Cp4.1LG03g09710 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAATGGAACAAAAGCAAGACAAGATCCGGTGGTAACCGACAGTTTATGAGCAACGAATTTAACGAACACCCGCCACTGCGACCCACAGATGGCTCTTCCCTTCTCCTATCTATCCAATCCCGACCGTCCGATTCCACGCCATTATTCGATATCACTGTTCACCAATCACACCCAAGTAAACGCCTTCCCCTCTGTTTCAGTTAATTGCTTTTTTTCGCGATCTGGACAACTCACCCTTTCATCGGAAGGTCACGATTTGAGTTAAATTTTGGTTCCGTTATGTTATATGTAACCTCCCCCTTTTTTTTTTCTTCAATTTTTCTTTTTGGGTTTTGGAGGGGATTTTATTTTCTTGGGAGTTCTATCTGTTCTTCGTAGCTTTGTTTGGTTAAAGTTTTAGATCGGGGGTTTTACTTTTTTGAGACGGGTTTTTTGTTGGGGTTGCTGGGCTCATAAATTTTGAACCCGTGAGCGTTGACCCAGTTGCGGAATCTCAGTTTTGAGTCGCTGAATTGTGTTCTTATTATATTGGGGGTTTTACAAAAAGTGGATTTCTGAGATGGTTCGATTTAGAAATCCAAAATCTAGGTCGGTTTTTTGGGGTTGTTTATAGGGCAAATTTCCGATTGGATTTATACTGCGAGTTTCAAGGTATGGGCGGCGATTCTAGGGCTGTTAATGGCTACGATGAGAGGTCTGTGGACTCTGCGGCGGCGGGAGAAGTTGGCGATCATAGAAACGGCGAAGATGACAGTGAATCGAATGCTCTATTGCCGCCGCGGCGCGGCGGAATGTCGAGGAAATCGAATAAGCCGAGGATGAAAGTCCGGTGGAATGACAGTAATGGTAATAACCTAGCGGAGATTTTGGAGTTTCAACCGAGGTAGCTTAATTGTTTTCCCCTTTTCTTGGAGCATTTTGATGGTTTTTTTGGTCTGTTTTCTGTAATTCTGTTCTTGTTCTTGTTCTTACATTTCTGTTGATATTTGAACTTGAGATGTTTGAAGAAGCTGAAAGTTTCCATATCTGGGTTAGAACCAAAAATGCTGGCTGATCTGTTCTTTGGGTTATTCTAGTTCTTCGATTGAAGAACCCAATCTAAACATAGCTCAGTTGATAAAACACTAATGACGAATAGTTAGAACAGGCTTGAATCGAGGGATATGATGCTTGAATGTTTTGTATTGTGACATCATTAGCTGTTTTCATCTTAGACTGAAGTTAAGAACATGTTTTAAGGTAGATGAAATCTGTGTTTGAATGTAATGGATGATGCTGTGGATTGAGTATATCTTTGTTTTTAGATTTGTAAAATTTGGATTGGTTTTTGTGTCTGTTCGTTCTGCAGCGACGTGAGCGATTCCGGGGACGAGGAGTCTGATTCTTGCAGCTGTATGATTATGTAGATTATTACATCAAATATTAGTGTATGACGACGAGAACAATGTCGTTTCTTTACGACGAAACTGATAATAATTGGCAATGTTTCTGACTGTATAACGGATTGCTTTGGTACTACGACGACTGATAGAAGAGTTCAAAGATCGACTGATTAATATGTCGTTTCGTTACGCCTTGTGGTTTCTGGCGATGTGTCGGAGTTGTTTTTCGAATTTGTAAGATCACCTTCCTGGTGATATGATGTATGGATGATGCTGATATTGACATTATGAAATCACAGATTAGTTGAGCTTTTGACAGTGCAGAATGATGTATTATGTAATGCAAACACTTTGGAATTTTTTTTTTTCTATATCTATCATTGTTAATGA TTAATGGAACAAAAGCAAGACAAGATCCGGTGGTAACCGACAGTTTATGAGCAACGAATTTAACGAACACCCGCCACTGCGACCCACAGATGGCTCTTCCCTTCTCCTATCTATCCAATCCCGACCGTCCGATTCCACGCCATTATTCGATATCACTGTTCACCAATCACACCCAAGTAAACGCCTTCCCCTCTGTTTCAGTTAATTGCTTTTTTTCGCGATCTGGACAACTCACCCTTTCATCGGAAGGTCACGATTTGAGTTAAATTTTGGTTCCGTTATGTTATATGTAACCTCCCCCTTTTTTTTTTCTTCAATTTTTCTTTTTGGGTTTTGGAGGGGATTTTATTTTCTTGGGAGTTCTATCTGTTCTTCGTAGCTTTGTTTGGTTAAAGTTTTAGATCGGGGGTTTTACTTTTTTGAGACGGGTTTTTTGTTGGGGTTGCTGGGCTCATAAATTTTGAACCCGTGAGCGTTGACCCAGTTGCGGAATCTCAGTTTTGAGTCGCTGAATTGTGTTCTTATTATATTGGGGGTTTTACAAAAAGTGGATTTCTGAGATGGTTCGATTTAGAAATCCAAAATCTAGGTCGGTTTTTTGGGGTTGTTTATAGGGCAAATTTCCGATTGGATTTATACTGCGAGTTTCAAGGTATGGGCGGCGATTCTAGGGCTGTTAATGGCTACGATGAGAGGTCTGTGGACTCTGCGGCGGCGGGAGAAGTTGGCGATCATAGAAACGGCGAAGATGACAGTGAATCGAATGCTCTATTGCCGCCGCGGCGCGGCGGAATGTCGAGGAAATCGAATAAGCCGAGGATGAAAGTCCGGTGGAATGACAGTAATGGTAATAACCTAGCGGAGATTTTGGAGTTTCAACCGAGCGACGTGAGCGATTCCGGGGACGAGGAGTCTGATTCTTGCAGCTGTATGATTATGTAGATTATTACATCAAATATTAGTGTATGACGACGAGAACAATGTCGTTTCTTTACGACGAAACTGATAATAATTGGCAATGTTTCTGACTGTATAACGGATTGCTTTGGTACTACGACGACTGATAGAAGAGTTCAAAGATCGACTGATTAATATGTCGTTTCGTTACGCCTTGTGGTTTCTGGCGATGTGTCGGAGTTGTTTTTCGAATTTGTAAGATCACCTTCCTGGTGATATGATGTATGGATGATGCTGATATTGACATTATGAAATCACAGATTAGTTGAGCTTTTGACAGTGCAGAATGATGTATTATGTAATGCAAACACTTTGGAATTTTTTTTTTTCTATATCTATCATTGTTAATGA ATGGGCGGCGATTCTAGGGCTGTTAATGGCTACGATGAGAGGTCTGTGGACTCTGCGGCGGCGGGAGAAGTTGGCGATCATAGAAACGGCGAAGATGACAGTGAATCGAATGCTCTATTGCCGCCGCGGCGCGGCGGAATGTCGAGGAAATCGAATAAGCCGAGGATGAAAGTCCGGTGGAATGACAGTAATGGTAATAACCTAGCGGAGATTTTGGAGTTTCAACCGAGCGACGTGAGCGATTCCGGGGACGAGGAGTCTGATTCTTGCAGCTGTATGATTATGTAG MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
BLAST of Cp4.1LG03g09710 vs. TrEMBL
Match: A0A0A0L701_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134730 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 4.6e-36 Identity = 80/93 (86.02%), Postives = 87/93 (93.55%), Query Frame = 1
BLAST of Cp4.1LG03g09710 vs. TrEMBL
Match: A0A061EME1_THECC (Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 OS=Theobroma cacao GN=TCM_020968 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.9e-22 Identity = 54/92 (58.70%), Postives = 73/92 (79.35%), Query Frame = 1
BLAST of Cp4.1LG03g09710 vs. TrEMBL
Match: K7LJ92_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G136600 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.2e-21 Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1
BLAST of Cp4.1LG03g09710 vs. TrEMBL
Match: A0A0B2SPA6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_044611 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.2e-21 Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1
BLAST of Cp4.1LG03g09710 vs. TrEMBL
Match: A0A0B2QZ08_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_028738 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 4.2e-21 Identity = 60/97 (61.86%), Postives = 69/97 (71.13%), Query Frame = 1
BLAST of Cp4.1LG03g09710 vs. TAIR10
Match: AT2G33390.1 (AT2G33390.1 unknown protein) HSP 1 Score: 90.1 bits (222), Expect = 7.8e-19 Identity = 44/93 (47.31%), Postives = 67/93 (72.04%), Query Frame = 1
BLAST of Cp4.1LG03g09710 vs. NCBI nr
Match: gi|449432518|ref|XP_004134046.1| (PREDICTED: uncharacterized protein LOC101205158 [Cucumis sativus]) HSP 1 Score: 158.3 bits (399), Expect = 6.6e-36 Identity = 80/93 (86.02%), Postives = 87/93 (93.55%), Query Frame = 1
BLAST of Cp4.1LG03g09710 vs. NCBI nr
Match: gi|659076053|ref|XP_008438475.1| (PREDICTED: uncharacterized protein LOC103483558 isoform X2 [Cucumis melo]) HSP 1 Score: 152.1 bits (383), Expect = 4.8e-34 Identity = 78/91 (85.71%), Postives = 84/91 (92.31%), Query Frame = 1
BLAST of Cp4.1LG03g09710 vs. NCBI nr
Match: gi|659076051|ref|XP_008438474.1| (PREDICTED: uncharacterized protein LOC103483558 isoform X1 [Cucumis melo]) HSP 1 Score: 126.3 bits (316), Expect = 2.8e-26 Identity = 64/76 (84.21%), Postives = 69/76 (90.79%), Query Frame = 1
BLAST of Cp4.1LG03g09710 vs. NCBI nr
Match: gi|590659807|ref|XP_007035229.1| (Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 [Theobroma cacao]) HSP 1 Score: 112.5 bits (280), Expect = 4.2e-22 Identity = 54/92 (58.70%), Postives = 73/92 (79.35%), Query Frame = 1
BLAST of Cp4.1LG03g09710 vs. NCBI nr
Match: gi|645235204|ref|XP_008224162.1| (PREDICTED: uncharacterized protein LOC103323918 [Prunus mume]) HSP 1 Score: 109.8 bits (273), Expect = 2.7e-21 Identity = 54/89 (60.67%), Postives = 69/89 (77.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |