Cla005078 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCTACCAACCTCTTTCTTTTTCTACTTGAAGTCTCCATCAAAACATAAACTACAAATAGAATTTCCTGAACGTTTCAACAGTAAAATAATCGACCTGAGTGAAGCTGAGTTGCAAAACCTTAGGGCAAGCATTCAGAAACTGCAGCTTCAGAATTGGCATCTTGCTCAATCAAACAGTCGCTTTTTAGCAGTAAGATTATATGCATATTCTAATTATTTCTCTGATGAGTGTTCATCTGACACCTCTCATATTTTAACTATAACCGTACACTGTTTTCCTCTTGCAGGAAATCAATTTGGGGAGAAAGAGAGTAAGTTTCAAAATGTCTTGAATTGATTTCTTGGTGCATTTATTTATTGTGATGCTCAATAATTTGTTCCTGATGTGTTCTAGATAAAATCACTGGAGCATGAGATTGAATGCAAAGAGGCTTTGCTAAGGGCAAAGTGTTTGAATGTAAAGGTAATTATCTTCGGACTTTTAGCGGGGACATTTATTTTACTTAGTTCCCAGTCTCTGTCATCTAACGATAAAGATTTGGAAGAATCATAATTCAATGTTTAGAACTATATAGATACTGTAGATGTCGCGTGGCAGCAATCATAAATTTGTAATTCAGGAAATATGTGACCTGCGAAACATGGAAGAATCTTAGCACCGTTGTGACACTTGCCACCATACTTTCGATGCTTAAGTCAAGGTTGTAACAAGAATCTTAAGGATGAGAATGAATTTACTTTATCTAAAGTTATAATCATGTATACAGAGGTTGTTTAACCTAGTGTTTTCCCTCTCCTCTTTTGGATTTGGACTATGGTGTGCAGATTGTCCACTCTTGGGCCGAAGGGTCACCCTCATCCTCATCCTATTCGAGGCCAGGGTAACTCTTCATGGGCCTCAACTCGTGGTTCGCCTGGCCCAAAATCTATTTAAGCCTTGGGTCGGGTATTTCGATGTCGAGTTTTGCTTTTGGTCTTATTCGAGCCCAATTTTTCTTGTTTATGTCTAAACCTTCTCGAATGGAAATAAATAAGTTGTGACAATGCATTCTTATAGATTGGTAGAAAAGATTCTCATTAAACCTAATTATTAAAGGATGAGACATTCTTAGCAGCTATATGTAGAATAACAACACTTCATTACAAACAAGAATCAACTAGCCTTTGGGGGGCAGATCAAAGTTTTTTAAACCCAAATTTTGGATAAGCTAGTTTTATGAAAAATACTGAACCAATTCTCATTGATGAACAATGGCTATATATTCTGACAGGGTAAGACAGAGATGAATAATAGAAATTCTGAGTGGCAGGTAATTTGGTGATTTCCTTTTTTCCAGGTATCTGATTTATTATTCTGCTCAGTCCTCACACTATGCTCACAAATATTTTACATAACTTCACCTATTTTCTTGGCTTCAGGAAGAAGAGAAGCTTACAGGGCAACCTTCACTTGCAGTTGTTAATACTGACACCAAATCTTGCAATGGAAATAGAAAGCCTCCAGGAAGAACTAGAAGTCACTGTAGGTTCATGAATTGA ATGTTGCTACCAACCTCTTTCTTTTTCTACTTGAAGTCTCCATCAAAACATAAACTACAAATAGAATTTCCTGAACGTTTCAACAGTAAAATAATCGACCTGAGTGAAGCTGAGTTGCAAAACCTTAGGGCAAGCATTCAGAAACTGCAGCTTCAGAATTGGCATCTTGCTCAATCAAACAGTCGCTTTTTAGCAGAAATCAATTTGGGGAGAAAGAGAATAAAATCACTGGAGCATGAGATTGAATGCAAAGAGGCTTTGCTAAGGGCAAAGTGTTTGAATGTAAAGGGTAAGACAGAGATGAATAATAGAAATTCTGAGTGGCAGGAAGAAGAGAAGCTTACAGGGCAACCTTCACTTGCAGTTGTTAATACTGACACCAAATCTTGCAATGGAAATAGAAAGCCTCCAGGAAGAACTAGAAGTCACTGTAGGTTCATGAATTGA ATGTTGCTACCAACCTCTTTCTTTTTCTACTTGAAGTCTCCATCAAAACATAAACTACAAATAGAATTTCCTGAACGTTTCAACAGTAAAATAATCGACCTGAGTGAAGCTGAGTTGCAAAACCTTAGGGCAAGCATTCAGAAACTGCAGCTTCAGAATTGGCATCTTGCTCAATCAAACAGTCGCTTTTTAGCAGAAATCAATTTGGGGAGAAAGAGAATAAAATCACTGGAGCATGAGATTGAATGCAAAGAGGCTTTGCTAAGGGCAAAGTGTTTGAATGTAAAGGGTAAGACAGAGATGAATAATAGAAATTCTGAGTGGCAGGAAGAAGAGAAGCTTACAGGGCAACCTTCACTTGCAGTTGTTAATACTGACACCAAATCTTGCAATGGAAATAGAAAGCCTCCAGGAAGAACTAGAAGTCACTGTAGGTTCATGAATTGA MLLPTSFFFYLKSPSKHKLQIEFPERFNSKIIDLSEAELQNLRASIQKLQLQNWHLAQSNSRFLAEINLGRKRIKSLEHEIECKEALLRAKCLNVKGKTEMNNRNSEWQEEEKLTGQPSLAVVNTDTKSCNGNRKPPGRTRSHCRFMN
BLAST of Cla005078 vs. Swiss-Prot
Match: SGO1_MAIZE (Shugoshin-1 OS=Zea mays GN=SGO1 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.7e-12 Identity = 39/95 (41.05%), Postives = 53/95 (55.79%), Query Frame = 1
BLAST of Cla005078 vs. TrEMBL
Match: A0A0A0LSM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097670 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.3e-48 Identity = 101/114 (88.60%), Postives = 106/114 (92.98%), Query Frame = 1
BLAST of Cla005078 vs. TrEMBL
Match: A0A0D2QDM3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G111300 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.1e-23 Identity = 67/141 (47.52%), Postives = 92/141 (65.25%), Query Frame = 1
BLAST of Cla005078 vs. TrEMBL
Match: A0A0B0MSA1_GOSAR (Shugoshin-1 OS=Gossypium arboreum GN=F383_24385 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.1e-23 Identity = 63/140 (45.00%), Postives = 91/140 (65.00%), Query Frame = 1
BLAST of Cla005078 vs. TrEMBL
Match: V4SFX3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028947mg PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 5.4e-23 Identity = 59/114 (51.75%), Postives = 84/114 (73.68%), Query Frame = 1
BLAST of Cla005078 vs. TrEMBL
Match: U5GGX7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s22560g PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.9e-21 Identity = 54/114 (47.37%), Postives = 82/114 (71.93%), Query Frame = 1
BLAST of Cla005078 vs. NCBI nr
Match: gi|659072061|ref|XP_008463238.1| (PREDICTED: uncharacterized protein LOC103501433 isoform X2 [Cucumis melo]) HSP 1 Score: 207.6 bits (527), Expect = 1.5e-50 Identity = 101/114 (88.60%), Postives = 109/114 (95.61%), Query Frame = 1
BLAST of Cla005078 vs. NCBI nr
Match: gi|659072059|ref|XP_008463230.1| (PREDICTED: uncharacterized protein LOC103501433 isoform X1 [Cucumis melo]) HSP 1 Score: 203.0 bits (515), Expect = 3.7e-49 Identity = 101/115 (87.83%), Postives = 109/115 (94.78%), Query Frame = 1
BLAST of Cla005078 vs. NCBI nr
Match: gi|449459158|ref|XP_004147313.1| (PREDICTED: uncharacterized protein LOC101205365 [Cucumis sativus]) HSP 1 Score: 200.7 bits (509), Expect = 1.8e-48 Identity = 101/114 (88.60%), Postives = 106/114 (92.98%), Query Frame = 1
BLAST of Cla005078 vs. NCBI nr
Match: gi|659072063|ref|XP_008463245.1| (PREDICTED: uncharacterized protein LOC103501433 isoform X3 [Cucumis melo]) HSP 1 Score: 171.8 bits (434), Expect = 9.0e-40 Identity = 89/114 (78.07%), Postives = 96/114 (84.21%), Query Frame = 1
BLAST of Cla005078 vs. NCBI nr
Match: gi|1009115938|ref|XP_015874505.1| (PREDICTED: shugoshin-1-like [Ziziphus jujuba]) HSP 1 Score: 119.4 bits (298), Expect = 5.3e-24 Identity = 61/114 (53.51%), Postives = 86/114 (75.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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