Carg24234 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24234
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	E3 ubiquitin-protein ligase march8
Location	Cucurbita_argyrosperma_scaffold_191 : 121559 .. 126165 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATTCGGATTTGTGAAGGAAGTGGTCTCTCTGATTCCAATGGGCCCCCGGTTTGCGGCCGGAAGAATCTCTCGCGCTCTTCCTTCTCCCGCTACATTCTACAGAGAGATTCTTGCTTGCTTCTCTCAATCCATTTTCGCTACAAATAATCTGTTGTTTGTTGATTTGGGTTACTGAAATTATCAAATTTTGCTTTGAAATGTTAATGGAATTATAAGAACACTCCATCTCTTGCTTCCTCTTTCAAAAATCAGCAGCAGGAGGAAAAGAAGGCTCATATTGTTTGTTGCTTCTATCGCACTAATTCTATTCCCATTTTCGTAAGCATCTGTGTTTCCTCTTTTTCTCTTGCATTTAATCTTAGTTCGTCTGCTGTTCATAAGTTTTTGTCTGCAATGTGTTTGTTCATTTGCTAATCATGTTGGTAGCTGTTTGAAGGTTGCTGCCATTCTCTCTTTCTGTGCATTTTCGTTAATTTTAGGCTTTTTCTCGATCTGGATTGCTGTTTTCTTGAATTTCTTCGGGTTTGGTTTCTGAGGTTTCTTTTTGTTTGGTTTATACCATTTAATCATATTGATTTAGTCTTGCTTGGTTTTTGATGATTTGAGTTGTCATTTTCTCTTACATTCCTACATTTTTGCAAGATTTTTGTAACATCTTTCGTTCGATTGCTGCTAAAACTCGATTAGTTTAACTGTAAATAATGAGTTCAAACGTCTGAATCTGTTCAGAGGTCTTAGGAACTAAGTTTTGGGGCAAAATCCTTGCAGTTTGTTCATAATCCATAGGGATCTTCCTACTAATTCTTGAGGAGGCTTTGCCTGTTAGAAGACCAATCTCCAGGGATGATAAGTATTTTAGAGTATTAAGTTTTCAAAATCAAGGTTTGAACCTTTAACTAAATCGAGTTGACTAAATTGTGCTTAGAGCATTGATGTAACTTTTTGAGTATCACTGAAATGTCTCTTTTTTTCCTCCTAAAAGAGACAAAAAGGATAACTGTAAGGAGCGTTTGGTTTTTCATGGCTTGTTTAACATTCAAATTTTTGTTCCCTTTCTCTTTTCTCCTGCAACTTATGATTATTTATTTATAGAATAATTATTGTTACATTATGTCTTATCTTCAGGTGAATTCAATGATTCTTTCCTCTTCTTTTTATTTTAATTTTTAATTTTTAAAGAATTTCATTTGCATACTCATGGCCCACTTCATTGATCTTCGAGAAGCTTTGCCCACTCCAAAGCCAACTTTAGAAAACAATAAGGATTTCAAATTAGTAATTTTTTTTACCTAGGATTTGAACTCATGTTCATGACAATATCTGTAAGAGCCTAAGCCCACCACTAGCAGATATTGTCCTCTTTGGATTTTCCCTTTCGGGTTTCCCCTCAAGGTTTTTGAAACGTGTTTACTAGGGAGAGGTTTCACACCCTTATAAAGAATGCTTTGTTTTCCTCCCCAATCGATGTGGGATCTCACAATCCACTCCCTTTTGGGGCCTAGCATCCTCGTTGACTCTCGTTCCCTTCTCCAATCGATTTAATGTGGGACCCCCCAATCCACCCCCTTCGAGGTCCAGCGTCCTTGTTGGCATACTGCCTTGTGTCCATCCCCCTTTGGGGCTCAGCCTCCTCGTTGGCATATCACCCGGTGTTTGGCTTTGATACCATTTGTAACAGTTCAGACCCACCGCTAGCAGATATTGTCCTCTTTGGACTTTCCCTTTCGGGCTTTCCTTCGAGGTTTTTAAAACGCGTTCTAAGGAGAGGTTTCCACACCCTTATAAAGATTGCTTCGTTCTCCTTCCCAACCGACGTGGAATCTCACAATATCTTATGACATCCCAATTCTAAGGACCTTACCGGTCACACCATCGCCCCATGGGTTGTAAACTCCAAAAGTTTCAAAATTTCTGTTCTTTCTTTATTTTCTGCTAGATATTTGAATTATACTATGCTGAGAAACAATCTGAATTGTCATGGATGTTGTTCACTGCAGCAAACAAAATTGGTCTACATAGTTGTAAATGTTGTTTGGCTTATTTTATATGATTTTATTGACATTCATTCTTTCCAATGTCTACTGGGTCATTGAAGAATGGGGGAACATTTTGTGCTGTTGGTGGATCAGTTGCTCACGGAATCAAACCTCGAAGCTACCATTGAGAGAAAAAACAGAAATTGTCGTCCTATGGCCTCAACAAGTGCAGATAACATGATATCTTCCTTGAATATTGACGTTGAATTCATGTCACCTTCAAGTAAACTTGTTCAGTGCAGAATTTGTCATGATGAGGACGACGAATCAAAAATGGAGACACCATGCTCTTGCCGTGGAAGCTTGAAGGTTAGATTTGGTATACTCAACACCAATTAGTGCTACTTAATGATGAAACTCAGATAGCTTTTCTTTGAATCCCTCGTTTCCAAATTATGACTGACTAAACTGGTTTCAACAATGTTCGTATCGATATTTTCTGCATTTAGTTTCGGTCCAACTTTAACTTTTTCCCCAACTCTTTCCCCAGGATGTCATAATATGCTATAAACACTTGCTAAGTCAGGTCCCTTAGTTTATTTTTACTTGTTGCTAGACTGAAAATGTTAGAATCAGATTCATATCTTTTTTCCTCACTGTGTTCGTTTAGATGGTTCACCTTGATAATTAGCTTCCAGTTAGTGTTGATAATTGCAGTATGCTCATCGCAAGTGCGTTCAGCGGTGGTGCAACGAGAAAGGCAATACAATCTGTGAAATTTGCCACCAGGTCTGTTGTTTTTGTTCAAATAAATGAAAATTTCTTTAATACATGACTAACTTTATGGTCGTAAGAAGTCGTTTTTCTTATACTGCAGGACTTTGAGCCAGGGTATACAGCACCACTCCCTGTATTATATTATGGAGATATTACTTCACCAGTTCATTTCAGGTAAACCATTTACCTCTCTCCCCACAATGCAAGTTTCTCTAGTTTGCATTGTATATTCACTTATTCTTCGTTTATTTTTCCGACACGATTAATATAACATCGCTGTCGTCGAACTGTGTTCTAGGGAAAGTTGGGAGATGTCTAGACTGAACCTGCATGTACCTGCAGGAATGCCTGATCACGAGTATCCTGATTCCGACTTTGATGAATTCTTCACTCCTTCTCCAAGAAGCATATTGTGCTGCCGCATGGTTGCAGTAACTGTATTCCCTACCTCTTCATTTTACTTCATTTCCAGTTTCCTTTATCTCTGTAAACAAATTTAAATGGATTGATAATTGGCTTTGCCTTCTGCACATAAAAAAAGTACTAAATGTTCTTGCTCGTTGATTCTTTTTCATTCACTTGTGAAGGGAGCAAAGCAAACATAGTTTTTGGTTTAAGTTCGAACATTCGTTCTTATAAGATTTTATTTTAGTCTTTGAATTTTCTATTAAGACTTTGAACATTCGTTCTTCTGCATGAACAAGTTTTTGATTCACGATTAGTAAGTTAAGTATTGGGTCTTCAAGCATCAACGAAAAGAATTTAAGTAGTCATGTAATCTAAGTTTCGGAGACGAAATAGAGTATTAGAAGTCGATGGATTAAAATATAACGTTTTGAAGCTTAAGAATGAAAATGAAACGAGCATCAAAGTTCATATCTATAATACGATTTAAACCTGTATTCGCCTTGCTCATATTTGACCAACAATCCCGAGTTTGAAACTTCTAATCGTATCTGTATGTTGCAGTTTATCGTTCTTCTCGTTTTGCGCCATACGCTACCAATTGTAATCAGTGGAGCGGGAGAGTATTCATTGACATTGTTAATGGTAGGCTTGTTTTCTCTGTTTCCCCTTCTACTTTTACTTCCTTTGGCCCTCTTCCATTGTTGAGACCAATGAAGAACCATAAGTTCATGTGCTGTATGTTTCAGCTGCTGATCTTGAGAATTGTTGGAATCCTTCTACCAATCTATGTCATGGTTAGAGCATTTACTTCCATTCAACGACGGCGTCATTATCAGGTTAGTGAGGATGTCTGGATTATTCATTTCGTCGTAAGAACTACTTGGATTTTCGAACAGGTCGATACAGAATAGATATGAATTTTGTTGGGTTATTCTGTTATATGGTGTCACATATAAGGACATCCATGACCAACTTAAACGTAACTCAACTAATTAAAGCATATATCTTCCATCGGTGATGATTGTATTGTTACCAACCATGATGAACATACGGTAGACAGTGCACATTCCTGAAAATTTGCTCTGGTTATCTATTCTCTTTGAGCTTGATGTCTAGCAGTTGTTTACATTCCCTTGATATATGACGTTTGAGTATACTAGTATGCTTTTGGTAGGATCCCCGTCTTCGCCTCGCGACACCAGAGGACGAAAATGACTCGACAAACCATGCTCAATCGCGCTTCATCCACGTGAGATAGCAGTACATTCACCTTGTCTCTAATACGACGGAACCGACGTAAGCACAACGACGAGATGGAAACTGGTTGGATGTAATGCATAGAAGGTCATCAACGCCATTCATGGTCCTTGCATCAAGACTCGACCACGACCACGACCACAACCACGACCTAGTTATTTTCTGCAGTGAAGTTCATCATCCG

mRNA sequence

ATGAGATTCGGATTTGTGAAGGAAGTGGTCTCTCTGATTCCAATGGGCCCCCGGTTTGCGGCCGGAAGAATCTCTCGCGCTCTTCCTTCTCCCGCTACATTCTACAGAGAGATTCTTGCTTGCTTCTCTCAATCCATTTTCGCTACAAATAATCTGTTAATGGGGGAACATTTTGTGCTGTTGGTGGATCAGTTGCTCACGGAATCAAACCTCGAAGCTACCATTGAGAGAAAAAACAGAAATTGTCGTCCTATGGCCTCAACAAGTGCAGATAACATGATATCTTCCTTGAATATTGACGTTGAATTCATGTCACCTTCAAGTAAACTTGTTCAGTGCAGAATTTGTCATGATGAGGACGACGAATCAAAAATGGAGACACCATGCTCTTGCCGTGGAAGCTTGAAGTATGCTCATCGCAAGTGCGTTCAGCGGTGGTGCAACGAGAAAGGCAATACAATCTGTGAAATTTGCCACCAGGACTTTGAGCCAGGGTATACAGCACCACTCCCTGTATTATATTATGGAGATATTACTTCACCAGTTCATTTCAGGGAAAGTTGGGAGATGTCTAGACTGAACCTGCATGTACCTGCAGGAATGCCTGATCACGAGTATCCTGATTCCGACTTTGATGAATTCTTCACTCCTTCTCCAAGAAGCATATTGTGCTGCCGCATGGTTGCAGTAACTTTTATCGTTCTTCTCGTTTTGCGCCATACGCTACCAATTGTAATCAGTGGAGCGGGAGAGTATTCATTGACATTGTTAATGCTGCTGATCTTGAGAATTGTTGGAATCCTTCTACCAATCTATGTCATGGTTAGAGCATTTACTTCCATTCAACGACGGCGTCATTATCAGGATCCCCGTCTTCGCCTCGCGACACCAGAGGACGAAAATGACTCGACAAACCATGCTCAATCGCGCTTCATCCACGTGAGATAGCAGTACATTCACCTTGTCTCTAATACGACGGAACCGACGTAAGCACAACGACGAGATGGAAACTGGTTGGATGTAATGCATAGAAGGTCATCAACGCCATTCATGGTCCTTGCATCAAGACTCGACCACGACCACGACCACAACCACGACCTAGTTATTTTCTGCAGTGAAGTTCATCATCCG

