CmoCh11G009970 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G009970
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Membrane insertase YidC
Location	Cmo_Chr11 : 5354618 .. 5355277 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAACAAACGCTTAAAAAGAATCACATCAGCTCTATCGCCATTATCATCATGTTCATCACTCTACGAGCAAGATAACGAGCTAAAACACATGCAATTAGCATCATCATGTTTAAAAAACAAGAAACGTTTATCAAAACAACTTTCAATGTGCGAAACACCAAGAGATCTCGCATGGGAGAAACGGCGACGACAAATGCTCCGACCTAGAAACGGTGGCTCGACCGATAGAGATGACTTAACAGACGAAGATTGGAATGAGCTAAAAGGGTGTATCGAATTAGGGTTTGCATTCAACGAGGAAGACGGACATAAGTTGTGTGGTACATTACCAGCTCTTGACTTATACTTCGCCGTGAATCGACAACTCTCGCCGAGTCCAGTGTCGACGCCGCATAGTAGCACATCGACGTCGTCGTCGCTCGGGGGACGAGGTTCATCGTGTGAGAGCCCGAGGGGTGATTGTGAAACATGGAGGGTTTGCAGCCCAGGTAAGGAGAGATTTGAGATTGTTTATAATGAAATTAAAAGGAATTGAAAAAAGGTGTAATTTTGATGAATTTGTTCAGGGCAAGATCCGAAGCAAGTGAAGGCAAAATTAAGACATTGGGCTCAAGCAGTGGCATGTTCGGTAATGCAATCATTGGGAGAAAAATAA

mRNA sequence

ATGGACAACAAACGCTTAAAAAGAATCACATCAGCTCTATCGCCATTATCATCATGTTCATCACTCTACGAGCAAGATAACGAGCTAAAACACATGCAATTAGCATCATCATGTTTAAAAAACAAGAAACGTTTATCAAAACAACTTTCAATGTGCGAAACACCAAGAGATCTCGCATGGGAGAAACGGCGACGACAAATGCTCCGACCTAGAAACGGTGGCTCGACCGATAGAGATGACTTAACAGACGAAGATTGGAATGAGCTAAAAGGGTGTATCGAATTAGGGTTTGCATTCAACGAGGAAGACGGACATAAGTTGTGTGGTACATTACCAGCTCTTGACTTATACTTCGCCGTGAATCGACAACTCTCGCCGAGTCCAGTGTCGACGCCGCATAGTAGCACATCGACGTCGTCGTCGCTCGGGGGACGAGGTTCATCGTGTGAGAGCCCGAGGGGTGATTGTGAAACATGGAGGGTTTGCAGCCCAGGGCAAGATCCGAAGCAAGTGAAGGCAAAATTAAGACATTGGGCTCAAGCAGTGGCATGTTCGGTAATGCAATCATTGGGAGAAAAATAA

Coding sequence (CDS)

ATGGACAACAAACGCTTAAAAAGAATCACATCAGCTCTATCGCCATTATCATCATGTTCATCACTCTACGAGCAAGATAACGAGCTAAAACACATGCAATTAGCATCATCATGTTTAAAAAACAAGAAACGTTTATCAAAACAACTTTCAATGTGCGAAACACCAAGAGATCTCGCATGGGAGAAACGGCGACGACAAATGCTCCGACCTAGAAACGGTGGCTCGACCGATAGAGATGACTTAACAGACGAAGATTGGAATGAGCTAAAAGGGTGTATCGAATTAGGGTTTGCATTCAACGAGGAAGACGGACATAAGTTGTGTGGTACATTACCAGCTCTTGACTTATACTTCGCCGTGAATCGACAACTCTCGCCGAGTCCAGTGTCGACGCCGCATAGTAGCACATCGACGTCGTCGTCGCTCGGGGGACGAGGTTCATCGTGTGAGAGCCCGAGGGGTGATTGTGAAACATGGAGGGTTTGCAGCCCAGGGCAAGATCCGAAGCAAGTGAAGGCAAAATTAAGACATTGGGCTCAAGCAGTGGCATGTTCGGTAATGCAATCATTGGGAGAAAAATAA

Homology

[Close]

BLAST of CmoCh11G009970 vs. TrEMBL
Match: A0A0A0LY38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690230 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.2e-84
Identity = 163/193 (84.46%), Postives = 172/193 (89.12%), Query Frame = 1


Query: 1   MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 60
           MD K L+R+ S+LS  SSC SL+E ++ELKHM LA   LKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLQRVPSSLSSSSSCPSLHESEDELKHMPLAPPQLKNKKRLSKQLSMCETPRDLAW 60

Query: 61  EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 120
           EKRRRQMLRPRNG STDRDDLTDEDWNELKG IELGFAFNEE GHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRNG-STDRDDLTDEDWNELKGFIELGFAFNEEYGHKLCGTLPALDLYFAV 120

Query: 121 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 180
           NRQLSPSPVSTP SS S SSSLGGR SS ESPR + +TWRVCSPG+DPKQVKAKLRHWAQ
Sbjct: 121 NRQLSPSPVSTPQSSASASSSLGGRSSSFESPRSELDTWRVCSPGEDPKQVKAKLRHWAQ 180

Query: 181 AVACSVMQSLGEK 194
           AVACSVMQSLGEK
Sbjct: 181 AVACSVMQSLGEK 192

[Close]

BLAST of CmoCh11G009970 vs. TrEMBL
Match: M5W1A3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016189mg PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.6e-59
Identity = 127/193 (65.80%), Postives = 149/193 (77.20%), Query Frame = 1


Query: 1   MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 60
           M +++ +  TS  S LS   SL   + EL+HM LA   + N+KRLSKQLSMCETPRD+AW
Sbjct: 1   MKDEQCRPPTSYSSSLSL--SLSSSEEELQHMPLAPPKMLNRKRLSKQLSMCETPRDIAW 60

Query: 61  EKRRRQMLRP--RNGGSTDRDD--LTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDL 120
           EKRRRQ+LR   R  G  D DD  LTDED +ELKGCIELGF FNEE+G +LC TLPALDL
Sbjct: 61  EKRRRQILRQERRRNGINDSDDMVLTDEDLHELKGCIELGFGFNEEEGQRLCPTLPALDL 120

Query: 121 YFAVNRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLR 180
           YFAVNRQ SPSPVSTP+S+  ++SSLGGR SS  SPR D + W++CSPG +P+QVK KLR
Sbjct: 121 YFAVNRQFSPSPVSTPNSARHSTSSLGGRSSSFGSPRSDTDAWKICSPGDNPQQVKTKLR 180

Query: 181 HWAQAVACSVMQS 190
           HWAQAVACSVMQS
Sbjct: 181 HWAQAVACSVMQS 191

[Close]

BLAST of CmoCh11G009970 vs. TrEMBL
Match: A0A0S3SQ61_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G161300 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.3e-58
Identity = 125/177 (70.62%), Postives = 137/177 (77.40%), Query Frame = 1


Query: 13  LSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRN 72
           LS  SS SS  E D EL+HM LA    K+KKRLSKQLSMCE PRD+AWE+RR Q    R 
Sbjct: 23  LSSSSSSSSPSESDEELQHMLLAPPLWKDKKRLSKQLSMCEKPRDIAWERRRMQ---ERR 82

Query: 73  GGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTP 132
             ST  DDLTDED NELKGCIELGF FNEEDG +LC TLPALDLYFAVNR+LSPSPVSTP
Sbjct: 83  RSSTVCDDLTDEDLNELKGCIELGFGFNEEDGQRLCNTLPALDLYFAVNRRLSPSPVSTP 142

Query: 133 HSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 190
               S +SSLGGR SS  SPR D ++W++CSPG DP+ VK KLRHWAQAVACSVMQS
Sbjct: 143 Q---SRASSLGGRSSSFGSPRSDSDSWKICSPGDDPEHVKTKLRHWAQAVACSVMQS 193

[Close]

BLAST of CmoCh11G009970 vs. TrEMBL
Match: V7BG30_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G188200g PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.3e-57
Identity = 122/179 (68.16%), Postives = 136/179 (75.98%), Query Frame = 1


