Cp4.1LG01g15290 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g15290
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG01 : 9181544 .. 9182044 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGACCTTCAACAGCAGCAGCAGCAGCAGCAGCAGCCGGCTTTGGTTTATCCCAACACTGCCGCCGTTGGCAGCCAACCGCCTCCTTCCCACCACTCCAACGGCTCATTCGGGGCAGTTTTTATAGTTCTTGCTGTTATTCTTGTCATATCCACTGTTGCTTGCTTCCTTGGCCGACTCTGCAACCGGCGAGCTGAAAACCAGAGGGCGAAGCCGGAGAAAACCCACGGCGGCGCTCGTCCCAGAGGGAAAGAACCCAAATTGCATCCTGACAAAGAAGGAGACATCGAATTTGGATTGGATTTGAGAAACCCAAATGGGAAAGGCAAAGCCCCATCTGGTGGAAATGGAGGAACCAAAGGCAACGGCCATGGGCCTAATGGGCCTAATGGCCATAGCCATGGGTTCAAACCCTTCGAAAATGGCCAAATCAAGCACGCGGATGATGATCATCATGAAGGGGATTTCAAGTTCAAAGCAGCAGCTCATCCGGTTTGA

mRNA sequence

ATGTCGGACCTTCAACAGCAGCAGCAGCAGCAGCAGCAGCCGGCTTTGGTTTATCCCAACACTGCCGCCGTTGGCAGCCAACCGCCTCCTTCCCACCACTCCAACGGCTCATTCGGGGCAGTTTTTATAGTTCTTGCTGTTATTCTTGTCATATCCACTGTTGCTTGCTTCCTTGGCCGACTCTGCAACCGGCGAGCTGAAAACCAGAGGGCGAAGCCGGAGAAAACCCACGGCGGCGCTCGTCCCAGAGGGAAAGAACCCAAATTGCATCCTGACAAAGAAGGAGACATCGAATTTGGATTGGATTTGAGAAACCCAAATGGGAAAGGCAAAGCCCCATCTGGTGGAAATGGAGGAACCAAAGGCAACGGCCATGGGCCTAATGGGCCTAATGGCCATAGCCATGGGTTCAAACCCTTCGAAAATGGCCAAATCAAGCACGCGGATGATGATCATCATGAAGGGGATTTCAAGTTCAAAGCAGCAGCTCATCCGGTTTGA

Coding sequence (CDS)

ATGTCGGACCTTCAACAGCAGCAGCAGCAGCAGCAGCAGCCGGCTTTGGTTTATCCCAACACTGCCGCCGTTGGCAGCCAACCGCCTCCTTCCCACCACTCCAACGGCTCATTCGGGGCAGTTTTTATAGTTCTTGCTGTTATTCTTGTCATATCCACTGTTGCTTGCTTCCTTGGCCGACTCTGCAACCGGCGAGCTGAAAACCAGAGGGCGAAGCCGGAGAAAACCCACGGCGGCGCTCGTCCCAGAGGGAAAGAACCCAAATTGCATCCTGACAAAGAAGGAGACATCGAATTTGGATTGGATTTGAGAAACCCAAATGGGAAAGGCAAAGCCCCATCTGGTGGAAATGGAGGAACCAAAGGCAACGGCCATGGGCCTAATGGGCCTAATGGCCATAGCCATGGGTTCAAACCCTTCGAAAATGGCCAAATCAAGCACGCGGATGATGATCATCATGAAGGGGATTTCAAGTTCAAAGCAGCAGCTCATCCGGTTTGA

Protein sequence

MSDLQQQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGLDLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFENGQIKHADDDHHEGDFKFKAAAHPV
Homology
[Close]
BLAST of Cp4.1LG01g15290 vs. TrEMBL
Match: A0A0A0KTP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G601520 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.9e-57
Identity = 137/189 (72.49%), Postives = 146/189 (77.25%), Query Frame = 1 

Query: 1   MSDLQQQQ----QQQQQPALVYPNTAAV--GSQPPPSHHSNGSFGAVFIVLAVILVISTV 60
           MS+LQQQQ    QQQQQPA VYP+TAA   GSQ PP HHSNGSFGAVFIVLAVI+VIS +
Sbjct: 1   MSELQQQQPQRQQQQQQPAYVYPDTAATSAGSQVPPPHHSNGSFGAVFIVLAVIVVISAL 60

Query: 61  ACFLGRLCNRRAEN-QRAKPEKTHGGARP-RGKEPKLHPDKEGDIEFGLDLRNPNGKGKA 120
           ACFLGRLCNRR EN QR KPEK+H GARP RGKEPKLHPDKEGDIEFG DLRNP+GKGK 
Sbjct: 61  ACFLGRLCNRRVENHQRPKPEKSHSGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKGKF 120

Query: 121 PSGGNGGT---------KGNGHGP---NGPNGHSHGFKPFENG-----QIKHADDDHHEG 165
           PSGGNG T         KGNG+GP   NGPNGH + FKPFENG     +IKH   DHHEG
Sbjct: 121 PSGGNGSTGNGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHT--DHHEG 180

[Close]
BLAST of Cp4.1LG01g15290 vs. TrEMBL
Match: E5GBJ1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.1e-56
Identity = 132/180 (73.33%), Postives = 140/180 (77.78%), Query Frame = 1 

Query: 5   QQQQQQQQQPALVYPNTAAV--GSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLC 64
           QQQQQQQQQPA VYP+TAA   GSQ PPSHHSNGSFGAVFIVLAVI+VIS +ACFLGRLC
Sbjct: 12  QQQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLC 71

Query: 65  NRRAEN-QRAKPEKTHGGARP-RGKEPKLHPDKEGDIEFGLDLRNPNGKGKAPSGGNGG- 124
           NRR EN QR KPEK+H GARP RGKEPKLHPDKEGDIEFG DLRNP+GKGK P GGNG  
Sbjct: 72  NRRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKGKFPPGGNGNG 131

Query: 125 -------TKGNGHGP---NGPNGHSHGFKPFENG-----QIKHADDDHHEGDFKFKAAAH 165
                   KGNG+GP   NGPNGH + FKPFENG     +IKH   DHHEGDF FKA  H
Sbjct: 132 NGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHT--DHHEGDFNFKAGGH 189

[Close]
BLAST of Cp4.1LG01g15290 vs. TrEMBL
Match: A0A0S3R266_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G239500 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-17
Identity = 69/154 (44.81%), Postives = 88/154 (57.14%), Query Frame = 1 

Query: 8   QQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAE 67
           Q Q QQP  VYP      +QPP SHHSNGSFGAVFIVLA+ILVIS VAC LGRLCN+R  
Sbjct: 4   QDQPQQPVQVYPT-----NQPPSSHHSNGSFGAVFIVLAIILVISVVACVLGRLCNKRYN 63

Query: 68  NQRAKPEKTHGGARPRGKEPKLH---PDKEGDIEFGLDLRNPNGKGKAPSGGNGGTKGNG 127
           +  +   +      P+   P++H   P  EGDIEFG+D R P    +    G G   G+G
Sbjct: 64  SHSSSSSQ----RAPKQHRPQVHDLRPRDEGDIEFGVDKRMPPPIIRTKVQGQGHGHGHG 123

Query: 128 HGPNGPNGHSHGFKPFENGQIKHADDDHHEGDFK 159
           HG +G +GH         G  +H +D+  E + +
Sbjct: 124 HGHHGHHGHG-----ASTGPHRHVNDNMKEFEMR 143

[Close]
BLAST of Cp4.1LG01g15290 vs. TrEMBL
Match: A0A0L9TM30_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g120800 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-17
Identity = 69/154 (44.81%), Postives = 88/154 (57.14%), Query Frame = 1 

Query: 8   QQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAE 67
           Q Q QQP  VYP      +QPP SHHSNGSFGAVFIVLA+ILVIS VAC LGRLCN+R  
Sbjct: 4   QDQPQQPVQVYPT-----NQPPSSHHSNGSFGAVFIVLAIILVISVVACVLGRLCNKRYN 63

Query: 68  NQRAKPEKTHGGARPRGKEPKLH---PDKEGDIEFGLDLRNPNGKGKAPSGGNGGTKGNG 127
           +  +   +      P+   P++H   P  EGDIEFG+D R P    +    G G   G+G
Sbjct: 64  SHSSSSSQ----RAPKQHRPQVHDLRPRDEGDIEFGVDKRMPPPIIRTKVQGQGHGHGHG 123

Query: 128 HGPNGPNGHSHGFKPFENGQIKHADDDHHEGDFK 159
           HG +G +GH         G  +H +D+  E + +
Sbjct: 124 HGHHGHHGHG-----ASTGPHRHVNDNMKEFEMR 143

[Close]
BLAST of Cp4.1LG01g15290 vs. TrEMBL
Match: A0A067JUS6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17751 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-16
Identity = 72/162 (44.44%), Postives = 86/162 (53.09%), Query Frame = 1 

Query: 9   QQQQQPALVYPNTAAVGSQPPPSH-HSNGSFGAVFIVLAVILVISTVACFLGRLCNRRA- 68
           Q QQQP +VYPNT  VG  PP S+ HSNGSFG VFIVLAVI+VIS +AC LGRLC RR  
Sbjct: 4   QPQQQPVVVYPNTV-VGQPPPASNSHSNGSFGTVFIVLAVIIVISAIACCLGRLCKRRQA 63

Query: 69  -----ENQRAKPEKTHGGARP------RGKEPKLHPDKEGDIEFGLDLRNPNGKGKAPSG 128
                  Q  KP        P      RG+E +   ++EGD+EFG D   P G+      
Sbjct: 64  AAGGNHKQGNKPNNKQSQQNPNFRPKERGREREREREREGDVEFGFDKGFPVGRSTGNGD 123

Query: 129 G-------NGGTKGNGHGPNGPNGHSHGFK----PFENGQIK 147
           G       NG    NGHG    +GH H  K      ++GQ+K
Sbjct: 124 GRGHKLSENGHNNINGHGHGHGHGHGHHMKGESYSVDDGQLK 164

[Close]
BLAST of Cp4.1LG01g15290 vs. TAIR10
Match: AT1G23530.1 (AT1G23530.1 unknown protein)

HSP 1 Score: 68.6 bits (166), Expect = 4.3e-12
Identity = 67/181 (37.02%), Postives = 90/181 (49.72%), Query Frame = 1 

Query: 6   QQQQQQQQPALVYPNT-----AAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGR 65
           Q  QQ QQP +VYPN          ++P  S  S+G+FG VFIVLAVI V+S +AC  GR
Sbjct: 4   QGVQQMQQPIVVYPNAYNKQYPDPSTKPSSSSGSSGNFGTVFIVLAVIFVLSALACVFGR 63

Query: 66  LCNRR---AENQRAKPEKTHGGARPRGKE---PKLHPDKEGDIEFGLDLRNPNGKGKAPS 125
           LCNR    A+ Q +K  K    +  + +E    +  P + GD++FG D++ P    K PS
Sbjct: 64  LCNRESRAAKQQHSKHPKHEKASSKKSREIRPVEREPRERGDMDFGFDMKRPEPIEK-PS 123

Query: 126 GGNGGTK----------------GNGHGPNGPN-GHSHGFKPFENGQIKHADDDHHEGDF 159
           G +GG                  G G GP  PN  H+  FK  ENG      D H +G+ 
Sbjct: 124 GRDGGEDIEFGFDNKRGERGREGGGGGGPPPPNIKHAVRFKLPENG------DHHSKGEI 177

[Close]
BLAST of Cp4.1LG01g15290 vs. TAIR10
Match: AT1G70470.1 (AT1G70470.1 unknown protein)

HSP 1 Score: 64.7 bits (156), Expect = 6.2e-11
Identity = 57/148 (38.51%), Postives = 76/148 (51.35%), Query Frame = 1 

Query: 7   QQQQQQQPALVYPNTAAVGSQP--PPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNR 66
           Q Q+ QQP  VYP+T++  S    P S  S+GSFG  FIVLA ILV++ +AC  GRLCNR
Sbjct: 4   QPQEFQQPQ-VYPSTSSSTSSSFSPSSSGSSGSFGTAFIVLAAILVLAALACVFGRLCNR 63

Query: 67  -------RAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGLDLRNPNGKGKAPSGGN 126
                  +  N+ +K EK         +  +  P + GD+EFG D++ P    K P+G N
Sbjct: 64  GGKQHKDKNNNKASKHEKPSSKKSREIRPVEREPRERGDVEFGFDMKRPGPMSK-PTGRN 123

Query: 127 GG------TKGNGHGPNGPNGHSHGFKP 140
           GG          G G  G  G   G +P
Sbjct: 124 GGDIEFGFDNKRGGGGGGGGGGKGGKRP 149

[Close]
BLAST of Cp4.1LG01g15290 vs. NCBI nr
Match: gi|778705033|ref|XP_011655621.1| (PREDICTED: uncharacterized protein LOC105435563 [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 4.1e-57
Identity = 137/189 (72.49%), Postives = 146/189 (77.25%), Query Frame = 1 

Query: 1   MSDLQQQQ----QQQQQPALVYPNTAAV--GSQPPPSHHSNGSFGAVFIVLAVILVISTV 60
           MS+LQQQQ    QQQQQPA VYP+TAA   GSQ PP HHSNGSFGAVFIVLAVI+VIS +
Sbjct: 1   MSELQQQQPQRQQQQQQPAYVYPDTAATSAGSQVPPPHHSNGSFGAVFIVLAVIVVISAL 60

Query: 61  ACFLGRLCNRRAEN-QRAKPEKTHGGARP-RGKEPKLHPDKEGDIEFGLDLRNPNGKGKA 120
           ACFLGRLCNRR EN QR KPEK+H GARP RGKEPKLHPDKEGDIEFG DLRNP+GKGK 
Sbjct: 61  ACFLGRLCNRRVENHQRPKPEKSHSGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKGKF 120

Query: 121 PSGGNGGT---------KGNGHGP---NGPNGHSHGFKPFENG-----QIKHADDDHHEG 165
           PSGGNG T         KGNG+GP   NGPNGH + FKPFENG     +IKH   DHHEG
Sbjct: 121 PSGGNGSTGNGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHT--DHHEG 180

[Close]
BLAST of Cp4.1LG01g15290 vs. NCBI nr
Match: gi|659090788|ref|XP_008446202.1| (PREDICTED: putative mediator of RNA polymerase II transcription subunit 19 [Cucumis melo])

HSP 1 Score: 225.7 bits (574), Expect = 5.9e-56
Identity = 132/180 (73.33%), Postives = 140/180 (77.78%), Query Frame = 1 

Query: 5   QQQQQQQQQPALVYPNTAAV--GSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLC 64
           QQQQQQQQQPA VYP+TAA   GSQ PPSHHSNGSFGAVFIVLAVI+VIS +ACFLGRLC
Sbjct: 12  QQQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLC 71

Query: 65  NRRAEN-QRAKPEKTHGGARP-RGKEPKLHPDKEGDIEFGLDLRNPNGKGKAPSGGNGG- 124
           NRR EN QR KPEK+H GARP RGKEPKLHPDKEGDIEFG DLRNP+GKGK P GGNG  
Sbjct: 72  NRRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKGKFPPGGNGNG 131

Query: 125 -------TKGNGHGP---NGPNGHSHGFKPFENG-----QIKHADDDHHEGDFKFKAAAH 165
                   KGNG+GP   NGPNGH + FKPFENG     +IKH   DHHEGDF FKA  H
Sbjct: 132 NGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHT--DHHEGDFNFKAGGH 189

[Close]
BLAST of Cp4.1LG01g15290 vs. NCBI nr
Match: gi|1009153616|ref|XP_015894729.1| (PREDICTED: uncharacterized protein LOC107428674 [Ziziphus jujuba])

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-22
Identity = 79/157 (50.32%), Postives = 89/157 (56.69%), Query Frame = 1 

Query: 5   QQQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNR 64
           Q Q QQQQQP LVYPNT  V  QPP SHHSNGSFG VFIVLA+I+VIS +ACFLGRLCNR
Sbjct: 15  QPQPQQQQQPVLVYPNT--VTKQPPNSHHSNGSFGTVFIVLAIIVVISAIACFLGRLCNR 74

Query: 65  RAENQRAKPEKTHGGARPRGKE-------------PKLHP------------DKEGDIEF 124
           RA N   KP K    A+  G E             PK  P             KEGD+EF
Sbjct: 75  RAHNSNPKPPKQSSRAKEGGSEGGNGKNNHHNKIRPKERPGSEFGSGTNGFRQKEGDLEF 134

Query: 125 GLDLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHG 137
           GLD+R+       PSG    ++G+GH  NG    S G
Sbjct: 135 GLDMRS------KPSGFRSDSRGHGHAGNGFRSGSRG 163

[Close]
BLAST of Cp4.1LG01g15290 vs. NCBI nr
Match: gi|645230198|ref|XP_008221824.1| (PREDICTED: uncharacterized protein LOC103321770 [Prunus mume])

HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18
Identity = 70/143 (48.95%), Postives = 78/143 (54.55%), Query Frame = 1 

Query: 8   QQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAE 67
           Q QQQQPALVYPN   V  QP  SHHSNGSFG VFIVLAVI+VIS +ACFLGRLCNRR  
Sbjct: 5   QPQQQQPALVYPNN--VRGQPSSSHHSNGSFGTVFIVLAVIVVISAIACFLGRLCNRRLH 64

Query: 68  NQRAKPEKTHGGARPRGKE---------------PKLHPDKEGDIEFGLDLRNPNGKGKA 127
           N +   +  H   RP  KE               P     K+ DIEFG D + PNG G  
Sbjct: 65  NSKPNKQPAH-NLRPSKKEAVVDHNHMEFGNNNNPSFRAPKDADIEFGFDKKIPNGNGSR 124

Query: 128 PSGGNGGTKGNGHGPNGPNGHSH 136
               + G   N   P+  NG  H
Sbjct: 125 SE--SRGYMNNHSKPHHGNGDHH 142

[Close]
BLAST of Cp4.1LG01g15290 vs. NCBI nr
Match: gi|657995478|ref|XP_008390077.1| (PREDICTED: uncharacterized protein LOC103452360 [Malus domestica])

HSP 1 Score: 98.2 bits (243), Expect = 1.4e-17
Identity = 79/176 (44.89%), Postives = 94/176 (53.41%), Query Frame = 1 

Query: 1   MSDLQQQQQQQQQ--PALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFL 60
           MS LQ QQQQQQ   P LVYPN   V  QP  SHHSNGSFG VFIVLAVI+VIS +ACFL
Sbjct: 1   MSSLQPQQQQQQPFGPVLVYPND--VNGQPSSSHHSNGSFGTVFIVLAVIIVISAIACFL 60

Query: 61  GRLCNRRAENQRAKPEKTH-------------GGARPR---GKEPKLHPD-KEGDIEFGL 120
           GRLCNRR  + +   +  H             GG   R   G+ P      K  D+EFG 
Sbjct: 61  GRLCNRRHNSSKPHKQPQHNFRPKKEAGPAGGGGGDHRVEFGRAPSFRAGPKVADVEFGF 120

Query: 121 DLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFK-PFENGQIK-HADDDHHEG 156
           D +NP G   +   G G      H PN P+ + +G K     G++K H   +HH G
Sbjct: 121 DKKNPKGNSSSRGEGRGYM---NHHPNKPHHNGNGEKNRHMKGEMKQHPGGEHHIG 171

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g15290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g15290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTP5_CUCSA2.9e-5772.49Uncharacterized protein OS=Cucumis sativus GN=Csa_5G601520 PE=4 SV=1[more]
E5GBJ1_CUCME4.1e-5673.33Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0S3R266_PHAAN2.2e-1744.81Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G239500 PE=... [more]
A0A0L9TM30_PHAAN2.2e-1744.81Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g120800 PE=4 SV=1[more]
A0A067JUS6_JATCU1.4e-1644.44Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17751 PE=4 SV=1[more]
BLAST of Cp4.1LG01g15290 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G23530.14.3e-1237.02 unknown protein[more]
AT1G70470.16.2e-1138.51 unknown protein[more]
BLAST of Cp4.1LG01g15290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778705033|ref|XP_011655621.1|4.1e-5772.49PREDICTED: uncharacterized protein LOC105435563 [Cucumis sativus][more]
gi|659090788|ref|XP_008446202.1|5.9e-5673.33PREDICTED: putative mediator of RNA polymerase II transcription subunit 19 [Cucu... [more]
gi|1009153616|ref|XP_015894729.1|1.9e-2250.32PREDICTED: uncharacterized protein LOC107428674 [Ziziphus jujuba][more]
gi|645230198|ref|XP_008221824.1|2.2e-1848.95PREDICTED: uncharacterized protein LOC103321770 [Prunus mume][more]
gi|657995478|ref|XP_008390077.1|1.4e-1744.89PREDICTED: uncharacterized protein LOC103452360 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g15290.1Cp4.1LG01g15290.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33429FAMILY NOT NAMEDcoord: 2..110
score: 4.0
NoneNo IPR availablePANTHERPTHR33429:SF7SUBFAMILY NOT NAMEDcoord: 2..110
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g15290Cucsa.286090Cucumber (Gy14) v1cgycpeB0751
Cp4.1LG01g15290CmaCh18G007970Cucurbita maxima (Rimu)cmacpeB431
Cp4.1LG01g15290CmaCh04G017350Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g15290CmoCh18G008010Cucurbita moschata (Rifu)cmocpeB396
Cp4.1LG01g15290Cla010082Watermelon (97103) v1cpewmB428
Cp4.1LG01g15290Csa5G601520Cucumber (Chinese Long) v2cpecuB440
Cp4.1LG01g15290MELO3C011993Melon (DHL92) v3.5.1cpemeB364
Cp4.1LG01g15290ClCG05G025370Watermelon (Charleston Gray)cpewcgB389
Cp4.1LG01g15290CSPI05G22650Wild cucumber (PI 183967)cpecpiB440
Cp4.1LG01g15290Lsi04G005530Bottle gourd (USVL1VR-Ls)cpelsiB353
Cp4.1LG01g15290MELO3C011993.2Melon (DHL92) v3.6.1cpemedB424
Cp4.1LG01g15290Bhi07G001386Wax gourdcpewgoB0555
Cp4.1LG01g15290Carg14335Silver-seed gourdcarcpeB0344
Cp4.1LG01g15290Carg14470Silver-seed gourdcarcpeB1019
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g15290Bottle gourd (USVL1VR-Ls)cpelsiB383
Cp4.1LG01g15290Watermelon (Charleston Gray)cpewcgB418
Cp4.1LG01g15290Cucumber (Gy14) v2cgybcpeB649
Cp4.1LG01g15290Silver-seed gourdcarcpeB0710
Cp4.1LG01g15290Silver-seed gourdcarcpeB0888
Cp4.1LG01g15290Cucumber (Chinese Long) v3cpecucB0544
Cp4.1LG01g15290Wax gourdcpewgoB0529
Cp4.1LG01g15290Cucurbita pepo (Zucchini)cpecpeB033
Cp4.1LG01g15290Cucurbita pepo (Zucchini)cpecpeB116
Cp4.1LG01g15290Cucurbita pepo (Zucchini)cpecpeB406
Cp4.1LG01g15290Cucurbita maxima (Rimu)cmacpeB186
Cp4.1LG01g15290Cucurbita maxima (Rimu)cmacpeB776
Cp4.1LG01g15290Cucurbita moschata (Rifu)cmocpeB162
Cp4.1LG01g15290Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g15290Cucurbita moschata (Rifu)cmocpeB731