Cp4.1LG03g05790 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g05790
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	Cp4.1LG03 : 4574406 .. 4579285 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCCCGCTTTGCGGCTGGAAGAATCTCTCGCGTTTCTCCTTCTCCCGCTACATTCTACAGAGAGGGAAGAACAACAAAAAAAACGCACAAACTTTGCTTCTCTCGATCCATTTTCGCTACAAATAATCTGTTGTTTGTTGATTTGGGTTACTGAAACTATCAAATTTTCTTTGAAATGTTAATGGAATTATAAGAACACTCCATCTCTTGCTTCCTCTTTCAAAAATCAGCAGCAGGAGGAAAAGAAGGCTCATATTGTTTGTTTCTTCTATCGCACTAATTCTATTCCCATTTTCGTAAGCATCTGTGTTTCCTCTTTTTCTCTTGCATTTAATCTTAGTTCGTCTGCTGTTCATAAGTTTTTGTCTGCAATGTGTTTGTTCATTTGCTAATCATGTTGGTAGCTGTTTGAAGGTTGCTGCCATTCTCTCTTTTTCTGCATTTTCGTTAATTTTAGGCTTTTTCTCGATCTGGATTGCTGTTTTCTTGAATTTCTTCGGGTTTGGTTTCTGAGTTTTCTTTTTGTTTGGTTTATACCATTTAATCGTATTGATTTAGTCTTGCTTGGCTTTTGATGTTTTGAGTTGTCATTTTCTCTTACATTCCTACATTTTTGCAAGATTTTTGTAACATCTTTCGTTCGATTGCTGCTAAAACTCGGTTAGTTTAACTATGAATAATGAGTTCAAACGTCTGAATCTGTTCAGAGGTCTTAGGAACTAAGTTTTGGGGGCAAAATCGTTGCAGTTTGTTCATAGTCCATAGGGCTCTTCCTACTAATTCTTGAGGAGGCTTTGCCTGTTAGAAGACCAATCTCCAGGGATGATAAGTATTTTAGAGTATTAAGTTTTCAAAATCAAGGTTGGAACCTTTAACTAAATCGAGTTGACTAAATTGTTCTTAGAGCATTGATGTAACTTTTTGAGTATCAGTGAAATGTCTCTTTTTTTCCTCCTAAAAGAGACAAAAAGGATAACTGTAAGGAGCGTTTGGTTTTTCATGGCTCATTTAACATTCAAATTTTTGTTCCCCTTCTCTTTTCTCCTGCAACTTATGATTATTTATCTTCAGGTGAATTCAATGATTCTTTCCTCTTCTTTTTATTTTTATTTTTAATTTTTAAAGAACTGGGGAATCAGGATTTCATTCCTTGCATACTCATGGCCCACTTCATTGATCTTCGAGAAGCTTTGCCCACCCCAAAGCCAACTTTAGAAAACAACAAGGATTTCAAATTAGTAATTTTTTCACCTAGGAATTGGACTCATGTTTTTTGAGGATATATGTAACGGCCCAAGCCCAAGCCCACCGCTAGCCGATATTGTCCTTTTTGGGATTTTCCTTTCGGGTTTCTCCTCAAGGTTTTTAAAACGCGTATGCTAGGGAGAAGTTTCCACACCCTTGTAAAGAATGCTTCGTTCTCCTCCTCAACCGATGTGGGATCTCACAATCCACCCCCCTTCAGGGCTCAGCGTCCTCGTTGGCACTCGTTCCGTTCTCCAATCGATTCGTTGTAGGACCCAATCTCCTTGTTGGCACACTGCCTTGTGTCCACTTCCCTTCGGGGCTCAGTCTCCTCACTAGCACATCACCTAGTGTCTGGCTCTGATACCATTTGTGACAACCCAAGTCCACCGCTAGCAGATATTGTCCTTTTTGGGCTTTCTCTTTCGGGCTTCCGCTCAAGTTTTTTAAAATGCGTATGCTAGGGAGAAGTTTCCACCCTTTATAAAGAATGCTTCGTTCTCCTTCCCAACCGAGATGGAATCTCACAATATCTTCTGACATCCCAATTCTAAGGACCTTACCAGTCACACCATCACCCCATGGGTTGTAAACTCCTAAAGTTTCAAAATTTCTATTCTTTCTTTATTTTCTGCTAGATCTTTGAATTATACTATGCTGAGAAACAATCTGAATTGTCATGGATGTTGTTCACTGCAGTAAACAAAATTGGTCTACATAGTTGTAAATGTTGTTTGGCTTATTTTATATGATTTTATTGACATTCATTCATTCCAATGTTTACTGGGTCATTGAAGAATGGGGGAACATTTTGTGCTGTTGGTAGATCAGTTGCTCACAGAATCAAACCTCGAAGCTACTATTGAGAGAAAAAACAGAAATTGTCGTCCTATGGCCTCAACGAGTGCAGATAACATGATATCTTCCTTAAATATTGATGTTGAATTCATGTCACCTTCAAGTAAACTTGTTCAGTGCAGAATTTGTCATGATGAGGACGATGAATCAAAAATGGAGACACCATGCTCTTGCTGTGGAAGCTTGAAGGTTAGATTTGGTATACTCAACACCAATTAGTGCTACTTAATCAATAAAACTCAGATAGCTTTTCTTTGAATCCCTCGTTTCCAAATTATGACTGACTAAACTGGTTTCAACAATGTTCCTGTCGATATTTTCTGCACGTTTCCAAATTATATGACTGACTAAACTGTTTTCAACAATGTTCCTATCGATATTTTCTGCATTTAGTTTCGGTCCAACTTTATCCTTTCCCCCAAATCTTTGCCCCGGATGTTATAATATGCTATAAACACTTGCTAAGTCAGGTCCCTTGGTTTATATTTACTTGTTGCTAGACTGAAAAATGTTAGAATCAGATTCATATCTTTATTCCTCACTGTGTTCGTTTAGATGGTTCACCTTGATAATTAGCTTCCAGTTAGTGTTGATAATTGCAGTATGCTCATCGCAAGTGCGTTCAGCGGTGGTGCAACGAGAAAGGCAATACAATCTGTGAAATTTGCCACCAGGTCTGTTGTTTTTGTTCAAATAAATGAAAATTTCTTTAATACATGACTAACTTTATGGTCGTAAGAAGTCGTTTTACTTATACTGCAGGACTTTGAGCCAGGGTATACAGCACCACTCCCTGTATTATATTATGGAGATATTACTTCACCAGTTCATTTCAGGTAAACCATTTACCTCTCTCCCCACAATGCAAGTTTCTCTAGTTTGCATTGTATATTCACTTATTGTTCGTTTATTTTCTCGACACTATTGATATAACATCGCTGTCGTCGAATTGTGTTCTTAGGGAAAGTTGGGAGATGTCTAGACTGAACCTGCATGTACCTGCAGGAATGCCTGATCACGAGTATCCTGATTCTGACTTTGATGAATTCTTCACTCCTTCTCCAAGAAGCATATTGTGCTGCCGCATGGTTGCAGTAACTGTATTCCCTACCTCTTCATTTTACTTCATTTCCAGTTTCCTTATTTCTGTAAACAAATTTACATTGATTGATAATTGGCTTTGCCTTCTGCACATAAAAAAAGTATTAAATGTTCTTGCTCGTTGATTCTTTTTCATTCACTTGTGAAGGGAGGAAAGCAAACATAGTTTTTGGTTTAAGTTCGAGCATTCGTTCTTATAAGATTTTATTTTAGTCTTTGAACTTTCTATTAAGACTTTGAACATTCGTTCTTCTGCATGAACAAGTGTTTGATTCACGATTAGTAAGTTAAGTATTGGGTCTTCAAGCATCAACGAAAAGAATTTAAGTAGTCATGTAATCTAAGTTTCGGAGACGAAATAGAGTATTAGAAGTCGATGGATTAAAATTTAACGTTTTGAAGCTTAAGAATGAAAATGAAACGAGCATCAAAGTTCATATCTATAATACGATTTAAACCTGTATTCGCCATGCTCATATTTGACCAACAATCCCGAGTTTGAAACTTCTAATCGTATCTGTATGATGCAGTTCATCGTTCTTCTCGTTTTGCGCCATACGCTACCAATTGTAATCAGTGGAGCTGGAGAGTATTCATTGACATTGTTAATGGTAGGCTTGGTTTCTCTGTTTCCCTTTCTACTTTTACTTTGGCCCTCTTCCATTGTTGAGACCAATGAAGAACCATAAGTTCATGTGCTGTATGTTTCAGCTGCTGATCTTGAGAATTGTTGGAATCCTTCTACCAATCTATGTCATGGTTAGAGCATTTACTTCCATTCAACGACGGCGTCATTATCAGGTTAGTGAGGCAGTTTATGTCTGGATGATTCGTTTCGTCGTAAGAACTGCTTGGATTTTCGAAGAGGTCGATACAGAATAGATATGAATTTTGTTGGGCTATTCTGTTATACGGTGTCACATATGTAGTTGAAGTGCATATAAGGACACCCATGATCAACTTAAACGTAACTCAACTAATTAAAGCATATATCTTCGATCGATGATTGTACTGTTACCAACCATGATGAACATACGCTAGACAGTGCACATTCCTGAAAACTTGCTCTGGTTATCTTTTCTATTTGAGCTTGATGTCTAGCAGTTGTTTACATTCCCTTGATACGACGTTTGAGTATACTAGTATGCTTTTGGTAGGATCCCCGTCTTCGCCTCGCAACACCAGAGGACGAAAATGACTCGACAAACCATGCTCAATCGCGCTTCATCCACGTGAGATAGCAGTACATTCACCTCGTCTCTAATACGACGAAACCAACGTAAGCATAACGACGAGATGGAAACTGGTTGGATGTAACGCAATAGAAGGTCATCAACGCCATTCATGGTCCTTGCAGCGAGACTCGACCACGACCACTACAACAATCACGACCCAGTTATTTTCTGCAGTGAAGTTCATCATCTGTGGGAAGGCAGCTGAAACTTCTTTGGTTAAAATCAAACTTTTCATGCAATGGAATCGTTGGCTCACTTCACTCACTACTCTTTAATGTATAAAGTGTGTAATGGTTAGGAAGGGAAATCAGCATTGCTTTCATATTCGCTCTTAGAAATTATAAGATAGTTGTAATTAAATTATGTTCTTACACTGACAAACAAACTAAATTGTTGGGAAGTTTAAACTTCCACCTTCATACGTCGTTGAACTCAAAATA

mRNA sequence

GCCCCCGCTTTGCGGCTGGAAGAATCTCTCGCGTTTCTCCTTCTCCCGCTACATTCTACAGAGAGGGAAGAACAACAAAAAAAACGCACAAACTTTGCTTCTCTCGATCCATTTTCGCTACAAATAATCTGTTGTTTGTTGATTTGGGTTACTGAAACTATCAAATTTTCTTTGAAATGTTAATGGAATTATAAGAACACTCCATCTCTTGCTTCCTCTTTCAAAAATCAGCAGCAGGAGGAAAAGAAGGCTCATATTGTTTGTTTCTTCTATCGCACTAATTCTATTCCCATTTTCAATGGGGGAACATTTTGTGCTGTTGGTAGATCAGTTGCTCACAGAATCAAACCTCGAAGCTACTATTGAGAGAAAAAACAGAAATTGTCGTCCTATGGCCTCAACGAGTGCAGATAACATGATATCTTCCTTAAATATTGATGTTGAATTCATGTCACCTTCAAGTAAACTTGTTCAGTGCAGAATTTGTCATGATGAGGACGATGAATCAAAAATGGAGACACCATGCTCTTGCTGTGGAAGCTTGAAGTATGCTCATCGCAAGTGCGTTCAGCGGTGGTGCAACGAGAAAGGCAATACAATCTGTGAAATTTGCCACCAGGACTTTGAGCCAGGGTATACAGCACCACTCCCTGTATTATATTATGGAGATATTACTTCACCAGTTCATTTCAGGGAAAGTTGGGAGATGTCTAGACTGAACCTGCATGTACCTGCAGGAATGCCTGATCACGAGTATCCTGATTCTGACTTTGATGAATTCTTCACTCCTTCTCCAAGAAGCATATTGTGCTGCCGCATGGTTGCAGTAACTGTATTCCCTACCTCTTCATTTTACTTCATTTCCAGTTTCCTTATTTCTTTCATCGTTCTTCTCGTTTTGCGCCATACGCTACCAATTGTAATCAGTGGAGCTGGAGAGTATTCATTGACATTGTTAATGCTGCTGATCTTGAGAATTGTTGGAATCCTTCTACCAATCTATGTCATGGTTAGAGCATTTACTTCCATTCAACGACGGCGTCATTATCAGGATCCCCGTCTTCGCCTCGCAACACCAGAGGACGAAAATGACTCGACAAACCATGCTCAATCGCGCTTCATCCACGTGAGATAGCAGTACATTCACCTCGTCTCTAATACGACGAAACCAACGTAAGCATAACGACGAGATGGAAACTGGTTGGATGTAACGCAATAGAAGGTCATCAACGCCATTCATGGTCCTTGCAGCGAGACTCGACCACGACCACTACAACAATCACGACCCAGTTATTTTCTGCAGTGAAGTTCATCATCTGTGGGAAGGCAGCTGAAACTTCTTTGGTTAAAATCAAACTTTTCATGCAATGGAATCGTTGGCTCACTTCACTCACTACTCTTTAATGTATAAAGTGTGTAATGGTTAGGAAGGGAAATCAGCATTGCTTTCATATTCGCTCTTAGAAATTATAAGATAGTTGTAATTAAATTATGTTCTTACACTGACAAACAAACTAAATTGTTGGGAAGTTTAAACTTCCACCTTCATACGTCGTTGAACTCAAAATA

Coding sequence (CDS)

ATGGGGGAACATTTTGTGCTGTTGGTAGATCAGTTGCTCACAGAATCAAACCTCGAAGCTACTATTGAGAGAAAAAACAGAAATTGTCGTCCTATGGCCTCAACGAGTGCAGATAACATGATATCTTCCTTAAATATTGATGTTGAATTCATGTCACCTTCAAGTAAACTTGTTCAGTGCAGAATTTGTCATGATGAGGACGATGAATCAAAAATGGAGACACCATGCTCTTGCTGTGGAAGCTTGAAGTATGCTCATCGCAAGTGCGTTCAGCGGTGGTGCAACGAGAAAGGCAATACAATCTGTGAAATTTGCCACCAGGACTTTGAGCCAGGGTATACAGCACCACTCCCTGTATTATATTATGGAGATATTACTTCACCAGTTCATTTCAGGGAAAGTTGGGAGATGTCTAGACTGAACCTGCATGTACCTGCAGGAATGCCTGATCACGAGTATCCTGATTCTGACTTTGATGAATTCTTCACTCCTTCTCCAAGAAGCATATTGTGCTGCCGCATGGTTGCAGTAACTGTATTCCCTACCTCTTCATTTTACTTCATTTCCAGTTTCCTTATTTCTTTCATCGTTCTTCTCGTTTTGCGCCATACGCTACCAATTGTAATCAGTGGAGCTGGAGAGTATTCATTGACATTGTTAATGCTGCTGATCTTGAGAATTGTTGGAATCCTTCTACCAATCTATGTCATGGTTAGAGCATTTACTTCCATTCAACGACGGCGTCATTATCAGGATCCCCGTCTTCGCCTCGCAACACCAGAGGACGAAAATGACTCGACAAACCATGCTCAATCGCGCTTCATCCACGTGAGATAG

Protein sequence

MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVLYYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTVFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLRLATPEDENDSTNHAQSRFIHVR

Homology

[Close]

BLAST of Cp4.1LG03g05790 vs. Swiss-Prot
Match: MARH3_HUMAN (E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 23/76 (30.26%), Postives = 39/76 (51.32%), Query Frame = 1


Query: 34  STSADNMISSLNIDVEFMSPSSKLVQCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRW 93
           S     ++S++   +   SP +    CRICH+   +  + +PC C G+L   HR C++ W
Sbjct: 45  SAKDGQLLSTVVRTLATQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHW 104

Query: 94  CNEKGNTICEICHQDF 110
            +    + CE+CH  F
Sbjct: 105 LSSSNTSYCELCHFRF 120

[Close]

BLAST of Cp4.1LG03g05790 vs. Swiss-Prot
Match: MARH3_BOVIN (E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 23/76 (30.26%), Postives = 39/76 (51.32%), Query Frame = 1


Query: 34  STSADNMISSLNIDVEFMSPSSKLVQCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRW 93
           S     ++S++   +   SP +    CRICH+   +  + +PC C G+L   HR C++ W
Sbjct: 45  SAKDGQLLSTVVRTLATQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHW 104

Query: 94  CNEKGNTICEICHQDF 110
            +    + CE+CH  F
Sbjct: 105 LSSSNTSYCELCHFRF 120

[Close]

BLAST of Cp4.1LG03g05790 vs. Swiss-Prot
Match: MARH3_RAT (E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus GN=March3 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 23/76 (30.26%), Postives = 39/76 (51.32%), Query Frame = 1


Query: 34  STSADNMISSLNIDVEFMSPSSKLVQCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRW 93
           S     ++S++   +   SP +    CRICH+   +  + +PC C G+L   HR C++ W
Sbjct: 45  SAKDGQLLSTVVRTLATQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHW 104

Query: 94  CNEKGNTICEICHQDF 110
            +    + CE+CH  F
Sbjct: 105 LSSSNTSYCELCHFRF 120

[Close]

BLAST of Cp4.1LG03g05790 vs. Swiss-Prot
Match: MARH3_MOUSE (E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 23/76 (30.26%), Postives = 39/76 (51.32%), Query Frame = 1


Query: 34  STSADNMISSLNIDVEFMSPSSKLVQCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRW 93
           S     ++S++   +   SP +    CRICH+   +  + +PC C G+L   HR C++ W
Sbjct: 45  SAKDGQLLSTVVRTLATQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHW 104

Query: 94  CNEKGNTICEICHQDF 110
            +    + CE+CH  F
Sbjct: 105 LSSSNTSYCELCHFRF 120

[Close]

BLAST of Cp4.1LG03g05790 vs. Swiss-Prot
Match: MARH2_XENLA (E3 ubiquitin-protein ligase MARCH2 OS=Xenopus laevis GN=march2 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 18/50 (36.00%), Postives = 32/50 (64.00%), Query Frame = 1


Query: 60  CRICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDF 110
           CRICH+  +  ++ +PC C G+L   H+ C+++W +    + CE+CH +F
Sbjct: 64  CRICHEGGNGERLLSPCDCTGTLGTVHKTCLEKWLSSSNTSYCELCHTEF 113

[Close]

BLAST of Cp4.1LG03g05790 vs. TrEMBL
Match: A0A0A0LBM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G186720 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 7.0e-117
Identity = 218/280 (77.86%), Postives = 235/280 (83.93%), Query Frame = 1


Query: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSA--DNMISSLNIDVEFMSPSSKLV 60
           MG+HF LLVDQLLTESNLEATIERKNR C PMAST+A  DNMISS NIDVE +SPSS +V
Sbjct: 1   MGDHFGLLVDQLLTESNLEATIERKNRICHPMASTNANADNMISSSNIDVESVSPSS-IV 60

Query: 61  QCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLP 120
           QCRICHDEDD SKMETPCSCCGSLKYAHRKC+QRWCNEKG+TICEICHQDF+PGYT+P P
Sbjct: 61  QCRICHDEDDGSKMETPCSCCGSLKYAHRKCIQRWCNEKGDTICEICHQDFKPGYTSPPP 120

Query: 121 VLYYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVT 180
           V YYGDI SP+HFR SWEMSRLNLHVPAGMPDHEY DSDFD+FF PSPRSILCCR+VAV 
Sbjct: 121 VFYYGDINSPIHFRGSWEMSRLNLHVPAGMPDHEYLDSDFDDFFAPSPRSILCCRVVAVI 180

Query: 181 VFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMV 240
                           FI LLVLRHTLPIVISGAG YS TLLMLLILRIVGILLPIYVMV
Sbjct: 181 ----------------FIALLVLRHTLPIVISGAGGYSWTLLMLLILRIVGILLPIYVMV 240

Query: 241 RAFTSIQRRRHYQDPRLRLATPEDENDSTNHAQSRFIHVR 279
           +AFT IQRR  YQ PRL+L T  D ++STNH+QS  IH+R
Sbjct: 241 KAFTYIQRRHRYQAPRLQLTTLGDNSESTNHSQSHLIHLR 263

[Close]

BLAST of Cp4.1LG03g05790 vs. TrEMBL
Match: A0A067JFQ8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02514 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 4.1e-85
Identity = 166/285 (58.25%), Postives = 208/285 (72.98%), Query Frame = 1


Query: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNM--ISSLNIDVEFMSPSSKLV 60
           MG+HFVLLVD+LLTES LEA IER +   +   S S D     S   +D++F S SSKLV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIERNSHWQQATRSASGDTTTDFSPDRMDLDFRSSSSKLV 60

Query: 61  QCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLP 120
           +CRICHDED++  ME PCSCCGSLKYAHRKCVQRWCNEKG+T+CEICHQ F+PGYTAP P
Sbjct: 61  ECRICHDEDEDMNMEVPCSCCGSLKYAHRKCVQRWCNEKGDTVCEICHQQFKPGYTAPPP 120

Query: 121 VLYYGDITSPVHFRESWEMSRLNLHVPAGMP----DHEYPDSDFDEFFTPSPRSILCCRM 180
           + +YG I  P++FR +WE++R +L+ P  +     D ++  SDF+++  PSPRS++CCR+
Sbjct: 121 LFHYGGI--PMNFRGNWEITRRDLNNPGFIAMVTTDRDFVGSDFEDYSAPSPRSLMCCRI 180

Query: 181 VAVTVFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPI 240
           VA+                 F+VLLVLRHTLPI+ISGAG+YS TL MLLILR +GILLPI
Sbjct: 181 VAII----------------FMVLLVLRHTLPIIISGAGDYSTTLFMLLILRTIGILLPI 240

Query: 241 YVMVRAFTSIQRRRHYQDPRLRLATPEDENDSTN-HAQSRFIHVR 279
           YVMV+AFT+IQRRRH QDPR  LA  + EN+      QSRF+H+R
Sbjct: 241 YVMVKAFTAIQRRRHQQDPRFSLAASDGENELPQLQPQSRFVHIR 267

[Close]

BLAST of Cp4.1LG03g05790 vs. TrEMBL
Match: A0A061EGA0_THECC (RING/FYVE/PHD zinc finger superfamily protein OS=Theobroma cacao GN=TCM_019300 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.5e-82
Identity = 164/283 (57.95%), Postives = 207/283 (73.14%), Query Frame = 1


Query: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMI--SSLNIDVEFMSPSSKLV 60
           MG+HFVLLVD+LLTES LEA IE KN++ + M+S S D+MI  SS  +D    S  SKLV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESKNQSQQGMSSASKDDMIEFSSHRMDENVGSSPSKLV 60

Query: 61  QCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLP 120
           +CRICHDED++  ME PCSC GSLKYAHRKCVQRWCNEKG+TICEICHQ F PGYTAP P
Sbjct: 61  ECRICHDEDEDLNMEIPCSCRGSLKYAHRKCVQRWCNEKGDTICEICHQQFRPGYTAPPP 120

Query: 121 VLYYGDITSPVHFRESWEMSRLNLHVPAGMP----DHEYPDSDFDEFFTPSPRSILCCRM 180
           + +YG +  P++FR +WE+SR +L  P  +     D ++ +SDFD++  PS RS++CCR+
Sbjct: 121 LFHYGGV--PMNFRGNWEISRRDLPAPRFITMVTTDRDFLESDFDDYSAPSSRSLICCRV 180

Query: 181 VAVTVFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPI 240
           +A+                 F+VLLVLRHTLPI+ISGAG+YSLTL  LL+LR VGILLPI
Sbjct: 181 IAII----------------FMVLLVLRHTLPIIISGAGDYSLTLFTLLMLRTVGILLPI 240

Query: 241 YVMVRAFTSIQRRRHYQDPRLRLATPEDEND--STNHAQSRFI 276
           Y+MV+AFT+IQRRRH+QDPR  LA  ++E++        SRFI
Sbjct: 241 YIMVKAFTAIQRRRHHQDPRFSLAASDEESELPQLQQPHSRFI 265

[Close]

BLAST of Cp4.1LG03g05790 vs. TrEMBL
Match: B9H350_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09240g PE=4 SV=2)

HSP 1 Score: 311.6 bits (797), Expect = 9.6e-82
Identity = 165/285 (57.89%), Postives = 202/285 (70.88%), Query Frame = 1


Query: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNM--ISSLNIDVEFMSPSSKLV 60
           MG+HFV LVD+LLTES LEA IE +NR  + MAS S +N    S   +D+E  S + K V
Sbjct: 1   MGDHFVFLVDRLLTESTLEAAIESQNRLRQTMASASKENTKEFSPHWMDLELTSLAGKSV 60

Query: 61  QCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLP 120
           +CRICH+E+D+  ME PCSC GSLKYAHRKCVQRWCNEKGNTICEICHQ FEPGYTAP P
Sbjct: 61  ECRICHEEEDDMNMEMPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQQFEPGYTAPPP 120

Query: 121 VLYYGDITSPVHFRESWEMSRLNLHVPAGMP----DHEYPDSDFDEFFTPSPRSILCCRM 180
           +  YG I  P++FR +WE+ R +LH P  +     DHE+ DSDFDE+  PSPRS++CCR+
Sbjct: 121 LFCYGAI--PMNFRGNWEIPRRDLHNPPSIAMVTTDHEFLDSDFDEYSAPSPRSVMCCRI 180

