Cp4.1LG08g03250 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAGTAAACGCCTTCTTGTATCGTTGTTTTAATTCCTTCTCCGATCTCGACAGCGCACCGCTCCATCGCCCATTTTCTCTTTGGGGTTTGGAGGCGATTTTATTTTCTGTCACTTTCTCGGGAATCTTTCGATTCTAAGCCTTATTTTCTTTGTTTGGTTCAAATTTTAGATCGAGGGGTTTTTGATGGGGTTGTTGGGTTCGTAAATCTTGAACCCATGAGCCCTAACTCGGTTCTGGATTTGTGATTTTTGCGATGATTCGGTTCAGAAATCTCAAATTTGGGTTTGATTTTTGATCTTTGGTGAACTATGGGTGGCGATTCTAAGGATGTTGAGGAGACTGTGGATTCTGTGGCTGCCGGAGAAGTTGGGGATTCCGGTAAAGGCGAAGATTACAGTGAATCGAATGCTCTATTGCCGCCCCGGCGTGGCGGAATGTCGAGGAAATCGAATAAGCCGAGGATGAAAGTCCGGTGGACTGATAGTAATGGTAATAATCTAGCGGAGATTTTGGAGTTTCAACCGAGGTAGCTTGATTGGTTTCCTTTTATGTTGGTTTTTTTTGGTATGTTTTATGTTGTTTGGGGAAGATGGGCTGTCTGTCATGCTGTCTGTCATGCTGTCTTATGCTGTCTTATGAGCTGAAATGATCTGTTCTTTGCTTGTTCTTCGTGAAATCGCTCGTTTAGAATGACTTTTTAAGTGCTTAAACGCTTAGAAAATGAGTTGAAATAAGTCTTTAGTTTGATGTCATGAGCTTAACGAGATGGGGTCGATTTTGAATTCGGTGTCTTTGCGTGTTTTTGCAGCGATGTGAGCGACTCGGGGGACGAGGAGGATGATTCTTGCAGCTGTATAATTATGTAGATTATTACATCAAATATGTGTATAATGACAGGAAGCTGAGAGTCATTGGTGGTATTTCTGACTGTATACTGATTGCCTTACTACGACGACGAGTTCTCGAAGATTGACGGGTTAATATGTCGATATTCCTTGCGGTGTTTGGTGATGTGTGTTCAGGGATATCTTGTACTGTTTTGGTTTTCGAGTTTGTAAGATCATATCGATGATGCGAATAATGATGTTATTATAACAAATATTCAGATTAGTTGAGCGTTGTACTATTGTTTATACCTCTAGATCTTGAGAGGTCGTGAACGTTTTTGTTTGGTTTAATAACAAATTTAGTCGATTCGTAAAAAGTTAGAATTTAGTCCCTAAAGTTTTAAATGTCATAATTAGTCTTTAAACTATACT CAAAGTAAACGCCTTCTTGTATCGTTGTTTTAATTCCTTCTCCGATCTCGACAGCGCACCGCTCCATCGCCCATTTTCTCTTTGGGGTTTGGAGGCGATTTTATTTTCTGTCACTTTCTCGGGAATCTTTCGATTCTAAGCCTTATTTTCTTTGTTTGGTTCAAATTTTAGATCGAGGGGTTTTTGATGGGGTTGTTGGGTTCGTAAATCTTGAACCCATGAGCCCTAACTCGGTTCTGGATTTGTGATTTTTGCGATGATTCGGTTCAGAAATCTCAAATTTGGGTTTGATTTTTGATCTTTGGTGAACTATGGGTGGCGATTCTAAGGATGTTGAGGAGACTGTGGATTCTGTGGCTGCCGGAGAAGTTGGGGATTCCGGTAAAGGCGAAGATTACAGTGAATCGAATGCTCTATTGCCGCCCCGGCGTGGCGGAATGTCGAGGAAATCGAATAAGCCGAGGATGAAAGTCCGGTGGACTGATAGTAATGGTAATAATCTAGCGGAGATTTTGGAGTTTCAACCGAGCGATGTGAGCGACTCGGGGGACGAGGAGGATGATTCTTGCAGCTGTATAATTATGTAGATTATTACATCAAATATGTGTATAATGACAGGAAGCTGAGAGTCATTGGTGGTATTTCTGACTGTATACTGATTGCCTTACTACGACGACGAGTTCTCGAAGATTGACGGGTTAATATGTCGATATTCCTTGCGGTGTTTGGTGATGTGTGTTCAGGGATATCTTGTACTGTTTTGGTTTTCGAGTTTGTAAGATCATATCGATGATGCGAATAATGATGTTATTATAACAAATATTCAGATTAGTTGAGCGTTGTACTATTGTTTATACCTCTAGATCTTGAGAGGTCGTGAACGTTTTTGTTTGGTTTAATAACAAATTTAGTCGATTCGTAAAAAGTTAGAATTTAGTCCCTAAAGTTTTAAATGTCATAATTAGTCTTTAAACTATACT ATGGGTGGCGATTCTAAGGATGTTGAGGAGACTGTGGATTCTGTGGCTGCCGGAGAAGTTGGGGATTCCGGTAAAGGCGAAGATTACAGTGAATCGAATGCTCTATTGCCGCCCCGGCGTGGCGGAATGTCGAGGAAATCGAATAAGCCGAGGATGAAAGTCCGGTGGACTGATAGTAATGGTAATAATCTAGCGGAGATTTTGGAGTTTCAACCGAGCGATGTGAGCGACTCGGGGGACGAGGAGGATGATTCTTGCAGCTGTATAATTATGTAG MGGDSKDVEETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
BLAST of Cp4.1LG08g03250 vs. TrEMBL
Match: A0A0A0L701_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134730 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 7.1e-34 Identity = 79/93 (84.95%), Postives = 82/93 (88.17%), Query Frame = 1
BLAST of Cp4.1LG08g03250 vs. TrEMBL
Match: A0A061EME1_THECC (Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 OS=Theobroma cacao GN=TCM_020968 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.3e-19 Identity = 52/92 (56.52%), Postives = 68/92 (73.91%), Query Frame = 1
BLAST of Cp4.1LG08g03250 vs. TrEMBL
Match: V7BMK7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G271300g PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.2e-18 Identity = 53/98 (54.08%), Postives = 67/98 (68.37%), Query Frame = 1
BLAST of Cp4.1LG08g03250 vs. TrEMBL
Match: A0A0B2QZ08_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_028738 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 5.4e-18 Identity = 49/78 (62.82%), Postives = 58/78 (74.36%), Query Frame = 1
BLAST of Cp4.1LG08g03250 vs. TrEMBL
Match: K7LJ92_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G136600 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 9.3e-18 Identity = 53/97 (54.64%), Postives = 64/97 (65.98%), Query Frame = 1
BLAST of Cp4.1LG08g03250 vs. TAIR10
Match: AT2G33390.1 (AT2G33390.1 unknown protein) HSP 1 Score: 79.3 bits (194), Expect = 1.3e-15 Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 1
BLAST of Cp4.1LG08g03250 vs. NCBI nr
Match: gi|449432518|ref|XP_004134046.1| (PREDICTED: uncharacterized protein LOC101205158 [Cucumis sativus]) HSP 1 Score: 151.0 bits (380), Expect = 1.0e-33 Identity = 79/93 (84.95%), Postives = 82/93 (88.17%), Query Frame = 1
BLAST of Cp4.1LG08g03250 vs. NCBI nr
Match: gi|659076053|ref|XP_008438475.1| (PREDICTED: uncharacterized protein LOC103483558 isoform X2 [Cucumis melo]) HSP 1 Score: 143.3 bits (360), Expect = 2.1e-31 Identity = 76/91 (83.52%), Postives = 79/91 (86.81%), Query Frame = 1
BLAST of Cp4.1LG08g03250 vs. NCBI nr
Match: gi|659076051|ref|XP_008438474.1| (PREDICTED: uncharacterized protein LOC103483558 isoform X1 [Cucumis melo]) HSP 1 Score: 118.6 bits (296), Expect = 5.6e-24 Identity = 62/76 (81.58%), Postives = 65/76 (85.53%), Query Frame = 1
BLAST of Cp4.1LG08g03250 vs. NCBI nr
Match: gi|590659807|ref|XP_007035229.1| (Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 [Theobroma cacao]) HSP 1 Score: 103.6 bits (257), Expect = 1.9e-19 Identity = 52/92 (56.52%), Postives = 68/92 (73.91%), Query Frame = 1
BLAST of Cp4.1LG08g03250 vs. NCBI nr
Match: gi|645235204|ref|XP_008224162.1| (PREDICTED: uncharacterized protein LOC103323918 [Prunus mume]) HSP 1 Score: 101.7 bits (252), Expect = 7.1e-19 Identity = 54/89 (60.67%), Postives = 65/89 (73.03%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |