Cp4.1LG02g12680 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGATTCAAAAGGGTAACGTTCAAATATTTAAAATCTTGGTTCGGAGAGGTAGGTTCGGAATTGATTTAATTTAGCCCTCTCGGCTTTACCGATTCGGAAAGCCGTTGTCCGGCCGAAGCTCTCAACTATTGCAGAATCTTCGTCTTCAGCTTTTTTGCTTTGTTCCTTTGAATCTTGAATCTCTGCAATTAGGGCTTTTCTTTCCTCTCTAATTTCCTCTGTTTTCTCTTCCATAAAAACCGCAATTTCCTCTCATCATAGACACCACAAATCCCCAATTATTGGCGAAATTCCTTCCTTAGGGCATTGTGTTACGATTCGCTGATTTGAAATGGCGAAGCGATTGTCGATCGGAAGCAGAGTGCGGAACAAGCTAGCAGATATTACGAATTCCAAGACAATGAGAGCTCATATGGAAGATGAAAGGTCTTCGGAAGCTTGGCGGTCAAATCAAGACGTTGTCGATCAGCTGGTCGAGGTATGCATCAATCTGGTCTCCCTTTGCCTGTTTTTCTTTAATCTGAGATATTCGTTTGATTGGATGTAATTTATGGATCAGGAAAATATGGCTCTGATGAAACTTGTCATGGAGAAGAAGTATCCTTCTGGATTTGCCTTTTCTTCCTCTAAATTCTCTATTATCAATCTCGTTAGCATATCATGTCAATACTATCGTAGTTCATATCTTTTGAAAACAGAACTTTCAAGGAAAACAAATGATTCCTTCACATTTGAACAGTGAAATTATTGATCTGACTGAAGCCGAGCTAAACAAACTTCGTGAATGCATTCAGAAACTGCAGCTTCAGAATTGGCAGCTTGCTCAATCAAACAGTCATTTTTTAGCAGTATGATCATTTATAATTCAGAAACATTTATGATTATCCCTCTCCTATTTTTCATTTCCCTTGACAACTCTGAGACTCTAATTAACTGTTCATCGATTTCCTCTTACAGGAAATCAATTTAGGGAGAGAGAGAGTAAGTTCCCAAGAATCTTGAATTTATCTTTTGCTGCATTTGTTTGAATCTCATTTATGCTCAATAAATTGGTCCTGATGTGTTTCAGATAAAATCACTGGGGCATGAGCTTGAATGCAAGGAGGCCTTGCTAAAAGCAACGCGTTTGAATACTGTGGTACTAACTTTAGACACTTTTTCTTCCTGCAAAGAAAANAAATCACTGGGGCATGAGCTTGAATGCAAGGAGGCCTTGCTAAAAGCAACGCGTTTGAATACTGTGGTACTAACTTTACACACTTTTTCTTCCTGCAAAGAATAGTAGGGATATCTATTTTGTCTAGCTCTGGAATTGTTTCAGTCATTTATGAATATGTTTTCAATAAGTAGTCAGATCATCATTTAGATAATCATTTAGATAATGACAGAGATAATGTTAGAATTGGAACCAAAATTGTAATTTAACCAACAATATGAAATTAGGAGTAATCTTGATCAAGTTATTTTGTGAAGTGATTCGAATCACGAGTTTAGAAATGAGTTTTCTTTACTTTTCATTCTAAAACTTTTCCTTGGATTGATTCCTTGTCGTTTTTTGAGGTTTTTGGATAATTTAGAGTTAAAGGTCTTGCTCTTTAACAAGGTTTTTAGATCAAATCGTAGGAATTTCATAAAACGTATTTATTTGTTATTAACATTTCGACACTCAGCATNGAATATGTTTTCAATAAGTAGTCAGATCATCATTTAGATAATGACAGAGATAATGTTAGAATTGGAACTAAAATTGTAATTTAACCAACAATATGAAATTAATATGAAATTAGGAGTACTCTTGATCAAGTTATTTTGTGAAGTGATTCGAATCACGAGTTTAGAAATGCTTTTGATTCCAAAACTTTTCCTTGGATTGATTCCTTATCGTTTTTTGAGGTTCTTGGATAATTTAGATTTAAAGGTCTTGCTCTTTAACAAGGTTTTTAGATCAAATCGTAGGAATTTCATAAAACGTATTTATTTGTTATTAACATTTCGACACTCAACAATCACAACAGATCCTTACAAACTAGACCCAACTTGCTTTTGGGGAAAACTGAAGCTTATCTTATCAAGATTTAGATTAGCTAGATTAATTTTCTTCAATAGGCAATGAAAAAGTCTTGTATTTTAACAAGAAACTGCTGTATATTCCGACAGGGGAAAGCAGGAATGAATAATGGAAATTCTGGATGGCAGGTAATTGGTAATTTCCTTTTTTTTTTTCTTTCAGGCATCTGCTTTTCTATTCTTTTCATGCCTCAAATTTCACTTAGAACTGTCTTTTTCACCCATTTTTTCCTGGCTTCAGGAAGAAGAGAAGCCAACAGAGCAATTTCCACTTGCGGTTAAAACTGACACCAAAGCTTGCAGTGGAAACAGAAAGCCCTCCGGACGAGCTAGAAATCAATGTATGTTCATGAATTGATGAATATGAACAAAAGCCTAAAAATGTTCCCATTTTAATGCCAATTTATAGCAACTATCCTCACCGTNAGCCCTCCGGACGAGCTAGAAATCAATGTATGTTCATGAATTAATGAACATGAACAAAAGCCTAAAAATGTTCCATTTTACTGCCAATTTATAGCAACTATCCTCACCGTTATGTTAAAATTGTGAGTTGCAGTAAAAAGGGTTTCATAAGAAATTATTCTGATGCTAAGTTCTACTCTTTTGAAAATGCTTTTAATAAAGTTATTCTCTAGGACTGTTTCCTCATAAATCACTTCTAAATCTTTTTCAAGAACATGTTACTCCCAAATGTTAGGATGGTTTTGAGACCATGCCAAGAGGACCTACGTTTGGAATTACGGTTCTCCACGATGGTATGATATTGTCCACTTTGAGTGAGTATAAACTCTCATGGCTTTGCTTTAGGCTTCCCAGCCTAATACCAATGGAGATGAATTCCTTACTTATAAACCCATGATCATNACGGTTCTCCACGATGGTATGATATTGTCCACTTTGAGTGAGCATAAACTCTCATGGCTTTGCTTTAGGCTTCCCCGCCCGATACCAATGGAGATGTATTCCTTACCTATAAACTCATGATCATTTCCTAAATTAGCAGCTAACGTGGGACTCCCTCCACACAATCCTCAACGTCCTAAACCTCCTAAACCTGAAAACTTTATTCTTATTGTCTGGTTGAAAAGTAACGACACTTAAACAACTGCAGCTATGAGCCCTTCAGCTTCATACTCAAAGTGTGCGATGAAGAGAAAGGATGAAAACAAAAGGTACTTACCAATATTTAAACTGGTATTCTTTCAACTTTAGTTACTGCTTTCTTTACATATTTCTGTTTACAGGCATTGTGTAAGAGCACAATCTGGTAGATTTAGATATCAAATGAGACACCATGAAGAGAACTCGTTTGAGATAGAAGAAGACATGAAATTTACTGCTACTGGAGAAGATGAAGAAGAAAGGAAGAACAACAATGTCAATTCACCATCATCATCTTCAGCTCTGCAAAGATCTTATATTGGAAGACCATTGCACAGAGCAGCTGAAAAGATTCAATCCTACAAAGAAGCTCGTCACAACGCTAAAATCAGACGACAAGAATGACAAGTGAGATCAGTATACTGTTTCAGCTAGCAGTTTAAATTTTACTTTCTTGTATGTAGTAGCTATGATTATTCCACCTGTGGCTTGTATTGTTCGTGATGTTTATATATTATTTTGTTTCGAGTGTATGTATAGTGTAAATTATGTAACTGTCAAAGAGAAGAGATTCGAACTTCTAACTTCTTAAAAAGGAGACGATGTTGTAATTGAAATTTGACATTTTGGAGTAAGAAATTCGAACCTCTATTCTTTTAATAATCTTGATTTGGATAGTATAGTCGATGAATTTGACTCATGATCTGTAATGATAGCCATTTAACAA GGATTCAAAAGGGTAACGTTCAAATATTTAAAATCTTGGTTCGGAGAGGTAGGTTCGGAATTGATTTAATTTAGCCCTCTCGGCTTTACCGATTCGGAAAGCCGTTGTCCGGCCGAAGCTCTCAACTATTGCAGAATCTTCGTCTTCAGCTTTTTTGCTTTGTTCCTTTGAATCTTGAATCTCTGCAATTAGGGCTTTTCTTTCCTCTCTAATTTCCTCTGTTTTCTCTTCCATAAAAACCGCAATTTCCTCTCATCATAGACACCACAAATCCCCAATTATTGGCGAAATTCCTTCCTTAGGGCATTGTGTTACGATTCGCTGATTTGAAATGGCGAAGCGATTGTCGATCGGAAGCAGAGTGCGGAACAAGCTAGCAGATATTACGAATTCCAAGACAATGAGAGCTCATATGGAAGATGAAAGGTCTTCGGAAGCTTGGCGGTCAAATCAAGACGTTGTCGATCAGCTGGTCGAGGAAAATATGGCTCTGATGAAACTTGTCATGGAGAAGAATGAAATTATTGATCTGACTGAAGCCGAGCTAAACAAACTTCGTGAATGCATTCAGAAACTGCAGCTTCAGAATTGGCAGCTTGCTCAATCAAACAGTCATTTTTTAGCAGAAATCAATTTAGGGAGAGAGAGAATAAAATCACTGGGGCATGAGCTTGAATGCAAGGAGGCCTTGCTAAAAGCAACGCGTTTGAATACTGTGGGGAAAGCAGGAATGAATAATGGAAATTCTGGATGGCAGGAAGAAGAGAAGCCAACAGAGCAATTTCCACTTGCGGTTAAAACTGACACCAAAGCTTGCAGTGGAAACAGAAAGCCCTCCGGACGAGCTAGAAATCAATCTATGAGCCCTTCAGCTTCATACTCAAAGTGTGCGATGAAGAGAAAGGATGAAAACAAAAGGCATTGTGTAAGAGCACAATCTGGTAGATTTAGATATCAAATGAGACACCATGAAGAGAACTCGTTTGAGATAGAAGAAGACATGAAATTTACTGCTACTGGAGAAGATGAAGAAGAAAGGAAGAACAACAATGTCAATTCACCATCATCATCTTCAGCTCTGCAAAGATCTTATATTGGAAGACCATTGCACAGAGCAGCTGAAAAGATTCAATCCTACAAAGAAGCTCGTCACAACGCTAAAATCAGACGACAAGAATGACAAGTGAGATCAGTATACTGTTTCAGCTAGCAGTTTAAATTTTACTTTCTTGTATGTAGTAGCTATGATTATTCCACCTGTGGCTTGTATTGTTCGTGATGTTTATATATTATTTTGTTTCGAGTGTATGTATAGTGTAAATTATGTAACTGTCAAAGAGAAGAGATTCGAACTTCTAACTTCTTAAAAAGGAGACGATGTTGTAATTGAAATTTGACATTTTGGAGTAAGAAATTCGAACCTCTATTCTTTTAATAATCTTGATTTGGATAGTATAGTCGATGAATTTGACTCATGATCTGTAATGATAGCCATTTAACAA ATGGCGAAGCGATTGTCGATCGGAAGCAGAGTGCGGAACAAGCTAGCAGATATTACGAATTCCAAGACAATGAGAGCTCATATGGAAGATGAAAGGTCTTCGGAAGCTTGGCGGTCAAATCAAGACGTTGTCGATCAGCTGGTCGAGGAAAATATGGCTCTGATGAAACTTGTCATGGAGAAGAATGAAATTATTGATCTGACTGAAGCCGAGCTAAACAAACTTCGTGAATGCATTCAGAAACTGCAGCTTCAGAATTGGCAGCTTGCTCAATCAAACAGTCATTTTTTAGCAGAAATCAATTTAGGGAGAGAGAGAATAAAATCACTGGGGCATGAGCTTGAATGCAAGGAGGCCTTGCTAAAAGCAACGCGTTTGAATACTGTGGGGAAAGCAGGAATGAATAATGGAAATTCTGGATGGCAGGAAGAAGAGAAGCCAACAGAGCAATTTCCACTTGCGGTTAAAACTGACACCAAAGCTTGCAGTGGAAACAGAAAGCCCTCCGGACGAGCTAGAAATCAATCTATGAGCCCTTCAGCTTCATACTCAAAGTGTGCGATGAAGAGAAAGGATGAAAACAAAAGGCATTGTGTAAGAGCACAATCTGGTAGATTTAGATATCAAATGAGACACCATGAAGAGAACTCGTTTGAGATAGAAGAAGACATGAAATTTACTGCTACTGGAGAAGATGAAGAAGAAAGGAAGAACAACAATGTCAATTCACCATCATCATCTTCAGCTCTGCAAAGATCTTATATTGGAAGACCATTGCACAGAGCAGCTGAAAAGATTCAATCCTACAAAGAAGCTCGTCACAACGCTAAAATCAGACGACAAGAATGA MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLTEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRERIKSLGHELECKEALLKATRLNTVGKAGMNNGNSGWQEEEKPTEQFPLAVKTDTKACSGNRKPSGRARNQSMSPSASYSKCAMKRKDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRQE
BLAST of Cp4.1LG02g12680 vs. Swiss-Prot
Match: SGO1_MAIZE (Shugoshin-1 OS=Zea mays GN=SGO1 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11 Identity = 68/198 (34.34%), Postives = 96/198 (48.48%), Query Frame = 1
BLAST of Cp4.1LG02g12680 vs. TrEMBL
Match: A0A0A0LSM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097670 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 3.9e-83 Identity = 188/285 (65.96%), Postives = 220/285 (77.19%), Query Frame = 1
BLAST of Cp4.1LG02g12680 vs. TrEMBL
Match: A0A061GYW9_THECC (Shugoshin C terminus, putative OS=Theobroma cacao GN=TCM_042157 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.6e-47 Identity = 132/300 (44.00%), Postives = 181/300 (60.33%), Query Frame = 1
BLAST of Cp4.1LG02g12680 vs. TrEMBL
Match: V4SFX3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028947mg PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.0e-46 Identity = 135/297 (45.45%), Postives = 182/297 (61.28%), Query Frame = 1
BLAST of Cp4.1LG02g12680 vs. TrEMBL
Match: B9SCJ5_RICCO (Shugoshin-1, putative OS=Ricinus communis GN=RCOM_0474400 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 4.0e-43 Identity = 135/299 (45.15%), Postives = 183/299 (61.20%), Query Frame = 1
BLAST of Cp4.1LG02g12680 vs. TrEMBL
Match: U5GGX7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s22560g PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.7e-41 Identity = 134/300 (44.67%), Postives = 174/300 (58.00%), Query Frame = 1
BLAST of Cp4.1LG02g12680 vs. TAIR10
Match: AT5G04320.2 (AT5G04320.2 Shugoshin C terminus) HSP 1 Score: 77.0 bits (188), Expect = 2.0e-14 Identity = 41/97 (42.27%), Postives = 64/97 (65.98%), Query Frame = 1
BLAST of Cp4.1LG02g12680 vs. TAIR10
Match: AT3G10440.1 (AT3G10440.1 Shugoshin C terminus) HSP 1 Score: 66.6 bits (161), Expect = 2.8e-11 Identity = 64/202 (31.68%), Postives = 95/202 (47.03%), Query Frame = 1
BLAST of Cp4.1LG02g12680 vs. NCBI nr
Match: gi|449459158|ref|XP_004147313.1| (PREDICTED: uncharacterized protein LOC101205365 [Cucumis sativus]) HSP 1 Score: 316.2 bits (809), Expect = 5.7e-83 Identity = 188/285 (65.96%), Postives = 220/285 (77.19%), Query Frame = 1
BLAST of Cp4.1LG02g12680 vs. NCBI nr
Match: gi|659072061|ref|XP_008463238.1| (PREDICTED: uncharacterized protein LOC103501433 isoform X2 [Cucumis melo]) HSP 1 Score: 310.1 bits (793), Expect = 4.1e-81 Identity = 183/285 (64.21%), Postives = 220/285 (77.19%), Query Frame = 1
BLAST of Cp4.1LG02g12680 vs. NCBI nr
Match: gi|659072059|ref|XP_008463230.1| (PREDICTED: uncharacterized protein LOC103501433 isoform X1 [Cucumis melo]) HSP 1 Score: 307.8 bits (787), Expect = 2.0e-80 Identity = 184/286 (64.34%), Postives = 221/286 (77.27%), Query Frame = 1
BLAST of Cp4.1LG02g12680 vs. NCBI nr
Match: gi|659072063|ref|XP_008463245.1| (PREDICTED: uncharacterized protein LOC103501433 isoform X3 [Cucumis melo]) HSP 1 Score: 283.5 bits (724), Expect = 4.1e-73 Identity = 174/285 (61.05%), Postives = 211/285 (74.04%), Query Frame = 1
BLAST of Cp4.1LG02g12680 vs. NCBI nr
Match: gi|1009115938|ref|XP_015874505.1| (PREDICTED: shugoshin-1-like [Ziziphus jujuba]) HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48 Identity = 139/302 (46.03%), Postives = 187/302 (61.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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