Lsi06G007900 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G007900
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionChromosome 3B, genomic scaffold, cultivar Chinese Spring
Locationchr06 : 16420051 .. 16421698 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTGTTTCCTTCTCTCCATTAAAGCCCTCCCCTTTTTCTCTGCCCTCACTCGGTCGGGCTGGTTCTGGCCTTCTTCCTAAACAAATTCCCAAATCGGCCACCTCCCCATCCCCGACCCCGGCCCTCTCTCCTCACGCGCGTGGCTGGCGGGTCGTCACGTTCCCCCATTGCCACTCGCCTTTTTTTTGTTTGTTTGTTTTTTTCTTTATACATAACCCTAATGGATAAGAAACACTTGCAAAGGATGCCTTCATCCCTATCCTCGTCGTCATCGTGCCCGTCGCTCCACGAGTCGGACGACGAGCTGAAGCATATGCCATTGGCACCACCGCGATTGAAGAACAAGAAGCGTTTGTCAAAGCAACTTTCAATGTGCGAGACACCAAGGGACCTCGCATGGGAGAAACGGCGACGACAGATGCTCCGCCCAAGGAACGGCTCGACAGATAGGGACGACTTGACCGAAGAGGACTGGAATGAGCTCAAAGGCTGCATTGAGCTAGGGTTTGCATTCAATGAGGAAGATGGGCACAAGCTGTGTGGTACATTGCCGGCCCTTGACCTTTACTTTGCCGTCAATCGGCAGCTATCGCCGAGCCCCGTGTCAACGCCGCAGAGCAGCGCCTCGACGTCATCTCTTGGCGGAAGGTCTTCATCTTTTGAGAGCCCCAAGAGTGAGTCTGATACATGGAGGGTTTGTAGCCCAGGTATGAAGACATAGCTTTCTGTAGGAACTTTAGTTTACTTGCAATTTAATTAGCACTTTTATTCCAGAGAAATTATTTTACCTCAATTTTTTATTCTTTACATTTTGGAAAATCAAGCTTCTAAAACTGTTATATTGTATATTTTAGCAAACTTAAAAAAAAATTCTAAATAAATAAATTAAAGCATCTTCTAAGTTAGAATCATTTAGTTCCCGGGTGATAACCATTTCAATTTTAAAAATTTAATTCTTAACCATCAATTATATATCAAATTATTATTAGTAAGTACAAAATATTATTTTCTAAAATTCAAGGAATAGAATAAATTTACAATTATTTTTTTTAAAAAAAATCATATTTACAAATATTTTAGAAAATGAAGCTACCCATTCAATTTTTTTATTTTTTATTTTTCATTTGATGGATGTAGGAGAAGACCCAAAGCAAGTGAAGGCAAAATTAAGACACTGGGCTCAAGCTGTGGCATGTTCAGTAATGCAATCATTGGGAGAAAAATAAAAGAAAATATTTGAGGAAATATATTGTACAGATGATCAGAAGAGTAAAAAGGAAAAAAAATTAAATTAAAAAAAAAAAGAGGCAGAAAGGGTTTGGTTTCAAACCTTGCATTAGGGTTTGGTGCTACATAAGCTTAAATTAATTCTACAATGCTCTTGTAGTTTTAACAGCAAACATATCTCTCTGATTTGAAGCTAGCTTATTATATACGTGAGGGCCAAAGAAAAAGCCAGAGGCATTTAATGGGAACTTTGGTATATAATTAACTTAGGGGAAAAATATGTTCTTTTTCATTCTCATTATTCAATGTTCATTGTAATTCTATAAATATTATATATATTATATATGTGTGTTTCTCTATGTTGTTCCCCATGTGAAATGTGAACATATCAAACTATATATAAAGCAAAAGTTTAAAAATC

