Cp4.1LG03g11530 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g11530
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionNutrient reservoir
LocationCp4.1LG03 : 10896457 .. 10896984 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACTGCCATTTCTCTGAAACTTTTCATCTCTCTCACGGCGGTTCTCCTCAGTTTTCCGGCTGGATTTTCGTCGCTTCCGACGGCCGACCGCCGCACTCTCGCCGGCGCTAAATACCAAATCGAATGCACAATGTGCTCTGCTTGTGACAATCCCTGCGGCCAGTATCTGTCTCCACCACCTCCTCCGCCGTCTCCTCCTCCATCCATCAACTGCCCACCACCACCTTCTCCCCCCAGCTCCGGTACCTACTATTACTCTCCTCCCCCACCTCCATCTCAACCCACTTACACATACTCCTCCTCGCCGCCGCCGCCTGGCAACTACGGACCGAGTGGGTACTACCAACCGCCTCCGTACAGTAATTACCCGGCCCCCCCACCGCCGAACCCGATTGTGCCGTATTTCCCATTCTATTTTCACACTCCGCCACCGGGCTCCGCCGCTGCCGGCCGTTTGACGAACTCTTGGGCTTGCTCTGTTCTTACTGTTCCTCTGTTTTTGTTCTTGCTTGCTTTGTTTTAA

mRNA sequence

ATGGAAACTGCCATTTCTCTGAAACTTTTCATCTCTCTCACGGCGGTTCTCCTCAGTTTTCCGGCTGGATTTTCGTCGCTTCCGACGGCCGACCGCCGCACTCTCGCCGGCGCTAAATACCAAATCGAATGCACAATGTGCTCTGCTTGTGACAATCCCTGCGGCCAGTATCTGTCTCCACCACCTCCTCCGCCGTCTCCTCCTCCATCCATCAACTGCCCACCACCACCTTCTCCCCCCAGCTCCGGTACCTACTATTACTCTCCTCCCCCACCTCCATCTCAACCCACTTACACATACTCCTCCTCGCCGCCGCCGCCTGGCAACTACGGACCGAGTGGGTACTACCAACCGCCTCCGTACAGTAATTACCCGGCCCCCCCACCGCCGAACCCGATTGTGCCGTATTTCCCATTCTATTTTCACACTCCGCCACCGGGCTCCGCCGCTGCCGGCCGTTTGACGAACTCTTGGGCTTGCTCTGTTCTTACTGTTCCTCTGTTTTTGTTCTTGCTTGCTTTGTTTTAA

Coding sequence (CDS)

ATGGAAACTGCCATTTCTCTGAAACTTTTCATCTCTCTCACGGCGGTTCTCCTCAGTTTTCCGGCTGGATTTTCGTCGCTTCCGACGGCCGACCGCCGCACTCTCGCCGGCGCTAAATACCAAATCGAATGCACAATGTGCTCTGCTTGTGACAATCCCTGCGGCCAGTATCTGTCTCCACCACCTCCTCCGCCGTCTCCTCCTCCATCCATCAACTGCCCACCACCACCTTCTCCCCCCAGCTCCGGTACCTACTATTACTCTCCTCCCCCACCTCCATCTCAACCCACTTACACATACTCCTCCTCGCCGCCGCCGCCTGGCAACTACGGACCGAGTGGGTACTACCAACCGCCTCCGTACAGTAATTACCCGGCCCCCCCACCGCCGAACCCGATTGTGCCGTATTTCCCATTCTATTTTCACACTCCGCCACCGGGCTCCGCCGCTGCCGGCCGTTTGACGAACTCTTGGGCTTGCTCTGTTCTTACTGTTCCTCTGTTTTTGTTCTTGCTTGCTTTGTTTTAA

Protein sequence

METAISLKLFISLTAVLLSFPAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPSINCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSSPPPPGNYGPSGYYQPPPYSNYPAPPPPNPIVPYFPFYFHTPPPGSAAAGRLTNSWACSVLTVPLFLFLLALF
Homology
[Close]
BLAST of Cp4.1LG03g11530 vs. TrEMBL
Match: A0A0A0LAN7_CUCSA (Nutrient reservoir OS=Cucumis sativus GN=Csa_3G165630 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.7e-65
Identity = 139/176 (78.98%), Postives = 149/176 (84.66%), Query Frame = 1 

Query: 1   METAISLKLFISLTAVLLSFPAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSP 60
           MET I L+  ISLTA+LL FP+G SSLP    R+ AGAKYQIECTMCSACDNPC QYLSP
Sbjct: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60

Query: 61  PPPPPSPPPSINCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSSPPPPGNYGPSGYYQPPP 120
           PPPPPSPPP +NCPPPPSPPSSGTY Y  PPPP+QP+YTYSS PPP G  GP GYYQPPP
Sbjct: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFYFHTPPPGSAAA-GRLTNSWACSVLTVPLFLFLLALF 176
           YSNYPAPPPPNPIVPYFPF++HTPPPGS+AA  RLTNS  CSVLTV LF FLLALF
Sbjct: 121 YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF 176

[Close]
BLAST of Cp4.1LG03g11530 vs. TrEMBL
Match: F6H6U0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01460 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 7.2e-35
Identity = 101/160 (63.12%), Postives = 113/160 (70.62%), Query Frame = 1 

Query: 5   ISLKLFISLTAVLL--SFPAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSPPP 64
           + + LF+++  V+   S+PA      TAD    A +KYQIECTMCSACDNPC Q  SPPP
Sbjct: 7   VRMLLFVAVFMVVQRQSWPA------TAD--VAAKSKYQIECTMCSACDNPCNQVPSPPP 66

Query: 65  PPPSPPP--------SINCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSSPPPPGNY---- 124
           P PSPPP        S NCPPPPSPPS+ TYYYSPPPP SQPTY YSS PPPP  Y    
Sbjct: 67  PNPSPPPPSPPPPSSSSNCPPPPSPPSNPTYYYSPPPP-SQPTYVYSS-PPPPNGYNGGG 126

Query: 125 GPSGYYQPPPYSNYPAPPPPNPIVPYFPFYFHTPPPGSAA 151
           G  G + PPPY NYPAPPPPNPIVPYFPF++HTPPP SAA
Sbjct: 127 GGGGAFYPPPYQNYPAPPPPNPIVPYFPFWYHTPPPTSAA 156

[Close]
BLAST of Cp4.1LG03g11530 vs. TrEMBL
Match: A0A067JWJ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13988 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.1e-30
Identity = 98/178 (55.06%), Postives = 117/178 (65.73%), Query Frame = 1 

Query: 12  SLTAVLLSFPAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSPPPPPP------ 71
           +L +V + F   FS   TA   T   +K QI CTMCSACDNPC Q L PPPPPP      
Sbjct: 6   TLFSVFILFLVNFSL--TASTITPTSSKDQISCTMCSACDNPC-QPLPPPPPPPVSECPP 65

Query: 72  ---SPPPSI--NCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSSPPPPGNYGPSG-YYQPP 131
               PPP++  +CPPPP  PSSGTYYYSPPPPPS+PTY Y SSPPPP N G SG +Y PP
Sbjct: 66  PPSPPPPAVVSDCPPPPVTPSSGTYYYSPPPPPSEPTYIY-SSPPPPENSGDSGEFYPPP 125

Query: 132 PYSNYPAPPPPNPIVPYFPFYFHTPPPGSAA--AGRLTNSWACSVLTVPLFLFLLALF 176
            Y NY APPPPNPI+PYFPFY++ PPP S A  + RL   +    + + +FLF+  +F
Sbjct: 126 NYGNYAAPPPPNPILPYFPFYYYNPPPSSFASQSARLEMHFP---IALSIFLFVSFIF 176

[Close]
BLAST of Cp4.1LG03g11530 vs. TrEMBL
Match: B9RZK7_RICCO (Nutrient reservoir, putative OS=Ricinus communis GN=RCOM_0999350 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.5e-29
Identity = 101/175 (57.71%), Postives = 116/175 (66.29%), Query Frame = 1 

Query: 8   KLFISLTAVLLSFPAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSPPPPPPSP 67
           K+ +SL A L+  P    S P    R L    YQI CTMCS C NP     SPPPPPPSP
Sbjct: 6   KITLSLLAFLVVLPFTSPS-PVPKSRML----YQIACTMCSTCCNPVP---SPPPPPPSP 65

Query: 68  PPSI---NCPPPPSPPS-SGTYYYSPPPPPSQPTYTYSSSPPPP-GNYGPSGYYQPPP-- 127
           PP     NCPPPPSPPS SG+YYYSPPPP    TYTYSS PPP  GN G S YY PPP  
Sbjct: 66  PPPASTNNCPPPPSPPSPSGSYYYSPPPP---ATYTYSSPPPPQGGNGGGSYYYYPPPAD 125

Query: 128 YSNYPAPPPPNPIVPYFPFYFHTPPPGSAAAG-RLTNSWACSVLTVPLFLFLLAL 175
           Y NYPAPPPPNPIVPYFPFY+++PPP S +A  +LT+S++ S     + + LL+L
Sbjct: 126 YKNYPAPPPPNPIVPYFPFYYYSPPPPSMSASLKLTSSFSYSTSVAVVMMVLLSL 169

[Close]
BLAST of Cp4.1LG03g11530 vs. TrEMBL
Match: V4S724_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005954mg PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.9e-27
Identity = 85/143 (59.44%), Postives = 96/143 (67.13%), Query Frame = 1 

Query: 34  TLAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPP--------SINCPPPPSPPSS--- 93
           T   AKYQIECTMCS+CDNPC    SPPPP PSPPP        S NCPPPPSPPSS   
Sbjct: 33  TTTTAKYQIECTMCSSCDNPCQPDPSPPPPSPSPPPPSPPPASSSPNCPPPPSPPSSSGG 92

Query: 94  ---GTYYYSPPPPPSQPTYTYSSSPPPP-----GNYGPSGYYQPPP-YSNYPAPPPPNPI 153
              G+YYYS PPPPS P+ +YSS PPP      GN G  G Y PPP   NYP PPPPNPI
Sbjct: 93  GSGGSYYYS-PPPPSSPSSSYSSPPPPSNGNGNGNGGIGGLYFPPPNRGNYPTPPPPNPI 152

Query: 154 VPYFPFYFHTPPPGSAAAGRLTN 157
           VPYFP+Y+++PPP S ++   T+
Sbjct: 153 VPYFPYYYYSPPPPSKSSSSPTS 174

[Close]
BLAST of Cp4.1LG03g11530 vs. TAIR10
Match: AT5G49280.1 (AT5G49280.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 117.5 bits (293), Expect = 8.4e-27
Identity = 80/138 (57.97%), Postives = 90/138 (65.22%), Query Frame = 1 

Query: 42  IECTMCSACDNPCGQYLSPPPPPPSPPPSIN---CPPPPSPPSSG---TYYYSPPPPPSQ 101
           + CTMCS+CDNPC    S PPPP  PPPS     CPPPPSPPSSG   +YYY   PPPSQ
Sbjct: 31  VSCTMCSSCDNPCSPVQSSPPPPSPPPPSTPTTACPPPPSPPSSGGGSSYYY---PPPSQ 90

Query: 102 PTYTYSSSPPPPGNYGPSGYYQPPPYS-NYPAPPPPNPIVPYFPFYFHTPPPGSAAAGRL 161
                 S  PPP   G  GYY PPPYS NYP PPPPNPIVPYFPFY+HTPPPGS  + R 
Sbjct: 91  SGG--GSKYPPPYGGGGQGYYYPPPYSGNYPTPPPPNPIVPYFPFYYHTPPPGS-GSDRF 150

Query: 162 TNSWACSVLTVPLFLFLL 173
            +S++       +FL L+
Sbjct: 151 MSSYSIIFALFAVFLCLV 162

[Close]
BLAST of Cp4.1LG03g11530 vs. TAIR10
Match: AT3G06750.1 (AT3G06750.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-21
Identity = 69/126 (54.76%), Postives = 78/126 (61.90%), Query Frame = 1 

Query: 42  IECTMCSACDNPCGQYLSPPPPPPSPPPSINCPPPPSPPSSGTYYYSPPPPPSQPTYTYS 101
           + CTMCS+CDNPC    +P P   SPPP    PPP S    G+YYYSPPPP S     Y 
Sbjct: 30  VSCTMCSSCDNPC----NPVPSSYSPPP----PPPSSSGGGGSYYYSPPPPSSSGGVKY- 89

Query: 102 SSPPPPGNYGPSGYYQPPPYSNYPAPPPPNPIVPYFPFYFHTPPPGSAAAGRLTNSWACS 161
             PPP G  G  GYY PP Y NY  PPPPNPIVPYFPFY+HTPP G + + RL NS   +
Sbjct: 90  --PPPYGGDGYGGYYPPPYYGNYGTPPPPNPIVPYFPFYYHTPPQGYSGSARLQNSLLFA 144

Query: 162 VLTVPL 168
           +  V L
Sbjct: 150 LFAVLL 144

[Close]
BLAST of Cp4.1LG03g11530 vs. TAIR10
Match: AT4G16140.1 (AT4G16140.1 proline-rich family protein)

HSP 1 Score: 95.5 bits (236), Expect = 3.4e-20
Identity = 68/127 (53.54%), Postives = 76/127 (59.84%), Query Frame = 1 

Query: 34  TLAGAKYQIECTMCSACDNPCGQYLSPPPPP--PSPPP----SINCPPPPSPPSSGTYYY 93
           TL       +CTMC++CDNPC    SPPPPP  PSPPP    +  CPPPPS    G YYY
Sbjct: 21  TLTSPSQIADCTMCTSCDNPCQPNPSPPPPPSNPSPPPPSPTTTACPPPPSSSGGGPYYY 80

Query: 94  SPPPPPSQPTYTYSSSPPPPGNYGPSGYYQPPPYS--NYPAPPPPNPIVPYFPFYFHTPP 153
            PP   S      S  PPP  + G  GYY PPP S  NYP  PPPNPIVPYFPFY++ PP
Sbjct: 81  YPPASQSG-----SYRPPPSSSSG--GYYYPPPKSGGNYPYTPPPNPIVPYFPFYYYNPP 140

[Close]
BLAST of Cp4.1LG03g11530 vs. TAIR10
Match: AT4G13340.1 (AT4G13340.1 Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 50.8 bits (120), Expect = 9.7e-07
Identity = 48/104 (46.15%), Postives = 52/104 (50.00%), Query Frame = 1 

Query: 53  PCGQYLSPP----PPPPSPPPSINCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSSPPPPG 112
           P   + +PP    PPPPSPPP +  PPPP PP    Y   PPPPP  P   YS  PPPP 
Sbjct: 413 PAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPP 472

Query: 113 NYGPSGYYQPPPYSNYP------APPPPNPIVPYFPFYFHTPPP 147
              P   Y PPP S  P      +PPPP P  P  P Y   PPP
Sbjct: 473 PPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPP 516

[Close]
BLAST of Cp4.1LG03g11530 vs. TAIR10
Match: AT3G22800.1 (AT3G22800.1 Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 47.8 bits (112), Expect = 8.2e-06
Identity = 47/105 (44.76%), Postives = 53/105 (50.48%), Query Frame = 1 

Query: 43  ECTMCSACDNPCGQY-LSPPPPPPSPPPSINCPPPPSPPSSGTYYYSPPPPPSQPTYTYS 102
           EC   S+    C  +  SPP PPP PPP    PPPP PP        PPPPP  P Y Y 
Sbjct: 358 ECKSFSSYPIDCASFGCSPPSPPPPPPPPPPPPPPPPPPP------PPPPPPPPPPYVYP 417

Query: 103 SSPPPPGNYGPSGYYQPPPYSNYPAPPPPNPIVPYFPFYFHTPPP 147
           S PPPP +  P  Y  PPP   Y  PPPP+P     P+ +  PPP
Sbjct: 418 SPPPPPPS--PPPYVYPPPPPPYVYPPPPSP-----PYVYPPPPP 449

[Close]
BLAST of Cp4.1LG03g11530 vs. NCBI nr
Match: gi|659076896|ref|XP_008438921.1| (PREDICTED: extensin-like [Cucumis melo])

HSP 1 Score: 255.4 bits (651), Expect = 7.3e-65
Identity = 140/177 (79.10%), Postives = 150/177 (84.75%), Query Frame = 1 

Query: 1   METAISLKLFISLTAVLLSFPAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSP 60
           ME  ISL++ ISLT +LL    G SSLP    R+ AGAKYQIECTMCSACDNPCGQYLSP
Sbjct: 1   MEAPISLQILISLTPLLLLLLPGTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSP 60

Query: 61  PPPPPSPPPSINCPPPPSPPSSGTY-YYSPPPPPSQPTYTYSSSPPPPGNYGPSGYYQPP 120
           PPPPPSPPP +NCPPPPSPP+SGTY YYSPPPPP+QPTYTYSS PPP G  GP GYYQPP
Sbjct: 61  PPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYTYSSPPPPRGIIGPGGYYQPP 120

Query: 121 PYSNYPAPPPPNPIVPYFPFYFHTPPPGSAAA-GRLTNSWACSVLTVPLFLFLLALF 176
           PY+NYPAPPPPNPIVPYFPFY+HTPPPGS+AA GRLTNS  CSVLTV LF FLL LF
Sbjct: 121 PYNNYPAPPPPNPIVPYFPFYYHTPPPGSSAAVGRLTNSLPCSVLTVALFSFLLVLF 177

[Close]
BLAST of Cp4.1LG03g11530 vs. NCBI nr
Match: gi|700202013|gb|KGN57146.1| (Nutrient reservoir [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 9.6e-65
Identity = 139/176 (78.98%), Postives = 149/176 (84.66%), Query Frame = 1 

Query: 1   METAISLKLFISLTAVLLSFPAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSP 60
           MET I L+  ISLTA+LL FP+G SSLP    R+ AGAKYQIECTMCSACDNPC QYLSP
Sbjct: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60

Query: 61  PPPPPSPPPSINCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSSPPPPGNYGPSGYYQPPP 120
           PPPPPSPPP +NCPPPPSPPSSGTY Y  PPPP+QP+YTYSS PPP G  GP GYYQPPP
Sbjct: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFYFHTPPPGSAAA-GRLTNSWACSVLTVPLFLFLLALF 176
           YSNYPAPPPPNPIVPYFPF++HTPPPGS+AA  RLTNS  CSVLTV LF FLLALF
Sbjct: 121 YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLALF 176

[Close]
BLAST of Cp4.1LG03g11530 vs. NCBI nr
Match: gi|359477137|ref|XP_002271531.2| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Vitis vinifera])

HSP 1 Score: 155.2 bits (391), Expect = 1.0e-34
Identity = 101/160 (63.12%), Postives = 113/160 (70.62%), Query Frame = 1 

Query: 5   ISLKLFISLTAVLL--SFPAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSPPP 64
           + + LF+++  V+   S+PA      TAD    A +KYQIECTMCSACDNPC Q  SPPP
Sbjct: 7   VRMLLFVAVFMVVQRQSWPA------TAD--VAAKSKYQIECTMCSACDNPCNQVPSPPP 66

Query: 65  PPPSPPP--------SINCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSSPPPPGNY---- 124
           P PSPPP        S NCPPPPSPPS+ TYYYSPPPP SQPTY YSS PPPP  Y    
Sbjct: 67  PNPSPPPPSPPPPSSSSNCPPPPSPPSNPTYYYSPPPP-SQPTYVYSS-PPPPNGYNGGG 126