Coding sequence (CDS)

ATGAGATTCGGATTTGTGAAGGAAGTGGTCTCTCTGATTCCAATGGGCCCCCGGTTTGCGGCCGGAAGAATCTCTCGCGCTCTTCCTTCTCCCGCTACATTCTACAGAGAGATTCTTGCTTGCTTCTCTCAATCCATTTTCGCTACAAATAATCTGTTAATGGGGGAACATTTTGTGCTGTTGGTGGATCAGTTGCTCACGGAATCAAACCTCGAAGCTACCATTGAGAGAAAAAACAGAAATTGTCGTCCTATGGCCTCAACAAGTGCAGATAACATGATATCTTCCTTGAATATTGACGTTGAATTCATGTCACCTTCAAGTAAACTTGTTCAGTGCAGAATTTGTCATGATGAGGACGACGAATCAAAAATGGAGACACCATGCTCTTGCCGTGGAAGCTTGAAGTATGCTCATCGCAAGTGCGTTCAGCGGTGGTGCAACGAGAAAGGCAATACAATCTGTGAAATTTGCCACCAGGACTTTGAGCCAGGGTATACAGCACCACTCCCTGTATTATATTATGGAGATATTACTTCACCAGTTCATTTCAGGGAAAGTTGGGAGATGTCTAGACTGAACCTGCATGTACCTGCAGGAATGCCTGATCACGAGTATCCTGATTCCGACTTTGATGAATTCTTCACTCCTTCTCCAAGAAGCATATTGTGCTGCCGCATGGTTGCAGTAACTTTTATCGTTCTTCTCGTTTTGCGCCATACGCTACCAATTGTAATCAGTGGAGCGGGAGAGTATTCATTGACATTGTTAATGCTGCTGATCTTGAGAATTGTTGGAATCCTTCTACCAATCTATGTCATGGTTAGAGCATTTACTTCCATTCAACGACGGCGTCATTATCAGGATCCCCGTCTTCGCCTCGCGACACCAGAGGACGAAAATGACTCGACAAACCATGCTCAATCGCGCTTCATCCACGTGAGATAG

Protein sequence

MRFGFVKEVVSLIPMGPRFAAGRISRALPSPATFYREILACFSQSIFATNNLLMGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQCRICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVLYYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLRLATPEDENDSTNHAQSRFIHVR

Homology

[Close]

BLAST of Carg24234 vs. NCBI nr
Match: XP_023528859.1 (uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528860.1 uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528861.1 uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 530.8 bits (1366), Expect = 3.2e-147
Identity = 261/262 (99.62%), Postives = 261/262 (99.62%), Query Frame = 0


Query: 54  MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 113
           MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC
Sbjct: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 60

Query: 114 RICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 173
           RICHDEDDESKMETPCSC GSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL
Sbjct: 61  RICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 120

Query: 174 YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFI 233
           YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFI
Sbjct: 121 YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFI 180

Query: 234 VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR 293
           VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR
Sbjct: 181 VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR 240

Query: 294 LATPEDENDSTNHAQSRFIHVR 316
           LATPEDENDSTNHAQSRFIHVR
Sbjct: 241 LATPEDENDSTNHAQSRFIHVR 262

[Close]

BLAST of Carg24234 vs. NCBI nr
Match: XP_022984108.1 (uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984109.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984110.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984111.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984112.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984113.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984114.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984115.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984116.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984117.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984118.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984119.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984120.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984122.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984123.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984124.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984125.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984126.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984127.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984129.1 uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima])

HSP 1 Score: 523.9 bits (1348), Expect = 3.9e-145
Identity = 258/262 (98.47%), Postives = 258/262 (98.47%), Query Frame = 0


Query: 54  MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 113
           MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFM  SSKLVQC
Sbjct: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMPSSSKLVQC 60

Query: 114 RICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 173
           RICHDEDDESKME PCSC GSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL
Sbjct: 61  RICHDEDDESKMEAPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 120

Query: 174 YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFI 233
           YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFI
Sbjct: 121 YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFI 180

Query: 234 VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR 293
           VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR
Sbjct: 181 VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR 240

Query: 294 LATPEDENDSTNHAQSRFIHVR 316
           LATPEDENDSTNHAQSRFIHVR
Sbjct: 241 LATPEDENDSTNHAQSRFIHVR 262

[Close]

BLAST of Carg24234 vs. NCBI nr
Match: XP_022935629.1 (uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935630.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935631.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935632.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935633.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935634.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935635.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935636.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935637.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935638.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935640.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935641.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_022935643.1 uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata])

HSP 1 Score: 520.8 bits (1340), Expect = 3.3e-144
Identity = 256/262 (97.71%), Postives = 257/262 (98.09%), Query Frame = 0


Query: 54  MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 113
           MGEHFVLLVDQLLTESNLE+TIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC
Sbjct: 1   MGEHFVLLVDQLLTESNLESTIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 60

Query: 114 RICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 173
           RICHDEDDESKMETPCSC GSLKYAHR CVQRWCNEKGNTICEICHQDFEPGYTAPLPVL
Sbjct: 61  RICHDEDDESKMETPCSCCGSLKYAHRMCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 120

Query: 174 YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFI 233
           YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFI
Sbjct: 121 YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFI 180

Query: 234 VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR 293
           VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQ RRHYQDPRL 
Sbjct: 181 VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQGRRHYQDPRLH 240

Query: 294 LATPEDENDSTNHAQSRFIHVR 316
           LATPEDENDSTNHAQS FIHVR
Sbjct: 241 LATPEDENDSTNHAQSHFIHVR 262

[Close]

BLAST of Carg24234 vs. NCBI nr
Match: XP_023528862.1 (uncharacterized protein LOC111791660 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 518.8 bits (1335), Expect = 1.2e-143
Identity = 257/262 (98.09%), Postives = 257/262 (98.09%), Query Frame = 0


Query: 54  MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 113
           MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC
Sbjct: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 60

Query: 114 RICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 173
           RICHDEDDESKMETPCSC GSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL
Sbjct: 61  RICHDEDDESKMETPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 120

Query: 174 YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFI 233
           YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRM    FI
Sbjct: 121 YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRM----FI 180

Query: 234 VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR 293
           VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR
Sbjct: 181 VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR 240

Query: 294 LATPEDENDSTNHAQSRFIHVR 316
           LATPEDENDSTNHAQSRFIHVR
Sbjct: 241 LATPEDENDSTNHAQSRFIHVR 258

[Close]

BLAST of Carg24234 vs. NCBI nr
Match: XP_022984128.1 (uncharacterized protein LOC111482515 isoform X2 [Cucurbita maxima])

HSP 1 Score: 511.9 bits (1317), Expect = 1.5e-141
Identity = 254/262 (96.95%), Postives = 254/262 (96.95%), Query Frame = 0


Query: 54  MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 113
           MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFM  SSKLVQC
Sbjct: 1   MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMPSSSKLVQC 60

Query: 114 RICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 173
           RICHDEDDESKME PCSC GSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL
Sbjct: 61  RICHDEDDESKMEAPCSCCGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 120

Query: 174 YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTFI 233
           YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRM    FI
Sbjct: 121 YYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRM----FI 180

Query: 234 VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR 293
           VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR
Sbjct: 181 VLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRLR 240

Query: 294 LATPEDENDSTNHAQSRFIHVR 316
           LATPEDENDSTNHAQSRFIHVR
Sbjct: 241 LATPEDENDSTNHAQSRFIHVR 258

[Close]

BLAST of Carg24234 vs. TAIR10
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 214.2 bits (544), Expect = 1.2e-55
Identity = 120/270 (44.44%), Postives = 166/270 (61.48%), Query Frame = 0


Query: 54  MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 113
           MG+HFVLLVD+L+TES +EA I+ +N+  +         ++    +++   +    + +C
Sbjct: 1   MGDHFVLLVDRLITESTIEAAIQSRNQMLQANIPVEECTILDDKTLEM-LRNGDLSMAEC 60

Query: 114 RICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 173
           RICHDED +S METPCSC GS+KYAHR+CVQRWCNEKG+T CEICHQ+F+P YTAP P+L
Sbjct: 61  RICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAPPPLL 120

Query: 174 YYGDITSPVHFRESWEMS----RLNLHVPAGMP--DHEYPDSDFDEFFTPSPRSILCCRM 233
             G +  P+HFR +W +S    R    VPA     D  YP S        S  S +CCR 
Sbjct: 121 ELGHV--PLHFRGNWGISQREHRFITVVPADSTFIDQPYPLS--------STTSFICCRS 180

Query: 234 VAVTFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHY 293
           + + F+ LL+LRHTLP+V++G+  +   L  LL LRI+GI+LPIYV+ +A  + +R    
Sbjct: 181 LVLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCRRHSRT 240

Query: 294 QDPRLRLATPEDENDSTN--HAQSRFIHVR 316
            D      + ++E DS      QS  I VR
Sbjct: 241 LDTSPSDDSSDEETDSWRLPQTQSYIIGVR 259

[Close]

BLAST of Carg24234 vs. TAIR10
Match: AT5G38070.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 208.8 bits (530), Expect = 5.0e-54
Identity = 110/248 (44.35%), Postives = 165/248 (66.53%), Query Frame = 0


Query: 54  MGEHFVLLVDQLLTESNLEATIERKNRNCRPMA-STSADNMISSLNIDVEFMSPSSKLVQ 113
           MG+H VL+VD+L ++S L  T+ R +    P A S + D +  S++   +     SK VQ
Sbjct: 1   MGDHLVLVVDRLSSDSGL-GTVNRAD----PKADSVNEDGVSESISAGADLC--ESKFVQ 60

Query: 114 CRICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPV 173
           CRICHDED+++ M+TPCSC G+LK+AH  CVQRWCNEKG+T+CEIC Q ++PGYTAP  +
Sbjct: 61  CRICHDEDEDTNMDTPCSCSGTLKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYTAPRQL 120

Query: 174 LYYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVTF 233
            +Y  I+  ++F   W +  L+L  P  +   +  D D D +   SP S++CCR++A+ F
Sbjct: 121 FHYTGIS--MNFGSDWGIEGLDLRNPYFLTWGD-ADDDHDLYSFHSPTSLICCRLIALLF 180

Query: 234 IVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPRL 293
           ++LL LRH+LP+++ G  ++S+TLLML ++R +GILL  YV  ++F  IQR R  +D RL
Sbjct: 181 VLLLFLRHSLPVLLGGVDDFSITLLMLPLVRTLGILLIAYVFFKSFIVIQRCRQERDTRL 238

Query: 294 RLATPEDE 301
              + ++E
Sbjct: 241 SGFSSDEE 238

[Close]

BLAST of Carg24234 vs. TAIR10
Match: AT1G02610.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 146.4 bits (368), Expect = 3.1e-35
Identity = 79/189 (41.80%), Postives = 109/189 (57.67%), Query Frame = 0


Query: 108 SKLVQCRICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYT 167
           S   +CRICH+E+ ES  E PCSC G++K+AHR C+QRWC+EKGNTICEIC Q+++PGYT
Sbjct: 15  SSFNRCRICHEEEAESYFEAPCSCSGTIKFAHRDCIQRWCDEKGNTICEICLQEYKPGYT 74

Query: 168 APLPVLYYGDITSPVHFRESWEMSRLNLHVPAGMPDH--------EYPDSDFDEFFTPSP 227
                      + P  F E+    R NLH+                  +SDF E  +   
Sbjct: 75  T---------TSKPSRFIETAVTIRDNLHIMRRENGRRRRNRRLVNREESDFQECNSGVD 134

Query: 228 RSILCCRMVAVTFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFT 287
           R   CCR +A+ F V+L+++H    V  G  EY  T+  +L L+ +GILLP+ V++R  T
Sbjct: 135 RGASCCRYLALIFSVILLIKHAFDAVY-GTEEYPYTIFTVLTLKAIGILLPMLVIIRTIT 193

Query: 288 SIQRRRHYQ 289
           +IQR   YQ
Sbjct: 195 AIQRSLRYQ 193

[Close]

BLAST of Carg24234 vs. TAIR10
Match: AT4G02075.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 132.1 bits (331), Expect = 6.0e-31
Identity = 69/177 (38.98%), Postives = 106/177 (59.89%), Query Frame = 0


Query: 109 KLVQCRICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTA 168
           ++ +CRICH+E++ES  E PC+C G++K+AHR C+QRWCNEKGNT CEIC Q ++ GYTA
Sbjct: 16  RITRCRICHEEEEESFFEVPCACSGTVKFAHRNCIQRWCNEKGNTTCEICLQVYKDGYTA 75

Query: 169 PL--PVLYYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCR 228
            L    L   ++T  V+ R      RL              +SD  +  + + R    CR
Sbjct: 76  VLKQSKLIEQEVTIRVNGRRRRRSRRL----------VSIAESDISQCNSVADRGASFCR 135

Query: 229 MVAVTFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQR 284
            +  T  V L+++HT   VI G  EY  ++  +L L+ +GILLP+++++R  ++IQ+
Sbjct: 136 SLTFTLSVFLLMKHTFD-VIYGTEEYPFSVFTVLTLKAIGILLPMFIIIRTISTIQK 181

[Close]

BLAST of Carg24234 vs. TAIR10
Match: AT1G14260.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-28
Identity = 80/246 (32.52%), Postives = 114/246 (46.34%), Query Frame = 0


Query: 53  LMGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLV- 112
           +   H V+ V+ L+     EA    +         + ADN I   + D         L+ 
Sbjct: 1   MSNHHTVVYVNGLVRPVLAEAEYSMR-------TESPADNAIDIYDGDTTENEEEDSLIS 60

Query: 113 --QCRICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAP 172
             +CRIC DE D   +E+PC+C GSLKYAHRKCVQRWCNEKGNTICEICHQ ++ GYT+ 
Sbjct: 61  SAECRICQDECDIKNLESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQPYQAGYTSX 120

Query: 173 LPVLYYGDITSPVHFRESWEMSRLNLHVP----AGMPDHEYPDSDFDEFFTPSPRSILCC 232
                       +     W +S L+L  P        + +  +S++D++           
Sbjct: 121 XXXXXXXXXXXDI--GGGWRISGLDLDDPRLLAIAEAERQILESEYDDYTASDTSGAAFF 180

Query: 233 RMVAVTFIVLLVLRH--TLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQR 290
           R            RH  T+P       +   ++L L +LR    LLP Y+M  A + + R
Sbjct: 181 RSAXXXXXXXXXXRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASAISILHR 237

[Close]

BLAST of Carg24234 vs. Swiss-Prot
Match: sp|Q5T0T0|MARH8_HUMAN (E3 ubiquitin-protein ligase MARCH8 OS=Homo sapiens OX=9606 GN=MARCH8 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.8e-09
Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 0


Query: 104 MSPSSKLVQCRICHDE-DDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDF 163
           ++PSS+ + CRICH E DDES + TPC C GSL + H+ C+Q+W        CE+C  +F
Sbjct: 72  ITPSSQDI-CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 130

[Close]

BLAST of Carg24234 vs. Swiss-Prot
Match: sp|Q5XH39|MARH8_XENLA (E3 ubiquitin-protein ligase MARCH8 OS=Xenopus laevis OX=8355 GN=march8 PE=2 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 4.7e-09
Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 0


Query: 104 MSPSSKLVQCRICHDE-DDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDF 163
           ++PSS+ + CRICH E DDES + TPC C GSL + H+ C+Q+W        CE+C  +F
Sbjct: 45  VTPSSQDI-CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKFEF 103

[Close]

BLAST of Carg24234 vs. Swiss-Prot
Match: sp|Q0VD59|MARH8_BOVIN (E3 ubiquitin-protein ligase MARCH8 OS=Bos taurus OX=9913 GN=MARCH8 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.1e-09
Identity = 27/60 (45.00%), Postives = 39/60 (65.00%), Query Frame = 0


Query: 104 MSPSSKLVQCRICHDE-DDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDF 163
           ++PS++ + CRICH E DDES + TPC C GSL + H+ C+Q+W        CE+C  +F
Sbjct: 70  VTPSNQDI-CRICHCEGDDESPLITPCRCTGSLHFVHQTCLQQWIKSSDTRCCELCKYEF 128

[Close]

BLAST of Carg24234 vs. Swiss-Prot
Match: sp|Q9DBD2|MARH8_MOUSE (E3 ubiquitin-protein ligase MARCH8 OS=Mus musculus OX=10090 GN=March8 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.1e-09
Identity = 27/60 (45.00%), Postives = 39/60 (65.00%), Query Frame = 0


Query: 104 MSPSSKLVQCRICHDE-DDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDF 163
           ++PS++ + CRICH E DDES + TPC C GSL + H+ C+Q+W        CE+C  +F
Sbjct: 68  VTPSNQDI-CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 126

[Close]

BLAST of Carg24234 vs. Swiss-Prot
Match: sp|Q28IK8|MARH8_XENTR (E3 ubiquitin-protein ligase MARCH8 OS=Xenopus tropicalis OX=8364 GN=march8 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-08
Identity = 36/100 (36.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 64  QLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQCRICHDE-DDE 123
           +L  E  L  ++ R +   +  + TS     S     V   +PSS+ + CRICH E DDE
Sbjct: 8   KLQNEKTLGHSVSRSSNISKAGSPTSVSAPSSFPRTSV---TPSSQDI-CRICHCEGDDE 67

Query: 124 SKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDF 163
           S + TPC C GSL + H+ C+Q+W        CE+C  +F
Sbjct: 68  SPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKFEF 103

[Close]

BLAST of Carg24234 vs. TrEMBL
Match: tr|A0A0A0LBM8|A0A0A0LBM8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G186720 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 3.5e-118
Identity = 217/264 (82.20%), Postives = 234/264 (88.64%), Query Frame = 0


Query: 54  MGEHFVLLVDQLLTESNLEATIERKNRNCRPMAST--SADNMISSLNIDVEFMSPSSKLV 113
           MG+HF LLVDQLLTESNLEATIERKNR C PMAST  +ADNMISS NIDVE +SPSS +V
Sbjct: 1   MGDHFGLLVDQLLTESNLEATIERKNRICHPMASTNANADNMISSSNIDVESVSPSS-IV 60

Query: 114 QCRICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLP 173
           QCRICHDEDD SKMETPCSC GSLKYAHRKC+QRWCNEKG+TICEICHQDF+PGYT+P P
Sbjct: 61  QCRICHDEDDGSKMETPCSCCGSLKYAHRKCIQRWCNEKGDTICEICHQDFKPGYTSPPP 120

Query: 174 VLYYGDITSPVHFRESWEMSRLNLHVPAGMPDHEYPDSDFDEFFTPSPRSILCCRMVAVT 233
           V YYGDI SP+HFR SWEMSRLNLHVPAGMPDHEY DSDFD+FF PSPRSILCCR+VAV 
Sbjct: 121 VFYYGDINSPIHFRGSWEMSRLNLHVPAGMPDHEYLDSDFDDFFAPSPRSILCCRVVAVI 180

Query: 234 FIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHYQDPR 293
           FI LLVLRHTLPIVISGAG YS TLLMLLILRIVGILLPIYVMV+AFT IQRR  YQ PR
Sbjct: 181 FIALLVLRHTLPIVISGAGGYSWTLLMLLILRIVGILLPIYVMVKAFTYIQRRHRYQAPR 240

Query: 294 LRLATPEDENDSTNHAQSRFIHVR 316
           L+L T  D ++STNH+QS  IH+R
Sbjct: 241 LQLTTLGDNSESTNHSQSHLIHLR 263

[Close]

BLAST of Carg24234 vs. TrEMBL
Match: tr|A0A2P5CBR3|A0A2P5CBR3_9ROSA (Zinc finger, RING-CH-type OS=Trema orientalis OX=63057 GN=TorRG33x02_290980 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 9.9e-89
Identity = 171/280 (61.07%), Postives = 212/280 (75.71%), Query Frame = 0


Query: 54  MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNMISSLNIDVEFMSPSSKLVQC 113
           MG+HF LLVD+LLTES LEA IER+N+  + M   S DNMISS  ID+   S S KLV+C
Sbjct: 1   MGDHFALLVDRLLTESTLEAAIERENQLQKSMPFASQDNMISSHKIDMNISSSSGKLVEC 60

Query: 114 RICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLPVL 173
           RICHDED++  METPCSCRGSLKYAHRKCVQRWCNEKG+ ICEICHQ FEPGYTAP P+ 
Sbjct: 61  RICHDEDEDLNMETPCSCRGSLKYAHRKCVQRWCNEKGDIICEICHQQFEPGYTAPPPLF 120

Query: 174 YYGDITSPVHFRESWEMSRLNLHVP--AGM--PDHEYPDSDFDEFFTPSPRSILCCRMVA 233
           +YG +  P++FR +WE+SR +LH     GM  PD +Y D++FDE+  PSPRS++CCR+VA
Sbjct: 121 HYGGV--PMNFRGNWEISRRDLHNTQFLGMVTPDRDYVDTEFDEYPVPSPRSVMCCRIVA 180

Query: 234 VTFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHY-- 293
           + F+VLLVLRHTLPI+ISGAGEYS+TL MLL+LR +GILLPI++MVRAFTSIQR RH   
Sbjct: 181 IIFMVLLVLRHTLPIIISGAGEYSMTLFMLLVLRTIGILLPIFIMVRAFTSIQRHRHQQA 240

Query: 294 ------------QDPRLRLATPEDENDSTNHAQSRFIHVR 316
                       QD  + LA+ ++EN+   H + RF+ +R
Sbjct: 241 RVAGSLLCGFGRQDSHISLASSDEENE-LPHPRPRFVQIR 277

[Close]

BLAST of Carg24234 vs. TrEMBL
Match: tr|A0A1S4E264|A0A1S4E264_CUCME (uncharacterized protein LOC103496860 OS=Cucumis melo OX=3656 GN=LOC103496860 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88
Identity = 171/241 (70.95%), Postives = 187/241 (77.59%), Query Frame = 0


Query: 86  ASTSADNMISSLNIDVEFMSPSSKLVQCRICHDEDDESKMETPCSCRGSLKYAHRKCVQR 145
           A+ +ADNMISSLNIDVE +SPSS +VQCRICHDEDD SKMETPCSC GSLKYAHRKC+QR
Sbjct: 4   ANANADNMISSLNIDVESVSPSS-IVQCRICHDEDDGSKMETPCSCCGSLKYAHRKCIQR 63

Query: 146 WCNEKGNTICEICHQDFEPGYTAPLPVLYYGDITSPVHFRESWEMSRLNLHVPAGMPDHE 205
           WCNEKG+TICEICHQDF+PGYT+P PV YYGDI +P+HFR SWEMSRLNLHVPAGMPDHE
Sbjct: 64  WCNEKGDTICEICHQDFKPGYTSPPPVFYYGDINAPMHFRGSWEMSRLNLHVPAGMPDHE 123

Query: 206 YPDSDFDEFFTPSPRSILCCRMVAVTFIVLLVLRHTLPIVISGAGEYSLTLLM------- 265
           Y DSDFD+FF PSPRSIL CR+VAV FI LL+LRHTLPIVISGAG +SLTLLM       
Sbjct: 124 YLDSDFDDFFAPSPRSILFCRVVAVIFIALLILRHTLPIVISGAGGHSLTLLMVRLFLGF 183

Query: 266 ----------------------------LLILRIVGILLPIYVMVRAFTSIQRRRHYQDP 292
                                       LL+LRIVGILLPIYVMV+AFT IQRR HYQ  
Sbjct: 184 PSSTFLSLGPFLLLKPGKNHKFMCSIFQLLVLRIVGILLPIYVMVKAFTFIQRRHHYQRE 243

[Close]

BLAST of Carg24234 vs. TrEMBL
Match: tr|A0A2C9WBS4|A0A2C9WBS4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G073300 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.2e-87
Identity = 166/269 (61.71%), Postives = 207/269 (76.95%), Query Frame = 0


Query: 54  MGEHFVLLVDQLLTESNLEATIERKNR--NCRPMASTSADNMISSLNIDVEFMSPSSKLV 113
           MG+HFVLLVD+LLTES LEA IE +NR     P AS       S   +D++F S S KLV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRNRWQQATPSASQVNITEFSPQGMDLDFRSSSRKLV 60

Query: 114 QCRICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLP 173
           +CRICHDED++S ME PCSC GSLKYAHRKCVQRWCNEKG+T+CEICHQ F+PGYTAP P
Sbjct: 61  ECRICHDEDEDSNMEVPCSCCGSLKYAHRKCVQRWCNEKGDTVCEICHQQFKPGYTAPPP 120

Query: 174 VLYYGDITSPVHFRESWEMSRLNLHVPAGM----PDHEYPDSDFDEFFTPSPRSILCCRM 233
           + +YG +  P++FR +WE++R +L+ P  +     DHE+ DSDFDE+  PSPRS++CCR+
Sbjct: 121 LFHYGGV--PMNFRGNWEITRRDLNNPGFIAMVTTDHEFIDSDFDEYSAPSPRSLMCCRI 180

Query: 234 VAVTFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHY 293
           VA+ F++LLVLRHTLPI+ISGAG+YS T+ MLLILR +GILLPIYVMV+AFT+IQ RR  
Sbjct: 181 VAIIFMILLVLRHTLPIIISGAGDYSSTMFMLLILRTIGILLPIYVMVKAFTAIQHRRQQ 240

Query: 294 QDPRLRLATPEDENDSTN-HAQSRFIHVR 316
           Q PR  LA  ++EN+      QSRFIHV+
Sbjct: 241 QHPRFSLAASDEENELPQLQPQSRFIHVQ 267

[Close]

BLAST of Carg24234 vs. TrEMBL
Match: tr|A0A067JFQ8|A0A067JFQ8_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02514 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.7e-86
Identity = 165/269 (61.34%), Postives = 207/269 (76.95%), Query Frame = 0


Query: 54  MGEHFVLLVDQLLTESNLEATIERKNRNCRPMASTSADNM--ISSLNIDVEFMSPSSKLV 113
           MG+HFVLLVD+LLTES LEA IER +   +   S S D     S   +D++F S SSKLV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIERNSHWQQATRSASGDTTTDFSPDRMDLDFRSSSSKLV 60

Query: 114 QCRICHDEDDESKMETPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQDFEPGYTAPLP 173
           +CRICHDED++  ME PCSC GSLKYAHRKCVQRWCNEKG+T+CEICHQ F+PGYTAP P
Sbjct: 61  ECRICHDEDEDMNMEVPCSCCGSLKYAHRKCVQRWCNEKGDTVCEICHQQFKPGYTAPPP 120

Query: 174 VLYYGDITSPVHFRESWEMSRLNLHVPAGM----PDHEYPDSDFDEFFTPSPRSILCCRM 233
           + +YG I  P++FR +WE++R +L+ P  +     D ++  SDF+++  PSPRS++CCR+
Sbjct: 121 LFHYGGI--PMNFRGNWEITRRDLNNPGFIAMVTTDRDFVGSDFEDYSAPSPRSLMCCRI 180

Query: 234 VAVTFIVLLVLRHTLPIVISGAGEYSLTLLMLLILRIVGILLPIYVMVRAFTSIQRRRHY 293
           VA+ F+VLLVLRHTLPI+ISGAG+YS TL MLLILR +GILLPIYVMV+AFT+IQRRRH 
Sbjct: 181 VAIIFMVLLVLRHTLPIIISGAGDYSTTLFMLLILRTIGILLPIYVMVKAFTAIQRRRHQ 240

Query: 294 QDPRLRLATPEDENDSTN-HAQSRFIHVR 316
           QDPR  LA  + EN+      QSRF+H+R
Sbjct: 241 QDPRFSLAASDGENELPQLQPQSRFVHIR 267

The following BLAST results are available for this feature:

BLAST of Carg24234 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528859.1	3.2e-147	99.62	uncharacterized protein LOC111791660 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022984108.1	3.9e-145	98.47	uncharacterized protein LOC111482515 isoform X1 [Cucurbita maxima] >XP_022984109...	[more]
XP_022935629.1	3.3e-144	97.71	uncharacterized protein LOC111442434 isoform X1 [Cucurbita moschata] >XP_0229356...	[more]
XP_023528862.1	1.2e-143	98.09	uncharacterized protein LOC111791660 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022984128.1	1.5e-141	96.95	uncharacterized protein LOC111482515 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg24234 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01275.1	1.2e-55	44.44	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G38070.1	5.0e-54	44.35	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G02610.1	3.1e-35	41.80	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT4G02075.1	6.0e-31	38.98	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G14260.1	2.1e-28	32.52	RING/FYVE/PHD zinc finger superfamily protein	[more]

BLAST of Carg24234 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5T0T0\|MARH8_HUMAN	2.8e-09	46.67	E3 ubiquitin-protein ligase MARCH8 OS=Homo sapiens OX=9606 GN=MARCH8 PE=1 SV=1	[more]
sp\|Q5XH39\|MARH8_XENLA	4.7e-09	46.67	E3 ubiquitin-protein ligase MARCH8 OS=Xenopus laevis OX=8355 GN=march8 PE=2 SV=2	[more]
sp\|Q0VD59\|MARH8_BOVIN	6.1e-09	45.00	E3 ubiquitin-protein ligase MARCH8 OS=Bos taurus OX=9913 GN=MARCH8 PE=2 SV=1	[more]
sp\|Q9DBD2\|MARH8_MOUSE	6.1e-09	45.00	E3 ubiquitin-protein ligase MARCH8 OS=Mus musculus OX=10090 GN=March8 PE=2 SV=1	[more]
sp\|Q28IK8\|MARH8_XENTR	1.0e-08	36.00	E3 ubiquitin-protein ligase MARCH8 OS=Xenopus tropicalis OX=8364 GN=march8 PE=2 ...	[more]

BLAST of Carg24234 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LBM8\|A0A0A0LBM8_CUCSA	3.5e-118	82.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G186720 PE=4 SV=1	[more]
tr\|A0A2P5CBR3\|A0A2P5CBR3_9ROSA	9.9e-89	61.07	Zinc finger, RING-CH-type OS=Trema orientalis OX=63057 GN=TorRG33x02_290980 PE=4...	[more]
tr\|A0A1S4E264\|A0A1S4E264_CUCME	2.9e-88	70.95	uncharacterized protein LOC103496860 OS=Cucumis melo OX=3656 GN=LOC103496860 PE=...	[more]
tr\|A0A2C9WBS4\|A0A2C9WBS4_MANES	4.2e-87	61.71	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G073300 PE=4 SV=...	[more]
tr\|A0A067JFQ8\|A0A067JFQ8_JATCU	2.7e-86	61.34	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02514 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR033275	MARCH-like
IPR022143	DUF3675
IPR013083	Znf_RING/FYVE/PHD
IPR011016	Znf_RING-CH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24234-RA	Carg24234-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 112..159 e-value: 5.4E-23 score: 92.4
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 113..158 e-value: 6.8E-14 score: 51.6
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 105..165 score: 22.649
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 100..168 e-value: 3.1E-20 score: 73.5
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 164..277 e-value: 1.4E-33 score: 115.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..306
None	No IPR available	PANTHER	PTHR23012:SF100	SUBFAMILY NOT NAMED	coord: 54..304
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 113..159 e-value: 1.92773E-20 score: 81.6048
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 110..162
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	MEMBRANE ASSOCIATED RING FINGER	coord: 54..304

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24234	Cla013150	Watermelon (97103) v1	carwmB0166
Carg24234	MELO3C020316	Melon (DHL92) v3.5.1	carmeB0181
Carg24234	ClCG05G010750	Watermelon (Charleston Gray)	carwcgB0168
Carg24234	CmaCh14G008610	Cucurbita maxima (Rimu)	carcmaB0240
Carg24234	CmaCh01G003430	Cucurbita maxima (Rimu)	carcmaB0241
Carg24234	CmoCh01G003610	Cucurbita moschata (Rifu)	carcmoB0249
Carg24234	CmoCh14G008760	Cucurbita moschata (Rifu)	carcmoB0248
Carg24234	Lsi05G002800	Bottle gourd (USVL1VR-Ls)	carlsiB158
Carg24234	Cp4.1LG03g05790	Cucurbita pepo (Zucchini)	carcpeB0257
Carg24234	Cp4.1LG02g16870	Cucurbita pepo (Zucchini)	carcpeB0256
Carg24234	MELO3C020316.2	Melon (DHL92) v3.6.1	carmedB0185
Carg24234	Cla97C05G093070	Watermelon (97103) v2	carwmbB0181
Carg24234	Bhi01G001326	Wax gourd	carwgoB0227

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24234	Carg07435	Silver-seed gourd	carcarB213

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24234	Cucumber (Gy14) v2	carcgybB0190
Carg24234	Cucumber (Gy14) v1	carcgyB0216
Carg24234	Wild cucumber (PI 183967)	carcpiB0203
Carg24234	Cucumber (Chinese Long) v2	carcuB0196
Carg24234	Cucumber (Chinese Long) v3	carcucB0203