ClCG03G002610 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CATCAACAAAAACCTCAATTTTCTCTCCTCATAAACTCTAAAAATCCCAATTTGTTTCCAAAATTCGTTGATTTGGAATGGCGAAGACATCGTCATTTGGAAGCAGAATGAGAAACAAACTTGCAGATATTACCAATTCCAAAACAATGAGAGCTCATATAGAAGACGAAAAATCTTTTCAAGCTTTACAGCCAAAGAAGAGCGTTATCGATCAGCTAGTGAATGTGAGGATCTGATCTCCTCTTGCATCTTCCTTCAAATTTTCAATTTTCTTGTTTCTGAGTTGGGTTTGATTTTAATTTGTGGAACAGGAAAATATGGCTCTTATGAAACTTATCCTGGAGAGGAAGTATCCTTCTGTTTCATATTTTGTAGTTCTGAATGAATTTGCTTTATAAGGTTACCTCTGTCACAAGCTCCGAATTTCATAGGTTCCAAGAATTTTGGGTTAAATTTTGAGTTTGATCTTTGAAGTCTTTAATTTTCCTTCCTAGAGTGTTTGATTGAAATTCTAAGAAAGTTCTTGCCTTTAGCATGTTTGGACTGTCTGCCCTTATTTTATCCAACTTCGTCTACTGTTAGTGTCAAATTATCACTCATTAGTCAAATTACTATGTCACTTCAATAATAGCAATGTATGGCACAAAGGGAGTTGGCTAACTTGATACATTGAGGGCTGCTTGGCCATATAGTTGTTAAGATGTATTTTCCCATCAATCCCATTGATCTTTTTACCCATTGCGAAACCACCCTATTATATCTGACTAGTCTCTACTCTTCAGTGTCCTGTCATTTTGAATTATCACTTTTTAGTCCAATGAACTTGTCGAGTCCTAACCATTTAGATAGCAGTTAGTAACATCCTATTAAATTTATAATTGGAAGTTCAAAGATATAATTGATTTTTTTCTATCATGGACTAGTTTGTTAAAATGGCTACAAGTGATGACTATCTAGAAGCTTCTTGAATTTTCTATATATCTCTCTTATATATGTCATATTGATTCTTCTTTATTTACCTTGAATACTGTAAATAGATATCTAAAAGAGGCTCTAGAAATATTTTAGCCTTTGTTTATGCTCCAAAAAGAATTCCTTTAGATAAGTATAAACTTAGGATATTTTCGTTTTAAGAAGGGCGTAGAATCCATCCCTTTACTTTCTTAGTGGAAGTTTCTTTATTCTAGTGTTTGTCTCTTTCCTTTTCTATTAATCTTCAAAAAAAAAATAAGTTATATTAGAACCAAGCTAGTATAACTTGCTATGACGGAGTTTTTAAAGATTGTGTGCAATCTAGGATTGTGAAATTTGTTGTTTAGAACACAATTTATTTGTGAAAAGGATTTTTCTAGACCCTTCTTGTCGAAGTCTATCCTTATCTCAAAAATAATCATGAAGTTTATCCTTATCTTTAACTAGAGCCTAGTTTAGATATCTATTTACTATATTCAATATAAATCTAGAAAAGTTAATGTGGCATATTGAAAATAGAAAATTTATTTTGCTCGGGCCTCAAGGATTTCATACCTATAAAATAGGAAATGAGTATGTCAGTCAAGTAAGATAAAGTGAGTAATGTGCGTGAAGGAGTATTAAGAGAGTGAAAGAGTCATCTTTGTAATTTCTTAATAAAAGTTGTTTTTCCAAGGGTTTATCTCTTCCTTTTTTTCCTGGCTTTTTCAACATAAACAAGAATGAAAATTTAAGCCCTATCTAATAATTATTTTAACTAAGAATTCAAATGTTAAATAAGAAAAGTGAAAACAAGCCTACCAAAATGTATAGGCTTTTAGGACCTAAACTTAGTTTAGCCTAAATGTTGCTACCAACCTCTTTCTTTTTCTACTTGAAGTCTCCATCAAAACATAAACTACAAATAGAATTTCCTGAACGTTTCAACAGTAAAATAATCGACCTGAGTGAAGCTGAGTTGCAAAACCTTAGGGCAAGCATTCAGAAACTGCAGCTTCAGAATTGGCATCTTGCTCAATCAAACAGTCGCTTTTTAGCAGTAAGATTATATGCATATTCTAATTATTTCTCTGATGAGTGTTCATCTGACACCTCTCATATTTTAACTATAACCGTACACTGTTTTCCTCTTGCAGGAAATCAATTTGGGGAGAAAGAGAGTAAGTTTCAAAATGTCTTGAATTGATTTCTTGGTGCATTTATTTATTGTGATGCTCAATAATTTGTTCCTGATGTGTTCTAGATAAAATCACTGGAGCATGAGATTGAATGCAAAGAGGCTTTGCTAAGGGCAAAGTGTTTGAATGTAAAGGTAATTATCTTCGGACTTTTAGCGGGGACATTTATTTTACTTAGTTCCCAGTCTCTGTCATCTAACGATAAAGATTTGGAAGAATCATAATTCAATGTTTAGAACTATATAGATACTGTAGATGTCGCGTGGCAGCAATCATAAATTTGTAATTCAGGAAATATGTGACCTGCGAAACATGGAAGAATCTTAGCACCGTTGTGACACTTGCCACCATACTTTCGATGCTTAAGTCAAGGTTGTAACAAGAATCTTAAGGATGAGAATGAATTTACTTTATCTAAAGTTATAATCATGTATACAGAGGTTGTTTAACCTAGTGTTTTCCCTCTCCTCTTTTGGATTTGGACTATGGTGTGCAGATTGTCCACTCTTGGGCCGAAGGGTCACCCTCATCCTCATCCTATTCGAGGCCAGGGTAACTCTTCATGGGCCTCAACTCGTGGTTCGCCTGGCCCAAAATCTATTTAAGCCTTGGGTCGGGTATTTCGATGTCGAGTTTTGCTTTTGGTCTTATTCGAGCCCAATTTTTCTTGTTTATGTCTAAACCTTCTCGAATGGAAATAAATAAGTTGTGACAATGCATTCTTATAGATTGGTAGAAAAGATTCTCATTAAACCTAATTATTAAAGGATGAGACATTCTTAGCAGCTATATGTAGAATAACAACACTTCATTACAAACAAGAATCAACTAGCCTTTGGGGGGCAGATCAAAGTTTTTTAAACCCAAATTTTGGATAAGCTAGTTTTATGAAAAATACTGAACCAATTCTCATTGATGAACAATGGCTATATATTCTGACAGGGTAAGACAGAGATGAATAATAGAAATTCTGAGTGGCAGGTAATTTGGTGATTTCCTTTTTTCCAGGTATCTGATTTATTATTCTGCTCAGTCCTCACACTATGCTCACAAATATTTTACATAACTTCACCTATTTTCTTGGCTTCAGGAAGAAGAGAAGCTTACAGGGCAACCTTCACTTGCAGTTGTTAATACTGACACCAAATCTTGCAATGGAAATAGAAAGCCTCCAGGAAGAACTAGAAGTCACTGTAGGTTCATGAATTGATATCATGATATGAACATAAGCCAAAAAAAAAAAAAGATTCCATTTTACTGTCAATTTATAATAGACATCCTTAAAATGGTGTGAGAATAAAGTAAAGGGTGTAATGATTACCAGTACTTGAGTAAAAAGTTCTCCACAAGAAATTATTTTGATCTTGAGTTCTACTCTTTTGATAAAGTGCTTCTCCATGAATCTTTTCTCATAAAACACATTAGAGTATTTTTATATTACTCTCCCAAATATATGTGGTTTTGAGAGCAAGAGCAAGCCAAAAGGGCTCTCAAACCCGAGGATTTTACACATTTATTGACAGTGATGAGATATTGGCACTATATCCCTTTCCCTGTTTATTTTTCTTCTTATCTTACTTATTGTTGGTTGAAAACTAATGGCACTTGGACAATGCAGCTATGGGCCCTTCAACTTCATGCTCAATAGTGGCTGATAAAGAGAGAGTTGAGAACAAACTCATTCTTACCTAGCGATATCTATGCATGGTTCGTTTGATAAACATTTAGGCCCGTTTGGTTAAGTCTTTAAAATTGAAATTTAGAGGTAGAAAATGGTGTTTACAGGCTTAAATTCAAAATTTAAAAACTAAAAACTAGGGCACTATTTGGTAACTATTTCGTTTTTTGTTTTTGGTTTTAGAATATTAAGTCTCTCATACAATATTTTGTATCTTTCTTGAATTCTTAGACAAATTATTAAACAATAATAATAATTTAAAAATCAAATGATTATCAAACGGGATCTTGGTTTTGAATTATAAATCTTTTTGAAATACAAGGCAAGTTTTTAAGAACTTGTTTTGGTCTTAAGAATATGACAATGAATTCAAATGTGTTCGTTAAGAAATGGTGAGAAAACAAGTTAATTTTTCAAAAATCAATTATTTGGTTTACATATTTGTCTGTTTCTAGGCATTGTGTAAGAAGGCACTCAAGTAGATTTAGACATCAAGTGAGAGAGCTTGAAGAGAAGTTATTTGAAATAGAAGACATAAAACTTGTTGCTAGTGAAGAAGAAGAAGAAAGGAAGAACAATATTAGCTCATCATCCTCCCTCAGATTTGAAGAAGCTTCAGCTCTACAAACAACTTCAATTAAAAGGCCATTATTCAGAGCAGCTCAAAAGATTCAATCTTATAAACAATCTCATCATAATATTAAAATCAGAAGACAAGAATGA CATCAACAAAAACCTCAATTTTCTCTCCTCATAAACTCTAAAAATCCCAATTTGTTTCCAAAATTCGTTGATTTGGAATGGCGAAGACATCGTCATTTGGAAGCAGAATGAGAAACAAACTTGCAGATATTACCAATTCCAAAACAATGAGAGCTCATATAGAAGACGAAAAATCTTTTCAAGCTTTACAGCCAAAGAAGAGCGTTATCGATCAGCTAGTGAATGAAAATATGGCTCTTATGAAACTTATCCTGGAGAGGAATAAAATAATCGACCTGAGTGAAGCTGAGTTGCAAAACCTTAGGGCAAGCATTCAGAAACTGCAGCTTCAGAATTGGCATCTTGCTCAATCAAACAGTCGCTTTTTAGCAGAAATCAATTTGGGGAGAAAGAGAATAAAATCACTGGAGCATGAGATTGAATGCAAAGAGGCTTTGCTAAGGGCAAAGTGTTTGAATGTAAAGGGTAAGACAGAGATGAATAATAGAAATTCTGAGTGGCAGGAAGAAGAGAAGCTTACAGGGCAACCTTCACTTGCAGTTGTTAATACTGACACCAAATCTTGCAATGGAAATAGAAAGCCTCCAGGAAGAACTAGAAGTCACTTGAGAGAGCTTGAAGAGAAGTTATTTGAAATAGAAGACATAAAACTTGTTGCTAGTGAAGAAGAAGAAGAAAGGAAGAACAATATTAGCTCATCATCCTCCCTCAGATTTGAAGAAGCTTCAGCTCTACAAACAACTTCAATTAAAAGGCCATTATTCAGAGCAGCTCAAAAGATTCAATCTTATAAACAATCTCATCATAATATTAAAATCAGAAGACAAGAATGA ATGGCGAAGACATCGTCATTTGGAAGCAGAATGAGAAACAAACTTGCAGATATTACCAATTCCAAAACAATGAGAGCTCATATAGAAGACGAAAAATCTTTTCAAGCTTTACAGCCAAAGAAGAGCGTTATCGATCAGCTAGTGAATGAAAATATGGCTCTTATGAAACTTATCCTGGAGAGGAATAAAATAATCGACCTGAGTGAAGCTGAGTTGCAAAACCTTAGGGCAAGCATTCAGAAACTGCAGCTTCAGAATTGGCATCTTGCTCAATCAAACAGTCGCTTTTTAGCAGAAATCAATTTGGGGAGAAAGAGAATAAAATCACTGGAGCATGAGATTGAATGCAAAGAGGCTTTGCTAAGGGCAAAGTGTTTGAATGTAAAGGGTAAGACAGAGATGAATAATAGAAATTCTGAGTGGCAGGAAGAAGAGAAGCTTACAGGGCAACCTTCACTTGCAGTTGTTAATACTGACACCAAATCTTGCAATGGAAATAGAAAGCCTCCAGGAAGAACTAGAAGTCACTTGAGAGAGCTTGAAGAGAAGTTATTTGAAATAGAAGACATAAAACTTGTTGCTAGTGAAGAAGAAGAAGAAAGGAAGAACAATATTAGCTCATCATCCTCCCTCAGATTTGAAGAAGCTTCAGCTCTACAAACAACTTCAATTAAAAGGCCATTATTCAGAGCAGCTCAAAAGATTCAATCTTATAAACAATCTCATCATAATATTAAAATCAGAAGACAAGAATGA MAKTSSFGSRMRNKLADITNSKTMRAHIEDEKSFQALQPKKSVIDQLVNENMALMKLILERNKIIDLSEAELQNLRASIQKLQLQNWHLAQSNSRFLAEINLGRKRIKSLEHEIECKEALLRAKCLNVKGKTEMNNRNSEWQEEEKLTGQPSLAVVNTDTKSCNGNRKPPGRTRSHLRELEEKLFEIEDIKLVASEEEEERKNNISSSSSLRFEEASALQTTSIKRPLFRAAQKIQSYKQSHHNIKIRRQE
BLAST of ClCG03G002610 vs. Swiss-Prot
Match: SGO1_MAIZE (Shugoshin-1 OS=Zea mays GN=SGO1 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.8e-16 Identity = 53/142 (37.32%), Postives = 72/142 (50.70%), Query Frame = 1
HSP 2 Score: 30.0 bits (66), Expect = 4.5e+01 Identity = 46/204 (22.55%), Postives = 76/204 (37.25%), Query Frame = 1
BLAST of ClCG03G002610 vs. TrEMBL
Match: A0A0A0LSM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097670 PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 1.1e-89 Identity = 187/279 (67.03%), Postives = 208/279 (74.55%), Query Frame = 1
BLAST of ClCG03G002610 vs. TrEMBL
Match: V4SFX3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028947mg PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.9e-45 Identity = 124/295 (42.03%), Postives = 172/295 (58.31%), Query Frame = 1
BLAST of ClCG03G002610 vs. TrEMBL
Match: W9S975_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020634 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.9e-44 Identity = 115/263 (43.73%), Postives = 154/263 (58.56%), Query Frame = 1
BLAST of ClCG03G002610 vs. TrEMBL
Match: A0A061GYW9_THECC (Shugoshin C terminus, putative OS=Theobroma cacao GN=TCM_042157 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 2.1e-43 Identity = 120/297 (40.40%), Postives = 165/297 (55.56%), Query Frame = 1
BLAST of ClCG03G002610 vs. TrEMBL
Match: A0A022RB25_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011326mg PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 3.1e-39 Identity = 111/283 (39.22%), Postives = 157/283 (55.48%), Query Frame = 1
BLAST of ClCG03G002610 vs. TAIR10
Match: AT5G04320.2 (AT5G04320.2 Shugoshin C terminus) HSP 1 Score: 84.0 bits (206), Expect = 1.5e-16 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = 1
HSP 2 Score: 31.6 bits (70), Expect = 8.7e-01 Identity = 21/73 (28.77%), Postives = 35/73 (47.95%), Query Frame = 1
BLAST of ClCG03G002610 vs. TAIR10
Match: AT3G10440.1 (AT3G10440.1 Shugoshin C terminus) HSP 1 Score: 77.4 bits (189), Expect = 1.4e-14 Identity = 47/127 (37.01%), Postives = 71/127 (55.91%), Query Frame = 1
HSP 2 Score: 31.6 bits (70), Expect = 8.7e-01 Identity = 31/119 (26.05%), Postives = 49/119 (41.18%), Query Frame = 1
BLAST of ClCG03G002610 vs. NCBI nr
Match: gi|449459158|ref|XP_004147313.1| (PREDICTED: uncharacterized protein LOC101205365 [Cucumis sativus]) HSP 1 Score: 337.8 bits (865), Expect = 1.6e-89 Identity = 187/279 (67.03%), Postives = 208/279 (74.55%), Query Frame = 1
BLAST of ClCG03G002610 vs. NCBI nr
Match: gi|659072061|ref|XP_008463238.1| (PREDICTED: uncharacterized protein LOC103501433 isoform X2 [Cucumis melo]) HSP 1 Score: 329.3 bits (843), Expect = 5.7e-87 Identity = 181/279 (64.87%), Postives = 209/279 (74.91%), Query Frame = 1
BLAST of ClCG03G002610 vs. NCBI nr
Match: gi|659072059|ref|XP_008463230.1| (PREDICTED: uncharacterized protein LOC103501433 isoform X1 [Cucumis melo]) HSP 1 Score: 324.7 bits (831), Expect = 1.4e-85 Identity = 181/280 (64.64%), Postives = 209/280 (74.64%), Query Frame = 1
BLAST of ClCG03G002610 vs. NCBI nr
Match: gi|659072063|ref|XP_008463245.1| (PREDICTED: uncharacterized protein LOC103501433 isoform X3 [Cucumis melo]) HSP 1 Score: 297.7 bits (761), Expect = 1.9e-77 Identity = 174/272 (63.97%), Postives = 201/272 (73.90%), Query Frame = 1
BLAST of ClCG03G002610 vs. NCBI nr
Match: gi|1009115938|ref|XP_015874505.1| (PREDICTED: shugoshin-1-like [Ziziphus jujuba]) HSP 1 Score: 208.0 bits (528), Expect = 1.9e-50 Identity = 129/302 (42.72%), Postives = 179/302 (59.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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