Query: 181 VAVTVFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPI 240
           +A+                 F+VLLVLRHTL I+ISGAG+YS+TL MLLILR VGILLP+
Sbjct: 181 IAII----------------FMVLLVLRHTLAILISGAGDYSMTLFMLLILRTVGILLPV 240

Query: 241 YVMVRAFTSIQRRRHYQDPRLRLATPEDENDSTN-HAQSRFIHVR 279
           YVMVRAFT+IQ R   QDP   LA  ++EN+       SR IH++
Sbjct: 241 YVMVRAFTAIQHRGRQQDPHFPLAESDEENELPQLQTHSRIIHIQ 267

[Close]

BLAST of Cp4.1LG03g05790 vs. TrEMBL
Match: M5WTM7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010144mg PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 4.7e-81
Identity = 167/283 (59.01%), Postives = 200/283 (70.67%), Query Frame = 1


Query: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 60
           MG+HFVL VD+L+TES LEA IE   +   P  + S D M SS  IDV   S SSK VQC
Sbjct: 1   MGDHFVLFVDRLITESTLEAVIESTYQLQHPTLTASQDTMDSSHKIDVNGSS-SSKFVQC 60

Query: 61  RICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 120
           RICHDEDD+S METPCSCCGSLKYAHRKCVQRWCNEKG+TICEICHQ F P YTAP P+ 
Sbjct: 61  RICHDEDDDSNMETPCSCCGSLKYAHRKCVQRWCNEKGDTICEICHQQFTPDYTAPPPLF 120

Query: 121 YYGDITSPVHFRESWEMSRLNLHVPAGMP----DHEYPDSDFD-EFFTPSPRSILCCRMV 180
           +Y  I  P++FR +WE+SR +L  P  +     DHEY ++DFD E+  PS RS++CCR+V
Sbjct: 121 HYSGI--PMNFRGNWEISRRDLQNPQFIAMVTADHEYMNTDFDDEYSAPSSRSLICCRVV 180

Query: 181 AVTVFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIY 240
           A+                 F+VLLVLRHTLP +ISGAGEYSLTL  LL+LR +GIL PIY
Sbjct: 181 AII----------------FMVLLVLRHTLPFLISGAGEYSLTLFTLLMLRTIGILFPIY 240

Query: 241 VMVRAFTSIQRRRHYQDPRLRLATPEDENDSTNHAQSRFIHVR 279
           +MVRAFT+IQR+R  QDP + LAT ++END      SR I +R
Sbjct: 241 IMVRAFTAIQRQRRQQDPEISLATSDEENDLA--YPSRLIQIR 262

[Close]

BLAST of Cp4.1LG03g05790 vs. TAIR10
Match: AT2G01275.1 (AT2G01275.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 205.7 bits (522), Expect = 3.7e-53
Identity = 121/286 (42.31%), Postives = 167/286 (58.39%), Query Frame = 1


Query: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 60
           MG+HFVLLVD+L+TES +EA I+ +N+  +         ++    +++   +    + +C
Sbjct: 1   MGDHFVLLVDRLITESTIEAAIQSRNQMLQANIPVEECTILDDKTLEM-LRNGDLSMAEC 60

Query: 61  RICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 120
           RICHDED +S METPCSC GS+KYAHR+CVQRWCNEKG+T CEICHQ+F+P YTAP P+L
Sbjct: 61  RICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAPPPLL 120

Query: 121 YYGDITSPVHFRESWEMS----RLNLHVPAGMP--DHEYPDSDFDEFFTPSPRSILCCRM 180
             G +  P+HFR +W +S    R    VPA     D  YP S        S  S +CCR 
Sbjct: 121 ELGHV--PLHFRGNWGISQREHRFITVVPADSTFIDQPYPLS--------STTSFICCR- 180

Query: 181 VAVTVFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPI 240
                          S ++ F+ LL+LRHTLP+V++G+  +   L  LL LRI+GI+LPI
Sbjct: 181 ---------------SLVLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPI 240

Query: 241 YVMVRAFTSIQRRRHYQDPRLRLATPEDENDSTN--HAQSRFIHVR 279
           YV+ +A  + +R     D      + ++E DS      QS  I VR
Sbjct: 241 YVVTKAVATCRRHSRTLDTSPSDDSSDEETDSWRLPQTQSYIIGVR 259

[Close]

BLAST of Cp4.1LG03g05790 vs. TAIR10
Match: AT5G38070.1 (AT5G38070.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 198.7 bits (504), Expect = 4.6e-51
Identity = 110/264 (41.67%), Postives = 165/264 (62.50%), Query Frame = 1


Query: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMA-STSADNMISSLNIDVEFMSPSSKLVQ 60
           MG+H VL+VD+L ++S L  T+ R +    P A S + D +  S++   +     SK VQ
Sbjct: 1   MGDHLVLVVDRLSSDSGL-GTVNRAD----PKADSVNEDGVSESISAGADLCE--SKFVQ 60

Query: 61  CRICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPV 120
           CRICHDED+++ M+TPCSC G+LK+AH  CVQRWCNEKG+T+CEIC Q ++PGYTAP  +
Sbjct: 61  CRICHDEDEDTNMDTPCSCSGTLKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYTAPRQL 120

Query: 121 LYYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTV 180
            +Y  I+  ++F   W +  L+L  P  +   +  D D D +   SP S++CCR++A   
Sbjct: 121 FHYTGIS--MNFGSDWGIEGLDLRNPYFLTWGD-ADDDHDLYSFHSPTSLICCRLIA--- 180

Query: 181 FPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVR 240
                        + F++LL LRH+LP+++ G  ++S+TLLML ++R +GILL  YV  +
Sbjct: 181 -------------LLFVLLLFLRHSLPVLLGGVDDFSITLLMLPLVRTLGILLIAYVFFK 238

Query: 241 AFTSIQRRRHYQDPRLRLATPEDE 264
           +F  IQR R  +D RL   + ++E
Sbjct: 241 SFIVIQRCRQERDTRLSGFSSDEE 238

[Close]

BLAST of Cp4.1LG03g05790 vs. TAIR10
Match: AT3G47550.3 (AT3G47550.3 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-32
Identity = 89/267 (33.33%), Postives = 133/267 (49.81%), Query Frame = 1


Query: 1   MGEHFVLLVDQLLTESNLEATIERKNR---NCRPMASTSADNMISSLNIDVEFMS----- 60
           M +H  L  D+L+T  +L++  +  +    + RP  +  A + ++   +  E+ +     
Sbjct: 1   MADHLSLCTDRLITSESLDSEKDSDSSGESSYRPQGTDLASSSVNETEVPREYYAVADEE 60

Query: 61  -PSSKLVQCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEP 120
            P  + V+CRIC +ED    +E PC+C GSLKYAHRKCVQRWCNEKG+  CEICHQ ++ 
Sbjct: 61  EPLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQH 120

Query: 121 GYTAPLPVLYYGDITSPVHFRESWEMS-RLNLHVP----AGMPDHEYPDSDFDEFFTPSP 180
           GYTAP P      I   +H  + WE    L+L  P        +  + ++D+DE+   + 
Sbjct: 121 GYTAPPPPPPDETI---IHIGDDWENGVPLDLTDPRILAMAAAERHFLEADYDEYSENNS 180

Query: 181 RSILCCRMVAVTVFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLT-LLMLLIL 240
                CR  A+ +                + LL+LR  L +  +   E   T    L +L
Sbjct: 181 SGAAFCRSAALIL----------------MALLLLRDALNLTTNPDDEDDPTAFFSLFLL 240

Query: 241 RIVGILLPIYVMVRAFTSIQRRRHYQD 253
           R  G LLP Y+M  A   +QRRR  Q+
Sbjct: 241 RAAGFLLPCYIMAWAIGILQRRRQRQE 248

[Close]

BLAST of Cp4.1LG03g05790 vs. TAIR10
Match: AT1G02610.1 (AT1G02610.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 136.0 bits (341), Expect = 3.6e-32
Identity = 79/205 (38.54%), Postives = 109/205 (53.17%), Query Frame = 1


Query: 55  SKLVQCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYT 114
           S   +CRICH+E+ ES  E PCSC G++K+AHR C+QRWC+EKGNTICEIC Q+++PGYT
Sbjct: 15  SSFNRCRICHEEEAESYFEAPCSCSGTIKFAHRDCIQRWCDEKGNTICEICLQEYKPGYT 74

Query: 115 APLPVLYYGDITSPVHFRESWEMSRLNLHVPAGMPDHEY--------PDSDFDEFFTPSP 174
                      + P  F E+    R NLH+                  +SDF E  +   
Sbjct: 75  TT---------SKPSRFIETAVTIRDNLHIMRRENGRRRRNRRLVNREESDFQECNSGVD 134

Query: 175 RSILCCRMVAVTVFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLTLLMLLILR 234
           R   CCR +A+                 F V+L+++H    V  G  EY  T+  +L L+
Sbjct: 135 RGASCCRYLALI----------------FSVILLIKHAFDAVY-GTEEYPYTIFTVLTLK 193

Query: 235 IVGILLPIYVMVRAFTSIQRRRHYQ 252
            +GILLP+ V++R  T+IQR   YQ
Sbjct: 195 AIGILLPMLVIIRTITAIQRSLRYQ 193

[Close]

BLAST of Cp4.1LG03g05790 vs. TAIR10
Match: AT5G62460.1 (AT5G62460.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 135.6 bits (340), Expect = 4.8e-32
Identity = 79/208 (37.98%), Postives = 110/208 (52.88%), Query Frame = 1


Query: 53  PSSKLVQCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPG 112
           P  + V+CRIC +ED    +E+PCSC GSLKYAHRKCVQRWCNEKG+T CEICH+ ++PG
Sbjct: 71  PLIQSVECRICQEEDSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEICHKSYQPG 130

Query: 113 YTAPLPVLYYGDITSPVHFRESWEMS-RLNLHVP----AGMPDHEYPDSDFDEFFTPSPR 172
           YTAP P      I   +   E W     L+L+ P        +  + D+D+DE+   +  
Sbjct: 131 YTAPPPPPADDTI---IDIGEDWGNGVHLDLNDPRILAMAAAERHFFDADYDEYADSNSS 190

Query: 173 SILCCRMVAVTVFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYS---LTLLMLLI 232
               CR  A+ +                + LL+LRH L +  + + +          L +
Sbjct: 191 GAAFCRSAALIL----------------MALLLLRHALNLTNNNSDDEEDDPSAFFFLFM 250

Query: 233 LRIVGILLPIYVMVRAFTSIQRRRHYQD 253
           LR  G LLP Y+M  A + +QRRR  Q+
Sbjct: 251 LRAAGFLLPCYIMAWAISILQRRRQRQE 259

[Close]

BLAST of Cp4.1LG03g05790 vs. NCBI nr
Match: gi|778679853|ref|XP_004140823.2| (PREDICTED: E3 ubiquitin-protein ligase MARCH2-like [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 1.0e-116
Identity = 218/280 (77.86%), Postives = 235/280 (83.93%), Query Frame = 1


Query: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSA--DNMISSLNIDVEFMSPSSKLV 60
           MG+HF LLVDQLLTESNLEATIERKNR C PMAST+A  DNMISS NIDVE +SPSS +V
Sbjct: 1   MGDHFGLLVDQLLTESNLEATIERKNRICHPMASTNANADNMISSSNIDVESVSPSS-IV 60

Query: 61  QCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLP 120
           QCRICHDEDD SKMETPCSCCGSLKYAHRKC+QRWCNEKG+TICEICHQDF+PGYT+P P
Sbjct: 61  QCRICHDEDDGSKMETPCSCCGSLKYAHRKCIQRWCNEKGDTICEICHQDFKPGYTSPPP 120

Query: 121 VLYYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVT 180
           V YYGDI SP+HFR SWEMSRLNLHVPAGMPDHEY DSDFD+FF PSPRSILCCR+VAV 
Sbjct: 121 VFYYGDINSPIHFRGSWEMSRLNLHVPAGMPDHEYLDSDFDDFFAPSPRSILCCRVVAVI 180

Query: 181 VFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMV 240
                           FI LLVLRHTLPIVISGAG YS TLLMLLILRIVGILLPIYVMV
Sbjct: 181 ----------------FIALLVLRHTLPIVISGAGGYSWTLLMLLILRIVGILLPIYVMV 240

Query: 241 RAFTSIQRRRHYQDPRLRLATPEDENDSTNHAQSRFIHVR 279
           +AFT IQRR  YQ PRL+L T  D ++STNH+QS  IH+R
Sbjct: 241 KAFTYIQRRHRYQAPRLQLTTLGDNSESTNHSQSHLIHLR 263

[Close]

BLAST of Cp4.1LG03g05790 vs. NCBI nr
Match: gi|1009128326|ref|XP_015881170.1| (PREDICTED: uncharacterized protein LOC107417121 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 332.8 bits (852), Expect = 5.8e-88
Identity = 175/282 (62.06%), Postives = 210/282 (74.47%), Query Frame = 1


