Carg12298 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12298
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	shugoshin-1-like
Location	Cucurbita_argyrosperma_scaffold_074 : 146610 .. 149456 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTCCTCTGTTTTCTCTTCCATAAAAACCGCAAATTCCTCTCATCATAGACACCAGAAATCCCCAATTATTGGCGAAATTCCTTCCTTAGGGCATTGTGTTACGATTCGCTGATTTGAAATGGCGAAGCGATTGTCGATTGGAAGCAGAGTGCGGAACAAGCTAGCAGATATTACGAATTCCAAGACAATGAGAGCTCATATGGAAGATGAAAGGTCTTCGGAAGCTTGGCGGTCAAATCAAGACGTTGTCGATCAGCTGGTGGAGGTATGCATCAATCTGGTCTCCCTTTGCCTGTTCTTCTTTAATCTGACATATTTGTTTGATTGGATGTAATTTATGGATCAGGAAAATATGGCTCTGATGAAACTTGTCATGGAGAAGAAGTATCCTTCTGGATTTGCCTTTTCTTCCTCTAAATTCTCTATTATCAATCTCATTAGCATATCATGACAATACTATCGTAGTTCATATCTTTTGAAAACAGAACTTTCAAGGAAAACAAATGATTCCTTGACACTTGAACAGTGAGATTATTGATCTGAGTGAAGCCGAGCTAAACAAACTTCGGGAATGCATTCAGAAACTGCAGCTTCAGAATTGGCAGCTTGCTCAATCAAACAGTCATTTTTTAGCAGTATGATCATTTATAATTCAGAAACATTTATGATTATCCCTCTCCTATTTTTCATTACCCTTGACAACTCTGAGACTCTAATCAACTGTACATCGATTTCCTCTTACAGGAAATCAATTTAGGGAGAGATAGAGTAAGTTCCCAACAATCTTGAATTTATTTTTTTGCTGCATTTGTTTCAATCTCATTTATGCTCAATAAATTGGTCCTGATGTGTTTCAGATAAAATCACTGGGGCATGAGCTTGAATGCAAGGAGGCCTTGCTAAAAGCAACGCGTTTGAATACCGTGGTAGTAACTTTAGACACTTTTTCTTCCGGCAAAGAATAGTAGGGATATCTATTTTGTCTGGCTCTGGAATTGTTCCAGTCATTTATTAATGACAGAGATAAGTTTGAATTGGAACTAAAATTGTAATTTAACCAAAAATATGTAATTAGGAGTAGCTTCGATCAAGCTATCTTGTGAAGTGATTCGAATCACGAGTTTAGAAATGAGTTTTCTTTACTTTTGATATCTTGATCATTAAGAAAATTCGTTCCAAAACTTTCCCTCGAGTTGATTCATTACCGTTTTTTGGGATTTTTGAATAATTTAGATATAAAGATCTTACTCTTTAACACAGTTTTTAGATCAAATCCTAAGAGTTTCAACCCTCACACAAGTTCCTTACAAACTAGACCCAAATTTGGGGAAAACTGAAGCTTTTCTTATCAAGATTTAGATTAGCTAGGTTAATTTTCTTCAATAGGCAATGAAAAAGTCTTGTATTTTAACAAGAAACTGCTGTATATTCCGACAGGGGAAAGCAGGAATGAATAATGGAAATTATGAATGGCAGGTAATTGGTAATTTCCTTTTCTTTTTCTTTCAGGCATCTCTGCTTTTCTATTCTTTTCATGCCTCAAACTTCACTTAGAACTGTCTTTTTCACCCATTCTTTCCTGGCTTCAGGAAGAAGAGAAGCCAACAGAGCAATTTCCACTTGCGGTTAAAATTGACACCAAAGCTTGTAGTGGAAACAGAAAGCCCTCCGGACGAGCTAGAAATCAATGTATGTTCATGAATTGATGAATATGAACAAAAGCCTAAAAATGTTCCCATTTTACTGCCAATTTATAGCAACTATCCTCACCGTTATGTTCAAATTGTGAGTTGCAGTTAAAAGGGTTTCATAAGAAATTATTCTGATGCTTAGCTCTACTCTTTTGAAAATGCTTTTAATAAAGTTATTCTCTAGGACTGTTTCCTCATAAATCACTTCTAAATCTTTTTCAAGAACATGTTACTCCCAAATATTACGATGGTTTTGAGACCATGCCAAGAGGACTCCAACATTTGGAATTACGATTCTCCATGATGGTATGACATTGTCCATTTTTAGCATAAACTCTCATGGGTTTGTTTTGGGCTTCCCAGCCTCGTACCAATGGAGATGTATTCCTTACTTATAAATCCATGATCATTCCCTAAATTAGCAGCTAACGTAGACTCCCTCCACACAATCCTCAACGTCCTAGACCTGAAAACTTTATTCTTATTGTCTGGTTGAAAAGTAACGACTCTTAAACAACTGCAGCTATGAGCCCTTCAGCTTCATACTCAAAGTATGCGACGAAGAGAGATGATGAAAACAAAAGGTACTTAGCAATATTTGAACTGGTATTCTTTCAACTTTAGTTACTGCTTTTTTTTACATATTTTACTGTTTACAGGCATTGTGTAAGAGCACAATCTGGTAGATTTAGATATCAAATGAGACACCATGAAGAGAACTCGTTTGAAATAGAAGAAGACATGAAATTTACTGCTACTGGAGAAGATGAAGAAGAAAGGAAGAACAACAATGTCAATTCACCATCATCATCTTCAGCTCTGCAAAGATCTTATATTGGAAGACCATTGCACAGAGCAGCTGAAAAGATTCAATCCTACAAAGAAGCTCGTCACAACGCTAAAATCAGACGACATGATTGACAAGTGAGATCAGTATACTGTTTCAGCTAGCAGTTTAAATTTTACTTTCTTGTATGTAGCTATGATTATTCCACCTGTGGCTTGTATTGTTCTTGATGTATAAATATTATTTTGTTTCGGAGTGCATGTATAGTGTAAATTATGTAACTGTCAAGAGAAGATTCGAACTTCTAACTTATTGAAAAGGAGACGATGCTGTAATTGAAATTTGACATTTTGAAGTAAGAAATTC

mRNA sequence

AATTTCCTCTGTTTTCTCTTCCATAAAAACCGCAAATTCCTCTCATCATAGACACCAGAAATCCCCAATTATTGGCGAAATTCCTTCCTTAGGGCATTGTGTTACGATTCGCTGATTTGAAATGGCGAAGCGATTGTCGATTGGAAGCAGAGTGCGGAACAAGCTAGCAGATATTACGAATTCCAAGACAATGAGAGCTCATATGGAAGATGAAAGGTCTTCGGAAGCTTGGCGGTCAAATCAAGACGTTGTCGATCAGCTGGTGGAGGAAAATATGGCTCTGATGAAACTTGTCATGGAGAAGAATGAGATTATTGATCTGAGTGAAGCCGAGCTAAACAAACTTCGGGAATGCATTCAGAAACTGCAGCTTCAGAATTGGCAGCTTGCTCAATCAAACAGTCATTTTTTAGCAGAAATCAATTTAGGGAGAGATAGAATAAAATCACTGGGGCATGAGCTTGAATGCAAGGAGGCCTTGCTAAAAGCAACGCGTTTGAATACCGTGGGGAAAGCAGGAATGAATAATGGAAATTATGAATGGCAGGAAGAAGAGAAGCCAACAGAGCAATTTCCACTTGCGGTTAAAATTGACACCAAAGCTTGTAGTGGAAACAGAAAGCCCTCCGGACGAGCTAGAAATCAATCTATGAGCCCTTCAGCTTCATACTCAAAGTATGCGACGAAGAGAGATGATGAAAACAAAAGGCATTGTGTAAGAGCACAATCTGGTAGATTTAGATATCAAATGAGACACCATGAAGAGAACTCGTTTGAAATAGAAGAAGACATGAAATTTACTGCTACTGGAGAAGATGAAGAAGAAAGGAAGAACAACAATGTCAATTCACCATCATCATCTTCAGCTCTGCAAAGATCTTATATTGGAAGACCATTGCACAGAGCAGCTGAAAAGATTCAATCCTACAAAGAAGCTCGTCACAACGCTAAAATCAGACGACATGATTGACAAGTGAGATCAGTATACTGTTTCAGCTAGCAGTTTAAATTTTACTTTCTTGTATGTAGCTATGATTATTCCACCTGTGGCTTGTATTGTTCTTGATGTATAAATATTATTTTGTTTCGGAGTGCATGTATAGTGTAAATTATGTAACTGTCAAGAGAAGATTCGAACTTCTAACTTATTGAAAAGGAGACGATGCTGTAATTGAAATTTGACATTTTGAAGTAAGAAATTC

Coding sequence (CDS)

ATGGCGAAGCGATTGTCGATTGGAAGCAGAGTGCGGAACAAGCTAGCAGATATTACGAATTCCAAGACAATGAGAGCTCATATGGAAGATGAAAGGTCTTCGGAAGCTTGGCGGTCAAATCAAGACGTTGTCGATCAGCTGGTGGAGGAAAATATGGCTCTGATGAAACTTGTCATGGAGAAGAATGAGATTATTGATCTGAGTGAAGCCGAGCTAAACAAACTTCGGGAATGCATTCAGAAACTGCAGCTTCAGAATTGGCAGCTTGCTCAATCAAACAGTCATTTTTTAGCAGAAATCAATTTAGGGAGAGATAGAATAAAATCACTGGGGCATGAGCTTGAATGCAAGGAGGCCTTGCTAAAAGCAACGCGTTTGAATACCGTGGGGAAAGCAGGAATGAATAATGGAAATTATGAATGGCAGGAAGAAGAGAAGCCAACAGAGCAATTTCCACTTGCGGTTAAAATTGACACCAAAGCTTGTAGTGGAAACAGAAAGCCCTCCGGACGAGCTAGAAATCAATCTATGAGCCCTTCAGCTTCATACTCAAAGTATGCGACGAAGAGAGATGATGAAAACAAAAGGCATTGTGTAAGAGCACAATCTGGTAGATTTAGATATCAAATGAGACACCATGAAGAGAACTCGTTTGAAATAGAAGAAGACATGAAATTTACTGCTACTGGAGAAGATGAAGAAGAAAGGAAGAACAACAATGTCAATTCACCATCATCATCTTCAGCTCTGCAAAGATCTTATATTGGAAGACCATTGCACAGAGCAGCTGAAAAGATTCAATCCTACAAAGAAGCTCGTCACAACGCTAAAATCAGACGACATGATTGA

Protein sequence

MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNYEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYATKRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD

Homology

[Close]

BLAST of Carg12298 vs. NCBI nr
Match: XP_022949057.1 (shugoshin-1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 498.0 bits (1281), Expect = 2.0e-137
Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME 60
           MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME
Sbjct: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME 60

Query: 61  KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEAL 120
           KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEAL
Sbjct: 61  KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEAL 120

Query: 121 LKATRLNTVGKAGMNNGNYEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPS 180
           LKATRLNTVGKAGMNNGN+EWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPS
Sbjct: 121 LKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPS 180

Query: 181 ASYSKYATKRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATXXXXXXXXXXX 240
           ASYSKYA KRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATXXXXXXXXXXX
Sbjct: 181 ASYSKYAMKRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATXXXXXXXXXXX 240

Query: 241 XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD 283
           XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
Sbjct: 241 XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD 282

[Close]

BLAST of Carg12298 vs. NCBI nr
Match: XP_022949058.1 (shugoshin-1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 491.9 bits (1265), Expect = 1.5e-135
Identity = 279/282 (98.94%), Postives = 280/282 (99.29%), Query Frame = 0


Query: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME 60
           MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME
Sbjct: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME 60

Query: 61  KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEAL 120
           KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEAL
Sbjct: 61  KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEAL 120

Query: 121 LKATRLNTVGKAGMNNGNYEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPS 180
           LKATRLNT GKAGMNNGN+EWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPS
Sbjct: 121 LKATRLNT-GKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPS 180

Query: 181 ASYSKYATKRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATXXXXXXXXXXX 240
           ASYSKYA KRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATXXXXXXXXXXX
Sbjct: 181 ASYSKYAMKRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATXXXXXXXXXXX 240

Query: 241 XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD 283
           XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
Sbjct: 241 XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD 281

[Close]

BLAST of Carg12298 vs. NCBI nr
Match: XP_022998886.1 (shugoshin-1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 481.5 bits (1238), Expect = 2.0e-132
Identity = 272/282 (96.45%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME 60
           MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLV+ENMALMKLVME
Sbjct: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVDENMALMKLVME 60

Query: 61  KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEAL 120
           KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGR+RIKSLGHELECKEAL
Sbjct: 61  KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRERIKSLGHELECKEAL 120

Query: 121 LKATRLNTVGKAGMNNGNYEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPS 180
           LKATRLNTVGKAGMNNGN EWQEEEKPTEQFPLAVK DTKACSGNRKPSGRARNQSMSPS
Sbjct: 121 LKATRLNTVGKAGMNNGNSEWQEEEKPTEQFPLAVKTDTKACSGNRKPSGRARNQSMSPS 180

Query: 181 ASYSKYATKRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATXXXXXXXXXXX 240
           ASYSK A KRDDENKRHCVRAQSGRFRYQMRH E+NSFEIEEDMKFTAT XXXXXXXXXX
Sbjct: 181 ASYSKCAMKRDDENKRHCVRAQSGRFRYQMRHPEDNSFEIEEDMKFTATGXXXXXXXXXX 240

Query: 241 XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD 283
           XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRH+
Sbjct: 241 XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHE 282

[Close]

BLAST of Carg12298 vs. NCBI nr
Match: XP_023525297.1 (shugoshin-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475.7 bits (1223), Expect = 1.1e-130
Identity = 271/282 (96.10%), Postives = 274/282 (97.16%), Query Frame = 0


Query: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME 60
           MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME
Sbjct: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME 60

Query: 61  KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEAL 120
           KNEIIDL+EAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGR+RIKSLGHELECKEAL
Sbjct: 61  KNEIIDLTEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRERIKSLGHELECKEAL 120

Query: 121 LKATRLNTVGKAGMNNGNYEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPS 180
           LKATRLNTVGKAGMNNGN  WQEEEKPTEQFPLAVK DTKACSGNRKPSGRARNQSMSPS
Sbjct: 121 LKATRLNTVGKAGMNNGNSGWQEEEKPTEQFPLAVKTDTKACSGNRKPSGRARNQSMSPS 180

Query: 181 ASYSKYATKRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATXXXXXXXXXXX 240
           ASYSK A KR DENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTA XXXXXXXXXXX
Sbjct: 181 ASYSKCAMKRKDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTAXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD 283
           XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRR +
Sbjct: 241 XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRQE 282

[Close]

BLAST of Carg12298 vs. NCBI nr
Match: XP_022998887.1 (shugoshin-1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 475.3 bits (1222), Expect = 1.4e-130
Identity = 271/282 (96.10%), Postives = 275/282 (97.52%), Query Frame = 0


Query: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME 60
           MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLV+ENMALMKLVME
Sbjct: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVDENMALMKLVME 60

Query: 61  KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEAL 120
           KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGR+RIKSLGHELECKEAL
Sbjct: 61  KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRERIKSLGHELECKEAL 120

Query: 121 LKATRLNTVGKAGMNNGNYEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPS 180
           LKATRLNT GKAGMNNGN EWQEEEKPTEQFPLAVK DTKACSGNRKPSGRARNQSMSPS
Sbjct: 121 LKATRLNT-GKAGMNNGNSEWQEEEKPTEQFPLAVKTDTKACSGNRKPSGRARNQSMSPS 180

Query: 181 ASYSKYATKRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATXXXXXXXXXXX 240
           ASYSK A KRDDENKRHCVRAQSGRFRYQMRH E+NSFEIEEDMKFTAT XXXXXXXXXX
Sbjct: 181 ASYSKCAMKRDDENKRHCVRAQSGRFRYQMRHPEDNSFEIEEDMKFTATGXXXXXXXXXX 240

Query: 241 XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD 283
           XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRH+
Sbjct: 241 XXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHE 281

[Close]

BLAST of Carg12298 vs. TAIR10
Match: AT5G04320.2 (Shugoshin C terminus)

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-15
Identity = 43/97 (44.33%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 29  EDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQ 88
           E ++      S+Q+   +L +ENM LMK +  +N++++LS  E+ KLR  ++ +Q +N Q
Sbjct: 29  ETQQKENMLFSSQEYAAKLQKENMTLMKALAHRNKLVELSGIEIQKLRINLRSVQEKNLQ 88

Query: 89  LAQSNSHFLAEINLGRDRIKSLGHELECKEALLKATR 126
           LAQ+NS  LAE+N  RDR+K L HEL CK ALLK  +
Sbjct: 89  LAQANSQMLAELNTNRDRLKDLQHELGCKNALLKVKK 125

[Close]

BLAST of Carg12298 vs. TAIR10
Match: AT3G10440.1 (Shugoshin C terminus)

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-12
Identity = 65/202 (32.18%), Postives = 94/202 (46.53%), Query Frame = 0


Query: 7   IGSRVRNKLADITNSKTMRAHMED---ERSSEAWRSNQDVVDQLVEENMALMKLVMEKNE 66
           + S  R KL DITN +  +  M      +      S+++  + L +EN  LMK+VME++ 
Sbjct: 33  MNSAQRRKLGDITNLQNQKNLMNQGAKHQQQAILISSKENAENLQKENTKLMKVVMERDG 92

Query: 67  IIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEALLKA 126
           I    +++L KLR   QK+Q QN  LAQ+N+  LAE N  +D++K L HEL CK  L+ A
Sbjct: 93  I----KSDLKKLRIEFQKVQEQNLLLAQANTRILAEFNTSKDQLKVLQHELGCKNGLVMA 152

Query: 127 TRLNTVGKAGMNNGNYEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASY 186
            ++               +E+  P  +    VK    AC G  K      N +    AS 
Sbjct: 153 RKMLL-------------KEQTLPCTRHASKVKAQANACGGACKTF--QPNDADHEHASG 212

Query: 187 SKYATKRDDENKRHCVRAQSGR 206
           S  A       K +  R  SGR
Sbjct: 213 SSNANSLQRNEKANSKRRVSGR 215

[Close]

BLAST of Carg12298 vs. Swiss-Prot
Match: sp|Q0WTB8|SGO2_ARATH (SHUGOSHIN 2 OS=Arabidopsis thaliana OX=3702 GN=SGO2 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.3e-14
Identity = 43/97 (44.33%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 29  EDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQ 88
           E ++      S+Q+   +L +ENM LMK +  +N++++LS  E+ KLR  ++ +Q +N Q
Sbjct: 29  ETQQKENMLFSSQEYAAKLQKENMTLMKALAHRNKLVELSGIEIQKLRINLRSVQEKNLQ 88

Query: 89  LAQSNSHFLAEINLGRDRIKSLGHELECKEALLKATR 126
           LAQ+NS  LAE+N  RDR+K L HEL CK ALLK  +
Sbjct: 89  LAQANSQMLAELNTNRDRLKDLQHELGCKNALLKVKK 125

[Close]

BLAST of Carg12298 vs. Swiss-Prot
Match: sp|Q4QSC8|SGO1_MAIZE (Shugoshin-1 OS=Zea mays OX=4577 GN=SGO1 PE=2 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 6.3e-13
Identity = 73/198 (36.87%), Postives = 93/198 (46.97%), Query Frame = 0


Query: 15  LADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNK 74
           LADITN+    A            +    V  LV+EN  L+ L+ EK +IIDLS  E+ K
Sbjct: 42  LADITNTGKPNA------------ARSITVPDLVKENTKLLTLLNEKTKIIDLSRVEIYK 101

Query: 75  LRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEALLKATRLNTVGKAGM 134
           LR  +Q  + QN  L Q+NS  LAEIN G+DRIK L HEL C  ALLK        K   
Sbjct: 102 LRLALQASKQQNLHLTQTNSQMLAEINTGKDRIKMLQHELSCTTALLKVKDSELDRK--K 161

Query: 135 NNGNYEWQEEEKPTEQFPLAVKIDTKACS----GNRKPSGRARNQSMSPSASYSKYATK- 194
           N GN     ++K  +   L  K  T A      G+   SG   +   S SA  S    + 
Sbjct: 162 NAGNV----QQKGVKSQVLKTKASTVAVEAHHVGDSVTSGVEHHVVESQSAVSSNTVCQE 221

Query: 195 --RDDENKRHCVRAQSGR 206
             +D + KR   R +S R
Sbjct: 222 PPQDGKQKRMPQRRRSSR 221

[Close]

BLAST of Carg12298 vs. Swiss-Prot
Match: sp|E3VXF2|SGO1_ORYSJ (Shugoshin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SGO1 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11
Identity = 57/162 (35.19%), Postives = 82/162 (50.62%), Query Frame = 0


Query: 44  VDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLG 103
           +  +++EN  L  L+ E+N++I++S  EL K+R  +Q +Q +N QL Q+NS   AEIN G
Sbjct: 50  IADVLKENAKLRHLLAERNKVIEVSRVELQKIRLALQAMQQKNLQLVQANSQMFAEINQG 109

Query: 104 RDRIKSLGHELECKEALL--KATRLNTVGKAGMNNGNYEWQEEEKPTEQFPLAVKIDTKA 163
           +DRIK L HEL C  A+L  K + L  + K   N  N     E+K         K    A
Sbjct: 110 KDRIKLLQHELACTIAVLKVKGSELEKMSKTSNNQQNRAKILEKKTRSSKCAPTKAHQMA 169

Query: 164 CSGNRKPSGRARNQSMSPSASYSKYATKRDDENKRHCVRAQS 204
               R+       QS  PS + S +   +D  NKR   R +S
Sbjct: 170 AGSIRE--HLVEIQSAVPSYT-SCHEPPQDKTNKRCTNRRKS 208

[Close]

BLAST of Carg12298 vs. Swiss-Prot
Match: sp|F4J3S1|SGO1_ARATH (SHUGOSHIN 1 OS=Arabidopsis thaliana OX=3702 GN=SGO1 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.5e-11
Identity = 65/202 (32.18%), Postives = 94/202 (46.53%), Query Frame = 0


Query: 7   IGSRVRNKLADITNSKTMRAHMED---ERSSEAWRSNQDVVDQLVEENMALMKLVMEKNE 66
           + S  R KL DITN +  +  M      +      S+++  + L +EN  LMK+VME++ 
Sbjct: 33  MNSAQRRKLGDITNLQNQKNLMNQGAKHQQQAILISSKENAENLQKENTKLMKVVMERDG 92

Query: 67  IIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEALLKA 126
           I    +++L KLR   QK+Q QN  LAQ+N+  LAE N  +D++K L HEL CK  L+ A
Sbjct: 93  I----KSDLKKLRIEFQKVQEQNLLLAQANTRILAEFNTSKDQLKVLQHELGCKNGLVMA 152

Query: 127 TRLNTVGKAGMNNGNYEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASY 186
            ++               +E+  P  +    VK    AC G  K      N +    AS 
Sbjct: 153 RKMLL-------------KEQTLPCTRHASKVKAQANACGGACKTF--QPNDADHEHASG 212

Query: 187 SKYATKRDDENKRHCVRAQSGR 206
           S  A       K +  R  SGR
Sbjct: 213 SSNANSLQRNEKANSKRRVSGR 215

[Close]

BLAST of Carg12298 vs. TrEMBL
Match: tr|A0A0A0LSM0|A0A0A0LSM0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097670 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 8.3e-79
Identity = 178/283 (62.90%), Postives = 205/283 (72.44%), Query Frame = 0


Query: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME 60
           MAK  SIGS++RNKLADITNSKTMR+H+EDE SSEA +  + V+DQLV+ENM LMKL+ME
Sbjct: 1   MAKTSSIGSKMRNKLADITNSKTMRSHLEDENSSEASQPKKSVIDQLVKENMGLMKLIME 60

Query: 61  KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEAL 120
           +N+II+LSEAEL KLR  IQKLQLQNW LAQSNS FLAEINLGR RIKSL HE+ECKEAL
Sbjct: 61  RNKIIELSEAELEKLRASIQKLQLQNWHLAQSNSRFLAEINLGRKRIKSLEHEIECKEAL 120

Query: 121 LKATRLNTVGKAGMNNGNYEWQEEEKPTEQFPLA-VKIDTKACSGNRKPSGRARNQSMSP 180
           L+A RL   GKA MNN N EWQE EK T Q  LA V  DTK+ +GN KP GR R++SMSP
Sbjct: 121 LRAKRLTVEGKAEMNNRNSEWQEGEKATGQPSLAIVNTDTKSGNGNIKPPGRTRSKSMSP 180

Query: 181 SASYSKYATKRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATXXXXXXXXXX 240
           S SYS    K+   NKRHCVR  S RFR+Q+R  EE  FEI ED+K  A           
Sbjct: 181 STSYSTVVDKQKVVNKRHCVRRHSSRFRHQVRDLEEKLFEI-EDIKLIA---GEKEKNSP 240

Query: 241 XXXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD 283
                     LQR+ IGRPL RAAEKI+SYKE+R N K+RR +
Sbjct: 241 SSPRSEEVSALQRTSIGRPLRRAAEKIRSYKESRLNIKLRRQE 279

[Close]

BLAST of Carg12298 vs. TrEMBL
Match: tr|A0A1S3CJ55|A0A1S3CJ55_CUCME (uncharacterized protein LOC103501433 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501433 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.7e-77
Identity = 175/283 (61.84%), Postives = 204/283 (72.08%), Query Frame = 0


Query: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME 60
           MAK  SIGS++RNKLADITNSKTMRAH+EDE S +A ++ + V+DQLVEENM LMKL+ME
Sbjct: 1   MAKTSSIGSKMRNKLADITNSKTMRAHLEDENSFKASQTRKSVIDQLVEENMGLMKLIME 60

Query: 61  KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEAL 120
           +N+II+LSEAEL KLR  IQKLQLQNW LAQSNS FLAEINLGR RIKSL HE+ECKEAL
Sbjct: 61  RNKIIELSEAELEKLRASIQKLQLQNWHLAQSNSRFLAEINLGRKRIKSLEHEIECKEAL 120

Query: 121 LKATRLNTVGKAGMNNGNYEWQEEEKPTEQFPLA-VKIDTKACSGNRKPSGRARNQSMSP 180
           L+A  L   GK+ MNN N EWQE E+ T +  LA V  DTK+C+GN KP GR R+QSMSP
Sbjct: 121 LRAKCLTVEGKSEMNNRNSEWQEGERATGKPSLAIVNTDTKSCNGNIKPPGRTRSQSMSP 180

Query: 181 SASYSKYATKRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATXXXXXXXXXX 240
           S SYS    K+   NKRH VR  S RFR+Q+R  EE  FEI ED+K  A           
Sbjct: 181 STSYSTVVDKQKVVNKRHFVRRHSSRFRHQVRDLEEKLFEI-EDIKLVA---GEKEKNSL 240

Query: 241 XXXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD 283
                     LQR+ IGRPL RAAEKI+SYKE+R N K+RR +
Sbjct: 241 SSPRIEEASALQRTSIGRPLRRAAEKIRSYKESRLNIKLRRRE 279

[Close]

BLAST of Carg12298 vs. TrEMBL
Match: tr|A0A1S3CIS6|A0A1S3CIS6_CUCME (uncharacterized protein LOC103501433 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501433 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76
Identity = 176/284 (61.97%), Postives = 205/284 (72.18%), Query Frame = 0


Query: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME 60
           MAK  SIGS++RNKLADITNSKTMRAH+EDE S +A ++ + V+DQLVEENM LMKL+ME
Sbjct: 1   MAKTSSIGSKMRNKLADITNSKTMRAHLEDENSFKASQTRKSVIDQLVEENMGLMKLIME 60

Query: 61  KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEAL 120
           +N+II+LSEAEL KLR  IQKLQLQNW LAQSNS FLAEINLGR RIKSL HE+ECKEAL
Sbjct: 61  RNKIIELSEAELEKLRASIQKLQLQNWHLAQSNSRFLAEINLGRKRIKSLEHEIECKEAL 120

Query: 121 LKATRLNT-VGKAGMNNGNYEWQEEEKPTEQFPLA-VKIDTKACSGNRKPSGRARNQSMS 180
           L+A  L   VGK+ MNN N EWQE E+ T +  LA V  DTK+C+GN KP GR R+QSMS
Sbjct: 121 LRAKCLTVEVGKSEMNNRNSEWQEGERATGKPSLAIVNTDTKSCNGNIKPPGRTRSQSMS 180

Query: 181 PSASYSKYATKRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATXXXXXXXXX 240
           PS SYS    K+   NKRH VR  S RFR+Q+R  EE  FEI ED+K  A          
Sbjct: 181 PSTSYSTVVDKQKVVNKRHFVRRHSSRFRHQVRDLEEKLFEI-EDIKLVA---GEKEKNS 240

Query: 241 XXXXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD 283
                      LQR+ IGRPL RAAEKI+SYKE+R N K+RR +
Sbjct: 241 LSSPRIEEASALQRTSIGRPLRRAAEKIRSYKESRLNIKLRRRE 280

[Close]

BLAST of Carg12298 vs. TrEMBL
Match: tr|A0A1S3CIT6|A0A1S3CIT6_CUCME (uncharacterized protein LOC103501433 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103501433 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.5e-69
Identity = 166/283 (58.66%), Postives = 195/283 (68.90%), Query Frame = 0


Query: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME 60
           MAK  SIGS++RNKLADITNSKTMRAH+EDE S +A ++ + V+DQLVEENM LMKL+ME
Sbjct: 1   MAKTSSIGSKMRNKLADITNSKTMRAHLEDENSFKASQTRKSVIDQLVEENMGLMKLIME 60

Query: 61  KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEAL 120
           +N+II+LSEAEL KLR  IQKLQLQNW LAQSNS FLAEINLGR RIKSL HE+ECKEAL
Sbjct: 61  RNKIIELSEAELEKLRASIQKLQLQNWHLAQSNSRFLAEINLGRKRIKSLEHEIECKEAL 120

Query: 121 LKATRLNTVGKAGMNNGNYEWQEEEKPTEQFPLA-VKIDTKACSGNRKPSGRARNQSMSP 180
           L+A  L               +E E+ T +  LA V  DTK+C+GN KP GR R+QSMSP
Sbjct: 121 LRAKCLTV-------------EEGERATGKPSLAIVNTDTKSCNGNIKPPGRTRSQSMSP 180

Query: 181 SASYSKYATKRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATXXXXXXXXXX 240
           S SYS    K+   NKRH VR  S RFR+Q+R  EE  FEI ED+K  A           
Sbjct: 181 STSYSTVVDKQKVVNKRHFVRRHSSRFRHQVRDLEEKLFEI-EDIKLVA---GEKEKNSL 240

Query: 241 XXXXXXXXXXLQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD 283
                     LQR+ IGRPL RAAEKI+SYKE+R N K+RR +
Sbjct: 241 SSPRIEEASALQRTSIGRPLRRAAEKIRSYKESRLNIKLRRRE 266

[Close]

BLAST of Carg12298 vs. TrEMBL
Match: tr|A0A2P4IZ63|A0A2P4IZ63_QUESU (Shugoshin 2 OS=Quercus suber OX=58331 GN=CFP56_58874 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.9e-49
Identity = 130/295 (44.07%), Postives = 168/295 (56.95%), Query Frame = 0


Query: 1   MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVME 60
           MAKR S GS +R KL+DITN +   +  +DE+  E  + ++D +D+L++E M L+KL+ E
Sbjct: 6   MAKRSSFGSIMRKKLSDITNLQAQGSPSQDEKQPEISQPDKDYIDKLLKERMTLVKLIAE 65

Query: 61  KNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEAL 120
           +N+II+LS AEL K+R  +QKLQ+QNW LAQSNS   AE+NLG+D++K L HEL CK AL
Sbjct: 66  RNKIIELSGAELQKMRVSLQKLQMQNWNLAQSNSQMFAELNLGKDKLKELRHELGCKNAL 125

Query: 121 LKATRLNTVGKAGMNNGNYEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPS 180
           LKA  +   GK      N   QE E   EQ       D K C  NR+ +  AR+QSM PS
Sbjct: 126 LKAKNMELEGKTETKRKNAGSQEGEVAAEQSLHVTNDDDKTCKRNRRRT--ARSQSMGPS 185

Query: 181 ASYSKYATKRDDENKRHCVRAQSGRFRYQMRHHEENSFEIEEDMKFTATXXXXXXXXXXX 240
            S+ K   K   ENKR C+R QS RF+   R   EN FEI ED KF  +           
Sbjct: 186 TSHQKVVDKEKVENKRRCLRRQSARFKSHEREPTENLFEI-EDAKFLVSQSHENSIREEP 245

Query: 241 XXXXXXXXXLQ---------------RSYIGRPLHRAAEKIQSYKEARHNAKIRR 281
                     +               RS IGRPL +AAEK+QSYKEA   +K+RR
Sbjct: 246 VPLNSSFKNEEEGENCVPRNEAQASLRSSIGRPLRKAAEKVQSYKEAPLKSKMRR 297

The following BLAST results are available for this feature:

BLAST of Carg12298 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949057.1	2.0e-137	99.29	shugoshin-1 isoform X1 [Cucurbita moschata]	[more]
XP_022949058.1	1.5e-135	98.94	shugoshin-1 isoform X2 [Cucurbita moschata]	[more]
XP_022998886.1	2.0e-132	96.45	shugoshin-1 isoform X1 [Cucurbita maxima]	[more]
XP_023525297.1	1.1e-130	96.10	shugoshin-1 [Cucurbita pepo subsp. pepo]	[more]
XP_022998887.1	1.4e-130	96.10	shugoshin-1 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg12298 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G04320.2	1.8e-15	44.33	Shugoshin C terminus	[more]
AT3G10440.1	2.5e-12	32.18	Shugoshin C terminus	[more]

BLAST of Carg12298 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0WTB8\|SGO2_ARATH	3.3e-14	44.33	SHUGOSHIN 2 OS=Arabidopsis thaliana OX=3702 GN=SGO2 PE=2 SV=1	[more]
sp\|Q4QSC8\|SGO1_MAIZE	6.3e-13	36.87	Shugoshin-1 OS=Zea mays OX=4577 GN=SGO1 PE=2 SV=2	[more]
sp\|E3VXF2\|SGO1_ORYSJ	1.2e-11	35.19	Shugoshin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SGO1 PE=2 SV=1	[more]
sp\|F4J3S1\|SGO1_ARATH	4.5e-11	32.18	SHUGOSHIN 1 OS=Arabidopsis thaliana OX=3702 GN=SGO1 PE=3 SV=1	[more]

BLAST of Carg12298 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LSM0\|A0A0A0LSM0_CUCSA	8.3e-79	62.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097670 PE=4 SV=1	[more]
tr\|A0A1S3CJ55\|A0A1S3CJ55_CUCME	2.7e-77	61.84	uncharacterized protein LOC103501433 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3CIS6\|A0A1S3CIS6_CUCME	1.3e-76	61.97	uncharacterized protein LOC103501433 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3CIT6\|A0A1S3CIT6_CUCME	3.5e-69	58.66	uncharacterized protein LOC103501433 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2P4IZ63\|A0A2P4IZ63_QUESU	6.9e-49	44.07	Shugoshin 2 OS=Quercus suber OX=58331 GN=CFP56_58874 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12298-RA	Carg12298-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 259..279
None	No IPR available	COILS	Coil	Coil	coord: 65..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..259
None	No IPR available	PANTHER	PTHR34373	FAMILY NOT NAMED	coord: 1..280
None	No IPR available	PANTHER	PTHR34373:SF3	SUBFAMILY NOT NAMED	coord: 1..280

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12298	Cla005078	Watermelon (97103) v1	carwmB0440
Carg12298	Csa1G097670	Cucumber (Chinese Long) v2	carcuB0472
Carg12298	MELO3C004971	Melon (DHL92) v3.5.1	carmeB0449
Carg12298	ClCG03G002610	Watermelon (Charleston Gray)	carwcgB0436
Carg12298	CSPI01G13170	Wild cucumber (PI 183967)	carcpiB0477
Carg12298	Cucsa.207680	Cucumber (Gy14) v1	carcgyB0511
Carg12298	CmaCh01G005210	Cucurbita maxima (Rimu)	carcmaB0613
Carg12298	CmoCh01G005530	Cucurbita moschata (Rifu)	carcmoB0596
Carg12298	Cp4.1LG02g12680	Cucurbita pepo (Zucchini)	carcpeB0622
Carg12298	CsGy1G013280	Cucumber (Gy14) v2	carcgybB0449
Carg12298	MELO3C004971.2	Melon (DHL92) v3.6.1	carmedB0452
Carg12298	CsaV3_1G013340	Cucumber (Chinese Long) v3	carcucB0474
Carg12298	Cla97C03G053670	Watermelon (97103) v2	carwmbB0467

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12298	Wax gourd	carwgoB0528
Carg12298	Wax gourd	carwgoB0532
Carg12298	Silver-seed gourd	carcarB448
Carg12298	Silver-seed gourd	carcarB450
Carg12298	Cucumber (Gy14) v2	carcgybB0451
Carg12298	Cucurbita maxima (Rimu)	carcmaB0611
Carg12298	Cucurbita moschata (Rifu)	carcmoB0594
Carg12298	Cucurbita pepo (Zucchini)	carcpeB0620
Carg12298	Wild cucumber (PI 183967)	carcpiB0479
Carg12298	Cucumber (Chinese Long) v2	carcuB0474
Carg12298	Cucumber (Chinese Long) v3	carcucB0476
Carg12298	Watermelon (Charleston Gray)	carwcgB0432
Carg12298	Watermelon (97103) v1	carwmB0439