGSGGSSSSSRPTSLGDRSSSFGSPISDSDSLKVMSPGDDPQQVKTRLRHWAQA 182

Query: 236 VACSVMQS 238
           VACSV+QS
Sbjct: 183 VACSVIQS 188

[Close]

BLAST of Carg16477 vs. TAIR10
Match: AT3G04700.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 157.1 bits (396), Expect = 1.3e-38
Identity = 88/159 (55.35%), Postives = 105/159 (66.04%), Query Frame = 0


Query: 88  KNKKRLSKQLSMCETPRDLAWEKRRRQML-----RPRNGGSTD----RDDLTDEDWNELK 147
           K K RLSKQLSMCETPRD+AWE+RRRQM+     +  + G++D    + +LTDED NELK
Sbjct: 32  KPKHRLSKQLSMCETPRDVAWERRRRQMIMIQEKKLLHKGASDNLCIQANLTDEDLNELK 91

Query: 148 GCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSTSSSLGGRGSSCE 207
           G IELGF FNEE G KLC TLPALDLYFAVNRQLSP                        
Sbjct: 92  GSIELGFGFNEEAGQKLCNTLPALDLYFAVNRQLSPLXXXXXXXXXXXXXXXXXXXXXXS 151

Query: 208 SPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 238
             + D ++ ++  PG DP+Q+K +LRHWAQAVACSVMQS
Sbjct: 152 PKKTDSDSVKILCPGDDPQQMKQRLRHWAQAVACSVMQS 190

[Close]

BLAST of Carg16477 vs. TAIR10
Match: AT5G28690.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 153.7 bits (387), Expect = 1.5e-37
Identity = 88/159 (55.35%), Postives = 103/159 (64.78%), Query Frame = 0


Query: 88  KNKKRLSKQLSMCETPRDLAWEKRRRQMLRPR-------NGGSTDRDDLTDEDWNELKGC 147
           K K+RLSKQLSM ETPRD+AWEKRRRQML+ +       +    D  DLTDED  ELKG 
Sbjct: 33  KPKQRLSKQLSMRETPRDVAWEKRRRQMLKIQEKKQKSVSENDNDSPDLTDEDLRELKGS 92

Query: 148 IELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSTSSSLGGRGSSCE-- 207
           IELGF F+EE G KLC TLPALDLYFAVNRQLSP                          
Sbjct: 93  IELGFGFSEEAGQKLCNTLPALDLYFAVNRQLSPLXXXXXXXXXXXXXXXXXXXXXXXPC 152

Query: 208 SPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 238
           SP+ D ++ ++  PG +P+QVK +LRHWAQAVACS+MQS
Sbjct: 153 SPKTDSDSLKILCPGDNPQQVKQRLRHWAQAVACSLMQS 191

[Close]

BLAST of Carg16477 vs. TAIR10
Match: AT4G33985.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 84.7 bits (208), Expect = 8.3e-17
Identity = 57/143 (39.86%), Postives = 77/143 (53.85%), Query Frame = 0


Query: 101 ETPRDLAWEKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEED---GHKLCG 160
           +  R+ AW +++ +    R G S     +TDED  ELKGCIELGF F  +      +L  
Sbjct: 24  DADREEAWLRKKGKQSLGRLGRS---KSVTDEDLEELKGCIELGFGFEPDSPDLDPRLSE 83

Query: 161 TLPALDLYFAVNRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPK 220
           TLPAL LY AVN+Q      S+  S TS+ SS+   G +  S      +  +   G DP+
Sbjct: 84  TLPALGLYCAVNKQ-----YSSRLSRTSSLSSIASEGENSNS------STTIVDQGDDPE 143

Query: 221 QVKAKLRHWAQAVACSVMQSLGE 241
            +K +L+ WAQ VACSV Q  GE
Sbjct: 144 TMKLRLKQWAQVVACSVKQFSGE 152

[Close]

BLAST of Carg16477 vs. TAIR10
Match: AT2G43340.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 82.4 bits (202), Expect = 4.1e-16
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 129 LTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSTSS 188
           LTD+D  ELKGC++LGF FN E+  +LC TLPAL+L ++++++                 
Sbjct: 85  LTDDDLEELKGCVDLGFGFNYEEIPELCNTLPALELCYSMSQKFIDQ-----XXXXXXXX 144

Query: 189 SLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSV 235
                    +SP     +W++ SPG +P  VKA+L+ WAQAVAC+V
Sbjct: 145 XXXXXXXVLDSPVSPIASWKISSPGDNPDDVKARLKFWAQAVACTV 185

[Close]

BLAST of Carg16477 vs. TrEMBL
Match: tr|A0A1S3CHL5|A0A1S3CHL5_CUCME (uncharacterized protein LOC103501007 OS=Cucumis melo OX=3656 GN=LOC103501007 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 4.3e-84
Identity = 165/193 (85.49%), Postives = 173/193 (89.64%), Query Frame = 0


Query: 49  MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 108
           MD K L+R+ S+LS  SSC SL+E D+ELKHM LA   LKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLQRMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAW 60

Query: 109 EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 168
           EKRRRQMLRPRN GSTDRDDLTDEDWNELKGCIELGFAFNEE GHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRN-GSTDRDDLTDEDWNELKGCIELGFAFNEEYGHKLCGTLPALDLYFAV 120

Query: 169 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 228
           NRQLSPSPVSTP SS ST SSLGGR SS ESPR + +TWRVCSPG+DPKQVKAKLRHWAQ
Sbjct: 121 NRQLSPSPVSTPQSSAST-SSLGGRSSSFESPRSEFDTWRVCSPGEDPKQVKAKLRHWAQ 180

Query: 229 AVACSVMQSLGEK 242
           AVACSVMQSLGEK
Sbjct: 181 AVACSVMQSLGEK 191

[Close]

BLAST of Carg16477 vs. TrEMBL
Match: tr|A0A0A0LY38|A0A0A0LY38_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690230 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 7.3e-84
Identity = 163/193 (84.46%), Postives = 172/193 (89.12%), Query Frame = 0


Query: 49  MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 108
           MD K L+R+ S+LS  SSC SL+E ++ELKHM LA   LKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLQRVPSSLSSSSSCPSLHESEDELKHMPLAPPQLKNKKRLSKQLSMCETPRDLAW 60

Query: 109 EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 168
           EKRRRQMLRPRN GSTDRDDLTDEDWNELKG IELGFAFNEE GHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRN-GSTDRDDLTDEDWNELKGFIELGFAFNEEYGHKLCGTLPALDLYFAV 120

Query: 169 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 228
           NRQLSPSPVSTP SS S SSSLGGR SS ESPR + +TWRVCSPG+DPKQVKAKLRHWAQ
Sbjct: 121 NRQLSPSPVSTPQSSASASSSLGGRSSSFESPRSELDTWRVCSPGEDPKQVKAKLRHWAQ 180

Query: 229 AVACSVMQSLGEK 242
           AVACSVMQSLGEK
Sbjct: 181 AVACSVMQSLGEK 192

[Close]

BLAST of Carg16477 vs. TrEMBL
Match: tr|M5W1A3|M5W1A3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G344900 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.1e-58
Identity = 124/183 (67.76%), Postives = 142/183 (77.60%), Query Frame = 0


Query: 63  PLSSCSSL----YEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRP 122
           P S  SSL       + EL+HM LA   + N+KRLSKQLSMCETPRD+AWEKRRRQ+LR 
Sbjct: 9   PTSYSSSLXXXXXXSEEELQHMPLAPPKMLNRKRLSKQLSMCETPRDIAWEKRRRQILRQ 68

Query: 123 --RNGGSTDRDD--LTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSP 182
             R  G  D DD  LTDED +ELKGCIELGF FNEE+G +LC TLPALDLYFAVNRQ SP
Sbjct: 69  ERRRNGINDSDDMVLTDEDLHELKGCIELGFGFNEEEGQRLCPTLPALDLYFAVNRQFSP 128

Query: 183 SPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSV 238
           SPVSTP+S+  ++SSLGGR SS  SPR D + W++CSPG +P+QVK KLRHWAQAVACSV
Sbjct: 129 SPVSTPNSARHSTSSLGGRSSSFGSPRSDTDAWKICSPGDNPQQVKTKLRHWAQAVACSV 188

[Close]

BLAST of Carg16477 vs. TrEMBL
Match: tr|A0A2H5PUF6|A0A2H5PUF6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_168500 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.2e-56
Identity = 122/167 (73.05%), Postives = 137/167 (82.04%), Query Frame = 0


Query: 76  ELKHMQLASSCL-KNKKRLSKQLSMCETPRDLAWEKRRRQMLRP---RNG-GSTDRDDLT 135
           EL+ M LA + L KNKKRLSKQLSMCETPRD+AWEKRRRQMLR    +NG   +D+D LT
Sbjct: 31  ELRRMPLAPTSLNKNKKRLSKQLSMCETPRDIAWEKRRRQMLRQERRKNGIHDSDQDLLT 90

Query: 136 DEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSTSSSL 195
           DED +ELKGCIELGF FNEE+G +LC TLPALDLYFAVNRQLS SPVSTP S  ST SSL
Sbjct: 91  DEDLHELKGCIELGFGFNEEEGQQLCNTLPALDLYFAVNRQLSTSPVSTPQSRAST-SSL 150

Query: 196 GGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 238
           GGR SS  SPR D + W++C+PG +P+QVK KLRHWAQAVACSVMQS
Sbjct: 151 GGRSSSFGSPRSDSDAWKICNPGDNPQQVKTKLRHWAQAVACSVMQS 196

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BLAST of Carg16477 vs. TrEMBL
Match: tr|A0A2N9FTF3|A0A2N9FTF3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18390 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.0e-56
Identity = 119/175 (68.00%), Postives = 134/175 (76.57%), Query Frame = 0


Query: 61  LSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRP-- 120
           +S  SS  SL E + EL+HM LA    K++K LSKQLSMCETPRD+AWEKRRRQ+LR   
Sbjct: 1   MSSSSSSPSLGESEEELQHMPLAPPPWKSRKYLSKQLSMCETPRDIAWEKRRRQILRQGR 60

Query: 121 RNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVS 180
           +     D DD+TDED NELKGCIELGF FNEEDG +LC TLPALDLYFAVNRQLS SPVS
Sbjct: 61  KKNSINDSDDITDEDLNELKGCIELGFGFNEEDGQRLCNTLPALDLYFAVNRQLSTSPVS 120

Query: 181 TPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACS 234
           TP  S   SSSL G  SS ESPR + + W++CSPG DP+QVK KLRHWAQAVACS
Sbjct: 121 TPGGS---SSSLEGHSSSFESPRSESDAWKICSPGDDPQQVKTKLRHWAQAVACS 172

The following BLAST results are available for this feature:

BLAST of Carg16477 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933583.1	1.0e-105	100.00	uncharacterized protein LOC111440967 [Cucurbita moschata]	[more]
XP_023531903.1	5.3e-102	97.42	uncharacterized protein LOC111794029 [Cucurbita pepo subsp. pepo]	[more]
XP_022965570.1	1.1e-94	91.75	uncharacterized protein LOC111465428 [Cucurbita maxima]	[more]
XP_008462705.1	6.5e-84	85.49	PREDICTED: uncharacterized protein LOC103501007 [Cucumis melo]	[more]
XP_004142530.1	1.1e-83	84.46	PREDICTED: uncharacterized protein LOC101212719 [Cucumis sativus] >KGN66785.1 hy...	[more]

BLAST of Carg16477 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08790.1	3.5e-47	60.64	Protein of unknown function (DUF1685)	[more]
AT3G04700.1	1.3e-38	55.35	Protein of unknown function (DUF1685)	[more]
AT5G28690.1	1.5e-37	55.35	Protein of unknown function (DUF1685)	[more]
AT4G33985.1	8.3e-17	39.86	Protein of unknown function (DUF1685)	[more]
AT2G43340.1	4.1e-16	39.62	Protein of unknown function (DUF1685)	[more]

BLAST of Carg16477 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg16477 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CHL5\|A0A1S3CHL5_CUCME	4.3e-84	85.49	uncharacterized protein LOC103501007 OS=Cucumis melo OX=3656 GN=LOC103501007 PE=...	[more]
tr\|A0A0A0LY38\|A0A0A0LY38_CUCSA	7.3e-84	84.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690230 PE=4 SV=1	[more]
tr\|M5W1A3\|M5W1A3_PRUPE	4.1e-58	67.76	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G344900 PE=4 SV=1	[more]
tr\|A0A2H5PUF6\|A0A2H5PUF6_CITUN	2.2e-56	73.05	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_168500 PE=4 SV=1	[more]
tr\|A0A2N9FTF3\|A0A2N9FTF3_FAGSY	5.0e-56	68.00	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18390 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012881	DUF1685

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16477-RA	Carg16477-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 129..186 e-value: 7.1E-23 score: 80.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..204
None	No IPR available	PANTHER	PTHR31865:SF3	F22O13.28	coord: 55..237
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 55..237

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16477	Csa1G690230	Cucumber (Chinese Long) v2	carcuB0927
Carg16477	MELO3C024658	Melon (DHL92) v3.5.1	carmeB0896
Carg16477	CSPI01G33540	Wild cucumber (PI 183967)	carcpiB0948
Carg16477	Cucsa.291630	Cucumber (Gy14) v1	carcgyB1031
Carg16477	CmaCh11G009770	Cucurbita maxima (Rimu)	carcmaB1252
Carg16477	CmaCh10G010140	Cucurbita maxima (Rimu)	carcmaB1251
Carg16477	CmoCh11G009970	Cucurbita moschata (Rifu)	carcmoB1222
Carg16477	Lsi06G007900	Bottle gourd (USVL1VR-Ls)	carlsiB830
Carg16477	Cp4.1LG05g08410	Cucurbita pepo (Zucchini)	carcpeB1262
Carg16477	Cp4.1LG04g01940	Cucurbita pepo (Zucchini)	carcpeB1261
Carg16477	CsGy1G032180	Cucumber (Gy14) v2	carcgybB0899
Carg16477	MELO3C024658.2	Melon (DHL92) v3.6.1	carmedB0904
Carg16477	CsaV3_1G045510	Cucumber (Chinese Long) v3	carcucB0949
Carg16477	Bhi02G001036	Wax gourd	carwgoB1057

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16477	Cucurbita moschata (Rifu)	carcmoB1221
Carg16477	Watermelon (Charleston Gray)	carwcgB0893
Carg16477	Watermelon (97103) v2	carwmbB0958
Carg16477	Wax gourd	carwgoB1056