Cp4.1LG01g23020 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g23020
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCLAVATA3/ESR (CLE)-related protein 25
LocationCp4.1LG01 : 19839919 .. 19843129 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGGTGGCGCGGTTCGTGGAGTGGACTAACTCTAAGACTCCACTGTAGGTCTATAGGCACAGGGCATATGACTTTGCCTCTTGCAGGTTGCAGTTCAACAGAGAAGCCAAGCTGACTGAGACGGACATCATGGAAAAATACAGTCTTGTAAAGGGGAAAATGGAAGGGATGGCGGATAAACCGTGCTGCTATCTCATCTATGATAGAGGAAAAACATTGGGAATTGATGAAGGAAGCTGTTAGGATCAACAAGTCCTACGCCAACCTGCTTACTTCGGACAGAATTCCAAATGTGAAAGTTCTACTGTCATAATTAAATTGGATCTAAACATGTGTATATGCATGCGTATGTAATACTCAATATGGCATGCCGAGGGAAAGAAGATATTTGAGAACATGTCAATACTTTATTCGCTTATAGTCTTCGACTTTTCATTATCCTTTAGTTTTGTTCTTCATTTTTTGGGATCCAGTAACAGTTCCACTGTATTTTCTTTGATCATATTTTCTTCTTTTTCAGTTTGCCACTTGCTAGTAGGACCACTGAGTAAAATTTTCCAGGATTCTAAGATGGAGTCGGTGGATTGGGAAGCCCTAATATTCACATCCATGAACGTGGGAGAGAGTCCTAAACATGCTCGGACCTCGTTTGCTCACATGAATGCAGAATCAATTTACAGTAATCAGAATTCTTGTAACCAGACATGCGAAGCTGCCTGCCTCATGAAATTACAAAGAAAATGGTTCTTAAGGGCATCAATCTACTTTGGTATTAGATACTTGTTTCTTAGTTGAATTGCTCTGATTTGCCTTCAGAATTGATTTGAGCCAGATTAGTTCATTGTGTACTGTGGGCTTGCGACAGCAGCGCATCTAAACAGATGGTAGTATTCATTTTTCATTGTTCTCTGATAGCAATTGCTTGTATGTTGTTTTCCAAAACAAGGTTTAAAATCAAGGGTTTCCTTGCAATAATTGGGCGCTGATCAACTACCAGACACTCAAAACCAACTGCCTCAATTTCTTCAGGTGAGCAATCATTTCTCTGATGACTATGTAACATTTGGCCTAATTGGGATTAACACTTTATCTTCTTCGCAAATTTTAGTCTAATATTTGGAGATTTGGCTATGCCTCGTCTTTACGAACCTGATGTTAAGTGCTCTGAGTTTATGAGATAGTGAGATCCCCCAATTCCCCTTTTGTAGCTATAGGAAAATGCAGAAACTAAGGCGAAGAAAAAGGAGCTGATGGACACATTCTTCCACAATAAAGTGACATAAATAACTACTTTTCTGCGTTTAAATCAGATTCCTTCTCTCTCTTCCCACGCGAACACAAAGTACAGTTTCACTGATACCGTCTTTATATACAAACAAAACAGCCTTACAACCCGCCAATACCTCAACCAACCGAATTAGTTTTCCATCTCTCTTCTTTCTTCTTTCTTAGTCTATAGTTATCCATCTTCACTTCCATGCCCTGAAAATGTCTGATTTTAGTCATTTCTGTGTTTCTGTTCTGAATGGATGATGACCATTGTTGGTCAATTGGAAGCTGTGAGTTTAGGAAAAAGGTTTGGGTGTAATGGAACCTAACTGTAGATTTTTTAGGCTTCTGTTTGGAGTTTTTCTCTTTCTTGGTATCATCTGGTTTTCTTTCATAGGAGGGATTGATAATGCTAGCCCAGCATCCAGAAGAGCGACAGACATGCAGTGGAAGGTGATTGGAAGCGAGAAGCATGTCTTTCATTGGCATTCTGATTCCTATTCTGTCAGCAAGAGAAGAGTACCAAATGGACCTGATCCAATCCATAACAGGTACGCAATTCTACTTGATCTAATATATTAAAATTGCAGATATGCTTGCTTATTTTCTTTTTCTTCTTCTCTTTGCAAGTATCTTCTGAACTATTCGTCTGTTCTCCTTCCTTTCTTTTATATTTTTTATCTCCTTAATTTTGTGGGTTTTGACGCTTTGGTGTAGAATTCTTTAAATTTTTGTCATCTTGAGGACAGAAAAATTTGACCATTGAATTTTGTCCCTAAAAAAAGGCAAATTAACGCGTCTGAAGGTGACCACCCTACTTCAATTAGAAGAAAGATAAGGAACTGAGAGTTCTATTACCATTAGTGAATTTAGGAACTGCTACTCTATTGCTCTCATCTTTTCCAATTGTCGTTATTAGTTTCCTTGTTTACTACAAAATTGTGAACAGAATTCATTCAAACCCCCACCATTTGATCATTTTAAAATAATGTATTGCTCTGCCTCTAACCAGTGTGCTTTCTTTTCTTTTTTTTTCATTGTTTGGTTTTAACAACTTGAGTTTGTTAAAGGGATGCAACAAACTATTTCAATTGAGAAGTGTTGATATTGGAGATAGTCTCACTTCTTTCCCCCCATAAAAGAAAAAAGAACAAAAGTTCTTTTTTATCACTCTTTCTCTTATTTTTATGAGCTGTTAAAGGCATTGGGGCAAGAACTTGACCACTTTAGTTCATAAGCTTGACAGATTACATAAAATTGTTTCTCTTTGCAACAAACCATTGCAGCATGATACTCTGTCTTTATGACATGGGCTGATGATTTTCTTTTTTTTTGCACAAAATGTGAATCTCAGGAGAGTGGAGAATTCCAAACAACCACCAGTTCGAGCCTAAGCAAATCAAGGAGATAGATCAGCTGCAGAAAAGGCTCAGAAATGAACAGTTAATTTTTTTTTTTTTACCTGTAAGTAAATGGTTTTTATTTTTATTTTTATGCTCTCCATCAAGGATAGATCCTACATTGAGACTTTTGTCCCCTAAAGCACTGACATGGCAACTGTTCTTAGTGGGTTTTTGGGGGTAAAGAGATTTTGGATAACTTTCCCAGAAAAATTTTCAGTTGTTAGTAGTCATCATTTATTCGATCTAAGATGCAAAGTTTTTGTTTTTCTCGGAATTTGAAGTTATTATATTTTGTTTCTTGTCGTTCACATGTATATGTATAACTTGAATTTTCCATTAATATCTTTGTTGTTTTTTTCCCATGCTTTTAGGCGACACATTCTTAAAAAGTGGAAAATGATTGATTCTTGTAATTGGTGATTTAAATAGTAAAAAGTGGCCTATAAACCTGCTCCAACTTTAATTGCTTATCCTTTATCTCGGAATTCCGCGTAAATCTTAATTAACTCATTTGTGAAATAAAGTGATGGAATATTTTT

mRNA sequence

GGGGTGGCGCGGTTCGTGGAGTGGACTAACTCTAAGACTCCACTGTAGGTCTATAGGCACAGGGCATATGACTTTGCCTCTTGCAGGTTGCAGTTCAACAGAGAAGCCAAGCTGACTGAGACGGACATCATGGAAAAATACAGTCTTGTAAAGGGGAAAATGGAAGGGATGGCGGATAAACCGTGCTGCTATCTCATCTATGATAGAGGAAAAACATTGGGAATTGATGAAGGAAGCTGTTAGGATCAACAAGTCCTACGCCAACCTGCTTACTTCGGACAGAATTCCAAATGTGAAAGTTCTACTGTCATAATTAAATTGGATCTAAACATGTGTATATGCATGCGTATGTAATACTCAATATGGCATGCCGAGGGAAAGAAGATATTTGAGAACATGTCAATACTTTATTCGCTTATAGTCTTCGACTTTTCATTATCCTTTAGTTTTGTTCTTCATTTTTTGGGATCCAGTAACAGTTCCACTGTATTTTCTTTGATCATATTTTCTTCTTTTTCAGTTTGCCACTTGCTAGTAGGACCACTGAGTAAAATTTTCCAGGATTCTAAGATGGAGTCGGTGGATTGGGAAGCCCTAATATTCACATCCATGAACGTGGGAGAGAGTCCTAAACATGCTCGGACCTCGTTTGCTCACATGAATGCAGAATCAATTTACAGTAATCAGAATTCTTGTAACCAGACATGCGAAGCTGCCTGCCTCATGAAATTACAAAGAAAATGGTTCTTAAGGGCATCAATCTACTTTGGTATTAGATACTTGTTTCTTAGTTGAATTGCTCTGATTTGCCTTCAGAATTGATTTGAGCCAGATTAGTTCATTGTGTACTGTGGGCTTGCGACAGCAGCGCATCTAAACAGATGGTAGTATTCATTTTTCATTGTTCTCTGATAGCAATTGCTTGTATGTTGTTTTCCAAAACAAGGTTTAAAATCAAGGGTTTCCTTGCAATAATTGGGCGCTGATCAACTACCAGACACTCAAAACCAACTGCCTCAATTTCTTCAGGTGAGCAATCATTTCTCTGATGACTATGTAACATTTGGCCTAATTGGGATTAACACTTTATCTTCTTCGCAAATTTTAGTCTAATATTTGGAGATTTGGCTATGCCTCGTCTTTACGAACCTGATGTTAAGTGCTCTGAGTTTATGAGATAGTGAGATCCCCCAATTCCCCTTTTGTAGCTATAGGAAAATGCAGAAACTAAGGCGAAGAAAAAGGAGCTGATGGACACATTCTTCCACAATAAAGTGACATAAATAACTACTTTTCTGCGTTTAAATCAGATTCCTTCTCTCTCTTCCCACGCGAACACAAAGTACAGTTTCACTGATACCGTCTTTATATACAAACAAAACAGCCTTACAACCCGCCAATACCTCAACCAACCGAATTAGTTTTCCATCTCTCTTCTTTCTTCTTTCTTAGTCTATAGTTATCCATCTTCACTTCCATGCCCTGAAAATGTCTGATTTTAGTCATTTCTGTGTTTCTGTTCTGAATGGATGATGACCATTGTTGGTCAATTGGAAGCTGTGAGTTTAGGAAAAAGGTTTGGGTGTAATGGAACCTAACTGTAGATTTTTTAGGCTTCTGTTTGGAGTTTTTCTCTTTCTTGGTATCATCTGGTTTTCTTTCATAGGAGGGATTGATAATGCTAGCCCAGCATCCAGAAGAGCGACAGACATGCAGTGGAAGGTGATTGGAAGCGAGAAGCATGTCTTTCATTGGCATTCTGATTCCTATTCTGTCAGCAAGAGAAGAGTACCAAATGGACCTGATCCAATCCATAACAGGAGAGTGGAGAATTCCAAACAACCACCAGTTCGAGCCTAAGCAAATCAAGGAGATAGATCAGCTGCAGAAAAGGCTCAGAAATGAACAGTTAATTTTTTTTTTTTTACCTGTAAGTAAATGGTTTTTATTTTTATTTTTATGCTCTCCATCAAGGATAGATCCTACATTGAGACTTTTGTCCCCTAAAGCACTGACATGGCAACTGTTCTTAGTGGGTTTTTGGGGGTAAAGAGATTTTGGATAACTTTCCCAGAAAAATTTTCAGTTGTTAGTAGTCATCATTTATTCGATCTAAGATGCAAAGTTTTTGTTTTTCTCGGAATTTGAAGTTATTATATTTTGTTTCTTGTCGTTCACATGTATATGTATAACTTGAATTTTCCATTAATATCTTTGTTGTTTTTTTCCCATGCTTTTAGGCGACACATTCTTAAAAAGTGGAAAATGATTGATTCTTGTAATTGGTGATTTAAATAGTAAAAAGTGGCCTATAAACCTGCTCCAACTTTAATTGCTTATCCTTTATCTCGGAATTCCGCGTAAATCTTAATTAACTCATTTGTGAAATAAAGTGATGGAATATTTTT

Coding sequence (CDS)

ATGGAACCTAACTGTAGATTTTTTAGGCTTCTGTTTGGAGTTTTTCTCTTTCTTGGTATCATCTGGTTTTCTTTCATAGGAGGGATTGATAATGCTAGCCCAGCATCCAGAAGAGCGACAGACATGCAGTGGAAGGTGATTGGAAGCGAGAAGCATGTCTTTCATTGGCATTCTGATTCCTATTCTGTCAGCAAGAGAAGAGTACCAAATGGACCTGATCCAATCCATAACAGGAGAGTGGAGAATTCCAAACAACCACCAGTTCGAGCCTAA

Protein sequence

MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDSYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
Homology
[Close]
BLAST of Cp4.1LG01g23020 vs. Swiss-Prot
Match: CLE25_ARATH (CLAVATA3/ESR (CLE)-related protein 25 OS=Arabidopsis thaliana GN=CLE25 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.0e-09
Identity = 33/80 (41.25%), Postives = 51/80 (63.75%), Query Frame = 1 

Query: 9  RLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQW-KVIGSEKHVFHWHSDSYSVSKRR 68
          R L GV   LG+I F  +G + N++P+   + +++  +  G + ++FH       VSKR+
Sbjct: 7  RALVGVIASLGLIVFLLVGILANSAPSVPSSENVKTLRFSGKDVNLFH-------VSKRK 66

Query: 69 VPNGPDPIHNRRVENSKQPP 88
          VPNGPDPIHNR+ E S++PP
Sbjct: 67 VPNGPDPIHNRKAETSRRPP 79

[Close]
BLAST of Cp4.1LG01g23020 vs. TrEMBL
Match: A0A0A0KS32_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633230 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.4e-36
Identity = 73/89 (82.02%), Postives = 77/89 (86.52%), Query Frame = 1 

Query: 1  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDS 60
          ME  C F + LFG FLFLGIIWFSFIG IDNAS ASRR TDMQWK+IG EKH FHWHSD 
Sbjct: 1  MESKCSFLKSLFGAFLFLGIIWFSFIGVIDNASLASRRETDMQWKLIGREKHFFHWHSDF 60

Query: 61 YSVSKRRVPNGPDPIHNRRVENSKQPPVR 90
          YSVSKRRVPNGPDPIHNRRVENS+QPP+R
Sbjct: 61 YSVSKRRVPNGPDPIHNRRVENSRQPPIR 89

[Close]
BLAST of Cp4.1LG01g23020 vs. TrEMBL
Match: M5WZX3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019332mg PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.2e-14
Identity = 44/93 (47.31%), Postives = 51/93 (54.84%), Query Frame = 1 

Query: 1  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQ------WKVIGSEKHVF 60
          ME + +  R LFG  L LG+ WF   G + N S      T         WK+IG EKH  
Sbjct: 1  MESDRKVLRTLFGALLLLGVFWFFLAGILVNRSTEKSTVTVSSTKMFKHWKLIGREKHAV 60

Query: 61 HWHSDSYSVSKRRVPNGPDPIHNRRVENSKQPP 88
           W S    VSKRRVPNGPDPIHNRR   ++QPP
Sbjct: 61 VWDSSFIYVSKRRVPNGPDPIHNRRAVKTRQPP 93

[Close]
BLAST of Cp4.1LG01g23020 vs. TrEMBL
Match: A0A061ELW4_THECC (Gb:AAC66597.1 OS=Theobroma cacao GN=TCM_018123 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.6e-12
Identity = 42/92 (45.65%), Postives = 55/92 (59.78%), Query Frame = 1 

Query: 6   RFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDM-------QWKVIGSEKHVFHWHS 65
           R  R LFGV L +G+IWF F+G I N + A  ++  +        W+ +  E++ FH   
Sbjct: 353 RALRSLFGVTLLVGVIWFFFVGIIANHATAMTKSMMVPSTRDFKHWEFVAQERYNFHQDF 412

Query: 66  DSYSVSKRRVPNGPDPIHNRRVENSKQPPVRA 91
               VSKRRVPNGPDPIHNRR   S++PP RA
Sbjct: 413 HLNYVSKRRVPNGPDPIHNRRAAKSREPPGRA 444

[Close]
BLAST of Cp4.1LG01g23020 vs. TrEMBL
Match: A0A067FYD1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034498mg PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 5.8e-12
Identity = 41/86 (47.67%), Postives = 48/86 (55.81%), Query Frame = 1 

Query: 9  RLLFGVFLFLGIIWFSFIGGIDNASPASRRAT-----DMQWKVIGSEKHVFHWHSDSYSV 68
          R L G  +FLG+IW  F G + N +  +            WK+I  EKH  H   D   V
Sbjct: 7  RFLIGAVIFLGVIWLLFAGILANHATKTTVTVPPTEISKHWKLIAREKHHAHQDMDLNYV 66

Query: 69 SKRRVPNGPDPIHNRRVENSKQPPVR 90
          SKRRVPNGPDPIHNRR   S+QPP R
Sbjct: 67 SKRRVPNGPDPIHNRRASKSRQPPGR 92

[Close]
BLAST of Cp4.1LG01g23020 vs. TrEMBL
Match: V7BZ59_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G023800g PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.9e-11
Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = 1 

Query: 4   NCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQ-----WKVIGSEKHVFHWHS 63
           +CR  RLL G  + LG+IWF F+   +N          M       K++  ++H  H +S
Sbjct: 19  SCR--RLLLGALVSLGVIWFVFLAISENRQTKRTVLVPMNVISKHLKLVSMQRHALHSNS 78

Query: 64  DSYSVSKRRVPNGPDPIHNRRVENSKQPPVRA 91
             + VSKRRVPNGPDPIHNRR   ++QPP +A
Sbjct: 79  RLFIVSKRRVPNGPDPIHNRRAVKTRQPPTQA 108

[Close]
BLAST of Cp4.1LG01g23020 vs. TAIR10
Match: AT3G28455.1 (AT3G28455.1 CLAVATA3/ESR-RELATED 25)

HSP 1 Score: 61.6 bits (148), Expect = 2.8e-10
Identity = 33/80 (41.25%), Postives = 51/80 (63.75%), Query Frame = 1 

Query: 9  RLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQW-KVIGSEKHVFHWHSDSYSVSKRR 68
          R L GV   LG+I F  +G + N++P+   + +++  +  G + ++FH       VSKR+
Sbjct: 7  RALVGVIASLGLIVFLLVGILANSAPSVPSSENVKTLRFSGKDVNLFH-------VSKRK 66

Query: 69 VPNGPDPIHNRRVENSKQPP 88
          VPNGPDPIHNR+ E S++PP
Sbjct: 67 VPNGPDPIHNRKAETSRRPP 79

[Close]
BLAST of Cp4.1LG01g23020 vs. NCBI nr
Match: gi|659117629|ref|XP_008458704.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Cucumis melo])

HSP 1 Score: 159.1 bits (401), Expect = 3.7e-36
Identity = 73/89 (82.02%), Postives = 77/89 (86.52%), Query Frame = 1 

Query: 1  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDS 60
          ME  C F + LFG FLFLGIIWFSFIG IDNAS ASRR TDMQWK+IG EKH FHWHSD 
Sbjct: 1  MESKCSFLKSLFGAFLFLGIIWFSFIGVIDNASLASRRETDMQWKLIGKEKHFFHWHSDF 60

Query: 61 YSVSKRRVPNGPDPIHNRRVENSKQPPVR 90
          YSVSKRRVPNGPDPIHNRRVENS+QPP+R
Sbjct: 61 YSVSKRRVPNGPDPIHNRRVENSRQPPIR 89

[Close]
BLAST of Cp4.1LG01g23020 vs. NCBI nr
Match: gi|700197248|gb|KGN52425.1| (hypothetical protein Csa_5G633230 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 4.8e-36
Identity = 73/89 (82.02%), Postives = 77/89 (86.52%), Query Frame = 1 

Query: 1  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDS 60
          ME  C F + LFG FLFLGIIWFSFIG IDNAS ASRR TDMQWK+IG EKH FHWHSD 
Sbjct: 1  MESKCSFLKSLFGAFLFLGIIWFSFIGVIDNASLASRRETDMQWKLIGREKHFFHWHSDF 60

Query: 61 YSVSKRRVPNGPDPIHNRRVENSKQPPVR 90
          YSVSKRRVPNGPDPIHNRRVENS+QPP+R
Sbjct: 61 YSVSKRRVPNGPDPIHNRRVENSRQPPIR 89

[Close]
BLAST of Cp4.1LG01g23020 vs. NCBI nr
Match: gi|645249317|ref|XP_008230697.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Prunus mume])

HSP 1 Score: 88.6 bits (218), Expect = 6.1e-15
Identity = 46/96 (47.92%), Postives = 53/96 (55.21%), Query Frame = 1 

Query: 1  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQ------WKVIGSEKHVF 60
          ME + +  R LFG  L LG+ WF   G + N S      T         WK+IG EKH  
Sbjct: 1  MESDRKVLRTLFGALLLLGVFWFFLAGILVNRSTEKSTVTVSSTKMFKHWKLIGREKHAV 60

Query: 61 HWHSDSYSVSKRRVPNGPDPIHNRRVENSKQPPVRA 91
           W S    VSKRRVPNGPDPIHNRR   ++QPP RA
Sbjct: 61 VWDSSFIYVSKRRVPNGPDPIHNRRAVKTRQPPTRA 96

[Close]
BLAST of Cp4.1LG01g23020 vs. NCBI nr
Match: gi|595971641|ref|XP_007217582.1| (hypothetical protein PRUPE_ppa019332mg [Prunus persica])

HSP 1 Score: 84.7 bits (208), Expect = 8.8e-14
Identity = 44/93 (47.31%), Postives = 51/93 (54.84%), Query Frame = 1 

Query: 1  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQ------WKVIGSEKHVF 60
          ME + +  R LFG  L LG+ WF   G + N S      T         WK+IG EKH  
Sbjct: 1  MESDRKVLRTLFGALLLLGVFWFFLAGILVNRSTEKSTVTVSSTKMFKHWKLIGREKHAV 60

Query: 61 HWHSDSYSVSKRRVPNGPDPIHNRRVENSKQPP 88
           W S    VSKRRVPNGPDPIHNRR   ++QPP
Sbjct: 61 VWDSSFIYVSKRRVPNGPDPIHNRRAVKTRQPP 93

[Close]
BLAST of Cp4.1LG01g23020 vs. NCBI nr
Match: gi|657974945|ref|XP_008379312.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Malus domestica])

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-13
Identity = 43/91 (47.25%), Postives = 51/91 (56.04%), Query Frame = 1 

Query: 6  RFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDM------QWKVIGSEKHVFHWHSD 65
          +  R +FG  L LG+ WF   G + N S      T         WK+IG EKH   W S 
Sbjct: 6  KVLRAMFGALLLLGVFWFFLAGILVNRSAEKPAVTVSPTEIFKHWKLIGREKHAVVWDST 65

Query: 66 SYSVSKRRVPNGPDPIHNRRVENSKQPPVRA 91
             VSKRRVPNGPDPIHNRR   ++QPP+RA
Sbjct: 66 FIYVSKRRVPNGPDPIHNRRAVKTRQPPMRA 96

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g23020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CLE25_ARATH5.0e-0941.25CLAVATA3/ESR (CLE)-related protein 25 OS=Arabidopsis thaliana GN=CLE25 PE=2 SV=1[more]
BLAST of Cp4.1LG01g23020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KS32_CUCSA3.4e-3682.02Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633230 PE=4 SV=1[more]
M5WZX3_PRUPE6.2e-1447.31Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019332mg PE=4 SV=1[more]
A0A061ELW4_THECC2.6e-1245.65Gb:AAC66597.1 OS=Theobroma cacao GN=TCM_018123 PE=4 SV=1[more]
A0A067FYD1_CITSI5.8e-1247.67Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034498mg PE=4 SV=1[more]
V7BZ59_PHAVU4.9e-1142.39Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G023800g PE=4 SV=1[more]
BLAST of Cp4.1LG01g23020 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G28455.12.8e-1041.25 CLAVATA3/ESR-RELATED 25[more]
BLAST of Cp4.1LG01g23020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659117629|ref|XP_008458704.1|3.7e-3682.02PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Cucumis melo][more]
gi|700197248|gb|KGN52425.1|4.8e-3682.02hypothetical protein Csa_5G633230 [Cucumis sativus][more]
gi|645249317|ref|XP_008230697.1|6.1e-1547.92PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Prunus mume][more]
gi|595971641|ref|XP_007217582.1|8.8e-1447.31hypothetical protein PRUPE_ppa019332mg [Prunus persica][more]
gi|657974945|ref|XP_008379312.1|2.6e-1347.25PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045168 cell-cell signaling involved in cell fate commitment
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g23020.1Cp4.1LG01g23020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34277FAMILY NOT NAMEDcoord: 6..90
score: 3.2
NoneNo IPR availablePANTHERPTHR34277:SF3CLAVATA3/ESR (CLE)-RELATED PROTEIN 25coord: 6..90
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g23020Cucsa.158640Cucumber (Gy14) v1cgycpeB0425
Cp4.1LG01g23020CmaCh15G002960Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g23020CmaCh04G027420Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g23020CmoCh04G028720Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g23020CmoCh15G003100Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g23020Cla010358Watermelon (97103) v1cpewmB381
Cp4.1LG01g23020Csa5G633230Cucumber (Chinese Long) v2cpecuB415
Cp4.1LG01g23020ClCG09G018520Watermelon (Charleston Gray)cpewcgB344
Cp4.1LG01g23020CSPI05G28630Wild cucumber (PI 183967)cpecpiB414
Cp4.1LG01g23020Lsi02G015150Bottle gourd (USVL1VR-Ls)cpelsiB336
Cp4.1LG01g23020CsaV3_5G037710Cucumber (Chinese Long) v3cpecucB0517
Cp4.1LG01g23020Bhi06G000381Wax gourdcpewgoB0502
Cp4.1LG01g23020CsGy5G027940Cucumber (Gy14) v2cgybcpeB625
Cp4.1LG01g23020Carg04406Silver-seed gourdcarcpeB0965
Cp4.1LG01g23020Carg02269Silver-seed gourdcarcpeB0374
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g23020Cp4.1LG13g08540Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g23020Melon (DHL92) v3.5.1cpemeB358
Cp4.1LG01g23020Cucumber (Gy14) v2cgybcpeB064
Cp4.1LG01g23020Cucumber (Gy14) v2cgybcpeB371
Cp4.1LG01g23020Melon (DHL92) v3.6.1cpemedB418
Cp4.1LG01g23020Melon (DHL92) v3.6.1cpemedB452
Cp4.1LG01g23020Silver-seed gourdcarcpeB0509
Cp4.1LG01g23020Cucumber (Chinese Long) v3cpecucB0475
Cp4.1LG01g23020Wax gourdcpewgoB0573
Cp4.1LG01g23020Cucurbita pepo (Zucchini)cpecpeB347