Query: 11  SALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRP 70
           S+ S  SS SS  E D EL+HM LA     N K+LSKQLSMCE PRD+AWE+RR Q    
Sbjct: 19  SSSSSSSSSSSPSESDEELQHMLLAPPLWSNNKKLSKQLSMCEKPRDIAWERRRMQ---E 78

Query: 71  RNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVS 130
           R   ST  DDLTDED +ELKGCIELGF FNEEDG +LC TLPALDLYFAVNR+LSPSPVS
Sbjct: 79  RRRSSTVCDDLTDEDLHELKGCIELGFGFNEEDGQRLCNTLPALDLYFAVNRRLSPSPVS 138

Query: 131 TPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 190
           TP    S +SSLGGR SS  SPR D ++W++CSPG DP+ VK KLRHWAQAVACSVMQS
Sbjct: 139 TPQ---SRASSLGGRSSSFGSPRSDADSWKICSPGDDPEHVKTKLRHWAQAVACSVMQS 191

[Close]

BLAST of CmoCh11G009970 vs. TrEMBL
Match: V4SEL2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030288mg PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.7e-57
Identity = 127/185 (68.65%), Postives = 147/185 (79.46%), Query Frame = 1


Query: 10  TSALSPLSSCSSLYEQDNELKHMQLASSCL-KNKKRLSKQLSMCETPRDLAWEKRRRQML 69
           +S+ SP SS  +  + + EL+ M LA + L KNKKRLSKQLSMCETPRD+AWEKRRRQML
Sbjct: 15  SSSSSPPSSMLTSSDTE-ELRRMPLAPTSLNKNKKRLSKQLSMCETPRDIAWEKRRRQML 74

Query: 70  RP---RNG-GSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQL 129
           R    +NG   +D+D LTDED +ELKGCIELGF FNEE+G +LC TLPALDLYFAVNRQL
Sbjct: 75  RQERRKNGIHDSDQDLLTDEDLHELKGCIELGFGFNEEEGQQLCNTLPALDLYFAVNRQL 134

Query: 130 SPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVAC 189
           S SPVSTP S  ST SSLGGR SS  SPR D + W++C+PG +P+QVK KLRHWAQAVAC
Sbjct: 135 STSPVSTPQSRAST-SSLGGRSSSFGSPRSDSDAWKICNPGDNPQQVKTKLRHWAQAVAC 194

[Close]

BLAST of CmoCh11G009970 vs. TAIR10
Match: AT1G08790.1 (AT1G08790.1 Protein of unknown function (DUF1685))

HSP 1 Score: 186.0 bits (471), Expect = 2.1e-47
Identity = 114/188 (60.64%), Postives = 130/188 (69.15%), Query Frame = 1


Query: 8   RITSALS-PLSSCSSLYEQD-NELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRR 67
           R+  ALS   SS SS Y+ +  EL+ M L     K KKRLSKQLSM ET RD+AWE+RRR
Sbjct: 3   RVGEALSVSTSSSSSFYDSEVEELQKMPLEPPKAKAKKRLSKQLSMLETRRDIAWERRRR 62

Query: 68  QMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLS 127
           QML      +   DDLTDED +ELKG IELGF FNEE G  L  TLPALDLYFAV RQ+ 
Sbjct: 63  QMLHHLEKHNEGGDDLTDEDLSELKGSIELGFGFNEEQGQHLTTTLPALDLYFAVTRQI- 122

Query: 128 PSPVSTPHSSTSTSS----SLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQA 187
            SPVSTP S  S+SS    SLG R SS  SP  D ++ +V SPG DP+QVK +LRHWAQA
Sbjct: 123 -SPVSTPGSGGSSSSSRPTSLGDRSSSFGSPISDSDSLKVMSPGDDPQQVKTRLRHWAQA 182

Query: 188 VACSVMQS 190
           VACSV+QS
Sbjct: 183 VACSVIQS 188

[Close]

BLAST of CmoCh11G009970 vs. TAIR10
Match: AT3G04700.1 (AT3G04700.1 Protein of unknown function (DUF1685))

HSP 1 Score: 173.3 bits (438), Expect = 1.4e-43
Identity = 94/159 (59.12%), Postives = 114/159 (71.70%), Query Frame = 1


Query: 40  KNKKRLSKQLSMCETPRDLAWEKRRRQMLRPR-----NGGSTD----RDDLTDEDWNELK 99
           K K RLSKQLSMCETPRD+AWE+RRRQM+  +     + G++D    + +LTDED NELK
Sbjct: 32  KPKHRLSKQLSMCETPRDVAWERRRRQMIMIQEKKLLHKGASDNLCIQANLTDEDLNELK 91

Query: 100 GCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSTSSSLGGRGSSCE 159
           G IELGF FNEE G KLC TLPALDLYFAVNRQLSP P  +   S+S S+S       C 
Sbjct: 92  GSIELGFGFNEEAGQKLCNTLPALDLYFAVNRQLSPLPSPSSSRSSSASASTFSYSIPCS 151

Query: 160 SPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 190
             + D ++ ++  PG DP+Q+K +LRHWAQAVACSVMQS
Sbjct: 152 PKKTDSDSVKILCPGDDPQQMKQRLRHWAQAVACSVMQS 190

[Close]

BLAST of CmoCh11G009970 vs. TAIR10
Match: AT5G28690.1 (AT5G28690.1 Protein of unknown function (DUF1685))

HSP 1 Score: 167.9 bits (424), Expect = 6.0e-42
Identity = 95/161 (59.01%), Postives = 111/161 (68.94%), Query Frame = 1


Query: 40  KNKKRLSKQLSMCETPRDLAWEKRRRQMLRPR-------NGGSTDRDDLTDEDWNELKGC 99
           K K+RLSKQLSM ETPRD+AWEKRRRQML+ +       +    D  DLTDED  ELKG 
Sbjct: 33  KPKQRLSKQLSMRETPRDVAWEKRRRQMLKIQEKKQKSVSENDNDSPDLTDEDLRELKGS 92

Query: 100 IELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSTSSSLGGRGSSCE-- 159
           IELGF F+EE G KLC TLPALDLYFAVNRQLSP P  +P SS     SL     S    
Sbjct: 93  IELGFGFSEEAGQKLCNTLPALDLYFAVNRQLSPLP--SPSSSNGGDGSLSSTSVSSSSI 152

Query: 160 --SPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 190
             SP+ D ++ ++  PG +P+QVK +LRHWAQAVACS+MQS
Sbjct: 153 PCSPKTDSDSLKILCPGDNPQQVKQRLRHWAQAVACSLMQS 191

[Close]

BLAST of CmoCh11G009970 vs. TAIR10
Match: AT2G43340.1 (AT2G43340.1 Protein of unknown function (DUF1685))

HSP 1 Score: 89.4 bits (220), Expect = 2.7e-18
Identity = 63/179 (35.20%), Postives = 92/179 (51.40%), Query Frame = 1


Query: 14  SPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRNG 73
           S  SSCS    ++ E+ +        K  K+L K              K+   +L     
Sbjct: 26  SSFSSCSYSESEEEEINNGFGVVQSKKQTKKLEK--------------KKSNVLLEGYVV 85

Query: 74  GSTDRDDL------TDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPS 133
            S   DDL      TD+D  ELKGC++LGF FN E+  +LC TLPAL+L ++++++    
Sbjct: 86  DSAVNDDLKRTKSLTDDDLEELKGCVDLGFGFNYEEIPELCNTLPALELCYSMSQKF--- 145

Query: 134 PVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSV 187
            +   H   S SSS   + S  +SP     +W++ SPG +P  VKA+L+ WAQAVAC+V
Sbjct: 146 -IDQDHHHHS-SSSPEKKSSVLDSPVSPIASWKISSPGDNPDDVKARLKFWAQAVACTV 185

[Close]

BLAST of CmoCh11G009970 vs. TAIR10
Match: AT2G31560.1 (AT2G31560.1 Protein of unknown function (DUF1685))

HSP 1 Score: 85.5 bits (210), Expect = 3.9e-17
Identity = 49/132 (37.12%), Postives = 74/132 (56.06%), Query Frame = 1


Query: 61  EKRRRQMLRPRNGGSTDRDDL------TDEDWNELKGCIELGFAFNEEDGHKLCGTLPAL 120
           EK++ Q+L        D+DDL      TD+D  ELKGC++LGF F+ ++  +LC TLPAL
Sbjct: 73  EKKKSQVLL-EGYALDDQDDLTRAKSLTDDDLEELKGCLDLGFGFSYDEIPELCNTLPAL 132

Query: 121 DLYFAVNRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAK 180
           +L ++++++         H S     S     S   +       W++ SPG DP  VKA+
Sbjct: 133 ELCYSMSQKFLDDKQQNHHKSQEEDDS-----SPPPTTTAPIANWKISSPGDDPDDVKAR 192

Query: 181 LRHWAQAVACSV 187
           L++WAQ VAC+V
Sbjct: 193 LKYWAQTVACTV 198

[Close]

BLAST of CmoCh11G009970 vs. NCBI nr
Match: gi|659125483|ref|XP_008462705.1| (PREDICTED: uncharacterized protein LOC103501007 [Cucumis melo])

HSP 1 Score: 319.7 bits (818), Expect = 3.5e-84
Identity = 165/193 (85.49%), Postives = 173/193 (89.64%), Query Frame = 1


Query: 1   MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 60
           MD K L+R+ S+LS  SSC SL+E D+ELKHM LA   LKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLQRMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAW 60

Query: 61  EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 120
           EKRRRQMLRPRNG STDRDDLTDEDWNELKGCIELGFAFNEE GHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRNG-STDRDDLTDEDWNELKGCIELGFAFNEEYGHKLCGTLPALDLYFAV 120

Query: 121 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 180
           NRQLSPSPVSTP SS ST SSLGGR SS ESPR + +TWRVCSPG+DPKQVKAKLRHWAQ
Sbjct: 121 NRQLSPSPVSTPQSSAST-SSLGGRSSSFESPRSEFDTWRVCSPGEDPKQVKAKLRHWAQ 180

Query: 181 AVACSVMQSLGEK 194
           AVACSVMQSLGEK
Sbjct: 181 AVACSVMQSLGEK 191

[Close]

BLAST of CmoCh11G009970 vs. NCBI nr
Match: gi|449449555|ref|XP_004142530.1| (PREDICTED: uncharacterized protein LOC101212719 [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 6.0e-84
Identity = 163/193 (84.46%), Postives = 172/193 (89.12%), Query Frame = 1


Query: 1   MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 60
           MD K L+R+ S+LS  SSC SL+E ++ELKHM LA   LKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLQRVPSSLSSSSSCPSLHESEDELKHMPLAPPQLKNKKRLSKQLSMCETPRDLAW 60

Query: 61  EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 120
           EKRRRQMLRPRNG STDRDDLTDEDWNELKG IELGFAFNEE GHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRNG-STDRDDLTDEDWNELKGFIELGFAFNEEYGHKLCGTLPALDLYFAV 120

Query: 121 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 180
           NRQLSPSPVSTP SS S SSSLGGR SS ESPR + +TWRVCSPG+DPKQVKAKLRHWAQ
Sbjct: 121 NRQLSPSPVSTPQSSASASSSLGGRSSSFESPRSELDTWRVCSPGEDPKQVKAKLRHWAQ 180

Query: 181 AVACSVMQSLGEK 194
           AVACSVMQSLGEK
Sbjct: 181 AVACSVMQSLGEK 192

[Close]

BLAST of CmoCh11G009970 vs. NCBI nr
Match: gi|1009117682|ref|XP_015875448.1| (PREDICTED: uncharacterized protein LOC107412235 [Ziziphus jujuba])

HSP 1 Score: 240.4 bits (612), Expect = 2.7e-60
Identity = 124/175 (70.86%), Postives = 142/175 (81.14%), Query Frame = 1


Query: 17  SSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRP--RNGG 76
           S  SS  + + EL+HM LA   LK+ KRLSKQLSMCETPRD+AWE+RRRQ+LR   R  G
Sbjct: 21  SQSSSNLDSEEELQHMPLAPPRLKSHKRLSKQLSMCETPRDIAWERRRRQILRQERRKRG 80

Query: 77  STDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHS 136
            +D DDLTDED +ELKGCIELGF FNEEDG +LC TLPALDLYFAVNRQ+SPSPVSTP S
Sbjct: 81  ISDSDDLTDEDLHELKGCIELGFGFNEEDGQRLCSTLPALDLYFAVNRQISPSPVSTPQS 140

Query: 137 STSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 190
             ST SSLG R SS ESP+ + E+W++CSPG DP+QVK KLRHWAQAVACS+MQS
Sbjct: 141 RKST-SSLGERSSSFESPKSESESWKICSPGDDPQQVKTKLRHWAQAVACSLMQS 194

[Close]

BLAST of CmoCh11G009970 vs. NCBI nr
Match: gi|595831489|ref|XP_007206285.1| (hypothetical protein PRUPE_ppa016189mg [Prunus persica])

HSP 1 Score: 237.3 bits (604), Expect = 2.3e-59
Identity = 127/193 (65.80%), Postives = 149/193 (77.20%), Query Frame = 1


Query: 1   MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 60
           M +++ +  TS  S LS   SL   + EL+HM LA   + N+KRLSKQLSMCETPRD+AW
Sbjct: 1   MKDEQCRPPTSYSSSLSL--SLSSSEEELQHMPLAPPKMLNRKRLSKQLSMCETPRDIAW 60

Query: 61  EKRRRQMLRP--RNGGSTDRDD--LTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDL 120
           EKRRRQ+LR   R  G  D DD  LTDED +ELKGCIELGF FNEE+G +LC TLPALDL
Sbjct: 61  EKRRRQILRQERRRNGINDSDDMVLTDEDLHELKGCIELGFGFNEEEGQRLCPTLPALDL 120

Query: 121 YFAVNRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLR 180
           YFAVNRQ SPSPVSTP+S+  ++SSLGGR SS  SPR D + W++CSPG +P+QVK KLR
Sbjct: 121 YFAVNRQFSPSPVSTPNSARHSTSSLGGRSSSFGSPRSDTDAWKICSPGDNPQQVKTKLR 180

Query: 181 HWAQAVACSVMQS 190
           HWAQAVACSVMQS
Sbjct: 181 HWAQAVACSVMQS 191

[Close]

BLAST of CmoCh11G009970 vs. NCBI nr
Match: gi|965608470|dbj|BAT94961.1| (hypothetical protein VIGAN_08161300 [Vigna angularis var. angularis])

HSP 1 Score: 234.2 bits (596), Expect = 1.9e-58
Identity = 125/177 (70.62%), Postives = 137/177 (77.40%), Query Frame = 1


Query: 13  LSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRN 72
           LS  SS SS  E D EL+HM LA    K+KKRLSKQLSMCE PRD+AWE+RR Q    R 
Sbjct: 23  LSSSSSSSSPSESDEELQHMLLAPPLWKDKKRLSKQLSMCEKPRDIAWERRRMQ---ERR 82

Query: 73  GGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTP 132
             ST  DDLTDED NELKGCIELGF FNEEDG +LC TLPALDLYFAVNR+LSPSPVSTP
Sbjct: 83  RSSTVCDDLTDEDLNELKGCIELGFGFNEEDGQRLCNTLPALDLYFAVNRRLSPSPVSTP 142

Query: 133 HSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 190
               S +SSLGGR SS  SPR D ++W++CSPG DP+ VK KLRHWAQAVACSVMQS
Sbjct: 143 Q---SRASSLGGRSSSFGSPRSDSDSWKICSPGDDPEHVKTKLRHWAQAVACSVMQS 193

The following BLAST results are available for this feature:

BLAST of CmoCh11G009970 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh11G009970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY38_CUCSA	4.2e-84	84.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690230 PE=4 SV=1	[more]
M5W1A3_PRUPE	1.6e-59	65.80	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016189mg PE=4 SV=1	[more]
A0A0S3SQ61_PHAAN	1.3e-58	70.62	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G161300 PE=...	[more]
V7BG30_PHAVU	4.3e-57	68.16	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G188200g PE=4 SV=1	[more]
V4SEL2_9ROSI	5.7e-57	68.65	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030288mg PE=4 SV=1	[more]

BLAST of CmoCh11G009970 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08790.1	2.1e-47	60.64	Protein of unknown function (DUF1685)	[more]
AT3G04700.1	1.4e-43	59.12	Protein of unknown function (DUF1685)	[more]
AT5G28690.1	6.0e-42	59.01	Protein of unknown function (DUF1685)	[more]
AT2G43340.1	2.7e-18	35.20	Protein of unknown function (DUF1685)	[more]
AT2G31560.1	3.9e-17	37.12	Protein of unknown function (DUF1685)	[more]

BLAST of CmoCh11G009970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659125483\|ref\|XP_008462705.1\|	3.5e-84	85.49	PREDICTED: uncharacterized protein LOC103501007 [Cucumis melo]	[more]
gi\|449449555\|ref\|XP_004142530.1\|	6.0e-84	84.46	PREDICTED: uncharacterized protein LOC101212719 [Cucumis sativus]	[more]
gi\|1009117682\|ref\|XP_015875448.1\|	2.7e-60	70.86	PREDICTED: uncharacterized protein LOC107412235 [Ziziphus jujuba]	[more]
gi\|595831489\|ref\|XP_007206285.1\|	2.3e-59	65.80	hypothetical protein PRUPE_ppa016189mg [Prunus persica]	[more]
gi\|965608470\|dbj\|BAT94961.1\|	1.9e-58	70.62	hypothetical protein VIGAN_08161300 [Vigna angularis var. angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012881	DUF1685

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G009970.1	CmoCh11G009970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 81..138 score: 4.6
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 24..192 score: 1.0
None	No IPR available	PANTHER	PTHR31865:SF3	F22O13.28	coord: 24..192 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh11G009970	Cucsa.291630	Cucumber (Gy14) v1	cgycmoB0810
CmoCh11G009970	CmaCh10G010140	Cucurbita maxima (Rimu)	cmacmoB077
CmoCh11G009970	CmaCh11G009770	Cucurbita maxima (Rimu)	cmacmoB112
CmoCh11G009970	Csa1G690230	Cucumber (Chinese Long) v2	cmocuB075
CmoCh11G009970	MELO3C024658	Melon (DHL92) v3.5.1	cmomeB102
CmoCh11G009970	CSPI01G33540	Wild cucumber (PI 183967)	cmocpiB083
CmoCh11G009970	Lsi06G007900	Bottle gourd (USVL1VR-Ls)	cmolsiB118
CmoCh11G009970	Cp4.1LG04g01940	Cucurbita pepo (Zucchini)	cmocpeB127
CmoCh11G009970	Cp4.1LG05g08410	Cucurbita pepo (Zucchini)	cmocpeB133
CmoCh11G009970	MELO3C024658.2	Melon (DHL92) v3.6.1	cmomedB110
CmoCh11G009970	CsaV3_1G045510	Cucumber (Chinese Long) v3	cmocucB0090
CmoCh11G009970	Bhi02G001036	Wax gourd	cmowgoB0162
CmoCh11G009970	CsGy1G032180	Cucumber (Gy14) v2	cgybcmoB027
CmoCh11G009970	Carg16477	Silver-seed gourd	carcmoB1222

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G009970	Cucumber (Chinese Long) v3	cmocucB0118
CmoCh11G009970	Watermelon (97103) v2	cmowmbB125
CmoCh11G009970	Wax gourd	cmowgoB0100
CmoCh11G009970	Cucurbita moschata (Rifu)	cmocmoB047
CmoCh11G009970	Cucurbita moschata (Rifu)	cmocmoB086
CmoCh11G009970	Cucurbita maxima (Rimu)	cmacmoB073
CmoCh11G009970	Watermelon (Charleston Gray)	cmowcgB121
CmoCh11G009970	Bottle gourd (USVL1VR-Ls)	cmolsiB084