mRNA sequence

ACTGTTTCCTTCTCTCCATTAAAGCCCTCCCCTTTTTCTCTGCCCTCACTCGGTCGGGCTGGTTCTGGCCTTCTTCCTAAACAAATTCCCAAATCGGCCACCTCCCCATCCCCGACCCCGGCCCTCTCTCCTCACGCGCGTGGCTGGCGGGTCGTCACGTTCCCCCATTGCCACTCGCCTTTTTTTTGTTTGTTTGTTTTTTTCTTTATACATAACCCTAATGGATAAGAAACACTTGCAAAGGATGCCTTCATCCCTATCCTCGTCGTCATCGTGCCCGTCGCTCCACGAGTCGGACGACGAGCTGAAGCATATGCCATTGGCACCACCGCGATTGAAGAACAAGAAGCGTTTGTCAAAGCAACTTTCAATGTGCGAGACACCAAGGGACCTCGCATGGGAGAAACGGCGACGACAGATGCTCCGCCCAAGGAACGGCTCGACAGATAGGGACGACTTGACCGAAGAGGACTGGAATGAGCTCAAAGGCTGCATTGAGCTAGGGTTTGCATTCAATGAGGAAGATGGGCACAAGCTGTGTGGTACATTGCCGGCCCTTGACCTTTACTTTGCCGTCAATCGGCAGCTATCGCCGAGCCCCGTGTCAACGCCGCAGAGCAGCGCCTCGACGTCATCTCTTGGCGGAAGGTCTTCATCTTTTGAGAGCCCCAAGAGTGAGTCTGATACATGGAGGGTTTGTAGCCCAGGAGAAGACCCAAAGCAAGTGAAGGCAAAATTAAGACACTGGGCTCAAGCTGTGGCATGTTCAGTAATGCAATCATTGGGAGAAAAATAAAAGAAAATATTTGAGGAAATATATTGTACAGATGATCAGAAGAGTAAAAAGGAAAAAAAATTAAATTAAAAAAAAAAAGAGGCAGAAAGGGTTTGGTTTCAAACCTTGCATTAGGGTTTGGTGCTACATAAGCTTAAATTAATTCTACAATGCTCTTGTAGTTTTAACAGCAAACATATCTCTCTGATTTGAAGCTAGCTTATTATATACGTGAGGGCCAAAGAAAAAGCCAGAGGCATTTAATGGGAACTTTGGTATATAATTAACTTAGGGGAAAAATATGTTCTTTTTCATTCTCATTATTCAATGTTCATTGTAATTCTATAAATATTATATATATTATATATGTGTGTTTCTCTATGTTGTTCCCCATGTGAAATGTGAACATATCAAACTATATATAAAGCAAAAGTTTAAAAATC

Coding sequence (CDS)

ATGGATAAGAAACACTTGCAAAGGATGCCTTCATCCCTATCCTCGTCGTCATCGTGCCCGTCGCTCCACGAGTCGGACGACGAGCTGAAGCATATGCCATTGGCACCACCGCGATTGAAGAACAAGAAGCGTTTGTCAAAGCAACTTTCAATGTGCGAGACACCAAGGGACCTCGCATGGGAGAAACGGCGACGACAGATGCTCCGCCCAAGGAACGGCTCGACAGATAGGGACGACTTGACCGAAGAGGACTGGAATGAGCTCAAAGGCTGCATTGAGCTAGGGTTTGCATTCAATGAGGAAGATGGGCACAAGCTGTGTGGTACATTGCCGGCCCTTGACCTTTACTTTGCCGTCAATCGGCAGCTATCGCCGAGCCCCGTGTCAACGCCGCAGAGCAGCGCCTCGACGTCATCTCTTGGCGGAAGGTCTTCATCTTTTGAGAGCCCCAAGAGTGAGTCTGATACATGGAGGGTTTGTAGCCCAGGAGAAGACCCAAAGCAAGTGAAGGCAAAATTAAGACACTGGGCTCAAGCTGTGGCATGTTCAGTAATGCAATCATTGGGAGAAAAATAA

Protein sequence

MDKKHLQRMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRNGSTDRDDLTEEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPQSSASTSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVKAKLRHWAQAVACSVMQSLGEK
Homology
[Close]
BLAST of Lsi06G007900 vs. TrEMBL
Match: A0A0A0LY38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690230 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.1e-96
Identity = 182/192 (94.79%), Postives = 188/192 (97.92%), Query Frame = 1 

Query: 1   MDKKHLQRMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAW 60
           MDKKHLQR+PSSLSSSSSCPSLHES+DELKHMPLAPP+LKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLQRVPSSLSSSSSCPSLHESEDELKHMPLAPPQLKNKKRLSKQLSMCETPRDLAW 60

Query: 61  EKRRRQMLRPRNGSTDRDDLTEEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVN 120
           EKRRRQMLRPRNGSTDRDDLT+EDWNELKG IELGFAFNEE GHKLCGTLPALDLYFAVN
Sbjct: 61  EKRRRQMLRPRNGSTDRDDLTDEDWNELKGFIELGFAFNEEYGHKLCGTLPALDLYFAVN 120

Query: 121 RQLSPSPVSTPQSSAS-TSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVKAKLRHWAQA 180
           RQLSPSPVSTPQSSAS +SSLGGRSSSFESP+SE DTWRVCSPGEDPKQVKAKLRHWAQA
Sbjct: 121 RQLSPSPVSTPQSSASASSSLGGRSSSFESPRSELDTWRVCSPGEDPKQVKAKLRHWAQA 180

Query: 181 VACSVMQSLGEK 192
           VACSVMQSLGEK
Sbjct: 181 VACSVMQSLGEK 192

[Close]
BLAST of Lsi06G007900 vs. TrEMBL
Match: M5W1A3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016189mg PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 8.6e-66
Identity = 136/186 (73.12%), Postives = 158/186 (84.95%), Query Frame = 1 

Query: 8   RMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAWEKRRRQM 67
           R P+S SSS S  SL  S++EL+HMPLAPP++ N+KRLSKQLSMCETPRD+AWEKRRRQ+
Sbjct: 7   RPPTSYSSSLSL-SLSSSEEELQHMPLAPPKMLNRKRLSKQLSMCETPRDIAWEKRRRQI 66

Query: 68  LRP---RNGSTDRDD--LTEEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQ 127
           LR    RNG  D DD  LT+ED +ELKGCIELGF FNEE+G +LC TLPALDLYFAVNRQ
Sbjct: 67  LRQERRRNGINDSDDMVLTDEDLHELKGCIELGFGFNEEEGQRLCPTLPALDLYFAVNRQ 126

Query: 128 LSPSPVSTPQSSA-STSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVKAKLRHWAQAVA 187
            SPSPVSTP S+  STSSLGGRSSSF SP+S++D W++CSPG++P+QVK KLRHWAQAVA
Sbjct: 127 FSPSPVSTPNSARHSTSSLGGRSSSFGSPRSDTDAWKICSPGDNPQQVKTKLRHWAQAVA 186

[Close]
BLAST of Lsi06G007900 vs. TrEMBL
Match: A0A0S3SQ61_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G161300 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 2.8e-64
Identity = 136/183 (74.32%), Postives = 151/183 (82.51%), Query Frame = 1 

Query: 5   HLQRMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAWEKRR 64
           H   M  S SSSSS PS  ESD+EL+HM LAPP  K+KKRLSKQLSMCE PRD+AWE+RR
Sbjct: 17  HHHEMLLSSSSSSSSPS--ESDEELQHMLLAPPLWKDKKRLSKQLSMCEKPRDIAWERRR 76

Query: 65  RQMLRPRNGSTDRDDLTEEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLS 124
            Q    R  ST  DDLT+ED NELKGCIELGF FNEEDG +LC TLPALDLYFAVNR+LS
Sbjct: 77  MQ--ERRRSSTVCDDLTDEDLNELKGCIELGFGFNEEDGQRLCNTLPALDLYFAVNRRLS 136

Query: 125 PSPVSTPQSSASTSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVKAKLRHWAQAVACSV 184
           PSPVSTPQS A  SSLGGRSSSF SP+S+SD+W++CSPG+DP+ VK KLRHWAQAVACSV
Sbjct: 137 PSPVSTPQSRA--SSLGGRSSSFGSPRSDSDSWKICSPGDDPEHVKTKLRHWAQAVACSV 193

Query: 185 MQS 188
           MQS
Sbjct: 197 MQS 193

[Close]
BLAST of Lsi06G007900 vs. TrEMBL
Match: V4SEL2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030288mg PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.6e-64
Identity = 141/197 (71.57%), Postives = 159/197 (80.71%), Query Frame = 1 

Query: 1   MDKKHLQRMPSSLSSSSSCPS---LHESD-DELKHMPLAPPRL-KNKKRLSKQLSMCETP 60
           MDK       S  SSSSS P    L  SD +EL+ MPLAP  L KNKKRLSKQLSMCETP
Sbjct: 1   MDKNKASLSQSVSSSSSSSPPSSMLTSSDTEELRRMPLAPTSLNKNKKRLSKQLSMCETP 60

Query: 61  RDLAWEKRRRQMLRP---RNG--STDRDDLTEEDWNELKGCIELGFAFNEEDGHKLCGTL 120
           RD+AWEKRRRQMLR    +NG   +D+D LT+ED +ELKGCIELGF FNEE+G +LC TL
Sbjct: 61  RDIAWEKRRRQMLRQERRKNGIHDSDQDLLTDEDLHELKGCIELGFGFNEEEGQQLCNTL 120

Query: 121 PALDLYFAVNRQLSPSPVSTPQSSASTSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVK 180
           PALDLYFAVNRQLS SPVSTPQS ASTSSLGGRSSSF SP+S+SD W++C+PG++P+QVK
Sbjct: 121 PALDLYFAVNRQLSTSPVSTPQSRASTSSLGGRSSSFGSPRSDSDAWKICNPGDNPQQVK 180

Query: 181 AKLRHWAQAVACSVMQS 188
            KLRHWAQAVACSVMQS
Sbjct: 181 TKLRHWAQAVACSVMQS 197

[Close]
BLAST of Lsi06G007900 vs. TrEMBL
Match: V7BG30_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G188200g PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.0e-62
Identity = 130/177 (73.45%), Postives = 147/177 (83.05%), Query Frame = 1 

Query: 11  SSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRP 70
           SS SSSSS  S  ESD+EL+HM LAPP   N K+LSKQLSMCE PRD+AWE+RR Q    
Sbjct: 19  SSSSSSSSSSSPSESDEELQHMLLAPPLWSNNKKLSKQLSMCEKPRDIAWERRRMQ--ER 78

Query: 71  RNGSTDRDDLTEEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVST 130
           R  ST  DDLT+ED +ELKGCIELGF FNEEDG +LC TLPALDLYFAVNR+LSPSPVST
Sbjct: 79  RRSSTVCDDLTDEDLHELKGCIELGFGFNEEDGQRLCNTLPALDLYFAVNRRLSPSPVST 138

Query: 131 PQSSASTSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVKAKLRHWAQAVACSVMQS 188
           PQS A  SSLGGRSSSF SP+S++D+W++CSPG+DP+ VK KLRHWAQAVACSVMQS
Sbjct: 139 PQSRA--SSLGGRSSSFGSPRSDADSWKICSPGDDPEHVKTKLRHWAQAVACSVMQS 191

[Close]
BLAST of Lsi06G007900 vs. TAIR10
Match: AT1G08790.1 (AT1G08790.1 Protein of unknown function (DUF1685))

HSP 1 Score: 197.2 bits (500), Expect = 9.1e-51
Identity = 118/188 (62.77%), Postives = 141/188 (75.00%), Query Frame = 1 

Query: 8   RMPSSLS-SSSSCPSLHESD-DELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAWEKRRR 67
           R+  +LS S+SS  S ++S+ +EL+ MPL PP+ K KKRLSKQLSM ET RD+AWE+RRR
Sbjct: 3   RVGEALSVSTSSSSSFYDSEVEELQKMPLEPPKAKAKKRLSKQLSMLETRRDIAWERRRR 62

Query: 68  QMLRPRNGSTDR-DDLTEEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLS 127
           QML       +  DDLT+ED +ELKG IELGF FNEE G  L  TLPALDLYFAV RQ+S
Sbjct: 63  QMLHHLEKHNEGGDDLTDEDLSELKGSIELGFGFNEEQGQHLTTTLPALDLYFAVTRQIS 122

Query: 128 PSPVSTPQSSASTSS-----LGGRSSSFESPKSESDTWRVCSPGEDPKQVKAKLRHWAQA 187
           P  VSTP S  S+SS     LG RSSSF SP S+SD+ +V SPG+DP+QVK +LRHWAQA
Sbjct: 123 P--VSTPGSGGSSSSSRPTSLGDRSSSFGSPISDSDSLKVMSPGDDPQQVKTRLRHWAQA 182

[Close]
BLAST of Lsi06G007900 vs. TAIR10
Match: AT5G28690.1 (AT5G28690.1 Protein of unknown function (DUF1685))

HSP 1 Score: 177.2 bits (448), Expect = 9.8e-45
Identity = 110/187 (58.82%), Postives = 131/187 (70.05%), Query Frame = 1 

Query: 12  SLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPR 71
           +L  SSS PSL ES  ++K   +AP   K K+RLSKQLSM ETPRD+AWEKRRRQML+ +
Sbjct: 9   TLPISSSTPSLPESLPDIK--TVAPH--KPKQRLSKQLSMRETPRDVAWEKRRRQMLKIQ 68

Query: 72  N--------GSTDRDDLTEEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQL 131
                       D  DLT+ED  ELKG IELGF F+EE G KLC TLPALDLYFAVNRQL
Sbjct: 69  EKKQKSVSENDNDSPDLTDEDLRELKGSIELGFGFSEEAGQKLCNTLPALDLYFAVNRQL 128

Query: 132 S--PSPVSTPQSSASTSSLGGRSSSFE-SPKSESDTWRVCSPGEDPKQVKAKLRHWAQAV 188
           S  PSP S+     S SS    SSS   SPK++SD+ ++  PG++P+QVK +LRHWAQAV
Sbjct: 129 SPLPSPSSSNGGDGSLSSTSVSSSSIPCSPKTDSDSLKILCPGDNPQQVKQRLRHWAQAV 188

[Close]
BLAST of Lsi06G007900 vs. TAIR10
Match: AT3G04700.1 (AT3G04700.1 Protein of unknown function (DUF1685))

HSP 1 Score: 170.6 bits (431), Expect = 9.2e-43
Identity = 95/159 (59.75%), Postives = 119/159 (74.84%), Query Frame = 1 

Query: 40  KNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRN------GSTD----RDDLTEEDWNELK 99
           K K RLSKQLSMCETPRD+AWE+RRRQM+  +       G++D    + +LT+ED NELK
Sbjct: 32  KPKHRLSKQLSMCETPRDVAWERRRRQMIMIQEKKLLHKGASDNLCIQANLTDEDLNELK 91

Query: 100 GCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSP-VSTPQSSASTSSLGGRSSSFE 159
           G IELGF FNEE G KLC TLPALDLYFAVNRQLSP P  S+ +SS++++S    S    
Sbjct: 92  GSIELGFGFNEEAGQKLCNTLPALDLYFAVNRQLSPLPSPSSSRSSSASASTFSYSIPCS 151

Query: 160 SPKSESDTWRVCSPGEDPKQVKAKLRHWAQAVACSVMQS 188
             K++SD+ ++  PG+DP+Q+K +LRHWAQAVACSVMQS
Sbjct: 152 PKKTDSDSVKILCPGDDPQQMKQRLRHWAQAVACSVMQS 190

[Close]
BLAST of Lsi06G007900 vs. TAIR10
Match: AT2G43340.1 (AT2G43340.1 Protein of unknown function (DUF1685))

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18
Identity = 60/173 (34.68%), Postives = 95/173 (54.91%), Query Frame = 1 

Query: 12  SLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPR 71
           S SS SSC      ++E+ +        K  K+L K+ S       +        + R +
Sbjct: 24  STSSFSSCSYSESEEEEINNGFGVVQSKKQTKKLEKKKSNVLLEGYVVDSAVNDDLKRTK 83

Query: 72  NGSTDRDDLTEEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTP 131
           +       LT++D  ELKGC++LGF FN E+  +LC TLPAL+L ++++++     +   
Sbjct: 84  S-------LTDDDLEELKGCVDLGFGFNYEEIPELCNTLPALELCYSMSQKF----IDQD 143

Query: 132 QSSASTSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVKAKLRHWAQAVACSV 185
               S+SS   +SS  +SP S   +W++ SPG++P  VKA+L+ WAQAVAC+V
Sbjct: 144 HHHHSSSSPEKKSSVLDSPVSPIASWKISSPGDNPDDVKARLKFWAQAVACTV 185

[Close]
BLAST of Lsi06G007900 vs. TAIR10
Match: AT2G31560.1 (AT2G31560.1 Protein of unknown function (DUF1685))

HSP 1 Score: 85.1 bits (209), Expect = 5.1e-17
Identity = 48/130 (36.92%), Postives = 78/130 (60.00%), Query Frame = 1 

Query: 61  EKRRRQMLRPRNGSTDRDDL------TEEDWNELKGCIELGFAFNEEDGHKLCGTLPALD 120
           EK++ Q+L       D+DDL      T++D  ELKGC++LGF F+ ++  +LC TLPAL+
Sbjct: 73  EKKKSQVLLEGYALDDQDDLTRAKSLTDDDLEELKGCLDLGFGFSYDEIPELCNTLPALE 132

Query: 121 LYFAVNRQLSPSPVSTPQSSASTSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVKAKLR 180
           L ++++++     +   Q +   S     SS   +  +    W++ SPG+DP  VKA+L+
Sbjct: 133 LCYSMSQKF----LDDKQQNHHKSQEEDDSSPPPTTTAPIANWKISSPGDDPDDVKARLK 192

Query: 181 HWAQAVACSV 185
           +WAQ VAC+V
Sbjct: 193 YWAQTVACTV 198

[Close]
BLAST of Lsi06G007900 vs. NCBI nr
Match: gi|659125483|ref|XP_008462705.1| (PREDICTED: uncharacterized protein LOC103501007 [Cucumis melo])

HSP 1 Score: 374.8 bits (961), Expect = 9.1e-101
Identity = 187/191 (97.91%), Postives = 189/191 (98.95%), Query Frame = 1 

Query: 1   MDKKHLQRMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAW 60
           MDKKHLQRMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLQRMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAW 60

Query: 61  EKRRRQMLRPRNGSTDRDDLTEEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVN 120
           EKRRRQMLRPRNGSTDRDDLT+EDWNELKGCIELGFAFNEE GHKLCGTLPALDLYFAVN
Sbjct: 61  EKRRRQMLRPRNGSTDRDDLTDEDWNELKGCIELGFAFNEEYGHKLCGTLPALDLYFAVN 120

Query: 121 RQLSPSPVSTPQSSASTSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVKAKLRHWAQAV 180
           RQLSPSPVSTPQSSASTSSLGGRSSSFESP+SE DTWRVCSPGEDPKQVKAKLRHWAQAV
Sbjct: 121 RQLSPSPVSTPQSSASTSSLGGRSSSFESPRSEFDTWRVCSPGEDPKQVKAKLRHWAQAV 180

Query: 181 ACSVMQSLGEK 192
           ACSVMQSLGEK
Sbjct: 181 ACSVMQSLGEK 191

[Close]
BLAST of Lsi06G007900 vs. NCBI nr
Match: gi|449449555|ref|XP_004142530.1| (PREDICTED: uncharacterized protein LOC101212719 [Cucumis sativus])

HSP 1 Score: 359.8 bits (922), Expect = 3.0e-96
Identity = 182/192 (94.79%), Postives = 188/192 (97.92%), Query Frame = 1 

Query: 1   MDKKHLQRMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAW 60
           MDKKHLQR+PSSLSSSSSCPSLHES+DELKHMPLAPP+LKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLQRVPSSLSSSSSCPSLHESEDELKHMPLAPPQLKNKKRLSKQLSMCETPRDLAW 60

Query: 61  EKRRRQMLRPRNGSTDRDDLTEEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVN 120
           EKRRRQMLRPRNGSTDRDDLT+EDWNELKG IELGFAFNEE GHKLCGTLPALDLYFAVN
Sbjct: 61  EKRRRQMLRPRNGSTDRDDLTDEDWNELKGFIELGFAFNEEYGHKLCGTLPALDLYFAVN 120

Query: 121 RQLSPSPVSTPQSSAS-TSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVKAKLRHWAQA 180
           RQLSPSPVSTPQSSAS +SSLGGRSSSFESP+SE DTWRVCSPGEDPKQVKAKLRHWAQA
Sbjct: 121 RQLSPSPVSTPQSSASASSSLGGRSSSFESPRSELDTWRVCSPGEDPKQVKAKLRHWAQA 180

Query: 181 VACSVMQSLGEK 192
           VACSVMQSLGEK
Sbjct: 181 VACSVMQSLGEK 192

[Close]
BLAST of Lsi06G007900 vs. NCBI nr
Match: gi|1009117682|ref|XP_015875448.1| (PREDICTED: uncharacterized protein LOC107412235 [Ziziphus jujuba])

HSP 1 Score: 270.0 bits (689), Expect = 3.1e-69
Identity = 140/193 (72.54%), Postives = 165/193 (85.49%), Query Frame = 1 

Query: 1   MDKKH---LQRMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRD 60
           M+++H   +Q    SLSS SS  S  +S++EL+HMPLAPPRLK+ KRLSKQLSMCETPRD
Sbjct: 4   MERRHDPQVQEKEVSLSSQSS--SNLDSEEELQHMPLAPPRLKSHKRLSKQLSMCETPRD 63

Query: 61  LAWEKRRRQMLRP---RNGSTDRDDLTEEDWNELKGCIELGFAFNEEDGHKLCGTLPALD 120
           +AWE+RRRQ+LR    + G +D DDLT+ED +ELKGCIELGF FNEEDG +LC TLPALD
Sbjct: 64  IAWERRRRQILRQERRKRGISDSDDLTDEDLHELKGCIELGFGFNEEDGQRLCSTLPALD 123

Query: 121 LYFAVNRQLSPSPVSTPQSSASTSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVKAKLR 180
           LYFAVNRQ+SPSPVSTPQS  STSSLG RSSSFESPKSES++W++CSPG+DP+QVK KLR
Sbjct: 124 LYFAVNRQISPSPVSTPQSRKSTSSLGERSSSFESPKSESESWKICSPGDDPQQVKTKLR 183

Query: 181 HWAQAVACSVMQS 188
           HWAQAVACS+MQS
Sbjct: 184 HWAQAVACSLMQS 194

[Close]
BLAST of Lsi06G007900 vs. NCBI nr
Match: gi|595831489|ref|XP_007206285.1| (hypothetical protein PRUPE_ppa016189mg [Prunus persica])

HSP 1 Score: 258.1 bits (658), Expect = 1.2e-65
Identity = 136/186 (73.12%), Postives = 158/186 (84.95%), Query Frame = 1 

Query: 8   RMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAWEKRRRQM 67
           R P+S SSS S  SL  S++EL+HMPLAPP++ N+KRLSKQLSMCETPRD+AWEKRRRQ+
Sbjct: 7   RPPTSYSSSLSL-SLSSSEEELQHMPLAPPKMLNRKRLSKQLSMCETPRDIAWEKRRRQI 66

Query: 68  LRP---RNGSTDRDD--LTEEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQ 127
           LR    RNG  D DD  LT+ED +ELKGCIELGF FNEE+G +LC TLPALDLYFAVNRQ
Sbjct: 67  LRQERRRNGINDSDDMVLTDEDLHELKGCIELGFGFNEEEGQRLCPTLPALDLYFAVNRQ 126

Query: 128 LSPSPVSTPQSSA-STSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVKAKLRHWAQAVA 187
            SPSPVSTP S+  STSSLGGRSSSF SP+S++D W++CSPG++P+QVK KLRHWAQAVA
Sbjct: 127 FSPSPVSTPNSARHSTSSLGGRSSSFGSPRSDTDAWKICSPGDNPQQVKTKLRHWAQAVA 186

