CmaCh04G017350 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G017350
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Transmembrane protein, putative
Location	Cma_Chr04 : 8725053 .. 8725556 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGAGCTTCAACAGCAGCAGCAGCCAGCTTTGGTTTATCCCAACACTGCCGCCGTTGGCAGCCAACCTCCTCCTTCCCACCACTCCAACGGCTCATTCGGGGCAGTTTTTATAGTTCTTGCCGTTATTCTTGTCATATCCACTGTTGCTTGCTTCCTTGGCCGACTCTGCAACCGGCGAGCTGAAAACCAGAGGGCGAAGCCGGAGAAAACCCACGGCGGCGCTCGTCCCAGAGGAAAAGAACCCAAATTGCATCCTGACAAAGATGGAGACATCGAATTTGGATTGGATTTGAGAAACCCGAATGGGAAAGGCAAAGCCCTCTCTGGTGGAAATGGAGGAACCAAAGGCAACGGGCATGGGCCTAATGAGCCTAATGGCCACAGCCATGGGTTCAAACCCTTTGAAAATGGCGGCGAAATGAGAGGCCAAATCAAGCACGCGGATGATCATCATCATGAAGGAGATTTCAAGTTCAAAGCAGCAGCTCATCCCGTTTGA

mRNA sequence

ATGTCGGAGCTTCAACAGCAGCAGCAGCCAGCTTTGGTTTATCCCAACACTGCCGCCGTTGGCAGCCAACCTCCTCCTTCCCACCACTCCAACGGCTCATTCGGGGCAGTTTTTATAGTTCTTGCCGTTATTCTTGTCATATCCACTGTTGCTTGCTTCCTTGGCCGACTCTGCAACCGGCGAGCTGAAAACCAGAGGGCGAAGCCGGAGAAAACCCACGGCGGCGCTCGTCCCAGAGGAAAAGAACCCAAATTGCATCCTGACAAAGATGGAGACATCGAATTTGGATTGGATTTGAGAAACCCGAATGGGAAAGGCAAAGCCCTCTCTGGTGGAAATGGAGGAACCAAAGGCAACGGGCATGGGCCTAATGAGCCTAATGGCCACAGCCATGGGTTCAAACCCTTTGAAAATGGCGGCGAAATGAGAGGCCAAATCAAGCACGCGGATGATCATCATCATGAAGGAGATTTCAAGTTCAAAGCAGCAGCTCATCCCGTTTGA

Coding sequence (CDS)

ATGTCGGAGCTTCAACAGCAGCAGCAGCCAGCTTTGGTTTATCCCAACACTGCCGCCGTTGGCAGCCAACCTCCTCCTTCCCACCACTCCAACGGCTCATTCGGGGCAGTTTTTATAGTTCTTGCCGTTATTCTTGTCATATCCACTGTTGCTTGCTTCCTTGGCCGACTCTGCAACCGGCGAGCTGAAAACCAGAGGGCGAAGCCGGAGAAAACCCACGGCGGCGCTCGTCCCAGAGGAAAAGAACCCAAATTGCATCCTGACAAAGATGGAGACATCGAATTTGGATTGGATTTGAGAAACCCGAATGGGAAAGGCAAAGCCCTCTCTGGTGGAAATGGAGGAACCAAAGGCAACGGGCATGGGCCTAATGAGCCTAATGGCCACAGCCATGGGTTCAAACCCTTTGAAAATGGCGGCGAAATGAGAGGCCAAATCAAGCACGCGGATGATCATCATCATGAAGGAGATTTCAAGTTCAAAGCAGCAGCTCATCCCGTTTGA

Protein sequence

MSELQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKDGDIEFGLDLRNPNGKGKALSGGNGGTKGNGHGPNEPNGHSHGFKPFENGGEMRGQIKHADDHHHEGDFKFKAAAHPV

Homology

[Close]

BLAST of CmaCh04G017350 vs. TrEMBL
Match: A0A0A0KTP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G601520 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 7.6e-58
Identity = 130/177 (73.45%), Postives = 139/177 (78.53%), Query Frame = 1


Query: 5   QQQQQPALVYPNTAAV--GSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRA 64
           QQQQQPA VYP+TAA   GSQ PP HHSNGSFGAVFIVLAVI+VIS +ACFLGRLCNRR 
Sbjct: 13  QQQQQPAYVYPDTAATSAGSQVPPPHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRV 72

Query: 65  EN-QRAKPEKTHGGARP-RGKEPKLHPDKDGDIEFGLDLRNPNGKGKALSGGNGGT---- 124
           EN QR KPEK+H GARP RGKEPKLHPDK+GDIEFG DLRNP+GKGK  SGGNG T    
Sbjct: 73  ENHQRPKPEKSHSGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKGKFPSGGNGSTGNGN 132

Query: 125 -----KGNGHGP---NEPNGHSHGFKPFENGGEMRGQIKHADDHHHEGDFKFKAAAH 166
                KGNG+GP   N PNGH + FKPFENGGE R +IKH D  HHEGDF FKAA H
Sbjct: 133 GGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTD--HHEGDFNFKAAGH 187

[Close]

BLAST of CmaCh04G017350 vs. TrEMBL
Match: E5GBJ1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.1e-56
Identity = 128/176 (72.73%), Postives = 137/176 (77.84%), Query Frame = 1


Query: 5   QQQQQPALVYPNTAAV--GSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRA 64
           QQQQQPA VYP+TAA   GSQ PPSHHSNGSFGAVFIVLAVI+VIS +ACFLGRLCNRR 
Sbjct: 16  QQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRV 75

Query: 65  EN-QRAKPEKTHGGARP-RGKEPKLHPDKDGDIEFGLDLRNPNGKGKALSGGNGG----- 124
           EN QR KPEK+H GARP RGKEPKLHPDK+GDIEFG DLRNP+GKGK   GGNG      
Sbjct: 76  ENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKGKFPPGGNGNGNGNG 135

Query: 125 ---TKGNGHGP---NEPNGHSHGFKPFENGGEMRGQIKHADDHHHEGDFKFKAAAH 166
               KGNG+GP   N PNGH + FKPFENGGE R +IKH D  HHEGDF FKA  H
Sbjct: 136 GSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTD--HHEGDFNFKAGGH 189

[Close]

BLAST of CmaCh04G017350 vs. TrEMBL
Match: A0A067JUS6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17751 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.6e-18
Identity = 76/165 (46.06%), Postives = 91/165 (55.15%), Query Frame = 1


Query: 5   QQQQQPALVYPNTAAVGSQPPPSH-HSNGSFGAVFIVLAVILVISTVACFLGRLCNRRA- 64
           Q QQQP +VYPNT  VG  PP S+ HSNGSFG VFIVLAVI+VIS +AC LGRLC RR  
Sbjct: 4   QPQQQPVVVYPNTV-VGQPPPASNSHSNGSFGTVFIVLAVIIVISAIACCLGRLCKRRQA 63

Query: 65  -----ENQRAKPEKTHGGARP------RGKEPKLHPDKDGDIEFGLDLRNPNGKGKALSG 124
                  Q  KP        P      RG+E +   +++GD+EFG D   P G+    S 
Sbjct: 64  AAGGNHKQGNKPNNKQSQQNPNFRPKERGREREREREREGDVEFGFDKGFPVGR----ST 123

Query: 125 GNGGTKG-----NGHGPNEPNGHSHGFKPFENGGEMRGQIKHADD 152
           GNG  +G     NGH  N  NGH HG     +G  M+G+    DD
Sbjct: 124 GNGDGRGHKLSENGH--NNINGHGHG-HGHGHGHHMKGESYSVDD 160

[Close]

BLAST of CmaCh04G017350 vs. TrEMBL
Match: A0A0L9TM30_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g120800 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.9e-17
Identity = 69/162 (42.59%), Postives = 89/162 (54.94%), Query Frame = 1


Query: 1   MSELQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNR 60
           MS   Q QQP  VYP      +QPP SHHSNGSFGAVFIVLA+ILVIS VAC LGRLCN+
Sbjct: 1   MSLQDQPQQPVQVYPT-----NQPPSSHHSNGSFGAVFIVLAIILVISVVACVLGRLCNK 60

Query: 61  RAENQRAKPEKTHGGARPRGKEPKLH---PDKDGDIEFGLDLRNPNGKGKALSGGNGGTK 120
           R  +  +   +      P+   P++H   P  +GDIEFG+D R P    +    G G   
Sbjct: 61  RYNSHSSSSSQ----RAPKQHRPQVHDLRPRDEGDIEFGVDKRMPPPIIRTKVQGQGHGH 120

Query: 121 GNGHGPNEPNGHSHGFKPFENGGEMRGQIKHADDHHHEGDFK 160
           G+GHG +  +GH          G   G  +H +D+  E + +
Sbjct: 121 GHGHGHHGHHGH----------GASTGPHRHVNDNMKEFEMR 143

[Close]

BLAST of CmaCh04G017350 vs. TrEMBL
Match: A0A0S3R266_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G239500 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.9e-17
Identity = 69/162 (42.59%), Postives = 89/162 (54.94%), Query Frame = 1


Query: 1   MSELQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNR 60
           MS   Q QQP  VYP      +QPP SHHSNGSFGAVFIVLA+ILVIS VAC LGRLCN+
Sbjct: 1   MSLQDQPQQPVQVYPT-----NQPPSSHHSNGSFGAVFIVLAIILVISVVACVLGRLCNK 60

Query: 61  RAENQRAKPEKTHGGARPRGKEPKLH---PDKDGDIEFGLDLRNPNGKGKALSGGNGGTK 120
           R  +  +   +      P+   P++H   P  +GDIEFG+D R P    +    G G   
Sbjct: 61  RYNSHSSSSSQ----RAPKQHRPQVHDLRPRDEGDIEFGVDKRMPPPIIRTKVQGQGHGH 120

Query: 121 GNGHGPNEPNGHSHGFKPFENGGEMRGQIKHADDHHHEGDFK 160
           G+GHG +  +GH          G   G  +H +D+  E + +
Sbjct: 121 GHGHGHHGHHGH----------GASTGPHRHVNDNMKEFEMR 143

[Close]

BLAST of CmaCh04G017350 vs. TAIR10
Match: AT1G23530.1 (AT1G23530.1 unknown protein)

HSP 1 Score: 72.0 bits (175), Expect = 3.9e-13
Identity = 66/184 (35.87%), Postives = 90/184 (48.91%), Query Frame = 1


Query: 4   LQQQQQPALVYPNT-----AAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLC 63
           +QQ QQP +VYPN          ++P  S  S+G+FG VFIVLAVI V+S +AC  GRLC
Sbjct: 6   VQQMQQPIVVYPNAYNKQYPDPSTKPSSSSGSSGNFGTVFIVLAVIFVLSALACVFGRLC 65

Query: 64  NRR---AENQRAKPEKTHGGARPRGKE---PKLHPDKDGDIEFGLDLRNPNGKGKALSGG 123
           NR    A+ Q +K  K    +  + +E    +  P + GD++FG D++ P    K  SG 
Sbjct: 66  NRESRAAKQQHSKHPKHEKASSKKSREIRPVEREPRERGDMDFGFDMKRPEPIEKP-SGR 125

Query: 124 NGGTK----------------GNGHGPNEPN-GHSHGFKPFENGGEMRGQIKHADDHHHE 160
           +GG                  G G GP  PN  H+  FK  ENG           DHH +
Sbjct: 126 DGGEDIEFGFDNKRGERGREGGGGGGPPPPNIKHAVRFKLPENG-----------DHHSK 177

[Close]

BLAST of CmaCh04G017350 vs. TAIR10
Match: AT1G70470.1 (AT1G70470.1 unknown protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11
Identity = 52/149 (34.90%), Postives = 70/149 (46.98%), Query Frame = 1


Query: 1   MSELQQQQQPALVYPNTAAVGSQP--PPSHHSNGSFGAVFIVLAVILVISTVACFLGRLC 60
           M +  Q+ Q   VYP+T++  S    P S  S+GSFG  FIVLA ILV++ +AC  GRLC
Sbjct: 1   MGDQPQEFQQPQVYPSTSSSTSSSFSPSSSGSSGSFGTAFIVLAAILVLAALACVFGRLC 60

Query: 61  NR-------RAENQRAKPEKTHGGARPRGKEPKLHPDKDGDIEFGLDLRNPNGKGKALS- 120
           NR       +  N+ +K EK         +  +  P + GD+EFG D++ P    K    
Sbjct: 61  NRGGKQHKDKNNNKASKHEKPSSKKSREIRPVEREPRERGDVEFGFDMKRPGPMSKPTGR 120

Query: 121 -------------GGNGGTKGNGHGPNEP 127
                        GG GG  G G G   P
Sbjct: 121 NGGDIEFGFDNKRGGGGGGGGGGKGGKRP 149

[Close]

BLAST of CmaCh04G017350 vs. NCBI nr
Match: gi|778705033|ref|XP_011655621.1| (PREDICTED: uncharacterized protein LOC105435563 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 1.1e-57
Identity = 130/177 (73.45%), Postives = 139/177 (78.53%), Query Frame = 1


Query: 5   QQQQQPALVYPNTAAV--GSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRA 64
           QQQQQPA VYP+TAA   GSQ PP HHSNGSFGAVFIVLAVI+VIS +ACFLGRLCNRR 
Sbjct: 13  QQQQQPAYVYPDTAATSAGSQVPPPHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRV 72

Query: 65  EN-QRAKPEKTHGGARP-RGKEPKLHPDKDGDIEFGLDLRNPNGKGKALSGGNGGT---- 124
           EN QR KPEK+H GARP RGKEPKLHPDK+GDIEFG DLRNP+GKGK  SGGNG T    
Sbjct: 73  ENHQRPKPEKSHSGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKGKFPSGGNGSTGNGN 132

Query: 125 -----KGNGHGP---NEPNGHSHGFKPFENGGEMRGQIKHADDHHHEGDFKFKAAAH 166
                KGNG+GP   N PNGH + FKPFENGGE R +IKH D  HHEGDF FKAA H
Sbjct: 133 GGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTD--HHEGDFNFKAAGH 187

[Close]

BLAST of CmaCh04G017350 vs. NCBI nr
Match: gi|659090788|ref|XP_008446202.1| (PREDICTED: putative mediator of RNA polymerase II transcription subunit 19 [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 1.6e-56
Identity = 128/176 (72.73%), Postives = 137/176 (77.84%), Query Frame = 1


Query: 5   QQQQQPALVYPNTAAV--GSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRA 64
           QQQQQPA VYP+TAA   GSQ PPSHHSNGSFGAVFIVLAVI+VIS +ACFLGRLCNRR 
Sbjct: 16  QQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRV 75

Query: 65  EN-QRAKPEKTHGGARP-RGKEPKLHPDKDGDIEFGLDLRNPNGKGKALSGGNGG----- 124
           EN QR KPEK+H GARP RGKEPKLHPDK+GDIEFG DLRNP+GKGK   GGNG      
Sbjct: 76  ENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKGKFPPGGNGNGNGNG 135

Query: 125 ---TKGNGHGP---NEPNGHSHGFKPFENGGEMRGQIKHADDHHHEGDFKFKAAAH 166
               KGNG+GP   N PNGH + FKPFENGGE R +IKH D  HHEGDF FKA  H
Sbjct: 136 GSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTD--HHEGDFNFKAGGH 189

[Close]

BLAST of CmaCh04G017350 vs. NCBI nr
Match: gi|1009153616|ref|XP_015894729.1| (PREDICTED: uncharacterized protein LOC107428674 [Ziziphus jujuba])

HSP 1 Score: 112.8 bits (281), Expect = 5.6e-22
Identity = 80/177 (45.20%), Postives = 95/177 (53.67%), Query Frame = 1


Query: 5   QQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAEN 64
           QQQQQP LVYPNT  V  QPP SHHSNGSFG VFIVLA+I+VIS +ACFLGRLCNRRA N
Sbjct: 19  QQQQQPVLVYPNT--VTKQPPNSHHSNGSFGTVFIVLAIIVVISAIACFLGRLCNRRAHN 78

Query: 65  QRAKPEKTHGGARPRGKE-------------PKLHP------------DKDGDIEFGLDL 124
              KP K    A+  G E             PK  P             K+GD+EFGLD+
Sbjct: 79  SNPKPPKQSSRAKEGGSEGGNGKNNHHNKIRPKERPGSEFGSGTNGFRQKEGDLEFGLDM 138

Query: 125 R--------NPNGKGKALSGGNGGTKGNGHGPNEPNGHSHGFKPFENGGEMRGQIKH 149
           R        +  G G A +G   G++G+G      NG          GG+M+  +KH
Sbjct: 139 RSKPSGFRSDSRGHGHAGNGFRSGSRGHGGDHGIING---------GGGDMKVDMKH 184

[Close]

BLAST of CmaCh04G017350 vs. NCBI nr
Match: gi|645230198|ref|XP_008221824.1| (PREDICTED: uncharacterized protein LOC103321770 [Prunus mume])

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-20
Identity = 79/168 (47.02%), Postives = 89/168 (52.98%), Query Frame = 1


Query: 1   MSELQ-QQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCN 60
           MS LQ QQQQPALVYPN   V  QP  SHHSNGSFG VFIVLAVI+VIS +ACFLGRLCN
Sbjct: 1   MSSLQPQQQQPALVYPNN--VRGQPSSSHHSNGSFGTVFIVLAVIVVISAIACFLGRLCN 60

Query: 61  RRAENQRAKPEKTHGGARPRGKE---------------PKLHPDKDGDIEFGLDLRNPNG 120
           RR  N +   +  H   RP  KE               P     KD DIEFG D + PNG
Sbjct: 61  RRLHNSKPNKQPAH-NLRPSKKEAVVDHNHMEFGNNNNPSFRAPKDADIEFGFDKKIPNG 120

Query: 121 KGKALSGGNGGTKGNGHGPNEPNGHSHGFKPFENGGEMRGQIKHADDH 153
            G      + G   N   P+  NG  H          M+G++K   DH
Sbjct: 121 NGS--RSESRGYMNNHSKPHHGNGDHH--------IHMKGEMKQPGDH 155

[Close]

BLAST of CmaCh04G017350 vs. NCBI nr
Match: gi|657995478|ref|XP_008390077.1| (PREDICTED: uncharacterized protein LOC103452360 [Malus domestica])

HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18
Identity = 77/179 (43.02%), Postives = 92/179 (51.40%), Query Frame = 1


Query: 1   MSELQQQQQ------PALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFL 60
           MS LQ QQQ      P LVYPN   V  QP  SHHSNGSFG VFIVLAVI+VIS +ACFL
Sbjct: 1   MSSLQPQQQQQQPFGPVLVYPND--VNGQPSSSHHSNGSFGTVFIVLAVIIVISAIACFL 60

Query: 61  GRLCNRRAENQRAKPEKTH-------------GGARPR---GKEPKLHP-DKDGDIEFGL 120
           GRLCNRR  + +   +  H             GG   R   G+ P      K  D+EFG 
Sbjct: 61  GRLCNRRHNSSKPHKQPQHNFRPKKEAGPAGGGGGDHRVEFGRAPSFRAGPKVADVEFGF 120

Query: 121 DLRNPNGKGKALSGGNGGTKGNGHGPNEPNGHSHGFKPFENGGEMRGQIKHADDHHHEG 157
           D +NP G   +   G G      H PN+P+ + +G K     GEM+   +H    HH G
Sbjct: 121 DKKNPKGNSSSRGEGRGYM---NHHPNKPHHNGNGEKNRHMKGEMK---QHPGGEHHIG 171

The following BLAST results are available for this feature:

BLAST of CmaCh04G017350 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh04G017350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTP5_CUCSA	7.6e-58	73.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G601520 PE=4 SV=1	[more]
E5GBJ1_CUCME	1.1e-56	72.73	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A067JUS6_JATCU	7.6e-18	46.06	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17751 PE=4 SV=1	[more]
A0A0L9TM30_PHAAN	2.9e-17	42.59	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g120800 PE=4 SV=1	[more]
A0A0S3R266_PHAAN	2.9e-17	42.59	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G239500 PE=...	[more]

BLAST of CmaCh04G017350 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23530.1	3.9e-13	35.87	unknown protein	[more]
AT1G70470.1	1.6e-11	34.90	unknown protein	[more]

BLAST of CmaCh04G017350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778705033\|ref\|XP_011655621.1\|	1.1e-57	73.45	PREDICTED: uncharacterized protein LOC105435563 [Cucumis sativus]	[more]
gi\|659090788\|ref\|XP_008446202.1\|	1.6e-56	72.73	PREDICTED: putative mediator of RNA polymerase II transcription subunit 19 [Cucu...	[more]
gi\|1009153616\|ref\|XP_015894729.1\|	5.6e-22	45.20	PREDICTED: uncharacterized protein LOC107428674 [Ziziphus jujuba]	[more]
gi\|645230198\|ref\|XP_008221824.1\|	1.4e-20	47.02	PREDICTED: uncharacterized protein LOC103321770 [Prunus mume]	[more]
gi\|657995478\|ref\|XP_008390077.1\|	2.2e-18	43.02	PREDICTED: uncharacterized protein LOC103452360 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G017350.1	CmaCh04G017350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33429	FAMILY NOT NAMED	coord: 1..106 score: 2.3
None	No IPR available	PANTHER	PTHR33429:SF7	SUBFAMILY NOT NAMED	coord: 1..106 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G017350	Cucsa.286090	Cucumber (Gy14) v1	cgycmaB0802
CmaCh04G017350	Cla010082	Watermelon (97103) v1	cmawmB700
CmaCh04G017350	Csa5G601520	Cucumber (Chinese Long) v2	cmacuB749
CmaCh04G017350	MELO3C011993	Melon (DHL92) v3.5.1	cmameB641
CmaCh04G017350	ClCG05G025370	Watermelon (Charleston Gray)	cmawcgB656
CmaCh04G017350	CSPI05G22650	Wild cucumber (PI 183967)	cmacpiB758
CmaCh04G017350	CmoCh18G008010	Cucurbita moschata (Rifu)	cmacmoB710
CmaCh04G017350	Lsi04G005530	Bottle gourd (USVL1VR-Ls)	cmalsiB670
CmaCh04G017350	Cp4.1LG01g15290	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G017350	MELO3C011993.2	Melon (DHL92) v3.6.1	cmamedB727
CmaCh04G017350	Cla97C05G107530	Watermelon (97103) v2	cmawmbB759
CmaCh04G017350	Bhi07G001386	Wax gourd	cmawgoB0891
CmaCh04G017350	Carg14335	Silver-seed gourd	carcmaB0339
CmaCh04G017350	Carg14470	Silver-seed gourd	carcmaB1013

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G017350	CmaCh18G007970	Cucurbita maxima (Rimu)	cmacmaB404

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G017350	Silver-seed gourd	carcmaB0706
CmaCh04G017350	Cucumber (Chinese Long) v3	cmacucB0886
CmaCh04G017350	Watermelon (97103) v2	cmawmbB789
CmaCh04G017350	Wax gourd	cmawgoB0863
CmaCh04G017350	Cucurbita maxima (Rimu)	cmacmaB189
CmaCh04G017350	Cucurbita maxima (Rimu)	cmacmaB540
CmaCh04G017350	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G017350	Cucurbita moschata (Rifu)	cmacmoB747
CmaCh04G017350	Cucurbita pepo (Zucchini)	cmacpeB694
CmaCh04G017350	Cucurbita pepo (Zucchini)	cmacpeB704
CmaCh04G017350	Cucurbita pepo (Zucchini)	cmacpeB756
CmaCh04G017350	Bottle gourd (USVL1VR-Ls)	cmalsiB704
CmaCh04G017350	Cucumber (Gy14) v2	cgybcmaB675