Query: 125 GPSGYYQPPPYSNYPAPPPPNPIVPYFPFYFHTPPPGSAA 151
           G  G + PPPY NYPAPPPPNPIVPYFPF++HTPPP SAA
Sbjct: 127 GGGGAFYPPPYQNYPAPPPPNPIVPYFPFWYHTPPPTSAA 156

[Close]
BLAST of Cp4.1LG03g11530 vs. NCBI nr
Match: gi|1009163439|ref|XP_015899970.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Ziziphus jujuba])

HSP 1 Score: 140.6 bits (353), Expect = 2.6e-30
Identity = 96/179 (53.63%), Postives = 112/179 (62.57%), Query Frame = 1 

Query: 6   SLKLFISLTAVLLSFPAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSPPPPPP 65
           +L+L + ++ +LL  P    S+ +         KYQI CTMCSAC+NPCG   SPPPP P
Sbjct: 4   TLRLSVCISILLLILPVAKPSVTS---------KYQIACTMCSACENPCGSVPSPPPPSP 63

Query: 66  SPPP---SINCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSSPPPP-----GNYGPSGYYQ 125
           SPPP   S  CPPPPS PSSGT Y S PPPPSQPTYTY S PPP      G  G   YY 
Sbjct: 64  SPPPPASSTICPPPPSSPSSGTVYNS-PPPPSQPTYTYYSPPPPQSPSGGGGGGGGAYYP 123

Query: 126 PPPYSNYPAPPPPNPIVPYFPFYFHTPPPGSAAAG-RLTNSWACSVLTVPLFLFLLALF 176
           PPPY NYP PPPPNPIVPYFPFY+++PPP S ++  RL  +   S     +   L ALF
Sbjct: 124 PPPYKNYPTPPPPNPIVPYFPFYYYSPPPPSISSSIRLMITTTSSSPVYIIIFTLTALF 172

[Close]
BLAST of Cp4.1LG03g11530 vs. NCBI nr
Match: gi|802700677|ref|XP_012083797.1| (PREDICTED: leucine-rich repeat extensin-like protein 1 [Jatropha curcas])

HSP 1 Score: 139.8 bits (351), Expect = 4.5e-30
Identity = 98/178 (55.06%), Postives = 117/178 (65.73%), Query Frame = 1 

Query: 12  SLTAVLLSFPAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSPPPPPP------ 71
           +L +V + F   FS   TA   T   +K QI CTMCSACDNPC Q L PPPPPP      
Sbjct: 6   TLFSVFILFLVNFSL--TASTITPTSSKDQISCTMCSACDNPC-QPLPPPPPPPVSECPP 65

Query: 72  ---SPPPSI--NCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSSPPPPGNYGPSG-YYQPP 131
               PPP++  +CPPPP  PSSGTYYYSPPPPPS+PTY Y SSPPPP N G SG +Y PP
Sbjct: 66  PPSPPPPAVVSDCPPPPVTPSSGTYYYSPPPPPSEPTYIY-SSPPPPENSGDSGEFYPPP 125

Query: 132 PYSNYPAPPPPNPIVPYFPFYFHTPPPGSAA--AGRLTNSWACSVLTVPLFLFLLALF 176
            Y NY APPPPNPI+PYFPFY++ PPP S A  + RL   +    + + +FLF+  +F
Sbjct: 126 NYGNYAAPPPPNPILPYFPFYYYNPPPSSFASQSARLEMHFP---IALSIFLFVSFIF 176

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g11530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g11530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAN7_CUCSA6.7e-6578.98Nutrient reservoir OS=Cucumis sativus GN=Csa_3G165630 PE=4 SV=1[more]
F6H6U0_VITVI7.2e-3563.13Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01460 PE=4 SV=... [more]
A0A067JWJ5_JATCU3.1e-3055.06Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13988 PE=4 SV=1[more]
B9RZK7_RICCO3.5e-2957.71Nutrient reservoir, putative OS=Ricinus communis GN=RCOM_0999350 PE=4 SV=1[more]
V4S724_9ROSI1.9e-2759.44Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005954mg PE=4 SV=1[more]
BLAST of Cp4.1LG03g11530 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G49280.18.4e-2757.97 hydroxyproline-rich glycoprotein family protein[more]
AT3G06750.11.1e-2154.76 hydroxyproline-rich glycoprotein family protein[more]
AT4G16140.13.4e-2053.54 proline-rich family protein[more]
AT4G13340.19.7e-0746.15 Leucine-rich repeat (LRR) family protein[more]
AT3G22800.18.2e-0644.76 Leucine-rich repeat (LRR) family protein[more]
BLAST of Cp4.1LG03g11530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076896|ref|XP_008438921.1|7.3e-6579.10PREDICTED: extensin-like [Cucumis melo][more]
gi|700202013|gb|KGN57146.1|9.6e-6578.98Nutrient reservoir [Cucumis sativus][more]
gi|359477137|ref|XP_002271531.2|1.0e-3463.13PREDICTED: leucine-rich repeat extensin-like protein 3 [Vitis vinifera][more]
gi|1009163439|ref|XP_015899970.1|2.6e-3053.63PREDICTED: leucine-rich repeat extensin-like protein 3 [Ziziphus jujuba][more]
gi|802700677|ref|XP_012083797.1|4.5e-3055.06PREDICTED: leucine-rich repeat extensin-like protein 1 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g11530.1Cp4.1LG03g11530.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 89..105
score: 5.8E-12coord: 56..77
score: 5.8E-12coord: 115..132
score: 5.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g11530Cucsa.252740Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g11530CmoCh14G016340Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g11530Cla021772Watermelon (97103) v1cpewmB613
Cp4.1LG03g11530Csa3G165630Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g11530CSPI03G14790Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g11530Lsi05G015720Bottle gourd (USVL1VR-Ls)cpelsiB512
Cp4.1LG03g11530MELO3C006695.2Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g11530CsaV3_3G014990Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g11530Bhi01G000757Wax gourdcpewgoB0783
Cp4.1LG03g11530CsGy3G014910Cucumber (Gy14) v2cgybcpeB406
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g11530Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG03g11530Cucurbita pepo (Zucchini)cpecpeB337
Cp4.1LG03g11530Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG03g11530Cucurbita maxima (Rimu)cmacpeB006
Cp4.1LG03g11530Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g11530Cucurbita maxima (Rimu)cmacpeB403
Cp4.1LG03g11530Cucurbita maxima (Rimu)cmacpeB837
Cp4.1LG03g11530Cucurbita maxima (Rimu)cmacpeB928
Cp4.1LG03g11530Cucurbita moschata (Rifu)cmocpeB365
Cp4.1LG03g11530Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g11530Cucurbita moschata (Rifu)cmocpeB862
Cp4.1LG03g11530Wild cucumber (PI 183967)cpecpiB628
Cp4.1LG03g11530Cucumber (Chinese Long) v2cpecuB625
Cp4.1LG03g11530Bottle gourd (USVL1VR-Ls)cpelsiB484
Cp4.1LG03g11530Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g11530Watermelon (Charleston Gray)cpewcgB562
Cp4.1LG03g11530Watermelon (97103) v1cpewmB623
Cp4.1LG03g11530Melon (DHL92) v3.5.1cpemeB555
Cp4.1LG03g11530Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g11530Cucumber (Gy14) v2cgybcpeB828
Cp4.1LG03g11530Melon (DHL92) v3.6.1cpemedB659
Cp4.1LG03g11530Silver-seed gourdcarcpeB0106
Cp4.1LG03g11530Silver-seed gourdcarcpeB0395
Cp4.1LG03g11530Silver-seed gourdcarcpeB0986
Cp4.1LG03g11530Silver-seed gourdcarcpeB1320
Cp4.1LG03g11530Cucumber (Chinese Long) v3cpecucB0780
Cp4.1LG03g11530Wax gourdcpewgoB0766