Query: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 60
           MG+HFVLLVD+LLTES LEA IE K+ + +P  S S DNMISS  IDV   SP  KLV+C
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESKSWSQQPTISKSQDNMISSHKIDVNMRSPC-KLVEC 60

Query: 61  RICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 120
           RICHDED+ S METPCSCCGSLKYAHRKCVQRWCNEKG+TICEIC Q F PGYTAP P+ 
Sbjct: 61  RICHDEDEASNMETPCSCCGSLKYAHRKCVQRWCNEKGDTICEICRQQFRPGYTAPPPLF 120

Query: 121 YYGDITSPVHFRESWEMSRLNLHVPAGM----PDHEYPDSDFDEFFTPSPRSILCCRMVA 180
           +YG I  P++FR +WE+SR +LH P  +     + +Y D+DFDE+  PS RS++CCR+VA
Sbjct: 121 HYGGI--PMNFRGNWEVSRRDLHNPGFIAMVSAERDYMDTDFDEYAAPSSRSLICCRIVA 180

Query: 181 VTVFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYV 240
                           I F+VLLVLRHTLPI+ISGAGEYS+TL  LL+LR +GILLP+Y+
Sbjct: 181 ----------------IIFMVLLVLRHTLPIIISGAGEYSMTLFTLLMLRTIGILLPVYI 240

Query: 241 MVRAFTSIQRRRHYQDPRLRLATPEDENDSTNHAQSRFIHVR 279
           MV+AFT+IQRRRH QD  L LAT ++ENDS    Q RFI +R
Sbjct: 241 MVKAFTAIQRRRHRQDSHLPLATSDEENDSP-LPQPRFIQIR 262

[Close]

BLAST of Cp4.1LG03g05790 vs. NCBI nr
Match: gi|802761989|ref|XP_012089929.1| (PREDICTED: uncharacterized protein LOC105648219 [Jatropha curcas])

HSP 1 Score: 322.8 bits (826), Expect = 6.0e-85
Identity = 166/285 (58.25%), Postives = 208/285 (72.98%), Query Frame = 1


Query: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNM--ISSLNIDVEFMSPSSKLV 60
           MG+HFVLLVD+LLTES LEA IER +   +   S S D     S   +D++F S SSKLV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIERNSHWQQATRSASGDTTTDFSPDRMDLDFRSSSSKLV 60

Query: 61  QCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLP 120
           +CRICHDED++  ME PCSCCGSLKYAHRKCVQRWCNEKG+T+CEICHQ F+PGYTAP P
Sbjct: 61  ECRICHDEDEDMNMEVPCSCCGSLKYAHRKCVQRWCNEKGDTVCEICHQQFKPGYTAPPP 120

Query: 121 VLYYGDITSPVHFRESWEMSRLNLHVPAGMP----DHEYPDSDFDEFFTPSPRSILCCRM 180
           + +YG I  P++FR +WE++R +L+ P  +     D ++  SDF+++  PSPRS++CCR+
Sbjct: 121 LFHYGGI--PMNFRGNWEITRRDLNNPGFIAMVTTDRDFVGSDFEDYSAPSPRSLMCCRI 180

Query: 181 VAVTVFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPI 240
           VA+                 F+VLLVLRHTLPI+ISGAG+YS TL MLLILR +GILLPI
Sbjct: 181 VAII----------------FMVLLVLRHTLPIIISGAGDYSTTLFMLLILRTIGILLPI 240

Query: 241 YVMVRAFTSIQRRRHYQDPRLRLATPEDENDSTN-HAQSRFIHVR 279
           YVMV+AFT+IQRRRH QDPR  LA  + EN+      QSRF+H+R
Sbjct: 241 YVMVKAFTAIQRRRHQQDPRFSLAASDGENELPQLQPQSRFVHIR 267

[Close]

BLAST of Cp4.1LG03g05790 vs. NCBI nr
Match: gi|590652324|ref|XP_007033119.1| (RING/FYVE/PHD zinc finger superfamily protein [Theobroma cacao])

HSP 1 Score: 313.5 bits (802), Expect = 3.6e-82
Identity = 164/283 (57.95%), Postives = 207/283 (73.14%), Query Frame = 1


Query: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMI--SSLNIDVEFMSPSSKLV 60
           MG+HFVLLVD+LLTES LEA IE KN++ + M+S S D+MI  SS  +D    S  SKLV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESKNQSQQGMSSASKDDMIEFSSHRMDENVGSSPSKLV 60

Query: 61  QCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLP 120
           +CRICHDED++  ME PCSC GSLKYAHRKCVQRWCNEKG+TICEICHQ F PGYTAP P
Sbjct: 61  ECRICHDEDEDLNMEIPCSCRGSLKYAHRKCVQRWCNEKGDTICEICHQQFRPGYTAPPP 120

Query: 121 VLYYGDITSPVHFRESWEMSRLNLHVPAGMP----DHEYPDSDFDEFFTPSPRSILCCRM 180
           + +YG +  P++FR +WE+SR +L  P  +     D ++ +SDFD++  PS RS++CCR+
Sbjct: 121 LFHYGGV--PMNFRGNWEISRRDLPAPRFITMVTTDRDFLESDFDDYSAPSSRSLICCRV 180

Query: 181 VAVTVFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPI 240
           +A+                 F+VLLVLRHTLPI+ISGAG+YSLTL  LL+LR VGILLPI
Sbjct: 181 IAII----------------FMVLLVLRHTLPIIISGAGDYSLTLFTLLMLRTVGILLPI 240

Query: 241 YVMVRAFTSIQRRRHYQDPRLRLATPEDEND--STNHAQSRFI 276
           Y+MV+AFT+IQRRRH+QDPR  LA  ++E++        SRFI
Sbjct: 241 YIMVKAFTAIQRRRHHQDPRFSLAASDEESELPQLQQPHSRFI 265

[Close]

BLAST of Cp4.1LG03g05790 vs. NCBI nr
Match: gi|566165708|ref|XP_002305850.2| (hypothetical protein POPTR_0004s09240g [Populus trichocarpa])

HSP 1 Score: 311.6 bits (797), Expect = 1.4e-81
Identity = 165/285 (57.89%), Postives = 202/285 (70.88%), Query Frame = 1


Query: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNM--ISSLNIDVEFMSPSSKLV 60
           MG+HFV LVD+LLTES LEA IE +NR  + MAS S +N    S   +D+E  S + K V
Sbjct: 1   MGDHFVFLVDRLLTESTLEAAIESQNRLRQTMASASKENTKEFSPHWMDLELTSLAGKSV 60

Query: 61  QCRICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLP 120
           +CRICH+E+D+  ME PCSC GSLKYAHRKCVQRWCNEKGNTICEICHQ FEPGYTAP P
Sbjct: 61  ECRICHEEEDDMNMEMPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQQFEPGYTAPPP 120

Query: 121 VLYYGDITSPVHFRESWEMSRLNLHVPAGMP----DHEYPDSDFDEFFTPSPRSILCCRM 180
           +  YG I  P++FR +WE+ R +LH P  +     DHE+ DSDFDE+  PSPRS++CCR+
Sbjct: 121 LFCYGAI--PMNFRGNWEIPRRDLHNPPSIAMVTTDHEFLDSDFDEYSAPSPRSVMCCRI 180

Query: 181 VAVTVFPTSSFYFISSFLISFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPI 240
           +A+                 F+VLLVLRHTL I+ISGAG+YS+TL MLLILR VGILLP+
Sbjct: 181 IAII----------------FMVLLVLRHTLAILISGAGDYSMTLFMLLILRTVGILLPV 240

Query: 241 YVMVRAFTSIQRRRHYQDPRLRLATPEDENDSTN-HAQSRFIHVR 279
           YVMVRAFT+IQ R   QDP   LA  ++EN+       SR IH++
Sbjct: 241 YVMVRAFTAIQHRGRQQDPHFPLAESDEENELPQLQTHSRIIHIQ 267

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g05790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MARH3_HUMAN	1.3e-07	30.26	E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=1 SV=1	[more]
MARH3_BOVIN	1.3e-07	30.26	E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2 SV=1	[more]
MARH3_RAT	1.3e-07	30.26	E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus GN=March3 PE=1 SV=1	[more]
MARH3_MOUSE	1.3e-07	30.26	E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2 SV=1	[more]
MARH2_XENLA	1.7e-07	36.00	E3 ubiquitin-protein ligase MARCH2 OS=Xenopus laevis GN=march2 PE=2 SV=1	[more]

BLAST of Cp4.1LG03g05790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBM8_CUCSA	7.0e-117	77.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G186720 PE=4 SV=1	[more]
A0A067JFQ8_JATCU	4.1e-85	58.25	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02514 PE=4 SV=1	[more]
A0A061EGA0_THECC	2.5e-82	57.95	RING/FYVE/PHD zinc finger superfamily protein OS=Theobroma cacao GN=TCM_019300 P...	[more]
B9H350_POPTR	9.6e-82	57.89	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09240g PE=4 SV=2	[more]
M5WTM7_PRUPE	4.7e-81	59.01	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010144mg PE=4 SV=1	[more]

BLAST of Cp4.1LG03g05790 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01275.1	3.7e-53	42.31	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G38070.1	4.6e-51	41.67	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT3G47550.3	1.3e-32	33.33	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G02610.1	3.6e-32	38.54	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G62460.1	4.8e-32	37.98	RING/FYVE/PHD zinc finger superfamily protein	[more]

BLAST of Cp4.1LG03g05790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778679853\|ref\|XP_004140823.2\|	1.0e-116	77.86	PREDICTED: E3 ubiquitin-protein ligase MARCH2-like [Cucumis sativus]	[more]
gi\|1009128326\|ref\|XP_015881170.1\|	5.8e-88	62.06	PREDICTED: uncharacterized protein LOC107417121 isoform X1 [Ziziphus jujuba]	[more]
gi\|802761989\|ref\|XP_012089929.1\|	6.0e-85	58.25	PREDICTED: uncharacterized protein LOC105648219 [Jatropha curcas]	[more]
gi\|590652324\|ref\|XP_007033119.1\|	3.6e-82	57.95	RING/FYVE/PHD zinc finger superfamily protein [Theobroma cacao]	[more]
gi\|566165708\|ref\|XP_002305850.2\|	1.4e-81	57.89	hypothetical protein POPTR_0004s09240g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR022143	DUF3675
IPR013083	Znf_RING/FYVE/PHD
IPR011016	Znf_RING-CH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0009534	chloroplast thylakoid
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g05790.1	Cp4.1LG03g05790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 60..105 score: 4.0
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 59..106 score: 2.6
IPR011016	Zinc finger, RING-CH-type	PROFILE	PS51292	ZF_RING_CH	coord: 52..112 score: 21
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 57..110 score: 2.0
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 111..240 score: 2.1
None	No IPR available	unknown	Coil	Coil	coord: 278..278 scor
None	No IPR available	PANTHER	PTHR23012:SF89	SUBFAMILY NOT NAMED	coord: 192..278 score: 3.0E-98coord: 33..175 score: 3.0
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 57..109 score: 1.73

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g05790	CmaCh14G008610	Cucurbita maxima (Rimu)	cmacpeB283
Cp4.1LG03g05790	CmaCh01G003430	Cucurbita maxima (Rimu)	cmacpeB494
Cp4.1LG03g05790	CmoCh14G008760	Cucurbita moschata (Rifu)	cmocpeB245
Cp4.1LG03g05790	CmoCh01G003610	Cucurbita moschata (Rifu)	cmocpeB453
Cp4.1LG03g05790	Cla013150	Watermelon (97103) v1	cpewmB614
Cp4.1LG03g05790	MELO3C020316	Melon (DHL92) v3.5.1	cpemeB586
Cp4.1LG03g05790	ClCG05G010750	Watermelon (Charleston Gray)	cpewcgB560
Cp4.1LG03g05790	Lsi05G002800	Bottle gourd (USVL1VR-Ls)	cpelsiB511
Cp4.1LG03g05790	MELO3C020316.2	Melon (DHL92) v3.6.1	cpemedB694
Cp4.1LG03g05790	Bhi01G001326	Wax gourd	cpewgoB0786
Cp4.1LG03g05790	Carg24234	Silver-seed gourd	carcpeB0257
Cp4.1LG03g05790	Carg07435	Silver-seed gourd	carcpeB1073

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG03g05790	Cp4.1LG02g16870	Cucurbita pepo (Zucchini)	cpecpeB449

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG03g05790	Cucumber (Gy14) v1	cgycpeB0243
Cp4.1LG03g05790	Wild cucumber (PI 183967)	cpecpiB605
Cp4.1LG03g05790	Cucumber (Chinese Long) v2	cpecuB603
Cp4.1LG03g05790	Cucumber (Gy14) v2	cgybcpeB401
Cp4.1LG03g05790	Cucumber (Chinese Long) v3	cpecucB0753