Cucsa.255690 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATATTATGAAACACCCACTTTTTATTTTTTAATTTTGAAGATCTTTTCGATTTGGGTTTTGGTGTGGACTTGAGTTTCTGTCACTGTCTTTGGAATCTATCTATTCTAATCCCTTCTTTTTTTTGTTTTGTTCATAGCTTTGTTTGCCTGAAATTTTAGATCGGGGGTTTTACTTTCCGAGAAGGGGTTTTTTTTTATGGGGTTGTTGGGTTCATAAGTTTTTGAACCCGTGAGCGTTGACCCAGTTGTGAAATCGGAGTTTCGAGTGAGAATTTTTCATTGGGGGTTCAGATGAATTGGATTTCTGAGATGAGTCGATTCAGAAATCGCAAATCTGGGTCCGATTTTTGGTGTAGTTGATAGGGTAAAATTTCGATTGGATTTGTAGTTAGTGAGAGTTTTGAACTATGGATATTGGCGATTCTAAGGATGTTAATGGCTGTAAAGAGAAGACTATGGACTCTGCAGCTGCCGGAGAAGTTGGGGATCACAGTAACGGCGAAGAATACAGTGAATCGAATGCCCTATTGCCGCCGCGCCGCGGTGGAATGTCGAGGAAATTGAATAAGCCGAGGATGAAAGTTCGGTGGAATGATAGTAATGGTAATAACCTAGCAGAGATTTTGGAGTTTCAACCAAGGTAGCTAAAATGTCTTTTTTTCCCTTTTTGGTTGCATTTTGATGGTCTTTTTGGGCATGTTTTTTTGTTGTTTAGGGAAGATGGGTTCACCGTTCTTGTTCTCTTTTTTACGTTTAGAGCATTAGAATCTGGGACTCAGAGTCGCCGTTTATATTTGAACTTGAGATGTTGAAGAAGCTGTAAGTTTCCATATTTGGGAACCGACACTCTGGATTTGGAACTTTGGAACTTTGGAACTTGAGTTTACCTCTTTTCAGTCTTCTTCTAGAAATCCTGTTTTGTAATATGCTGCCTCATGGATAGAGCTGATCTCTTCTTTTGGCTTTTTCTAGTTCATTGATGACATTTGATTGCTAGGACAACACAATTTCAAGCATAGCTTAGTTGAAAGAGCACTAATTATCCTTTCAAAAGTTGATGGTTCGATTCCCACCTCTCTATTTGTTAAGCTCAAAAAGAAAATCAATCGTCAGAACAACGGAC TATATTATGAAACACCCACTTTTTATTTTTTAATTTTGAAGATCTTTTCGATTTGGGTTTTGGTGTGGACTTGAGTTTCTGTCACTGTCTTTGGAATCTATCTATTCTAATCCCTTCTTTTTTTTGTTTTGTTCATAGCTTTGTTTGCCTGAAATTTTAGATCGGGGGTTTTACTTTCCGAGAAGGGGTTTTTTTTTATGGGGTTGTTGGGTTCATAAGTTTTTGAACCCGTGAGCGTTGACCCAGTTGTGAAATCGGAGTTTCGAGTGAGAATTTTTCATTGGGGGTTCAGATGAATTGGATTTCTGAGATGAGTCGATTCAGAAATCGCAAATCTGGGTCCGATTTTTGGTGTAGTTGATAGGGTAAAATTTCGATTGGATTTGTAGTTAGTGAGAGTTTTGAACTATGGATATTGGCGATTCTAAGGATGTTAATGGCTGTAAAGAGAAGACTATGGACTCTGCAGCTGCCGGAGAAGTTGGGGATCACAGTAACGGCGAAGAATACAGTGAATCGAATGCCCTATTGCCGCCGCGCCGCGGTGGAATGTCGAGGAAATTGAATAAGCCGAGGATGAAAGTTCGGTGGAATGATAGTAATGGTAATAACCTAGCAGAGATTTTGGAGTTTCAACCAAGTTCATTGATGACATTTGATTGCTAGGACAACACAATttcaagcatagcttagttgaaagagcactaattatcctttcaaaagttgatggttcgattcccacctctctatttgttaagctcaaaaaGAAAATCAATCGTCAGAACAACGGAC ATGGATATTGGCGATTCTAAGGATGTTAATGGCTGTAAAGAGAAGACTATGGACTCTGCAGCTGCCGGAGAAGTTGGGGATCACAGTAACGGCGAAGAATACAGTGAATCGAATGCCCTATTGCCGCCGCGCCGCGGTGGAATGTCGAGGAAATTGAATAAGCCGAGGATGAAAGTTCGGTGGAATGATAGTAATGGTAATAACCTAGCAGAGATTTTGGAGTTTCAACCAAGTTCATTGATGACATTTGATTGCTAG MDIGDSKDVNGCKEKTMDSAAAGEVGDHSNGEEYSESNALLPPRRGGMSRKLNKPRMKVRWNDSNGNNLAEILEFQPSSLMTFDC*
BLAST of Cucsa.255690 vs. TrEMBL
Match: A0A0A0L701_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134730 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 1.1e-48 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1
BLAST of Cucsa.255690 vs. TrEMBL
Match: A0A061EME1_THECC (Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 OS=Theobroma cacao GN=TCM_020968 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 4.0e-27 Identity = 58/92 (63.04%), Postives = 74/92 (80.43%), Query Frame = 1
BLAST of Cucsa.255690 vs. TrEMBL
Match: K7LJ92_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G136600 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 3.8e-25 Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1
BLAST of Cucsa.255690 vs. TrEMBL
Match: A0A0B2SPA6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_044611 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 3.8e-25 Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1
BLAST of Cucsa.255690 vs. TrEMBL
Match: A0A0B2QZ08_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_028738 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 8.4e-25 Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1
BLAST of Cucsa.255690 vs. TAIR10
Match: AT2G33390.1 (AT2G33390.1 unknown protein) HSP 1 Score: 104.0 bits (258), Expect = 5.3e-23 Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 1
BLAST of Cucsa.255690 vs. NCBI nr
Match: gi|449432518|ref|XP_004134046.1| (PREDICTED: uncharacterized protein LOC101205158 [Cucumis sativus]) HSP 1 Score: 200.3 bits (508), Expect = 1.6e-48 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1
BLAST of Cucsa.255690 vs. NCBI nr
Match: gi|659076053|ref|XP_008438475.1| (PREDICTED: uncharacterized protein LOC103483558 isoform X2 [Cucumis melo]) HSP 1 Score: 186.0 bits (471), Expect = 3.0e-44 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 1
BLAST of Cucsa.255690 vs. NCBI nr
Match: gi|659076051|ref|XP_008438474.1| (PREDICTED: uncharacterized protein LOC103483558 isoform X1 [Cucumis melo]) HSP 1 Score: 156.4 bits (394), Expect = 2.6e-35 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1
BLAST of Cucsa.255690 vs. NCBI nr
Match: gi|590659807|ref|XP_007035229.1| (Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 [Theobroma cacao]) HSP 1 Score: 128.6 bits (322), Expect = 5.8e-27 Identity = 58/92 (63.04%), Postives = 74/92 (80.43%), Query Frame = 1
BLAST of Cucsa.255690 vs. NCBI nr
Match: gi|694352938|ref|XP_009357995.1| (PREDICTED: uncharacterized protein LOC103948674 [Pyrus x bretschneideri]) HSP 1 Score: 126.3 bits (316), Expect = 2.9e-26 Identity = 61/96 (63.54%), Postives = 73/96 (76.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |