CmoCh01G003610 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G003610
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	Cmo_Chr01 : 1755598 .. 1760098 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTTGTTCAACTGGGTTACTGATACATCAATTTTTCTGTCAATCAAGGTAATGGAGCAGTTATAAGAACACTCCATCTCTTGCTTCCTCATTGGAAAAGCGGCTGCAGGAGGAAAAGAAGGCCGATTTTGTTTGTTTCTTCTATCGTAGAGATTCTATTCCCATATATGTAAGCATCCCTTCTCTTTCTTTCTCTCTTTCTCTCATGAATTTAATTTTACTCATATGATGTTCATAAGTTCTTGCCTGCAATGTGTTTGTTCATTTGCCAATGATGGTGGAAGTTGTTTGAAGGTTGCTGCCACTGTCTCTTTTTTTTGTGCTTTTTCGTTAGTTTTAGATTTTTCTTGATCTGGATTGTTGTTTCCTTGAATTCATTTGGTTTTGTTAGATTTCTGCCGGAACTTGACGAAGCTAACATATACGTATTACGAATTATTAGTGCAAACGTTTGAATCAGTTTAGAGGTCTTGAGAACTTCGTTTTTGAGTCGCAAGAACTAAATGTTTGAAATGAAGCTAAATATTATTGTTCTAGCTGGAGCACTGGTGCTCAATCCTCTTATTATGCCCATAGGTCTGTTCCTACTTATTATCGAGGAAGGCTTTGCCTATTCCAAGGCCAATCTCTAGAGATCATAATTAACCATCCAAACCCACTGCTATAAGTTATTGTCTCTTTGGGCTTTCTCTTTCGAGCTTCCCTTCAAGGTTTTTAAAACACGTCTACTAGGGAGAGGTTTCTAGACCCTTATAAAGACTGTTTCGTTCTTCTCCTCAACCGATGTGAGATCTCACAATCCACAACCCGGAAGGGGTGGACACGAGGCGGTGTGCCAGGAAAGACGTTGGGACCCGAAGGGGGGTGGATTGAGGGGTCGCACATCGATTGGAGAAGGGAACGGGGGTGGATTGAGGGGTCTCACATCAATTGGAGTAGGGAATGAGTGCCAGCTAGGACGCAGAGTCTCGAAGGGGGCAGATTGTGAGATCCCATATCGGTTGGGGAGGAGAATGAAGCATTCTTTATAAGGATGTGGAAATCTCTTCCTTGTAGACGCATTTTAGAAACCTCAAGGAAAAGCCCGAAAGGAAAAGTCCAAAGAGGACAATAACTACTAGCAGTGAGCTTAGGTCTGTTACAAATAGTATCAGAGCCAGACACTAGGCGGTGTGCCAGCGAGGACGCTGGGCCCCAAGGGGTGGATTTTGAGATATGGGGAAACAAAACATTCCTTATAAGGGCGTAGAACCTCTCCCTAATAGACGCGTTTTAACACCTTGAGAGGAAGTCTGGAAGGAAAAGTCCAAAGAGAACAATATCTACTAGCGGTGGGTTTGGGCTGCTACGTCATTGATCTAAATTTAGAAAACAGCAAGTATTTTCAATTTGTACTTTTTTCACCTAGGAATTTGAACTCAAGACTTCGGAGGATATCTCCAAACGTCCCAATTCCGAAGCCCTTACCAGTTTCCCCACCACCCTTGGGACGCAAATTCCAAAAATTTCATATTGTCTTTTCTTTTCTGCTCTTTATCTTTGAAGTTATATTATGCTGAGAAACAATCTGAGTCCTCATGAAAGCTGGTCACTGCAGCAAATAAAATCACATGCACAATTGTAATTGTTGTTTGGCTTATTTGTTTTATTTTATTAACATTCACACCAATTTCTACTGGATCATTGAAGAATGGGGGATCATTTTGTGCTGTTGGTGGATCGGTTGCTCACTGAATCAAACCTTGAAGCTACTATTGAGAGATAAAAACATAATTCTTCATCCTATGGCCTCAACAACTGCAGATAATATGATATCTTCCATAGATATAGATATTGAATCCATATCACCTTCCAGTAAACTTGTTGAGTGCAGAATTTGTCATGATGAGGATGATGAATCAAATATGGAAACACCCTGCTCTTGCCGTGGCAGCTTGAAGGTTAGATTTAGTTTAGTCAATACCAACTGGTTTCACTTATAAATAACTCAGATAGCTATTGTTTGAATCCCCCTTTTAAAACTTTATGGCTGACTAAACTGGTTTCAACAATGTTTAGAGAAAATTGTAGAACTAGATTTGTGGCCGTTAAGAATGAGAAACAAAAGTGGGATTGAATCAAATTTCATAATAATGGCTCAGATTGGGCATCCTGTGCTATTCTTGTTTTCCTTTCCCTTTCCAATCCTTATTCCTCGTTGTGTTAGTTTAGATGGTTCATCCTGATAATCAGCTTCCAATTAGTGTCGATAATTGCAGTATGCTCATCGTATGTGCGTTCAGCGGTGGTGCAACGAGAAAGGCAACACAATCTGCGAGATTTGCCACCAGGTTTGTTGTGTTTATATTAAAAAAAGATATCTTTAATGCAGGGCTAAATTTATGGTATCAAGAACTCCTTTTTCTTATCAGGACTTTAAGCCAGGGTACACAGCACCTCCCCATGTGTTTTATAATGAAGGTATTAGCTCACTAATGCATTTCAGGTAAGCCATTAACCAACCTATCTCCCCACAATGCATATAGTTTTCTTGTATATTGAGTTCCTGTTCATACATTTCTTCAACACTTTGATATCAAATTGTGGTCTCAGGGGAAGTTGGGAGATGTCAAGGCTGAACCAGCATGTCCCTGCAGGAATGCTCGATCACGAGTATCTCGATTCCGCGTTCGATGATTTCATCAGTCCCTCTCCATGCAGCGTACTGTGCTGCCGCATAGTTGCAGTAATGGTATTCCCTCTCTCTTCAATTTACTTCATTTGCAGTTTCCTTATCTCTGTAAACCAATTTTAAGTGTCTTGGCAATTGGCCTTGCTTTCTGCTGATTGAAAAGTATTACATGTTTTTGCTCGTTGATTCATTTTCATTGACTTATTGAGGCACCAAAGAAATTTAAAATACAGTATTTGGAAATTTAAAGACGAAAATGCAAGGAGTAAATGTTGAGAATTGTTGGAAGGGAGTCTTACTTTGGCTAATTTAGGAAATGATTATGGGTTTATAAGTAAGGAATACATCTATATTGGTATGAGACCTTTTGGAGAAGCTGAAAGCAAAGCCATGAGAGCTTATACTCAAAGTGGACAATATCATACTATTGTGGGTTCGTGATTTCTAACATGGTATTAGAGTCATGCCCTTAACTTAGCCATGTCAATAGAATCCTCAAATGTTGAACAAAGAAGTTGTGAGCCTCGAAGGTGTAGCCAAAATTGACTCTAGTGTCGAACAAAGGGAGTGTACTTTGTTCGAGGACTCTAGAGAAGGAGTCGAGCCTCGATTAAGAGGAGACTGTTCGAGGGCTCCATAGGGCTCGGGGGAGGCTCTGTAGTGTACTTTGTTCAAGGGAAAGATTGTTGAAGATAGTTCATTGGCTAATTTAGGGAATGATCATGGGTTTATAAGTAAGAAATACATTTCCATTGGTATGAAACCTTTTGGGGAAGCCCAAAGCAAAGCTACAAGAGCGGACAATATCATACCATTGTGGAGAGTCGTCATTCCTAAGAGTAAAAAGTTCAACAAATGTGGAGGAATGGATTTGAACCTCGAACCTCCACGAAAAGAGTAGATGCTTTAAACGCTAAGCTATGTTCATATTTGCAACTAAGATATTATTTAGCCTATTATTTTTTTTCTCGTATTTCTATCATTATGACAGTTGGATTGACCTGAAACCCTCAGTTTGAAACTGCTAATCATATCTGTATGTTGCAGTTCATCGTCCTCCTTGTTTTACGCCATACTCTACCGATTATAATTAGTGGAGCTGGAGAGTATTCACTGACATTGTTAATGGTAAGTTTGTTGCTCGGCCTTCCTCCATTGCTTAGACCAATGAAGAGCCACAAGTTCATGTTCTGTGTATTGCAGTTGCTGATCTTGAGAATTGTTGGGATTCTTCTGCCTATATATGTCATGGTTAGGGTATTTACTTCCATTCGAAGACGGCGTCATTATCAGGTTAGTGATCCGGTTGATATCTAGAATTGATATGCATAGCATTTAGTCGTTTCAATGGCTCAGACTCCCGATGGAGCTGTGAGTTAGAAGTGTCATGTTTGATATCAATATTTGTTGGTGTGAGATCCCACATCAGTTGGAGAGGAGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCTCTAGCATACGTGTTTTAAAAGTTTTGAGGGAAAGCCCAAAAGGGAAAGTCCAGAGAGTATAATATCTGCTAGCGGTGGGCTTGAGCTGTTACAGTTCGACTATTTCAAGGTTTAGTCTTTGAACTTTCGGGTTTATATCTATTTGATCTTTTAAGTTTAAGAAGTGTCGTTTAGGTCTCTAAACTTTCAACTACATATCCAAAAAGTCCATGAAGTTTAAGAAGTGTCTAATAAGTTTTTAAACTTTCAATTATATACTTTCTGATAGGATCCCCCTCATCACCTCGCAACATCAGATGACGAAAGTGACTCGATGAGCCATTCTCAACCACGCTTCATCAACATGAGATAG

mRNA sequence

TTGTTTGTTCAACTGGGTTACTGATACATCAATTTTTCTGTCAATCAAGGTAATGGAGCAGTTATAAGAACACTCCATCTCTTGCTTCCTCATTGGAAAAGCGGCTGCAGGAGGAAAAGAAGGCCGATTTTGTTTGTTTCTTCTATCGTAGAGATTCTATTCCCATATATAATGGGGGATCATTTTGTGCTGTTGGTGGATCGGTTGCTCACTGAATCAAACCTTGAAGCTACTATTGAGAGATAAAAACATAATTCTTCATCCTATGGCCTCAACAACTGCAGATAATATGATATCTTCCATAGATATAGATATTGAATCCATATCACCTTCCAGTAAACTTGTTGAGTGCAGAATTTGTCATGATGAGGATGATGAATCAAATATGGAAACACCCTGCTCTTGCCGTGGCAGCTTGAAGTATGCTCATCGTATGTGCGTTCAGCGGTGGTGCAACGAGAAAGGCAACACAATCTGCGAGATTTGCCACCAGGACTTTAAGCCAGGGTACACAGCACCTCCCCATGTGTTTTATAATGAAGGTATTAGCTCACTAATGCATTTCAGGGGAAGTTGGGAGATGTCAAGGCTGAACCAGCATGTCCCTGCAGGAATGCTCGATCACGAGTATCTCGATTCCGCGTTCGATGATTTCATCAGTCCCTCTCCATGCAGCGTACTGTGCTGCCGCATAGTTGCAGTAATGTTCATCGTCCTCCTTGTTTTACGCCATACTCTACCGATTATAATTAGTGGAGCTGGAGAGTATTCACTGACATTGTTAATGTTGCTGATCTTGAGAATTGTTGGGATTCTTCTGCCTATATATGTCATGGTTAGGGTATTTACTTCCATTCGAAGACGGCGTCATTATCAGGATCCCCCTCATCACCTCGCAACATCAGATGACGAAAGTGACTCGATGAGCCATTCTCAACCACGCTTCATCAACATGAGATAG

Coding sequence (CDS)

ATGGCCTCAACAACTGCAGATAATATGATATCTTCCATAGATATAGATATTGAATCCATATCACCTTCCAGTAAACTTGTTGAGTGCAGAATTTGTCATGATGAGGATGATGAATCAAATATGGAAACACCCTGCTCTTGCCGTGGCAGCTTGAAGTATGCTCATCGTATGTGCGTTCAGCGGTGGTGCAACGAGAAAGGCAACACAATCTGCGAGATTTGCCACCAGGACTTTAAGCCAGGGTACACAGCACCTCCCCATGTGTTTTATAATGAAGGTATTAGCTCACTAATGCATTTCAGGGGAAGTTGGGAGATGTCAAGGCTGAACCAGCATGTCCCTGCAGGAATGCTCGATCACGAGTATCTCGATTCCGCGTTCGATGATTTCATCAGTCCCTCTCCATGCAGCGTACTGTGCTGCCGCATAGTTGCAGTAATGTTCATCGTCCTCCTTGTTTTACGCCATACTCTACCGATTATAATTAGTGGAGCTGGAGAGTATTCACTGACATTGTTAATGTTGCTGATCTTGAGAATTGTTGGGATTCTTCTGCCTATATATGTCATGGTTAGGGTATTTACTTCCATTCGAAGACGGCGTCATTATCAGGATCCCCCTCATCACCTCGCAACATCAGATGACGAAAGTGACTCGATGAGCCATTCTCAACCACGCTTCATCAACATGAGATAG

Homology

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BLAST of CmoCh01G003610 vs. Swiss-Prot
Match: MARH2_MOUSE (E3 ubiquitin-protein ligase MARCH2 OS=Mus musculus GN=March2 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.9e-08
Identity = 21/62 (33.87%), Postives = 36/62 (58.06%), Query Frame = 1


Query: 17  IESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQRWCNEKGNTICEICHQ 76
           I ++   S    CRICH+  +  N+ +PC C G+L   H+ C+++W +    + CE+CH 
Sbjct: 52  IRALDSQSDCPFCRICHEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHT 111

Query: 77  DF 79
           +F
Sbjct: 112 EF 113

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BLAST of CmoCh01G003610 vs. Swiss-Prot
Match: MARH2_RAT (E3 ubiquitin-protein ligase MARCH2 OS=Rattus norvegicus GN=March2 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.7e-08
Identity = 21/62 (33.87%), Postives = 36/62 (58.06%), Query Frame = 1


Query: 17  IESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQRWCNEKGNTICEICHQ 76
           I ++   S    CRICH+  +  N+ +PC C G+L   H+ C+++W +    + CE+CH 
Sbjct: 52  IRALDTPSDCPFCRICHEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHT 111

Query: 77  DF 79
           +F
Sbjct: 112 EF 113

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BLAST of CmoCh01G003610 vs. Swiss-Prot
Match: MARH3_BOVIN (E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 22/70 (31.43%), Postives = 40/70 (57.14%), Query Frame = 1


Query: 9   MISSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQRWCNEKGN 68
           ++S++   + + SP +    CRICH+   + ++ +PC C G+L   HR C++ W +    
Sbjct: 51  LLSTVVRTLATQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNT 110

Query: 69  TICEICHQDF 79
           + CE+CH  F
Sbjct: 111 SYCELCHFRF 120

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BLAST of CmoCh01G003610 vs. Swiss-Prot
Match: MARH3_HUMAN (E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 22/70 (31.43%), Postives = 40/70 (57.14%), Query Frame = 1


Query: 9   MISSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQRWCNEKGN 68
           ++S++   + + SP +    CRICH+   + ++ +PC C G+L   HR C++ W +    
Sbjct: 51  LLSTVVRTLATQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNT 110

Query: 69  TICEICHQDF 79
           + CE+CH  F
Sbjct: 111 SYCELCHFRF 120

[Close]

BLAST of CmoCh01G003610 vs. Swiss-Prot
Match: MARH3_MOUSE (E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 22/70 (31.43%), Postives = 40/70 (57.14%), Query Frame = 1


Query: 9   MISSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQRWCNEKGN 68
           ++S++   + + SP +    CRICH+   + ++ +PC C G+L   HR C++ W +    
Sbjct: 51  LLSTVVRTLATQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNT 110

Query: 69  TICEICHQDF 79
           + CE+CH  F
Sbjct: 111 SYCELCHFRF 120

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BLAST of CmoCh01G003610 vs. TrEMBL
Match: A0A0A0LBM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G186720 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 4.2e-91
Identity = 174/233 (74.68%), Postives = 195/233 (83.69%), Query Frame = 1


Query: 1   MASTTA--DNMISSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMC 60
           MAST A  DNMISS +ID+ES+SPSS +V+CRICHDEDD S METPCSC GSLKYAHR C
Sbjct: 32  MASTNANADNMISSSNIDVESVSPSS-IVQCRICHDEDDGSKMETPCSCCGSLKYAHRKC 91

Query: 61  VQRWCNEKGNTICEICHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLNQHVPAGML 120
           +QRWCNEKG+TICEICHQDFKPGYT+PP VFY   I+S +HFRGSWEMSRLN HVPAGM 
Sbjct: 92  IQRWCNEKGDTICEICHQDFKPGYTSPPPVFYYGDINSPIHFRGSWEMSRLNLHVPAGMP 151

Query: 121 DHEYLDSAFDDFISPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGEYSLTLLMLLIL 180
           DHEYLDS FDDF +PSP S+LCCR+VAV+FI LLVLRHTLPI+ISGAG YS TLLMLLIL
Sbjct: 152 DHEYLDSDFDDFFAPSPRSILCCRVVAVIFIALLVLRHTLPIVISGAGGYSWTLLMLLIL 211

Query: 181 RIVGILLPIYVMVRVFTSIRRRRHYQDPPHHLATSDDESDSMSHSQPRFINMR 232
           RIVGILLPIYVMV+ FT I+RR  YQ P   L T  D S+S +HSQ   I++R
Sbjct: 212 RIVGILLPIYVMVKAFTYIQRRHRYQAPRLQLTTLGDNSESTNHSQSHLIHLR 263

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BLAST of CmoCh01G003610 vs. TrEMBL
Match: A0A061EGA0_THECC (RING/FYVE/PHD zinc finger superfamily protein OS=Theobroma cacao GN=TCM_019300 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.3e-72
Identity = 146/236 (61.86%), Postives = 183/236 (77.54%), Query Frame = 1


Query: 1   MASTTADNMI--SSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMC 60
           M+S + D+MI  SS  +D    S  SKLVECRICHDED++ NME PCSCRGSLKYAHR C
Sbjct: 32  MSSASKDDMIEFSSHRMDENVGSSPSKLVECRICHDEDEDLNMEIPCSCRGSLKYAHRKC 91

Query: 61  VQRWCNEKGNTICEICHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLNQHVPAGML 120
           VQRWCNEKG+TICEICHQ F+PGYTAPP +F+  G+   M+FRG+WE+SR +   P  + 
Sbjct: 92  VQRWCNEKGDTICEICHQQFRPGYTAPPPLFHYGGVP--MNFRGNWEISRRDLPAPRFIT 151

Query: 121 ----DHEYLDSAFDDFISPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGEYSLTLLM 180
               D ++L+S FDD+ +PS  S++CCR++A++F+VLLVLRHTLPIIISGAG+YSLTL  
Sbjct: 152 MVTTDRDFLESDFDDYSAPSSRSLICCRVIAIIFMVLLVLRHTLPIIISGAGDYSLTLFT 211

Query: 181 LLILRIVGILLPIYVMVRVFTSIRRRRHYQDPPHHLATSDDESDSMSHSQP--RFI 229
           LL+LR VGILLPIY+MV+ FT+I+RRRH+QDP   LA SD+ES+     QP  RFI
Sbjct: 212 LLMLRTVGILLPIYIMVKAFTAIQRRRHHQDPRFSLAASDEESELPQLQQPHSRFI 265

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BLAST of CmoCh01G003610 vs. TrEMBL
Match: A0A067JFQ8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02514 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.7e-71
Identity = 143/233 (61.37%), Postives = 179/233 (76.82%), Query Frame = 1


Query: 4   TTADNMISSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQRWC 63
           TT D     +D+D  S   SSKLVECRICHDED++ NME PCSC GSLKYAHR CVQRWC
Sbjct: 39  TTTDFSPDRMDLDFRS--SSSKLVECRICHDEDEDMNMEVPCSCCGSLKYAHRKCVQRWC 98

Query: 64  NEKGNTICEICHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLNQHVPAGML----D 123
           NEKG+T+CEICHQ FKPGYTAPP +F+  GI   M+FRG+WE++R + + P  +     D
Sbjct: 99  NEKGDTVCEICHQQFKPGYTAPPPLFHYGGIP--MNFRGNWEITRRDLNNPGFIAMVTTD 158

Query: 124 HEYLDSAFDDFISPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGEYSLTLLMLLILR 183
            +++ S F+D+ +PSP S++CCRIVA++F+VLLVLRHTLPIIISGAG+YS TL MLLILR
Sbjct: 159 RDFVGSDFEDYSAPSPRSLMCCRIVAIIFMVLLVLRHTLPIIISGAGDYSTTLFMLLILR 218

Query: 184 IVGILLPIYVMVRVFTSIRRRRHYQDPPHHLATSDDESD-SMSHSQPRFINMR 232
            +GILLPIYVMV+ FT+I+RRRH QDP   LA SD E++      Q RF+++R
Sbjct: 219 TIGILLPIYVMVKAFTAIQRRRHQQDPRFSLAASDGENELPQLQPQSRFVHIR 267

[Close]

BLAST of CmoCh01G003610 vs. TrEMBL
Match: M5WTM7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010144mg PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.2e-69
Identity = 139/221 (62.90%), Postives = 172/221 (77.83%), Query Frame = 1


Query: 3   STTADNMISSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQRW 62
           + + D M SS  ID+   S SSK V+CRICHDEDD+SNMETPCSC GSLKYAHR CVQRW
Sbjct: 34  TASQDTMDSSHKIDVNG-SSSSKFVQCRICHDEDDDSNMETPCSCCGSLKYAHRKCVQRW 93

Query: 63  CNEKGNTICEICHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLN----QHVPAGML 122
           CNEKG+TICEICHQ F P YTAPP +F+  GI   M+FRG+WE+SR +    Q +     
Sbjct: 94  CNEKGDTICEICHQQFTPDYTAPPPLFHYSGIP--MNFRGNWEISRRDLQNPQFIAMVTA 153

Query: 123 DHEYLDSAFDD-FISPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGEYSLTLLMLLI 182
           DHEY+++ FDD + +PS  S++CCR+VA++F+VLLVLRHTLP +ISGAGEYSLTL  LL+
Sbjct: 154 DHEYMNTDFDDEYSAPSSRSLICCRVVAIIFMVLLVLRHTLPFLISGAGEYSLTLFTLLM 213

Query: 183 LRIVGILLPIYVMVRVFTSIRRRRHYQDPPHHLATSDDESD 219
           LR +GIL PIY+MVR FT+I+R+R  QDP   LATSD+E+D
Sbjct: 214 LRTIGILFPIYIMVRAFTAIQRQRRQQDPEISLATSDEEND 251

[Close]

BLAST of CmoCh01G003610 vs. TrEMBL
Match: B9H350_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09240g PE=4 SV=2)

HSP 1 Score: 270.4 bits (690), Expect = 2.0e-69
Identity = 139/224 (62.05%), Postives = 172/224 (76.79%), Query Frame = 1


Query: 1   MASTTADNM--ISSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMC 60
           MAS + +N    S   +D+E  S + K VECRICH+E+D+ NME PCSCRGSLKYAHR C
Sbjct: 32  MASASKENTKEFSPHWMDLELTSLAGKSVECRICHEEEDDMNMEMPCSCRGSLKYAHRKC 91

Query: 61  VQRWCNEKGNTICEICHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLNQHVPAGML 120
           VQRWCNEKGNTICEICHQ F+PGYTAPP +F    I   M+FRG+WE+ R + H P  + 
Sbjct: 92  VQRWCNEKGNTICEICHQQFEPGYTAPPPLFCYGAIP--MNFRGNWEIPRRDLHNPPSIA 151

Query: 121 ----DHEYLDSAFDDFISPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGEYSLTLLM 180
               DHE+LDS FD++ +PSP SV+CCRI+A++F+VLLVLRHTL I+ISGAG+YS+TL M
Sbjct: 152 MVTTDHEFLDSDFDEYSAPSPRSVMCCRIIAIIFMVLLVLRHTLAILISGAGDYSMTLFM 211

Query: 181 LLILRIVGILLPIYVMVRVFTSIRRRRHYQDPPHHLATSDDESD 219
           LLILR VGILLP+YVMVR FT+I+ R   QDP   LA SD+E++
Sbjct: 212 LLILRTVGILLPVYVMVRAFTAIQHRGRQQDPHFPLAESDEENE 253

[Close]

BLAST of CmoCh01G003610 vs. TAIR10
Match: AT5G38070.1 (AT5G38070.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 189.5 bits (480), Expect = 2.3e-48
Identity = 103/219 (47.03%), Postives = 145/219 (66.21%), Query Frame = 1


Query: 6   ADNMISSIDID--IESISPS-----SKLVECRICHDEDDESNMETPCSCRGSLKYAHRMC 65
           AD    S++ D   ESIS       SK V+CRICHDED+++NM+TPCSC G+LK+AH  C
Sbjct: 24  ADPKADSVNEDGVSESISAGADLCESKFVQCRICHDEDEDTNMDTPCSCSGTLKFAHHNC 83

Query: 66  VQRWCNEKGNTICEICHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLNQHVPAGML 125
           VQRWCNEKG+T+CEIC Q +KPGYTAP  +F+  GIS  M+F   W +  L+   P   L
Sbjct: 84  VQRWCNEKGDTVCEICRQQYKPGYTAPRQLFHYTGIS--MNFGSDWGIEGLDLRNPY-FL 143

Query: 126 DHEYLDSAFDDFISPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGEYSLTLLMLLIL 185
                D   D +   SP S++CCR++A++F++LL LRH+LP+++ G  ++S+TLLML ++
Sbjct: 144 TWGDADDDHDLYSFHSPTSLICCRLIALLFVLLLFLRHSLPVLLGGVDDFSITLLMLPLV 203

Query: 186 RIVGILLPIYVMVRVFTSIRRRRHYQDPPHHLATSDDES 218
           R +GILL  YV  + F  I+R R  +D      +SD+E+
Sbjct: 204 RTLGILLIAYVFFKSFIVIQRCRQERDTRLSGFSSDEET 239

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BLAST of CmoCh01G003610 vs. TAIR10
Match: AT2G01275.1 (AT2G01275.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 188.3 bits (477), Expect = 5.1e-48
Identity = 98/209 (46.89%), Postives = 137/209 (65.55%), Query Frame = 1


Query: 26  LVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQRWCNEKGNTICEICHQDFKPGYTAP 85
           + ECRICHDED +SNMETPCSC GS+KYAHR CVQRWCNEKG+T CEICHQ+FKP YTAP
Sbjct: 56  MAECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAP 115

Query: 86  PHVFYNEGISSLMHFRGSWEMS-RLNQHVPAGMLDHEYLDSAFDDFISPSPCSVLCCRIV 145
           P +     +   +HFRG+W +S R ++ +     D  ++D  +      S  S +CCR +
Sbjct: 116 PPLLELGHVP--LHFRGNWGISQREHRFITVVPADSTFIDQPYP---LSSTTSFICCRSL 175

Query: 146 AVMFIVLLVLRHTLPIIISGAGEYSLTLLMLLILRIVGILLPIYVMVRVFTSIRRRRHYQ 205
            ++F+ LL+LRHTLP++++G+  +   L  LL LRI+GI+LPIYV+ +   + RR     
Sbjct: 176 VLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCRRHSRTL 235

Query: 206 DPPHHLATSDDESDS--MSHSQPRFINMR 232
           D      +SD+E+DS  +  +Q   I +R
Sbjct: 236 DTSPSDDSSDEETDSWRLPQTQSYIIGVR 259

[Close]

BLAST of CmoCh01G003610 vs. TAIR10
Match: AT1G14260.1 (AT1G14260.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 146.4 bits (368), Expect = 2.2e-35
Identity = 84/209 (40.19%), Postives = 115/209 (55.02%), Query Frame = 1


Query: 6   ADNMISSIDIDIESISPSSKLV---ECRICHDEDDESNMETPCSCRGSLKYAHRMCVQRW 65
           ADN I   D D         L+   ECRIC DE D  N+E+PC+C GSLKYAHR CVQRW
Sbjct: 31  ADNAIDIYDGDTTENEEEDSLISSAECRICQDECDIKNLESPCACNGSLKYAHRKCVQRW 90

Query: 66  CNEKGNTICEICHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLNQHVP----AGML 125
           CNEKGNTICEICHQ ++ GYT+PP    +E   + +   G W +S L+   P        
Sbjct: 91  CNEKGNTICEICHQPYQAGYTSPPPPPQSE--ETTIDIGGGWRISGLDLDDPRLLAIAEA 150

Query: 126 DHEYLDSAFDDFISPSPCSVLCCRIVAVMFIVLLVLRH--TLPIIISGAGEYSLTLLMLL 185
           + + L+S +DD+ +         R  A++ + LL+LRH  T+P       +   ++L L 
Sbjct: 151 ERQILESEYDDYTASDTSGAAFFRSAALILMTLLLLRHALTIPDYSDSEDDDPSSILSLF 210

Query: 186 ILRIVGILLPIYVMVRVFTSIRRRRHYQD 206
           +LR    LLP Y+M    + + RRR  Q+
Sbjct: 211 LLRAASFLLPCYIMASAISILHRRRQRQE 237

[Close]

BLAST of CmoCh01G003610 vs. TAIR10
Match: AT5G62460.1 (AT5G62460.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 141.7 bits (356), Expect = 5.5e-34
Identity = 77/197 (39.09%), Postives = 113/197 (57.36%), Query Frame = 1


Query: 14  DIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQRWCNEKGNTICEI 73
           D+D E   P  + VECRIC +ED   N+E+PCSC GSLKYAHR CVQRWCNEKG+T CEI
Sbjct: 64  DVDDEE-EPLIQSVECRICQEEDSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEI 123

Query: 74  CHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLN--QHVPAGMLDHEYLDSAFDDFI 133
           CH+ ++PGYTAPP    ++ I  +    G+     LN  + +     +  + D+ +D++ 
Sbjct: 124 CHKSYQPGYTAPPPPPADDTIIDIGEDWGNGVHLDLNDPRILAMAAAERHFFDADYDEYA 183

Query: 134 SPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGEYS---LTLLMLLILRIVGILLPIY 193
             +      CR  A++ + LL+LRH L +  + + +          L +LR  G LLP Y
Sbjct: 184 DSNSSGAAFCRSAALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGFLLPCY 243

Query: 194 VMVRVFTSIRRRRHYQD 206
           +M    + ++RRR  Q+
Sbjct: 244 IMAWAISILQRRRQRQE 259

[Close]

BLAST of CmoCh01G003610 vs. TAIR10
Match: AT2G02960.5 (AT2G02960.5 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 138.3 bits (347), Expect = 6.1e-33
Identity = 74/162 (45.68%), Postives = 94/162 (58.02%), Query Frame = 1


Query: 10  ISSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQRWCNEKGNT 69
           IS  D D E+  P     ECRIC DE    N+E+PC+C GSLKYAHR CVQRWCNEKGN 
Sbjct: 25  ISDDDHDDEN-EPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNI 84

Query: 70  ICEICHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLNQHVP----AGMLDHEYLDS 129
           ICEICHQ ++PGYTAPP     E   + +   G W +S L+ H P        +  YL+S
Sbjct: 85  ICEICHQPYQPGYTAPPPPLQPE--ETTIDIGGGWTISGLDVHDPRLLAIAEAERRYLES 144

Query: 130 AFDDFISPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGE 168
            + ++ + S      CR  A++ + LL+LRH L I     GE
Sbjct: 145 EYVEYTASSASGAAFCRSAALILMALLLLRHALTITDDTDGE 183

[Close]

BLAST of CmoCh01G003610 vs. NCBI nr
Match: gi|778679853|ref|XP_004140823.2| (PREDICTED: E3 ubiquitin-protein ligase MARCH2-like [Cucumis sativus])

HSP 1 Score: 342.4 bits (877), Expect = 6.0e-91
Identity = 174/233 (74.68%), Postives = 195/233 (83.69%), Query Frame = 1


Query: 1   MASTTA--DNMISSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMC 60
           MAST A  DNMISS +ID+ES+SPSS +V+CRICHDEDD S METPCSC GSLKYAHR C
Sbjct: 32  MASTNANADNMISSSNIDVESVSPSS-IVQCRICHDEDDGSKMETPCSCCGSLKYAHRKC 91

Query: 61  VQRWCNEKGNTICEICHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLNQHVPAGML 120
           +QRWCNEKG+TICEICHQDFKPGYT+PP VFY   I+S +HFRGSWEMSRLN HVPAGM 
Sbjct: 92  IQRWCNEKGDTICEICHQDFKPGYTSPPPVFYYGDINSPIHFRGSWEMSRLNLHVPAGMP 151

Query: 121 DHEYLDSAFDDFISPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGEYSLTLLMLLIL 180
           DHEYLDS FDDF +PSP S+LCCR+VAV+FI LLVLRHTLPI+ISGAG YS TLLMLLIL
Sbjct: 152 DHEYLDSDFDDFFAPSPRSILCCRVVAVIFIALLVLRHTLPIVISGAGGYSWTLLMLLIL 211

Query: 181 RIVGILLPIYVMVRVFTSIRRRRHYQDPPHHLATSDDESDSMSHSQPRFINMR 232
           RIVGILLPIYVMV+ FT I+RR  YQ P   L T  D S+S +HSQ   I++R
Sbjct: 212 RIVGILLPIYVMVKAFTYIQRRHRYQAPRLQLTTLGDNSESTNHSQSHLIHLR 263

[Close]

BLAST of CmoCh01G003610 vs. NCBI nr
Match: gi|1009128326|ref|XP_015881170.1| (PREDICTED: uncharacterized protein LOC107417121 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 286.6 bits (732), Expect = 3.9e-74
Identity = 149/233 (63.95%), Postives = 184/233 (78.97%), Query Frame = 1


Query: 3   STTADNMISSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQRW 62
           S + DNMISS  ID+   SP  KLVECRICHDED+ SNMETPCSC GSLKYAHR CVQRW
Sbjct: 34  SKSQDNMISSHKIDVNMRSPC-KLVECRICHDEDEASNMETPCSCCGSLKYAHRKCVQRW 93

Query: 63  CNEKGNTICEICHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLNQHVPAGML---- 122
           CNEKG+TICEIC Q F+PGYTAPP +F+  GI   M+FRG+WE+SR + H P  +     
Sbjct: 94  CNEKGDTICEICRQQFRPGYTAPPPLFHYGGIP--MNFRGNWEVSRRDLHNPGFIAMVSA 153

Query: 123 DHEYLDSAFDDFISPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGEYSLTLLMLLIL 182
           + +Y+D+ FD++ +PS  S++CCRIVA++F+VLLVLRHTLPIIISGAGEYS+TL  LL+L
Sbjct: 154 ERDYMDTDFDEYAAPSSRSLICCRIVAIIFMVLLVLRHTLPIIISGAGEYSMTLFTLLML 213

Query: 183 RIVGILLPIYVMVRVFTSIRRRRHYQDPPHHLATSDDESDSMSHSQPRFINMR 232
           R +GILLP+Y+MV+ FT+I+RRRH QD    LATSD+E+DS    QPRFI +R
Sbjct: 214 RTIGILLPVYIMVKAFTAIQRRRHRQDSHLPLATSDEENDS-PLPQPRFIQIR 262

[Close]

BLAST of CmoCh01G003610 vs. NCBI nr
Match: gi|590652324|ref|XP_007033119.1| (RING/FYVE/PHD zinc finger superfamily protein [Theobroma cacao])

HSP 1 Score: 279.6 bits (714), Expect = 4.8e-72
Identity = 146/236 (61.86%), Postives = 183/236 (77.54%), Query Frame = 1


Query: 1   MASTTADNMI--SSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMC 60
           M+S + D+MI  SS  +D    S  SKLVECRICHDED++ NME PCSCRGSLKYAHR C
Sbjct: 32  MSSASKDDMIEFSSHRMDENVGSSPSKLVECRICHDEDEDLNMEIPCSCRGSLKYAHRKC 91

Query: 61  VQRWCNEKGNTICEICHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLNQHVPAGML 120
           VQRWCNEKG+TICEICHQ F+PGYTAPP +F+  G+   M+FRG+WE+SR +   P  + 
Sbjct: 92  VQRWCNEKGDTICEICHQQFRPGYTAPPPLFHYGGVP--MNFRGNWEISRRDLPAPRFIT 151

Query: 121 ----DHEYLDSAFDDFISPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGEYSLTLLM 180
               D ++L+S FDD+ +PS  S++CCR++A++F+VLLVLRHTLPIIISGAG+YSLTL  
Sbjct: 152 MVTTDRDFLESDFDDYSAPSSRSLICCRVIAIIFMVLLVLRHTLPIIISGAGDYSLTLFT 211

Query: 181 LLILRIVGILLPIYVMVRVFTSIRRRRHYQDPPHHLATSDDESDSMSHSQP--RFI 229
           LL+LR VGILLPIY+MV+ FT+I+RRRH+QDP   LA SD+ES+     QP  RFI
Sbjct: 212 LLMLRTVGILLPIYIMVKAFTAIQRRRHHQDPRFSLAASDEESELPQLQQPHSRFI 265

[Close]

BLAST of CmoCh01G003610 vs. NCBI nr
Match: gi|802761989|ref|XP_012089929.1| (PREDICTED: uncharacterized protein LOC105648219 [Jatropha curcas])

HSP 1 Score: 277.3 bits (708), Expect = 2.4e-71
Identity = 143/233 (61.37%), Postives = 179/233 (76.82%), Query Frame = 1


Query: 4   TTADNMISSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQRWC 63
           TT D     +D+D  S   SSKLVECRICHDED++ NME PCSC GSLKYAHR CVQRWC
Sbjct: 39  TTTDFSPDRMDLDFRS--SSSKLVECRICHDEDEDMNMEVPCSCCGSLKYAHRKCVQRWC 98

Query: 64  NEKGNTICEICHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLNQHVPAGML----D 123
           NEKG+T+CEICHQ FKPGYTAPP +F+  GI   M+FRG+WE++R + + P  +     D
Sbjct: 99  NEKGDTVCEICHQQFKPGYTAPPPLFHYGGIP--MNFRGNWEITRRDLNNPGFIAMVTTD 158

Query: 124 HEYLDSAFDDFISPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGEYSLTLLMLLILR 183
            +++ S F+D+ +PSP S++CCRIVA++F+VLLVLRHTLPIIISGAG+YS TL MLLILR
Sbjct: 159 RDFVGSDFEDYSAPSPRSLMCCRIVAIIFMVLLVLRHTLPIIISGAGDYSTTLFMLLILR 218

Query: 184 IVGILLPIYVMVRVFTSIRRRRHYQDPPHHLATSDDESD-SMSHSQPRFINMR 232
            +GILLPIYVMV+ FT+I+RRRH QDP   LA SD E++      Q RF+++R
Sbjct: 219 TIGILLPIYVMVKAFTAIQRRRHQQDPRFSLAASDGENELPQLQPQSRFVHIR 267

[Close]

BLAST of CmoCh01G003610 vs. NCBI nr
Match: gi|658044967|ref|XP_008358156.1| (PREDICTED: E3 ubiquitin-protein ligase MARCH2-like [Malus domestica])

HSP 1 Score: 276.6 bits (706), Expect = 4.1e-71
Identity = 145/233 (62.23%), Postives = 178/233 (76.39%), Query Frame = 1


Query: 4   TTADNMISSIDIDIESISPSSKLVECRICHDEDDESNMETPCSCRGSLKYAHRMCVQRWC 63
           T  D M SS  ID+ ++S  SK V+CRICHDEDD+SNME PCSC GSLKYAHR CVQ+WC
Sbjct: 35  TXQDIMESSHQIDMNTLSSPSKFVQCRICHDEDDDSNMEAPCSCCGSLKYAHRKCVQKWC 94

Query: 64  NEKGNTICEICHQDFKPGYTAPPHVFYNEGISSLMHFRGSWEMSRLNQHVPAGM----LD 123
           NEKG+TICEICHQ FKP YTAPP +++  GI   M+FRG+WE+SR +   P  +     D
Sbjct: 95  NEKGBTICEICHQQFKPDYTAPPPLYHYSGIP--MNFRGNWEISRRDLQNPGFIAMVTTD 154

Query: 124 HEYLDSAF-DDFISPSPCSVLCCRIVAVMFIVLLVLRHTLPIIISGAGEYSLTLLMLLIL 183
           H YL++ F D++ +PS  S+LCCRIVA++F+VLLVLRHTLPI+ISGAGEYSLTL  L++L
Sbjct: 155 HGYLNTDFADEYSAPSSRSLLCCRIVAIIFMVLLVLRHTLPILISGAGEYSLTLFTLMVL 214

Query: 184 RIVGILLPIYVMVRVFTSIRRRRHYQDPPHHLATSDDESDSMSHSQPRFINMR 232
           R +GIL PIY+MVRVFT I+RRRH QDP    ATSD+E+D    S  RFI +R
Sbjct: 215 RTIGILFPIYIMVRVFTVIQRRRHXQDPQISPATSDEENDFAYPS--RFIQIR 263

The following BLAST results are available for this feature:

BLAST of CmoCh01G003610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MARH2_MOUSE	2.9e-08	33.87	E3 ubiquitin-protein ligase MARCH2 OS=Mus musculus GN=March2 PE=2 SV=1	[more]
MARH2_RAT	3.7e-08	33.87	E3 ubiquitin-protein ligase MARCH2 OS=Rattus norvegicus GN=March2 PE=1 SV=1	[more]
MARH3_BOVIN	1.4e-07	31.43	E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2 SV=1	[more]
MARH3_HUMAN	1.4e-07	31.43	E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=1 SV=1	[more]
MARH3_MOUSE	1.4e-07	31.43	E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2 SV=1	[more]

BLAST of CmoCh01G003610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBM8_CUCSA	4.2e-91	74.68	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G186720 PE=4 SV=1	[more]
A0A061EGA0_THECC	3.3e-72	61.86	RING/FYVE/PHD zinc finger superfamily protein OS=Theobroma cacao GN=TCM_019300 P...	[more]
A0A067JFQ8_JATCU	1.7e-71	61.37	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02514 PE=4 SV=1	[more]
M5WTM7_PRUPE	1.2e-69	62.90	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010144mg PE=4 SV=1	[more]
B9H350_POPTR	2.0e-69	62.05	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09240g PE=4 SV=2	[more]

BLAST of CmoCh01G003610 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G38070.1	2.3e-48	47.03	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.1	5.1e-48	46.89	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G14260.1	2.2e-35	40.19	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G62460.1	5.5e-34	39.09	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.5	6.1e-33	45.68	RING/FYVE/PHD zinc finger superfamily protein	[more]

BLAST of CmoCh01G003610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778679853\|ref\|XP_004140823.2\|	6.0e-91	74.68	PREDICTED: E3 ubiquitin-protein ligase MARCH2-like [Cucumis sativus]	[more]
gi\|1009128326\|ref\|XP_015881170.1\|	3.9e-74	63.95	PREDICTED: uncharacterized protein LOC107417121 isoform X1 [Ziziphus jujuba]	[more]
gi\|590652324\|ref\|XP_007033119.1\|	4.8e-72	61.86	RING/FYVE/PHD zinc finger superfamily protein [Theobroma cacao]	[more]
gi\|802761989\|ref\|XP_012089929.1\|	2.4e-71	61.37	PREDICTED: uncharacterized protein LOC105648219 [Jatropha curcas]	[more]
gi\|658044967\|ref\|XP_008358156.1\|	4.1e-71	62.23	PREDICTED: E3 ubiquitin-protein ligase MARCH2-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011016	Znf_RING-CH
IPR013083	Znf_RING/FYVE/PHD
IPR022143	DUF3675

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G003610.1	CmoCh01G003610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 29..74 score: 7.1
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 28..75 score: 3.9
IPR011016	Zinc finger, RING-CH-type	PROFILE	PS51292	ZF_RING_CH	coord: 21..81 score: 22
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 27..79 score: 1.9
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 80..193 score: 8.7
None	No IPR available	PANTHER	PTHR23012:SF89	SUBFAMILY NOT NAMED	coord: 2..231 score: 1.0
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 27..79 score: 4.59

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G003610	CmaCh14G008610	Cucurbita maxima (Rimu)	cmacmoB257
CmoCh01G003610	CmaCh01G003430	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G003610	Cla013150	Watermelon (97103) v1	cmowmB427
CmoCh01G003610	MELO3C020316	Melon (DHL92) v3.5.1	cmomeB421
CmoCh01G003610	ClCG05G010750	Watermelon (Charleston Gray)	cmowcgB406
CmoCh01G003610	Lsi05G002800	Bottle gourd (USVL1VR-Ls)	cmolsiB430
CmoCh01G003610	Cp4.1LG03g05790	Cucurbita pepo (Zucchini)	cmocpeB453
CmoCh01G003610	Cp4.1LG02g16870	Cucurbita pepo (Zucchini)	cmocpeB449
CmoCh01G003610	MELO3C020316.2	Melon (DHL92) v3.6.1	cmomedB483
CmoCh01G003610	Cla97C05G093070	Watermelon (97103) v2	cmowmbB454
CmoCh01G003610	Bhi01G001326	Wax gourd	cmowgoB0556
CmoCh01G003610	Carg24234	Silver-seed gourd	carcmoB0249
CmoCh01G003610	Carg07435	Silver-seed gourd	carcmoB1033

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G003610	CmoCh14G008760	Cucurbita moschata (Rifu)	cmocmoB203

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G003610	Wild cucumber (PI 183967)	cmocpiB449
CmoCh01G003610	Cucumber (Chinese Long) v2	cmocuB445
CmoCh01G003610	Cucumber (Gy14) v2	cgybcmoB342
CmoCh01G003610	Cucumber (Chinese Long) v3	cmocucB0535
CmoCh01G003610	Cucumber (Gy14) v1	cgycmoB0249