Cp4.1LG01g25630 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g25630
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionActin-related protein 2/3 complex subunit 5
LocationCp4.1LG01 : 20936164 .. 20945168 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCGGACACATTTTCCATTTCAGATTCTTACCTCCCAAGCTTCCTTTATTCATTTCGGGCTCGGGTTGGGTTAAAACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATTTTGCATGAAAGTTCTGCACTCTCTGCGCATTTGAATTCCAGAGCCGAAAGCTTCCGTACCCTCTGGCTTTCTGCGGCGCAAAATAGAATTCGTCAGAGCTATGTTTCACTCACACTGCACTCTTTCGAGGAAAGGCCCTTCAGGTGCCATTTGGGTCGCTGCTTACTTCTTCAAGAAGCTTAAGAAATCTCTGGTTATAGAGACTGATATTCCATCCTCTGTTGGTTCGCCTTCCTCTTTCTTCAAGTCTTTAAATTTTATTCCCATTTTTCGTATATGCATTTGGGATTTGGAGATAACGGGAATGTGTCCCATTATCGAGATGTTTACTGAAGTGATTCCACTGCGCCTGGTTTTGGGCTTATGGAGTTGCTTCATAGCGTTTAAATGATTATATTTCCTAACATATTGTGAATAGTTGTAGTTTTCTGTTGCCAATTTTTGAAAGTAGGACCCTGGAAACCTTCTCGTACTCGTAGTGCATTTGTGATTTTGATTCTTGTTGTTTGTTTATGAAATCCATTATCGTAAAAGAGTCCATTTAGTGAGGGAATTACCTGTTTGATTGAGTTTCTGAGACTTGATTTTATAATTGGTTTGGATTTCTGCTTTTACAGATCATCCGATTCACTAGGTTACCTTCTTCCTAGAAAAACCTAAAACGTAAATAGACGACCGGTTGGAATGTTCTTAGAATCTATTTCGTTTTTTTTTTGGTAATACTGTTCTTTTTTTTAAAAAGATTAGGAATTTATGCGTGAAAATAATTGCGGCTGTGTGCACTTTGTGGAGAAGAACGAGTAATGTCGTTTGAATATGAAAATGTCCAAAAGTGGACCGCCATGGACTTGGAGGTCTTATGTGTTGCTTTCCAGCTTGTTTTTTTTATAAAACTTTTTAAAATTTGTGAAAACAGTGATTAGATAGATGGCAATCCTTCAAAAGCTCGTAGAGTTTAATAGAAGAACAGCTTCTATTGATTTGGAAAAGAAAGCTTCCACAACAACAAAACATGGGGGAAACAACTTTTAGAAACAAATGTCAAATAATCTTGTGATTCCACTATCGAGAGGTTTAGTAGTCTAAGAACAGTCGAGTTGTCTGTAGAGCTTAGCTAGAACGAATGTGTGATTTCATAGTGATAGCAAAAGGAGTAATTGGATCTATCTATATGTATAGAACTCAGGGATAACCATATATGGAATACCTATCCCAAATGTGTGAATCCCACGTTGGTTGGGGAGGAGAATGAAACATCCTTTATAAGGGTGTTGAAACTTTTCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGACCGAAAGGGAAAGCCTAAAGCGGATAATATTTGCTAGCGGTGGGCTTGGGTCGTTACAGTTGGTATCAGAGTCAGACATTGGACTATGTGCCAACGAGGAGGCAGTTCCCCGAAAGGGGGTAGACATGAGACGGTGTGCCAGTAAGGACGCTGGGCTTTGAAAGGGGGTGGATTTGGTGGGGTCCCACATCAATTGGAGAAAGGAACAAGTGCTAGCGAGGACGCTAGGCCCCGAGGGGGTGGATTGTGAGAATCCCACATTGGTTGGAGAGGAGAACGAAACACCCTTTATAAGGGTATGGAAACCTTTCCTTAGCAGATGCGTTTTAAAGGCTTGAGGGGAAGCCCGAAAGGAAAAGCTCAGAGAGGACAATATCTGCTAGCGGTGGACTTGGGCCGTTACACCAAATGACTGTTAAGGGCTCTATTTGTAACTATCGTTTTCTACGCTCAGTTTCGATCACCATTGTTCCTCTATCCTGTTCATGTTTCCGTGTGTTTGTAAATTTTGCTAGACGAGTTAAATGTTGCTTACAGGTACAGTATAGTTTTCTAATTATTAATTGAAAGGGCTTATGCCCTTTCTACTGTGATTCATAATCTGTACTAATTTCTAGTTCATTCCCAGTTTTTTCTACAATCAGTTATGCTGCATGCTTCAAAATGATCTGCTTTTTGATACTTTCTTTTCAAACTGAAATTGCATATGCACACATTTCCTCTTCATTTACTTGCTGTTACTTCTATTTTGTATGGGCTCTGATCGCTCTTTCCTCTCTGTCCTGTATTTGTTGCCTGTTTGTAGATAAAATTTTGCAAGATGAAATGAACGCTGTGACATATAGAGTAATGGCCTACCTCCTCCTCGGCATTGCCCGGATATATTCCAAAAAAGTTGAATATCTGTATGTTGACTGCAATAAAGTGCTGACCGAAATCAATGAATTTGTGGTCACCACAAAGAATAGTGCTAGAAAGGAAAAGCAAACACCTTATTATGCTATTACTCTTCCTAAAAGATTTGAACTCGACTCGTTTGATCTGGGGATTATTGAGGACCTTACTGGGTAGGTTATCTAGTTTAGTTAATTTCTCTGTTTGGCTTATCTTATTTATCTTTTATTATAAATATTTCTAACTCGATGTTCCTTCGTTTTTTAGAAGCAACATGGTATGCCATGAAGAGATTACCCTCAAAGGTATGTGTTTATTTTACATTCTTCTGCTAATACTTCTTTTTTTCTAACAATCCTATTCTGCATGTCGTATAATTTATACAGATAGCATGTGGAAAAACGACATCACACTGTCAGTTGACGAGGTAAGTGTTTCATCATGTTTAGCGCTTAAACGAGTCAGACTAAATTAATTTGATTGAGCGTTTGTAAATAGTTGTTAAAGTCGATTTAAGAGTTCAGCTTAAGAAGTTCAAACTTTATCAACGTGTATAGAGTTGGAAATTTTATCTTACACTGTTGCAGAACCATGGCGAGGAATTCACTCCACTGCACAGTATTTGCTATTCTGATGATACCTTATTCAAAGAGTATGTAGGCCAAGCTCCACTGTTGCTTCCTTGACTTCAATATTCGATTTTCATTCTATGCAGGGTGATCATTTTTTTAATATTCTTATTGCTCCAGAGTCTTTTCGCCTCACCTCAAGGACAGTGAGATGCAGGCAAGCTCATTACATCACGATATTGTGTCAGAAAATTTTCAAGTGAGTGCATTCTCTGATGAAAATTATGAGATTGAGGTATTTGGAATTGAGAATACGCATATCAAAGCAATCGAACAATTTAATGAAGATCATCGATCTGATGAAGAAGAGATGAAGAAGGAGAAAATGCTGCAATATGAACATGTAGTTCCTGAAGCAAGCACTGAAATGGTTTTGACTGATAGATTTTCTCATGAAGAAACTGTAATTGTCAAGGAAGTTTCTATAACAGAGCATTTGAAATTATCTGAAGAAGATAATCAGAGTGTGGGAATTCGATCAGAAAATGAACTTGAGTTCATGAATGGAGGCGATAACATCAGCATCTTGGAAAGAAGCATGGAGAAACTTAGAGATAATTCTGCAACTCTTGTGGATAGCATGGATATCAACATGTCTTGGAGTGCACAAAATGAACCTACAAAACTTATTGGAACGGATAGTGAAGGGGATACTTTGAATTTTCTTGAAATGCAATCACCTGAAATGGAAGACCATGATGGAACTCGAAACAGTCTTCAACTATCTATTTCACTCGATGGAATGTTTGATTCCAAATTTCCAGATTTTACAGGTGGGTAAAATTTCTGAACCAACTTCCATCATTTAAATGATTTATCTACAATTTTGTGTAATTTTGACTACTTAAATCACGTGTTAATCTGTTTTTTTTCATGTAGGTACCAAGACACCTGAGTTTACAACAATTTCGACTCCAGCTAATAAGGAGAGACCGAGGACATCAAGGAAGAGAAAATGCATTGTTGATGATCCTATTGTTTTGTCGAACGAGTAAGTTCCCTCGTAGTTTTGTTTAGATCAGTTTTGTTGGTGAATTGTTATCTTCTTTCGACACACAAATGAGATAACATGTTGCTAAAACTGTATCAGAAAATTTAAGCGAAGCATATATGATGCCAGCAACTTGGTTTCAAAAAGAAGCAAATGTCCTCGTAGTGGTCTTGCTGTCTGGAAAGCTAGTCAAATTTCTACTCTCTCCTTTGGCTTCTCGGTGCCTTTGATGTCCTGTAAGTCTATGAGGCTCTTGACTGGGTTCTTTGAAAATCATATTTGATCTAAAAGCAAAAAAGTATTAAATTTTAATTTGTCCTCTGATGATGTTTTTCTACAGGTGTTTCGCCCGAGCTTAAGTCCCTTCTTTCTAAGACGTTAGTGAACATATCGGAATCTGCTGAATTGGTGAAATCTCATGAAAACTTGGATGATCCAAGTTCTCCAGCTTTTGACATGTTAGTGAAAATGGATAGCCCGGTCACAGTTTCCAAAACTGGAGAGCATTCAAATGAACCAGAGATTTCTGGATCTCCCACTACCTACAGATCTGAACAAACCACCATTTCTGTGGATAGAGCTTCAGTTTCTGAAGCTTCTGTCCTGGAACAGTTGTCTACATCAGAACCTCAAACTTCAGATAGACTGGAGCAAATAGCAATAGCACCAGGGACACCTGTTCGGTGCTCAACATCAGCTAGATTATTTGGGAGTCCAGATAGCCCTAAAGTTCCTAACTCAAAAGCAGTAAGGCTTGTTAAATTTTTGGGAAATGTATTCAATATATTTTGTTGATCCCAGTTTTCGTCGTTTGTTCAGCAGCTAAGGTTTTGTGAAGAGGATGCACTGGAACCGGGCAGCCCTGCGAGAACAAGGTAAGGTGGATCGGATTCGAGTTTGTGAACTGCTCTTACATTTCATTCCCACTTGGTGTTGACTTGTGAGAGCTGTGATGATGGTACAGAATGGTATGTGGGTGTCTTCTCCAAAATTTTAGAAATCAAAGGGTGCAAACCGTGGGAGAGGCTGCAAATTTGAGACAGCTTCTTAGCAGGAAAACGAGAAAAGAGAGTGCTAAAGTATTCTATGAGATATTGGTATGTTTGTTTGCTTGTTTGCTTGTTTGTTTGTTGTTAGCAAAAGTAAAGCATAATTGGGGTGTCTCATATACAAATATGGTGCGTAGTGCAGGTACTGAAAACCAAAAACTGCGTGGATGTGAGACAAGATTGTGCGTACGGTGACATCTTAGTATGGAAATTGGGAAACTGGGACACACAGGCCAGTTTTGATGTAGAGTAGAGTAGGTGATGAGTTTTAGGTGGTGTGGAAGGGGCGTGAGGCTAGTTTTGATGTACAGTAAGTTCCATAAGTTAGCAGCAGCAGCAGCCTGTGCTTGGTGTTGTAATAGATGATGATCTTTTGATGAATGGTTCATATCAGACAGAAGTGGAACCAAAGGCGTTTGGCTCGGATTCAGCACACTATTTGGACACTCTTTTGATCATCTTTTTGCTCGAAGAATAACATCTATTTTTACAACAACAACAATAATAATAATATTTTTATCATTACGCTCCCATGTAATTTTAATTTTATTATATATTTATATCTAAAAAATTAAGAATTTTCTCCAAAATAAATATTTGCCGGCTGCCGCAGCTGCACCCACGCACCAACTGTCTTCTTTCGTTTCTCATTATCTTCGTTTCTGCTGCTGCCGTTGCTAGTCGCCGGTCGTCGGTACGCCCCCACCGCCACGTTTTTCTTCTTCTCTTCTTATATCCTTCCCTGCCGCAACCTCACGCCACCATGGGTCAGTTTTCTATCGCAGCCTCTCCATCTTTCGATTTTTGCCATCGAAGTCTGTCCGGAAGCTTTTTTTTCTTTTTTTTTTTCATAAGAATTCCGCATATTTTCATATTTAGGATTTNTCAAAATAGGGTAAAATTGAGATTAGGCCAATTTTAGTTTAAAATCCTGCCAAACCCGACTTATTTTGGATGGAAAACTTTTGGATCAAAGCAAGATCTCATATCATTTTGGATTTCAAATTCTATTTTTTCTATTCATACCAAACAGAAGTGCCTTCTAAATCCAGGGTTTCCTAACAAAGGCTAAGTTCGAGGAAATTCTACTGGAGGTTGGGTGATAGGCGAAAATGTCAGATGCATTTGTGGAAGCAGATAATGCAGAAGCCATAATCACTAGAATTGAGCACAAATCTCGGAAGATCGAGAGCTTACTTAAACAGTAATGATCTCTATATCTGCTCTTTGATTTCTAAGATTTAAATATGTTTAGCTCCTCCTAACTTCCATTTTTAATAATTGAAAATGCCTCGATTAGCAATTTGTTTGCTCGTTCAGGTCTAAAACAGTCGAAGCTCTAAAAACTGCCCTCGAAGGTTCGCCTCCGAATACACGAGATGAGCGCTGCAAGGTATCCTTTCTTTCATTTATGATCTCTTGCATGCTTCGTTATTGTTTTTCTACATCGTGTTCTTTTTTCCTTGCAAGATCTAATAAGTTTTTGTGTTCATTATTATTAAATTTGTGGGTGATCTTTAGAAGTCTATAGGCAATTACGGTAGGTTCTCTGCTATTGGATGATAGTCATTTTCAATTATCGTGATCTTTTTGAATGCTTTTCCTGTATTATCTCGATGATGGGGTCAATTAGAACTTGCTGGTAGTTGATATATTTTTCGGAAGTAGTCTGCTCCATTTGCTTGCAGCTGCTCAAAATGGATGGACGTGTTATATTTTACGTTTACGTGTTGTCGGTCTGCCTGAATTGGGCGAGAATTGAATAAATCTGATGTGATTTTTTGGACTTCTGCAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTTATGGCTATAAAGGACGTAGATGGGATGTTTTCTTCGTTGGATCCGGAGTATTATGATATCCTAATGAAGTGAGTTCTTATGGTATTTAACTGCTAAGATGTCTATATTCCTATTGCTTCGATTATCTTTATGCGTATGAAGCTGGTTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTCATGTTGATAAAAAATGATATGTCCACGTTGATAGGGATTGTGTTAGTCCCTAGTGCTTGGATGATTGGATGGCTGATCTTCATAACCGTTTAGCTAGAAATACCTCGTCACACCTTCTTAAGTTAGAAGGTCACAACCAGCCTTTCTCTCAATACACAGCAGCACTTGATTCCACTGATGTCTGCCCCTTATTTGTCTCCCACATTAAGTTCTGAAGTTTTACAGAATTTTGCTAATCTTTTGTTAAGGGCATGTTTGGAGTAACTTTCGAAGTGAAGTCATCCTAAACACCAGTAAGAAATAAGTATGGGCCCTTGCCAACCCTGATTGCACTACAAAGTTAAAATTATACAGTCCCGGTCGGGTTTCTTGAGATTATTTTGGGGTTAAAATTCCAGCATGAGGGCATAGAATTTTGGGGAGTGATACAAACCAAATAACTATATCGATATTATGTAGAATGAAGAAATGAAAAAGGGCTAGTGTTTTAGGAACTTTGAACCTTCTTCTTGAGTTCTTTTTTTTTTCAAGCTTAAACCAACTAAACTATTACCTACTTCAATCTCCTTCCCCTCCTAAAAAACCTCCTAGCTAATGACTATTATACCTTTACCAACCTAATGATATTTCTGGTTTCTTCTACCCAATATCTTTGCAAGAAAGCGCCTATGAACTATCTTCTATTTCGTTGTATTCTCTTTTTCTGACCCATAATAGGTAACTTTTATTGGTCTTTCAGGCTGTTTTCTTGTTTCTTGAACTTGAGCATTGATTGACATAGATATACTAGTACTTACAGGTATTTGTACAGAGGGTTGTCAACTGGTGATCGCCCCACATGTGATCAGTGTCTCAGGATACATGAAAAATTGACAGAAAAGGCTGGCTTAGGCTGCATTCTCCGTGCCCTTGCAGATACTATCAACACAGTTTGATTTTCCTTAACTTGATAGAACATTGCGAGCCCTCACCCTTTGGCCGATGTCAAAAATCATATTATTTTCTCTCAGTGTATGTGAAATTGCTTTTCAGAGAATGTTTGTGTTAAGCTGAGTAGACGTCTATAGCTGTCAGCTGTCACATTATATTAGAAAAAAACAGGTACTGAATTTCATTGAGTTCAGGATACTTTGAATTGCATTATTTTGAAGAACGTGTGAGTATTGTTATTTGTTTGGCTAGATTGGAAGGGACCAAAATATATACGGCTTATTTCTTTGTTCAGGATTACACAACTTGTAGGAATTACTTTCCGACTTTAAGAAATATGATTCCCATTCAATATAAACCTTTGTCAATAACTCAACTTGTTTTCATTTTACTATTGAACATGATTTAAGATCTAAGAAAGTATTGAGTAACTCTATAGTATTGAATGGGAGTCATATCAACACACAACTTATTATTATTATTAGTTCAAGAATATTCAATATTTTGAAACAACATACACCATCTTTTGAAAACTAATTAATAAAATAAAGTTGTTGAACTAAAAAAACTCGAAACGCATCCTTTACTGGCGCTCCATGAATCAGTGAGCAATGGTTTTGGCTTTCCAAGGACCTTCAGCTGTAGCAGAGGAGGTGCTGCCTGGTTTGGTGTTGAGAGGTGGCGGTTCTCACGTTTTGGCTGTCCAAAATATTGATGAAATGCATTGAGATATATGGGTAAGAAATCCTCAAATTTACAATTATCATACCTGCTGCTTGTCATCTGCAAAGAAAAGCCGAGTACAGTAGAGAATAGGCCGAGTGTTGTACCACCTTGTCGGGTTCACGATAAGACTCAAGATGCCTCCCTCCCCCCTCCACAGTTCTACACTTTTGACCATCCCACAGTTTCTCGAGAGTAGACCACTGGTTCGGCGTTTATAATCAAACTTTGAAATAAAGGCATATGCTTTGAAGTAATAATCAAAGGAAAGAGTCATGAATCAGCAGTATGAGATGATCTTCATGTATGTTACAACATTCTCCCAAATGCCTC

mRNA sequence

TCCGGACACATTTTCCATTTCAGATTCTTACCTCCCAAGCTTCCTTTATTCATTTCGGGCTCGGGTTGGGTTAAAACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATTTTGCATGAAAGTTCTGCACTCTCTGCGCATTTGAATTCCAGAGCCGAAAGCTTCCGTACCCTCTGGCTTTCTGCGGCGCAAAATAGAATTCGTCAGAGCTATGTTTCACTCACACTGCACTCTTTCGAGGAAAGGCCCTTCAGGTGCCATTTGGGTCGCTGCTTACTTCTTCAAGAAGCTTAAGAAATCTCTGGTTATAGAGACTGATATTCCATCCTCTGTTGATAAAATTTTGCAAGATGAAATGAACGCTGTGACATATAGAGTAATGGCCTACCTCCTCCTCGGCATTGCCCGGATATATTCCAAAAAAGTTGAATATCTGTATGTTGACTGCAATAAAGTGCTGACCGAAATCAATGAATTTGTGGTCACCACAAAGAATAGTGCTAGAAAGGAAAAGCAAACACCTTATTATGCTATTACTCTTCCTAAAAGATTTGAACTCGACTCGTTTGATCTGGGGATTATTGAGGACCTTACTGGAAGCAACATGGTATGCCATGAAGAGATTACCCTCAAAGATAGCATGTGGAAAAACGACATCACACTGTCAGTTGACGAGAACCATGGCGAGGAATTCACTCCACTGCACAGTATTTGCTATTCTGATGATACCTTATTCAAAGAAGTCTTTTCGCCTCACCTCAAGGACAGTGAGATGCAGGCAAGCTCATTACATCACGATATTGTGTCAGAAAATTTTCAAGTGAGTGCATTCTCTGATGAAAATTATGAGATTGAGGTATTTGGAATTGAGAATACGCATATCAAAGCAATCGAACAATTTAATGAAGATCATCGATCTGATGAAGAAGAGATGAAGAAGGAGAAAATGCTGCAATATGAACATGTAGTTCCTGAAGCAAGCACTGAAATGGTTTTGACTGATAGATTTTCTCATGAAGAAACTGTAATTGTCAAGGAAGTTTCTATAACAGAGCATTTGAAATTATCTGAAGAAGATAATCAGAGTGTGGGAATTCGATCAGAAAATGAACTTGAGTTCATGAATGGAGGCGATAACATCAGCATCTTGGAAAGAAGCATGGAGAAACTTAGAGATAATTCTGCAACTCTTGTGGATAGCATGGATATCAACATGTCTTGGAGTGCACAAAATGAACCTACAAAACTTATTGGAACGGATAGTGAAGGGGATACTTTGAATTTTCTTGAAATGCAATCACCTGAAATGGAAGACCATGATGGAACTCGAAACAGTCTTCAACTATCTATTTCACTCGATGGAATGTTTGATTCCAAATTTCCAGATTTTACAGGTACCAAGACACCTGAGTTTACAACAATTTCGACTCCAGCTAATAAGGAGAGACCGAGGACATCAAGGAAGAGAAAATGCATTGTTGATGATCCTATTGTTTTGTCGAACGAAAAATTTAAGCGAAGCATATATGATGCCAGCAACTTGGTTTCAAAAAGAAGCAAATGTCCTCGTAGTGGTCTTGCTGTCTGGAAAGCTAGTCAAATTTCTACTCTCTCCTTTGGCTTCTCGGTGCCTTTGATGTCCTGTGTTTCGCCCGAGCTTAAGTCCCTTCTTTCTAAGACGTTAGTGAACATATCGGAATCTGCTGAATTGGTGAAATCTCATGAAAACTTGGATGATCCAAGTTCTCCAGCTTTTGACATGTTAGTGAAAATGGATAGCCCGGTCACAGTTTCCAAAACTGGAGAGCATTCAAATGAACCAGAGATTTCTGGATCTCCCACTACCTACAGATCTGAACAAACCACCATTTCTGTGGATAGAGCTTCAGTTTCTGAAGCTTCTGTCCTGGAACAGTTGTCTACATCAGAACCTCAAACTTCAGATAGACTGGAGCAAATAGCAATAGCACCAGGGACACCTGTTCGGTGCTCAACATCAGCTAGATTATTTGGGAGTCCAGATAGCCCTAAAGTTCCTAACTCAAAAGCAGTAAGGCTTGTTAAATTTTTGGGAAATGTATTCAATATATTTTGTTGATCCCAGTTTTCGTCGTTTGTTCAGCAGCTAAGGTTTTGTGAAGAGGATGCACTGGAACCGGGCAGCCCTGCGAGAACAAGAATGGTATGTGGGTGTCTTCTCCAAAATTTTAGAAATCAAAGGGTGCAAACCGTGGGAGAGGCTGCAAATTTGAGACAGCTTCTTAGCAGGAAAACGAGAAAAGAGAGTGCTAAAGTATTCTATGAGATATTGGTACTGAAAACCAAAAACTGCGTGGATGTGAGACAAGATTGTGCGTACGGTGACATCTTAGTATGGAAATTGGGAAACTGGGACACACAGGCCAGTTTTGATGTAGAGTAGAGTAGGTGATGAGTTTTAGGTGGTGTGGAAGGGGCGTGAGGCTAGTTTTGATGTACAGTAAGTTCCATAAGTTAGCAGCAGCAGCAGCCTGTGCTTGGTGTTGTAATAGATGATGATCTTTTGATGAATGGTTCATATCAGACAGAAGTGGAACCAAAGGCGTTTGGCTCGGATTCAGCACACTATTTGGACACTCTTTTGATCATCTTTTTGCTCGAAGAATAACATCTATTTTTACAACAACAACAATAATAATAATATTTTTATCATTACGCTCCCATGTAATTTTAATTTTATTATATATTTATATCTAAAAAATTAAGAATTTTCTCCAAAATAAATATTTGCCGGCTGCCGCAGCTGCACCCACGCACCAACTGTCTTCTTTCGTTTCTCATTATCTTCGTTTCTGCTGCTGCCGTTGCTAGTCGCCGGTCGTCGGTACGCCCCCACCGCCACGTTTTTCTTCTTCTCTTCTTATATCCTTCCCTGCCGCAACCTCACGCCACCATGGGGTTTCCTAACAAAGGCTAAGTTCGAGGAAATTCTACTGGAGGTTGGGTGATAGGCGAAAATGTCAGATGCATTTGTGGAAGCAGATAATGCAGAAGCCATAATCACTAGAATTGAGCACAAATCTCGGAAGATCGAGAGCTTACTTAAACAGTCTAAAACAGTCGAAGCTCTAAAAACTGCCCTCGAAGGTTCGCCTCCGAATACACGAGATGAGCGCTGCAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTTATGGCTATAAAGGACGTAGATGGGATGTTTTCTTCGTTGGATCCGGAGTATTATGATATCCTAATGAAGTATTTGTACAGAGGGTTGTCAACTGGTGATCGCCCCACATGTGATCAGTGTCTCAGGATACATGAAAAATTGACAGAAAAGGCTGGCTTAGGCTGCATTCTCCGTGCCCTTGCAGATACTATCAACACAGTTTGATTTTCCTTAACTTGATAGAACATTGCGAGCCCTCACCCTTTGGCCGATGTCAAAAATCATATTATTTTCTCTCAGTGTATGTGAAATTGCTTTTCAGAGAATGTTTGTGTTAAGCTGAGTAGACGTCTATAGCTGTCAGCTGTCACATTATATTAGAAAAAAACAGGTACTGAATTTCATTGAGTTCAGGATACTTTGAATTGCATTATTTTGAAGAACGTGTGAGTATTGTTATTTGTTTGGCTAGATTGGAAGGGACCAAAATATATACGGCTTATTTCTTTGTTCAGGATTACACAACTTGTAGGAATTACTTTCCGACTTTAAGAAATATGATTCCCATTCAATATAAACCTTTGTCAATAACTCAACTTGTTTTCATTTTACTATTGAACATGATTTAAGATCTAAGAAAGTATTGAGTAACTCTATAGTATTGAATGGGAGTCATATCAACACACAACTTATTATTATTATTAGTTCAAGAATATTCAATATTTTGAAACAACATACACCATCTTTTGAAAACTAATTAATAAAATAAAGTTGTTGAACTAAAAAAACTCGAAACGCATCCTTTACTGGCGCTCCATGAATCAGTGAGCAATGGTTTTGGCTTTCCAAGGACCTTCAGCTGTAGCAGAGGAGGTGCTGCCTGGTTTGGTGTTGAGAGGTGGCGGTTCTCACGTTTTGGCTGTCCAAAATATTGATGAAATGCATTGAGATATATGGGTAAGAAATCCTCAAATTTACAATTATCATACCTGCTGCTTGTCATCTGCAAAGAAAAGCCGAGTACAGTAGAGAATAGGCCGAGTGTTGTACCACCTTGTCGGGTTCACGATAAGACTCAAGATGCCTCCCTCCCCCCTCCACAGTTCTACACTTTTGACCATCCCACAGTTTCTCGAGAGTAGACCACTGGTTCGGCGTTTATAATCAAACTTTGAAATAAAGGCATATGCTTTGAAGTAATAATCAAAGGAAAGAGTCATGAATCAGCAGTATGAGATGATCTTCATGTATGTTACAACATTCTCCCAAATGCCTC

Coding sequence (CDS)

ATGTCAGATGCATTTGTGGAAGCAGATAATGCAGAAGCCATAATCACTAGAATTGAGCACAAATCTCGGAAGATCGAGAGCTTACTTAAACAGTCTAAAACAGTCGAAGCTCTAAAAACTGCCCTCGAAGGTTCGCCTCCGAATACACGAGATGAGCGCTGCAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTTATGGCTATAAAGGACGTAGATGGGATGTTTTCTTCGTTGGATCCGGAGTATTATGATATCCTAATGAAGTATTTGTACAGAGGGTTGTCAACTGGTGATCGCCCCACATGTGATCAGTGTCTCAGGATACATGAAAAATTGACAGAAAAGGCTGGCTTAGGCTGCATTCTCCGTGCCCTTGCAGATACTATCAACACAGTTTGA

Protein sequence

MSDAFVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILRALADTINTV
Homology
[Close]
BLAST of Cp4.1LG01g25630 vs. Swiss-Prot
Match: ARC5A_ARATH (Actin-related protein 2/3 complex subunit 5A OS=Arabidopsis thaliana GN=ARPC5A PE=1 SV=2)

HSP 1 Score: 234.2 bits (596), Expect = 8.3e-61
Identity = 115/129 (89.15%), Postives = 120/129 (93.02%), Query Frame = 1 

Query: 5   FVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHR 64
           FVEADNAEAII RIE KSRKIESLLKQ K VEALKTALEGSPP TRDERCKSANWIVVHR
Sbjct: 4   FVEADNAEAIIARIETKSRKIESLLKQYKHVEALKTALEGSPPKTRDERCKSANWIVVHR 63

Query: 65  ALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILR 124
           ALMAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTCDQCL+IHEKLTE+AGLGCILR
Sbjct: 64  ALMAIKDIDGMLNALDVEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILR 123

Query: 125 ALADTINTV 134
            L DTINTV
Sbjct: 124 CLTDTINTV 132

[Close]
BLAST of Cp4.1LG01g25630 vs. Swiss-Prot
Match: ARC5B_ARATH (Actin-related protein 2/3 complex subunit 5B OS=Arabidopsis thaliana GN=ARPC5B PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.1e-55
Identity = 105/130 (80.77%), Postives = 115/130 (88.46%), Query Frame = 1 

Query: 4   AFVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVH 63
           AFVEADNAE I+ RIE KS+KIESLLK  K VEALKTAL+GSPP T DERCKSANWIVVH
Sbjct: 6   AFVEADNAEEIMARIETKSQKIESLLKHYKHVEALKTALDGSPPKTLDERCKSANWIVVH 65

Query: 64  RALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCIL 123
           RA+MAIKD++GM +SL  EYYDILMKYLYRGLSTGD PTC+QCL IHEKLTE+AGLGCIL
Sbjct: 66  RAIMAIKDIEGMLNSLTAEYYDILMKYLYRGLSTGDEPTCEQCLMIHEKLTERAGLGCIL 125

Query: 124 RALADTINTV 134
           R L+DT NTV
Sbjct: 126 RCLSDTTNTV 135

[Close]
BLAST of Cp4.1LG01g25630 vs. Swiss-Prot
Match: ARPC5_HUMAN (Actin-related protein 2/3 complex subunit 5 OS=Homo sapiens GN=ARPC5 PE=1 SV=3)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09
Identity = 34/105 (32.38%), Postives = 56/105 (53.33%), Query Frame = 1 

Query: 24  KIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDP 83
           +++S L+Q     AL+ AL+  P NT+ +  K     +V + L++ K  D++    SLD 
Sbjct: 41  EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDK 100

Query: 84  EYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILRAL 127
              D+LMKY+Y+G  +    +    L+ HEK     G+G I+R L
Sbjct: 101 NGVDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVL 145

[Close]
BLAST of Cp4.1LG01g25630 vs. Swiss-Prot
Match: ARPC5_RAT (Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus GN=Arpc5 PE=1 SV=3)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09
Identity = 34/105 (32.38%), Postives = 56/105 (53.33%), Query Frame = 1 

Query: 24  KIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDP 83
           +++S L+Q     AL+ AL+  P NT+ +  K     +V + L++ K  D++    SLD 
Sbjct: 41  EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDK 100

Query: 84  EYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILRAL 127
              D+LMKY+Y+G  +    +    L+ HEK     G+G I+R L
Sbjct: 101 NGVDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVL 145

[Close]
BLAST of Cp4.1LG01g25630 vs. Swiss-Prot
Match: ARPC5_PONAB (Actin-related protein 2/3 complex subunit 5 OS=Pongo abelii GN=ARPC5 PE=2 SV=3)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09
Identity = 34/105 (32.38%), Postives = 56/105 (53.33%), Query Frame = 1 

Query: 24  KIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDP 83
           +++S L+Q     AL+ AL+  P NT+ +  K     +V + L++ K  D++    SLD 
Sbjct: 41  EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDK 100

Query: 84  EYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILRAL 127
              D+LMKY+Y+G  +    +    L+ HEK     G+G I+R L
Sbjct: 101 NGVDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVL 145

[Close]
BLAST of Cp4.1LG01g25630 vs. TrEMBL
Match: W9R3V7_9ROSA (Actin-related protein 2/3 complex subunit 5 OS=Morus notabilis GN=L484_021833 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.6e-66
Identity = 127/132 (96.21%), Postives = 131/132 (99.24%), Query Frame = 1 

Query: 2   SDAFVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIV 61
           +DAFVEADNAEAIITRIEHKSRKIESLLKQSK VEALKTALEGSPPNTRDERCKSANWIV
Sbjct: 4   TDAFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIV 63

Query: 62  VHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGC 121
           VHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTE+AGLGC
Sbjct: 64  VHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC 123

Query: 122 ILRALADTINTV 134
           ILR+LADT+NTV
Sbjct: 124 ILRSLADTVNTV 135

[Close]
BLAST of Cp4.1LG01g25630 vs. TrEMBL
Match: A0A0A0KD59_CUCSA (Actin-related protein 2/3 complex subunit 5 OS=Cucumis sativus GN=Csa_6G008040 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.1e-64
Identity = 124/129 (96.12%), Postives = 127/129 (98.45%), Query Frame = 1 

Query: 5   FVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHR 64
           FVEADNAEAIITRIEHKSRKIESLLKQ K VEALKTALEGSPPNTRDERCKSANWIVVHR
Sbjct: 7   FVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHR 66

Query: 65  ALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILR 124
           ALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTE+AGLGCILR
Sbjct: 67  ALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILR 126

Query: 125 ALADTINTV 134
           +LADT+NTV
Sbjct: 127 SLADTVNTV 135

[Close]
BLAST of Cp4.1LG01g25630 vs. TrEMBL
Match: A0A061DUG1_THECC (Actin-related protein 2/3 complex subunit 5 OS=Theobroma cacao GN=TCM_005690 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 3.3e-64
Identity = 123/131 (93.89%), Postives = 128/131 (97.71%), Query Frame = 1 

Query: 3   DAFVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVV 62
           + FVEADNAEAIITRIEHKSRKIESLLKQ+K VEALKTALEGSPP TRDERCKSANWIVV
Sbjct: 5   EKFVEADNAEAIITRIEHKSRKIESLLKQNKPVEALKTALEGSPPMTRDERCKSANWIVV 64

Query: 63  HRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCI 122
           HRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTE+AGLGCI
Sbjct: 65  HRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCI 124

Query: 123 LRALADTINTV 134
           LR+LADT+NTV
Sbjct: 125 LRSLADTVNTV 135

[Close]
BLAST of Cp4.1LG01g25630 vs. TrEMBL
Match: A5AQ06_VITVI (Actin-related protein 2/3 complex subunit 5 OS=Vitis vinifera GN=VIT_15s0021g01870 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.1e-63
Identity = 120/129 (93.02%), Postives = 126/129 (97.67%), Query Frame = 1 

Query: 5   FVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHR 64
           FVEADNAEAIITRIEHKSRKIESLLKQ K +EALKTALEGSPPNTRDERCKSANWIVVHR
Sbjct: 7   FVEADNAEAIITRIEHKSRKIESLLKQHKPIEALKTALEGSPPNTRDERCKSANWIVVHR 66

Query: 65  ALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILR 124
           A+MAIKDVD +FSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTE+AGLGCILR
Sbjct: 67  AMMAIKDVDSLFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILR 126

Query: 125 ALADTINTV 134
           +LADT+NTV
Sbjct: 127 SLADTVNTV 135

[Close]
BLAST of Cp4.1LG01g25630 vs. TrEMBL
Match: M5WAX3_PRUPE (Actin-related protein 2/3 complex subunit 5 OS=Prunus persica GN=PRUPE_ppa013215mg PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 2.8e-63
Identity = 121/132 (91.67%), Postives = 128/132 (96.97%), Query Frame = 1 

Query: 2   SDAFVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIV 61
           ++ FVEADNAEAIITRIE KSRKIESLLKQ K VEALKTALEGSPPNTRDERCKSANWI+
Sbjct: 4   TEEFVEADNAEAIITRIEQKSRKIESLLKQYKPVEALKTALEGSPPNTRDERCKSANWIM 63

Query: 62  VHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGC 121
           VHRA+MAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTE+AGLGC
Sbjct: 64  VHRAIMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC 123

Query: 122 ILRALADTINTV 134
           ILR+LADT+NTV
Sbjct: 124 ILRSLADTVNTV 135

[Close]
BLAST of Cp4.1LG01g25630 vs. TAIR10
Match: AT4G01710.1 (AT4G01710.1 ARP2/3 complex 16 kDa subunit (p16-Arc))

HSP 1 Score: 234.2 bits (596), Expect = 4.7e-62
Identity = 115/129 (89.15%), Postives = 120/129 (93.02%), Query Frame = 1 

Query: 5   FVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHR 64
           FVEADNAEAII RIE KSRKIESLLKQ K VEALKTALEGSPP TRDERCKSANWIVVHR
Sbjct: 4   FVEADNAEAIIARIETKSRKIESLLKQYKHVEALKTALEGSPPKTRDERCKSANWIVVHR 63

Query: 65  ALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILR 124
           ALMAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTCDQCL+IHEKLTE+AGLGCILR
Sbjct: 64  ALMAIKDIDGMLNALDVEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILR 123

Query: 125 ALADTINTV 134
            L DTINTV
Sbjct: 124 CLTDTINTV 132

[Close]
BLAST of Cp4.1LG01g25630 vs. TAIR10
Match: AT5G65274.1 (AT5G65274.1 ARP2/3 complex 16 kDa subunit (p16-Arc))

HSP 1 Score: 215.7 bits (548), Expect = 1.7e-56
Identity = 105/130 (80.77%), Postives = 115/130 (88.46%), Query Frame = 1 

Query: 4   AFVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVH 63
           AFVEADNAE I+ RIE KS+KIESLLK  K VEALKTAL+GSPP T DERCKSANWIVVH
Sbjct: 6   AFVEADNAEEIMARIETKSQKIESLLKHYKHVEALKTALDGSPPKTLDERCKSANWIVVH 65

Query: 64  RALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCIL 123
           RA+MAIKD++GM +SL  EYYDILMKYLYRGLSTGD PTC+QCL IHEKLTE+AGLGCIL
Sbjct: 66  RAIMAIKDIEGMLNSLTAEYYDILMKYLYRGLSTGDEPTCEQCLMIHEKLTERAGLGCIL 125

Query: 124 RALADTINTV 134
           R L+DT NTV
Sbjct: 126 RCLSDTTNTV 135

[Close]
BLAST of Cp4.1LG01g25630 vs. NCBI nr
Match: gi|703072505|ref|XP_010089302.1| (Actin-related protein 2/3 complex subunit 5 [Morus notabilis])

HSP 1 Score: 260.0 bits (663), Expect = 2.3e-66
Identity = 127/132 (96.21%), Postives = 131/132 (99.24%), Query Frame = 1 

Query: 2   SDAFVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIV 61
           +DAFVEADNAEAIITRIEHKSRKIESLLKQSK VEALKTALEGSPPNTRDERCKSANWIV
Sbjct: 4   TDAFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIV 63

Query: 62  VHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGC 121
           VHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTE+AGLGC
Sbjct: 64  VHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC 123

Query: 122 ILRALADTINTV 134
           ILR+LADT+NTV
Sbjct: 124 ILRSLADTVNTV 135

[Close]
BLAST of Cp4.1LG01g25630 vs. NCBI nr
Match: gi|659081508|ref|XP_008441367.1| (PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 2.5e-65
Identity = 126/129 (97.67%), Postives = 128/129 (99.22%), Query Frame = 1 

Query: 5   FVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHR 64
           FVEADNAEAIITRIEHKSRKIESLLKQSK VEALKTALEGSPPNTRDERCKSANWIVVHR
Sbjct: 7   FVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHR 66

Query: 65  ALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILR 124
           ALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTE+AGLGCILR
Sbjct: 67  ALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILR 126

Query: 125 ALADTINTV 134
           +LADTINTV
Sbjct: 127 SLADTINTV 135

[Close]
BLAST of Cp4.1LG01g25630 vs. NCBI nr
Match: gi|449441438|ref|XP_004138489.1| (PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis sativus])

HSP 1 Score: 253.8 bits (647), Expect = 1.6e-64
Identity = 124/129 (96.12%), Postives = 127/129 (98.45%), Query Frame = 1 

Query: 5   FVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVVHR 64
           FVEADNAEAIITRIEHKSRKIESLLKQ K VEALKTALEGSPPNTRDERCKSANWIVVHR
Sbjct: 7   FVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHR 66

Query: 65  ALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILR 124
           ALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTE+AGLGCILR
Sbjct: 67  ALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILR 126

Query: 125 ALADTINTV 134
           +LADT+NTV
Sbjct: 127 SLADTVNTV 135

[Close]
BLAST of Cp4.1LG01g25630 vs. NCBI nr
Match: gi|720009008|ref|XP_010258802.1| (PREDICTED: actin-related protein 2/3 complex subunit 5A isoform X2 [Nelumbo nucifera])

HSP 1 Score: 253.4 bits (646), Expect = 2.1e-64
Identity = 123/131 (93.89%), Postives = 128/131 (97.71%), Query Frame = 1 

Query: 3   DAFVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVV 62
           + FVEADNAEAIITRIEHKSRKIESLLKQSK VEALKTALEGSPP TRDERCKSANWIVV
Sbjct: 5   EEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPKTRDERCKSANWIVV 64

Query: 63  HRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCI 122
           HRA+MAIKDVDGMFSSLDPEYYDILMKYLYRGL+TGDRPTCDQCLRIHEKLTE+AGLGCI
Sbjct: 65  HRAIMAIKDVDGMFSSLDPEYYDILMKYLYRGLATGDRPTCDQCLRIHEKLTERAGLGCI 124

Query: 123 LRALADTINTV 134
           LRALADT+NTV
Sbjct: 125 LRALADTVNTV 135

[Close]
BLAST of Cp4.1LG01g25630 vs. NCBI nr
Match: gi|1000981787|ref|XP_002511607.2| (PREDICTED: actin-related protein 2/3 complex subunit 5A [Ricinus communis])

HSP 1 Score: 253.4 bits (646), Expect = 2.1e-64
Identity = 124/131 (94.66%), Postives = 128/131 (97.71%), Query Frame = 1 

Query: 3   DAFVEADNAEAIITRIEHKSRKIESLLKQSKTVEALKTALEGSPPNTRDERCKSANWIVV 62
           + FVEA+NAEAIITRIEHKSRKIESLLKQ K VEALKTALEGSPPNTRDERCKSANWIVV
Sbjct: 5   EEFVEAENAEAIITRIEHKSRKIESLLKQYKPVEALKTALEGSPPNTRDERCKSANWIVV 64

Query: 63  HRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCI 122
           HRA+MAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCI
Sbjct: 65  HRAIMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCI 124

Query: 123 LRALADTINTV 134
           LRALADT+NTV
Sbjct: 125 LRALADTMNTV 135

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g25630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARC5A_ARATH8.3e-6189.15Actin-related protein 2/3 complex subunit 5A OS=Arabidopsis thaliana GN=ARPC5A P... [more]
ARC5B_ARATH3.1e-5580.77Actin-related protein 2/3 complex subunit 5B OS=Arabidopsis thaliana GN=ARPC5B P... [more]
ARPC5_HUMAN1.5e-0932.38Actin-related protein 2/3 complex subunit 5 OS=Homo sapiens GN=ARPC5 PE=1 SV=3[more]
ARPC5_RAT1.5e-0932.38Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus GN=Arpc5 PE=1 S... [more]
ARPC5_PONAB1.5e-0932.38Actin-related protein 2/3 complex subunit 5 OS=Pongo abelii GN=ARPC5 PE=2 SV=3[more]
BLAST of Cp4.1LG01g25630 vs. TrEMBL
Match NameE-valueIdentityDescription
W9R3V7_9ROSA1.6e-6696.21Actin-related protein 2/3 complex subunit 5 OS=Morus notabilis GN=L484_021833 PE... [more]
A0A0A0KD59_CUCSA1.1e-6496.12Actin-related protein 2/3 complex subunit 5 OS=Cucumis sativus GN=Csa_6G008040 P... [more]
A0A061DUG1_THECC3.3e-6493.89Actin-related protein 2/3 complex subunit 5 OS=Theobroma cacao GN=TCM_005690 PE=... [more]
A5AQ06_VITVI2.1e-6393.02Actin-related protein 2/3 complex subunit 5 OS=Vitis vinifera GN=VIT_15s0021g018... [more]
M5WAX3_PRUPE2.8e-6391.67Actin-related protein 2/3 complex subunit 5 OS=Prunus persica GN=PRUPE_ppa013215... [more]
BLAST of Cp4.1LG01g25630 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G01710.14.7e-6289.15 ARP2/3 complex 16 kDa subunit (p16-Arc)[more]
AT5G65274.11.7e-5680.77 ARP2/3 complex 16 kDa subunit (p16-Arc)[more]
BLAST of Cp4.1LG01g25630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|703072505|ref|XP_010089302.1|2.3e-6696.21Actin-related protein 2/3 complex subunit 5 [Morus notabilis][more]
gi|659081508|ref|XP_008441367.1|2.5e-6597.67PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis melo][more]
gi|449441438|ref|XP_004138489.1|1.6e-6496.12PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis sativus][more]
gi|720009008|ref|XP_010258802.1|2.1e-6493.89PREDICTED: actin-related protein 2/3 complex subunit 5A isoform X2 [Nelumbo nuci... [more]
gi|1000981787|ref|XP_002511607.2|2.1e-6494.66PREDICTED: actin-related protein 2/3 complex subunit 5A [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0030833regulation of actin filament polymerization
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: INTERPRO
TermDefinition
IPR006789ARPC5
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034314 Arp2/3 complex-mediated actin nucleation
biological_process GO:0030833 regulation of actin filament polymerization
cellular_component GO:0005885 Arp2/3 protein complex
cellular_component GO:0015629 actin cytoskeleton
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g25630.1Cp4.1LG01g25630.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006789Actin-related protein 2/3 complex subunit 5GENE3DG3DSA:1.25.40.190coord: 4..129
score: 4.6
IPR006789Actin-related protein 2/3 complex subunit 5PANTHERPTHR12644ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARCcoord: 3..133
score: 3.5
IPR006789Actin-related protein 2/3 complex subunit 5PFAMPF04699P16-Arccoord: 11..129
score: 2.2
IPR006789Actin-related protein 2/3 complex subunit 5unknownSSF69103Arp2/3 complex 16 kDa subunit ARPC5coord: 5..129
score: 9.68

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g25630CmaCh04G029710Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g25630CmoCh04G030890Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g25630Cla006524Watermelon (97103) v1cpewmB457
Cp4.1LG01g25630MELO3C008212Melon (DHL92) v3.5.1cpemeB398
Cp4.1LG01g25630ClCG11G006910Watermelon (Charleston Gray)cpewcgB366
Cp4.1LG01g25630Lsi03G003770Bottle gourd (USVL1VR-Ls)cpelsiB344
Cp4.1LG01g25630MELO3C008212.2Melon (DHL92) v3.6.1cpemedB463
Cp4.1LG01g25630Bhi04G001964Wax gourdcpewgoB0534
Cp4.1LG01g25630Carg06045Silver-seed gourdcarcpeB0034
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g25630Melon (DHL92) v3.6.1cpemedB465
Cp4.1LG01g25630Silver-seed gourdcarcpeB1408
Cp4.1LG01g25630Cucumber (Chinese Long) v3cpecucB0482
Cp4.1LG01g25630Wax gourdcpewgoB0525
Cp4.1LG01g25630Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG01g25630Cucumber (Gy14) v1cgycpeB0164
Cp4.1LG01g25630Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g25630Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g25630Wild cucumber (PI 183967)cpecpiB385
Cp4.1LG01g25630Cucumber (Chinese Long) v2cpecuB386
Cp4.1LG01g25630Bottle gourd (USVL1VR-Ls)cpelsiB339
Cp4.1LG01g25630Watermelon (Charleston Gray)cpewcgB355
Cp4.1LG01g25630Watermelon (97103) v1cpewmB461
Cp4.1LG01g25630Melon (DHL92) v3.5.1cpemeB400
Cp4.1LG01g25630Cucumber (Gy14) v2cgybcpeB214