[Close]
BLAST of Lsi06G007900 vs. NCBI nr
Match: gi|568869325|ref|XP_006487878.1| (PREDICTED: uncharacterized protein LOC102613894 [Citrus sinensis])

HSP 1 Score: 254.2 bits (648), Expect = 1.8e-64
Identity = 142/196 (72.45%), Postives = 160/196 (81.63%), Query Frame = 1 

Query: 1   MDKKHLQRMPSSLSSSSSCPS--LHESD-DELKHMPLAPPRL-KNKKRLSKQLSMCETPR 60
           MDK       S  SSSSS PS  L  SD +EL+ MPLAP  L KNKKRLSKQLSMCETPR
Sbjct: 1   MDKNKASLSQSVSSSSSSPPSSMLTSSDTEELRRMPLAPTSLNKNKKRLSKQLSMCETPR 60

Query: 61  DLAWEKRRRQMLRP---RNG--STDRDDLTEEDWNELKGCIELGFAFNEEDGHKLCGTLP 120
           D+AWEKRRRQMLR    +NG   +D+D LT+ED +ELKGCIELGF FNEE+G +LC TLP
Sbjct: 61  DIAWEKRRRQMLRQERRKNGIHDSDQDLLTDEDLHELKGCIELGFGFNEEEGQQLCNTLP 120

Query: 121 ALDLYFAVNRQLSPSPVSTPQSSASTSSLGGRSSSFESPKSESDTWRVCSPGEDPKQVKA 180
           ALDLYFAVNRQLS SPVSTPQS ASTSSLGGRSSSF SP+S+SD W++C+PG++P+QVK 
Sbjct: 121 ALDLYFAVNRQLSTSPVSTPQSRASTSSLGGRSSSFGSPRSDSDAWKICNPGDNPQQVKT 180

Query: 181 KLRHWAQAVACSVMQS 188
           KLRHWAQAVACSVMQS
Sbjct: 181 KLRHWAQAVACSVMQS 196

The following BLAST results are available for this feature:
BLAST of Lsi06G007900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi06G007900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY38_CUCSA2.1e-9694.79Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690230 PE=4 SV=1[more]
M5W1A3_PRUPE8.6e-6673.12Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016189mg PE=4 SV=1[more]
A0A0S3SQ61_PHAAN2.8e-6474.32Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G161300 PE=... [more]
V4SEL2_9ROSI3.6e-6471.57Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030288mg PE=4 SV=1[more]
V7BG30_PHAVU2.0e-6273.45Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G188200g PE=4 SV=1[more]
BLAST of Lsi06G007900 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G08790.19.1e-5162.77 Protein of unknown function (DUF1685)[more]
AT5G28690.19.8e-4558.82 Protein of unknown function (DUF1685)[more]
AT3G04700.19.2e-4359.75 Protein of unknown function (DUF1685)[more]
AT2G43340.11.2e-1834.68 Protein of unknown function (DUF1685)[more]
AT2G31560.15.1e-1736.92 Protein of unknown function (DUF1685)[more]
BLAST of Lsi06G007900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659125483|ref|XP_008462705.1|9.1e-10197.91PREDICTED: uncharacterized protein LOC103501007 [Cucumis melo][more]
gi|449449555|ref|XP_004142530.1|3.0e-9694.79PREDICTED: uncharacterized protein LOC101212719 [Cucumis sativus][more]
gi|1009117682|ref|XP_015875448.1|3.1e-6972.54PREDICTED: uncharacterized protein LOC107412235 [Ziziphus jujuba][more]
gi|595831489|ref|XP_007206285.1|1.2e-6573.12hypothetical protein PRUPE_ppa016189mg [Prunus persica][more]
gi|568869325|ref|XP_006487878.1|1.8e-6472.45PREDICTED: uncharacterized protein LOC102613894 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012881DUF1685
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G007900.1Lsi06G007900.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012881Protein of unknown function DUF1685PFAMPF07939DUF1685coord: 80..137
score: 1.6
NoneNo IPR availablePANTHERPTHR31865FAMILY NOT NAMEDcoord: 24..190
score: 3.1
NoneNo IPR availablePANTHERPTHR31865:SF3F22O13.28coord: 24..190
score: 3.1
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: