CmaCh04G027420 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCGGTGGATTGGAAAGCCCTAATATTCACATCCATGAACGTGGGAGAGAGTCCTAAACATGCAAGGACCTCGTATTCTCACATGAATGCAGAATCAATTTACAGTAATCAGAATTCTTGTAACCAGACATGCGAAGCTGCCTGCCTCATGAAATTACAAAGAAAATGGTTCTTATGGGCATCAATCTACTTTGGTATCAGATACTTGTTTCTTAGTTGAATTGCTTTGATTTTCCTTCAGTATTGATTTGAGCCAGATTAGTTCATTGTGTACTGTGGGCTTGCGACAGCAGCGCATCTAAACAAATGGTAGTATTCATTTTTCATTGTTCTCTGATAGCAAATCTAAACAAATGGTAGTATTCATTTTTCATTGTTCTCTGATAGCAATTGCTCGTATGTTTTTTTCCTAATCAAGGTTTAAAATCAAGGGTTTCCTTGCAATAATTGGTCGCTGATCAACTACCAGACACTCAAAACCAACTGCCTCAATTTTCTTCAGGTGAGCAATCATTTCTCTGATGACTATGTAACATTTGGCCTAATTGGGATTAACACTTTATCTTCTTCGCAAATTTTAGTTTAATATTCGGAGATTTGGCTATGCCTCGTCTTTACGAACCTGATGTTAAGTGCTCTGAGCTTATGAGATAGTGAGATCCCCCAATTCCCCTTTTGTAGATATAGGAAAATGCAGAAACTAAGGCGAAGAAAAAGGAGCTGATGGACACATTCTTCCACAATAAAGTGACATAAATAAATACTTTTCTGCGTTTAAATCAGATTCCATCTCTCTCTTCCCACGAGAACGCAAAGTACAGTTTCACTGATACCGTCTTTATATACAAACAAAACAGCCTTACAACCCGCCAATACCTCAGCCAACCGAATTAGTTTTCCATCTCTCTTCTTTCTTCTTTCTTAGTCTATAGTTATCCATCTTCACTTCCATGCCCTGAAAATGTCTGATTTTAGTCATTTCTGTGTTTCTGTTCTGAATGGATGATGACCATTGTTGGTCAATTGGAAGCTGTGAGTTTAGGAAAAAGGTTTGGGTGTAATGGAACCTAACTGTAGATTTTTTAGGCTTCTGTTTGGAGTTTTTCTCTTTCTTGGTATCATCTGGTTTTCTTTCATAGGAGGGATTGATAATGCTAGCCCAGCATCCAGAAGAGCGACAGACATGCAGTGGAAGGTGATTGGAAGCGAGAAGCATGTCTTTCATTGGCATTCTGATTTCTATTCTGTCAGCAAGAGAAGAGTACCAAATGGACCTGATCCAATCCATAACAGGTACGCAATTCTACTTGATCTAATATATTCAAATTGCAGATATGCTTGCTTATTTTCTTTTTCTTCTGCTCTTTGCAAGTATCTTCTGAACTATTCGTCTGTTCTCCTTCCTTTCTTTTATATTTTTTATCTCCTTCATTTTGTGGGTTTTGACGCTTTGGTGTAGAATTCTTGAAATTTTTGTCATCTTGAGGACAGAAATTTGACCATTGAATTTTGTCCCTAAAAAAAAGGCAAATTAACGCGTCTGAAGGTGACCACCCTACTTCAATTAAAAGAAAGATAAGGAACTGAGAGTTCTATTACCATTAGTGAATTTAGGAAGCTACTCTATTGCCTCTCATCTTTTCCAATTGTCTTTATTAGTTTCCTTGTTTACTACAAAATTGTGAACAGAATTCATTCAAACCCCCACCATTTGATCATTTTAAAATAGTGTATTGCTCTGCCTCTAACCAGTGTGCTTTCTTTTCTTTTTCTTTCATTGTTTGGTTTTAACAACTTGAGTTTGTTAAAGAGATGCAACAAACTATTCCAATTGAGAAGTGTTGATATTGGAGATTGTCTCACTTCTTTCCCCCCAAAAAAGAAAAAAGAACTTTTGTTCTTTTTTATCACTCTTTCTCTTATTTTTATGAGCTGTTAAAGGCATTGGGGCAAGAACTTGACCACTTTAGTTCATAAGCTTGACAGATTACATAAAATTGTTTCTCTTTGCAACAAAACCATTGCAGCATGATACTCTCTGTCTTTATGACATGGGCTGATGATTTTCCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCACAAAATGTGAATCTCAGGAGAGTGGAGAATTCTAAACAACCACCAGTTCGAGCCTAAGCAAATCAAGGAGATAGATCAGCTGCAGAAAAGGCTCAGAAATGAACAGTTAATTTTTTTTTACCTGTAAGTAAATGGTTTTTATTTTTATTTTTATGCTCTCCATCAAGGATAGATCCTGCATTGAGACTTTTGTCCCCTAAAGCACTGACATGGCAACTGTTCTTAGTGGGTTTTGGGGGGTAAAGAGATTTTGGATAACTTTCCCAGAAAAATTTTCAGTTGTTAGTAGTCATCATTTATTCGATCTAAGGTGCAAAGTTTTTGTTTTTCTCGGAATTTGAAGTTATTATATTTTGTTTCTTGTCGTTCACATGTATATGTGTAACTTGAATTTTCCATTAATATCTTTGTTGTTTTTTTCCCATGCTTTTAGGCGACACATTCTTAAAAAGTGGAAAATGATTGATTCTTGTAATTGGTGATTTAAATAGTAAAAAGTGGCCTATAAACCTGCTCCA ATGGAGTCGGTGGATTGGAAAGCCCTAATATTCACATCCATGAACGTGGGAGAGAGTCCTAAACATGCAAGGACCTCGTATTCTCACATGAATGCAGAATCAATTTACAGTAATCAGAATTCTTGTAACCAGACATGCGAAGCTGCCTGCCTCATGAAATTACAAAGAAAATGGTTCTTATGGGCATCAATCTACTTTGACACTCAAAACCAACTGCCTCAATTTTCTTCAGGAGGGATTGATAATGCTAGCCCAGCATCCAGAAGAGCGACAGACATGCAGTGGAAGGTGATTGGAAGCGAGAAGCATGTCTTTCATTGGCATTCTGATTTCTATTCTGTCAGCAAGAGAAGAGTACCAAATGGACCTGATCCAATCCATAACAGGAGAGTGGAGAATTCTAAACAACCACCAGTTCGAGCCTAAGCAAATCAAGGAGATAGATCAGCTGCAGAAAAGGCTCAGAAATGAACAGTTAATTTTTTTTTACCTGTAAGTAAATGGTTTTTATTTTTATTTTTATGCTCTCCATCAAGGATAGATCCTGCATTGAGACTTTTGTCCCCTAAAGCACTGACATGGCAACTGTTCTTAGTGGGTTTTGGGGGGTAAAGAGATTTTGGATAACTTTCCCAGAAAAATTTTCAGTTGTTAGTAGTCATCATTTATTCGATCTAAGGTGCAAAGTTTTTGTTTTTCTCGGAATTTGAAGTTATTATATTTTGTTTCTTGTCGTTCACATGTATATGTGTAACTTGAATTTTCCATTAATATCTTTGTTGTTTTTTTCCCATGCTTTTAGGCGACACATTCTTAAAAAGTGGAAAATGATTGATTCTTGTAATTGGTGATTTAAATAGTAAAAAGTGGCCTATAAACCTGCTCCA ATGGAGTCGGTGGATTGGAAAGCCCTAATATTCACATCCATGAACGTGGGAGAGAGTCCTAAACATGCAAGGACCTCGTATTCTCACATGAATGCAGAATCAATTTACAGTAATCAGAATTCTTGTAACCAGACATGCGAAGCTGCCTGCCTCATGAAATTACAAAGAAAATGGTTCTTATGGGCATCAATCTACTTTGACACTCAAAACCAACTGCCTCAATTTTCTTCAGGAGGGATTGATAATGCTAGCCCAGCATCCAGAAGAGCGACAGACATGCAGTGGAAGGTGATTGGAAGCGAGAAGCATGTCTTTCATTGGCATTCTGATTTCTATTCTGTCAGCAAGAGAAGAGTACCAAATGGACCTGATCCAATCCATAACAGGAGAGTGGAGAATTCTAAACAACCACCAGTTCGAGCCTAA MESVDWKALIFTSMNVGESPKHARTSYSHMNAESIYSNQNSCNQTCEAACLMKLQRKWFLWASIYFDTQNQLPQFSSGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
BLAST of CmaCh04G027420 vs. TrEMBL
Match: A0A0A0KS32_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633230 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 5.5e-25 Identity = 55/63 (87.30%), Postives = 58/63 (92.06%), Query Frame = 1
BLAST of CmaCh04G027420 vs. TrEMBL
Match: M5WZX3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019332mg PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.2e-09 Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 1
BLAST of CmaCh04G027420 vs. TrEMBL
Match: A0A067FYD1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034498mg PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 7.9e-08 Identity = 30/46 (65.22%), Postives = 32/46 (69.57%), Query Frame = 1
BLAST of CmaCh04G027420 vs. TrEMBL
Match: A0A067LAE6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09685 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.1e-07 Identity = 28/47 (59.57%), Postives = 32/47 (68.09%), Query Frame = 1
BLAST of CmaCh04G027420 vs. TrEMBL
Match: B9HU81_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s04900g PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 8.7e-07 Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 1
BLAST of CmaCh04G027420 vs. TAIR10
Match: AT3G28455.1 (AT3G28455.1 CLAVATA3/ESR-RELATED 25) HSP 1 Score: 49.3 bits (116), Expect = 2.3e-06 Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 1
BLAST of CmaCh04G027420 vs. NCBI nr
Match: gi|659117629|ref|XP_008458704.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Cucumis melo]) HSP 1 Score: 122.5 bits (306), Expect = 6.0e-25 Identity = 55/63 (87.30%), Postives = 58/63 (92.06%), Query Frame = 1
BLAST of CmaCh04G027420 vs. NCBI nr
Match: gi|700197248|gb|KGN52425.1| (hypothetical protein Csa_5G633230 [Cucumis sativus]) HSP 1 Score: 122.1 bits (305), Expect = 7.8e-25 Identity = 55/63 (87.30%), Postives = 58/63 (92.06%), Query Frame = 1
BLAST of CmaCh04G027420 vs. NCBI nr
Match: gi|657974945|ref|XP_008379312.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Malus domestica]) HSP 1 Score: 74.7 bits (182), Expect = 1.4e-10 Identity = 39/84 (46.43%), Postives = 45/84 (53.57%), Query Frame = 1
BLAST of CmaCh04G027420 vs. NCBI nr
Match: gi|645249317|ref|XP_008230697.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Prunus mume]) HSP 1 Score: 72.8 bits (177), Expect = 5.4e-10 Identity = 32/47 (68.09%), Postives = 35/47 (74.47%), Query Frame = 1
BLAST of CmaCh04G027420 vs. NCBI nr
Match: gi|658012485|ref|XP_008341510.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 25-like [Malus domestica]) HSP 1 Score: 72.4 bits (176), Expect = 7.1e-10 Identity = 32/47 (68.09%), Postives = 35/47 (74.47%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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