Cp4.1LG01g02500 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g02500
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionReticulon-like protein
LocationCp4.1LG01 : 2450337 .. 2455651 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAAGTTCTGATTCAGAGGGTTGTTGAAATTTCTGGGTGTTGGAATTCTCCGTTTTCTCCCTTCAGTTCTTAAATCTTCATCTTTCTCTCTGCTTTCAATTCTTGTTTTCTCTGAAACCCTAATCATGTCCATGGGATCCAATTCTACTCGTCGCATTTCTGTTCATCAAGTGCTCGGCGGTGGTCCTGGTACTTCTCTTCTCTGTACTGCTCTTTTTGCGATCTTTCTATTTTCGAATTGGAACTTACATTGATGCTTTAGAATTCCCTCCTCGATCTGGGTTTACTTCATGTTTCGATAATGAATTGTTTTGGTCTAATGTCGTTTTATCGCAATCTTTGTCTGAATTATGTGTTTCATTTGGCTGATTTTGTTCAATTCTATTAAATATGTTGTTGGTTCGCTAATTTAGCTATTGATGACAGTGGCTGATATGCTCCTATGGAAGAAATGGTGTGGTGGTGCTGTCATACTCACGTCTACAACTGCTTTGTGGTACCTGTTTGAAAGAGCCGATTACAACTTCTTATCTTTTGTTGCCAATGTTCTATTGCTTCTTGTCCTCATTCTTTTCGTCTGGGCCAAATCTGCTTCCCTTCTCAATAGGTACTTTGACTCTTCCTTCTGCCAGCTTTTAGTGCTTTACATAGTTTTATTTTCTAATCTCCACTTCTTGGGTGGAAGTTTGTGGATGCGTTATGGTTGTTTTAGGGACGATGAATCAAAAGTAAATAACATACATTGTAAAAGAGAACCATTTTATTGTGCAAAATCTTGAGAATAGTTTGTTTGATCAAGGGATGACGAAACGGTCAGGGTTTGAAACTGCAGCCCATATACAGTTCTGTACAAACTTGGACTCCTTTTTGTGGAACCATTTGTGTAAGAGAAGAACATTGTCAAATTTTTCGTTGGAGAAGTAATCGTGTATTTGAGATAATATGACTTAGATTGAAATGGAATGTATACATTCTCAAGGCTTGAGTTCAAATGGACGTAGAGTAAAAGTTACCTTCTTTTGTGATTCAGACCTCTGCCTCCGCTTCCTGATCTGGAAATTTCTGAGGAATCTGTTTCGATAGTTGCTGATGAACTGCGATTGTGGGTCAATTTTGCACTGTCAATTGCACGCGATATTGCAATAGGAAGAAACCTTAAGCTCTTTCTTCAGGTTAGGGTAATCACTTGTCTTATCGTCTGTGATGACCGCGACTTGTGTGTTAATTTATTCACGTTCTCAGGTTGCTCTTGGACTATGGATTTCATCATTCATTGGCAGATTCTTCAATTTTCTTACACTGGTCTATTTTGGTGAGTTCTTTGGGGCTCTCATTTCTATGTAATCAGCGGTTCAAAAATCATATCTGTTGCTATCTTCAACAATTTATGCATTCTATCAATATATTTGTTTCAGGGGTCCTTCTCAGTCTTTCAGCTCCGCTAGTGTACGATAAGTACCAGGATCCCATTGATGAAAAGTTGTGTGTAACACATAGATATGTACAAATGCAATACAGGAAGCTTGATGAGAATGTCTTAAGGAAGTTACCATTACCCTTAAACAAGGAGAAGAAGATGCAATAGGCACAGCACTCGCTTGATGATCAGTAACTTCAAAAGAAGTGAGCTGGATCTACCTTTTTCATAATGCTCTAACTCCATTTTTGTATTCTGATGTGTCCGATGAATATTATTTCAGATCAACATAAAGTGAGTGTTATGTACTTTTATTCTGATGGCTTGTAAAAAAATCTCTTATTGATTCCTTTGTTGTGTGTGTTTCCTTCCTTCAATTTGAGCATCAGCTGATTTCTTTCTGTTGTAATTTAAATACCATCTATTCCTTTATCAAGGATCGTTAGATCTTGAAACTCGTGAATAAGTTCTGGTAGCTTGTGAGATTAGACTACTACCTATTAAGTTTACATGTCCTGCATATTAATATCTCAGAAGATTTCACAAAATTTTTATCTAGTTTTCAACTTTTTAGAAATATTATGGCTAATGGTTTAGTTAATAGTAAATTTTCTTTTACATGAAGATTTCATTTTGCTTGATTATATAGATGCATTATTAACTCGTTACAAAATCGATTTCCTCTCCTCTTGCCCTGGCTTGTTTGAGAAATAGAAATAGATTTACTTTGATTGTTTGTCTCTTGCCTTGCTTTAATCAAGTTAGCTTCCGCTATTTTAAGAGTTTGTCGATCTCCTCGTAGATCAACGTTCTTACATAGTAGTCTTTTCCATATCATGTATTAAAACGGGGATCTCATTATTACCCTTTTTTTTTAGCAAAACCACCCATCTGAGTCATCCTTAACCATTGGTCACTAATTATGATTAACTGAAGTTGAATTCTTGCTTTGAAATTCATTTTCTAGGCCGAAGTAACCAATCTATCTCGTAGTAAAAGATTTAAGTGGGTGATATTATACTGTTCTTACAAGTCTTAGATGGGCTGACCTGATGCTTGAGTGTGTTCTATACTGCAATGGTTTTTTCCAATTTAGTTCAACTAATCATTGCTTCACTGGAAATTTAAGATGATGATGAGTTTGTGTTTGGTAAGAAAATTTCCATATTGAGATTTCTTTCTGGGGCAAATATGACTTGTTATACCTTGATTTTTGTTGGTTGCTGAAAAACTTTAGTTTAGTTTCTTTGTTCATCAAGTGTTGGGTTTTCAAATTTGCATCTGATTTGCTTTGGTTTTACTTGTTGCTACTTTGAAGTACGCAGAGGCACATTGGCTTTCAACAGAGGACGATCAGTAGATTTGAAAATTTCGATCAGAGACATTGAGATTGCTTTTGAATGAGATGTACTTCAGCATTCTAGATCTTTTAGAAAGTTGTGGTATATAACTTAACATAAATGTATCCTGACTTTGACTTTGGGCTGAAAACTAAAAGCGTTAATGTTCGGTTTTGGATCGAAATGGTATGGTGTCTTGTAATCACTAGTGTTTGGTTTTGGATTGAACTTTGTTGTTACAGCTGAATGATTTTGTGATGTAGTTTTTTGGTTTGTGTTCGAGTTCTGCATACGCTTCGGTGTAGATACTCGAACATAGCATCTCGTAACCGATGGAAACTAAAGCCACTTAAACTCGATGTTCAATTAGCAGCACCTTGATCAGTAGAAGACTGAAAATTTATTTATCTTAACATGTTGCTAAGGCTGACTAGTTCCTTTGCCTTTCAGGTGTAATGACAAAGAAAAATGACCCATCTCATGTGACACACATGTAAGTTCCTCCTGAACCTCACTTTTAAGGTAAAACGTCTCGCATCTAGTAGACAATAAAAAAATTTATCAAAGACTCGCATGGAATAGAGAAATTATTATTACTGGGACACTCCTGCACCAAAGCACATGTATTTTTGTCTCCTGGTTTGTATGGGGCTCTGCAAAGGACGCAACTGTTCATATATATTTATTTAAGCTGTCCAAGTCATTTACGGTTCTTTATAAAATCCTCAAGTATCTTAGTTATAACCTTTGAGTTTGGTACATCCTGAATTATATATATATATTTCTCTGGAAAGTTGTAAGTAATGGGCACATGGTCTGTGTGCTAAACCATAGGACGCACAAAAGGTAGCAGAAAAAGGCCAAAAGGATAGAGAATTTATTGCACTTTTTAAGGGTGTTTGGTTTTTTTGTATTAGATTAATGAATTAGGAGTATACTTGTTCCAAGTTTTGGATTTGATAATCTTACATCAAAGCATAATACCTTTCATAGATCACAAACTCATAAACCGCTAGCAAATATTGTCCTTTTTGGGCTTTCCTTTCGAGCTTCCCCTCAAGGCTTTAAAATGCATCTGCTAGGGAAAGGTTTTCGCACTCTTATAAAGGTGTTTCGTTCTCCTCCCCAACCAATGTGGGTATCACAATCCACCCCTTTTCGGGGCCTAGAGTCCTCACTGGCACTCGTTCCTTTCTCCAATCGATGTGGGACCATCGTCTCAGCGTCCTTACTGGCACTCCGCCTCGTGTCTATCTCCCTTCGGGGAATAGCCTCCTCGTTGGCTCTGATACCATTTGTAATGGCCCAACCCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTTCCTTTTGGGCTTTCCCTCAAGGCTTTAAAACACGTATGCTAGGGAAAGGTTTCCACACCTTTATAAAGAGTGCTTCGTTCTCCTCCCTAACCAATGTGGGATATCACAATCCACCCCCCTTCAGGGCCCAGCATCCTTGCTAGCACTCGTTCCTTTCTCCAATCGATGTGGGACCACCACCAAATCTACCCCCTTCGGGGAACAGCCTCCTTGCTGGCACATCACAGAGTGTCTGCCTCTCATACTATTTGTAACAGCCGAAGCCCACCGCTAGCAAGTATTGTCCTCTTTGGGCTTTCTCTTTTGAGCTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGAAATGTTTCTACACCTTTATAAAGGGTGTTTCGCTTTTCTCCCGAACCAATGTGGGACATCACACCAAGAATCACATCAAAAGCTTTTGCTACACATTCAAATTTTCCAATTCCTGACTAAGACAACACAGATTCAGATTTCCTTTTAGGAAGCTTTTTGCAGTCAAATTCTTTCTAGTGTTCATAATTGTTACGGAGAAGTGAATTTGAAGCTGCTGATTGATAGGGATAGAGAGATAAATAATGCTTTAAGTAGACGGAAGCATCATTCATGTTTTGTTTTGATTGGTCCAAACGCTTTTTAGATCCAAAGTACGAACGGTGAAGGCAAGGAGCATGCATTCATGCGTCTCATAGGGAGACCAACAACACTTTCTGGACAACAGGTTGGCCTTACAGACCCATTATATCAATTTCATCGCTTTCAAAATCACACTCTTTTCTGATCAACAAAACTTACACTATCAATCTCAGTTTGATCATGATGAATGCTTCTCAAATTCCATGTTTTTCATTTGTTTTTTGCCCATTTGATCACCATTCTTCAAGAGTATGCTTATGTTCTTACCATTTCTTTATGGGATTTGAAAATTTGATAGTGAAAAAGACAGGGTTTTAGGGATGGAATCTTTGACAGTGCAGTGTGGGAATCAGGGCTTGGGTTGGTGTTGGTGTTGGTGTTGGTGGTGGGGTGGTCCTATAAATGCTTATAGGACCATCCCATATTTATCATCTTTCTAAGGTCCATAATTTCTTTTTTCTTTTTTCTTTTTTCTCAGGATAAATACTTTATTTATTTATTTATTTGAATCACAAGTATATGTTTTAAAATATATTATTTTACAGAAACATTTACACCCCCAAACAT

mRNA sequence

ATAAAGTTCTGATTCAGAGGGTTGTTGAAATTTCTGGGTGTTGGAATTCTCCGTTTTCTCCCTTCAGTTCTTAAATCTTCATCTTTCTCTCTGCTTTCAATTCTTGTTTTCTCTGAAACCCTAATCATGTCCATGGGATCCAATTCTACTCGTCGCATTTCTGTTCATCAAGTGCTCGGCGGTGGTCCTGTGGCTGATATGCTCCTATGGAAGAAATGGTGTGGTGGTGCTGTCATACTCACGTCTACAACTGCTTTGTGGTACCTGTTTGAAAGAGCCGATTACAACTTCTTATCTTTTGTTGCCAATGTTCTATTGCTTCTTGTCCTCATTCTTTTCGTCTGGGCCAAATCTGCTTCCCTTCTCAATAGACCTCTGCCTCCGCTTCCTGATCTGGAAATTTCTGAGGAATCTGTTTCGATAGTTGCTGATGAACTGCGATTGTGGGTCAATTTTGCACTGTCAATTGCACGCGATATTGCAATAGGAAGAAACCTTAAGCTCTTTCTTCAGGTTGCTCTTGGACTATGGATTTCATCATTCATTGGCAGATTCTTCAATTTTCTTACACTGGTCTATTTTGGGGTCCTTCTCAGTCTTTCAGCTCCGCTAGTGTACGATAAGTACCAGGATCCCATTGATGAAAAGTTGTGTGTAACACATAGATATGTACAAATGCAATACAGGAAGCTTGATGAGAATGTCTTAAGGAAGTTACCATTACCCTTAAACAAGGAGAAGAAGATGCAATAGGCACAGCACTCGCTTGATGATCAGTAACTTCAAAAGAATACGCAGAGGCACATTGGCTTTCAACAGAGGACGATCAGTAGATTTGAAAATTTCGATCAGAGACATTGAGATTGCTTTTGAATGAGATGTACTTCAGCATTCTAGATCTTTTAGAAAGTTGTGGTATATAACTTAACATAAATGTATCCTGACTTTGACTTTGGGCTGAAAACTAAAAGCGTTAATGTTCGGTTTTGGATCGAAATGGTATGGTGTCTTGTAATCACTAGTGTTTGGTTTTGGATTGAACTTTGTTGTTACAGCTGAATGATTTTGTGATGTAGTTTTTTGGTTTGTGTTCGAGTTCTGCATACGCTTCGGTGTAGATACTCGAACATAGCATCTCGTAACCGATGGAAACTAAAGCCACTTAAACTCGATGTTCAATTAGCAGCACCTTGATCAGTAGAAGACTGAAAATTTATTTATCTTAACATGTTGCTAAGGCTGACTAGTTCCTTTGCCTTTCAGGTGTAATGACAAAGAAAAATGACCCATCTCATGTGACACACATATCCAAAGTACGAACGGTGAAGGCAAGGAGCATGCATTCATGCGTCTCATAGGGAGACCAACAACACTTTCTGGACAACAGTGAAAAAGACAGGGTTTTAGGGATGGAATCTTTGACAGTGCAGTGTGGGAATCAGGGCTTGGGTTGGTGTTGGTGTTGGTGTTGGTGGTGGGGTGGTCCTATAAATGCTTATAGGACCATCCCATATTTATCATCTTTCTAAGGTCCATAATTTCTTTTTTCTTTTTTCTTTTTTCTCAGGATAAATACTTTATTTATTTATTTATTTGAATCACAAGTATATGTTTTAAAATATATTATTTTACAGAAACATTTACACCCCCAAACAT

Coding sequence (CDS)

ATGTCCATGGGATCCAATTCTACTCGTCGCATTTCTGTTCATCAAGTGCTCGGCGGTGGTCCTGTGGCTGATATGCTCCTATGGAAGAAATGGTGTGGTGGTGCTGTCATACTCACGTCTACAACTGCTTTGTGGTACCTGTTTGAAAGAGCCGATTACAACTTCTTATCTTTTGTTGCCAATGTTCTATTGCTTCTTGTCCTCATTCTTTTCGTCTGGGCCAAATCTGCTTCCCTTCTCAATAGACCTCTGCCTCCGCTTCCTGATCTGGAAATTTCTGAGGAATCTGTTTCGATAGTTGCTGATGAACTGCGATTGTGGGTCAATTTTGCACTGTCAATTGCACGCGATATTGCAATAGGAAGAAACCTTAAGCTCTTTCTTCAGGTTGCTCTTGGACTATGGATTTCATCATTCATTGGCAGATTCTTCAATTTTCTTACACTGGTCTATTTTGGGGTCCTTCTCAGTCTTTCAGCTCCGCTAGTGTACGATAAGTACCAGGATCCCATTGATGAAAAGTTGTGTGTAACACATAGATATGTACAAATGCAATACAGGAAGCTTGATGAGAATGTCTTAAGGAAGTTACCATTACCCTTAAACAAGGAGAAGAAGATGCAATAG

Protein sequence

MSMGSNSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNLKLFLQVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQMQYRKLDENVLRKLPLPLNKEKKMQ
Homology
[Close]
BLAST of Cp4.1LG01g02500 vs. Swiss-Prot
Match: RTNLK_ARATH (Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.6e-58
Identity = 118/203 (58.13%), Postives = 150/203 (73.89%), Query Frame = 1 

Query: 6   NSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLLL 65
           +S+ R+SVHQ LG G VAD+LLW+   G  ++L S+T  W+LFERA YN LSFV+NVLLL
Sbjct: 6   SSSSRVSVHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLL 65

Query: 66  LVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNLK 125
           LV I F+WAKSA++LNRPLPP+P++EI EE  +  AD+LR+W+N+ LSIA DI I RN  
Sbjct: 66  LVAIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPI 125

Query: 126 LFLQVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQMQ 185
             LQV+L LW  S++G   N LTLVY GVLLSLS P+VY+KYQD IDEK+  T ++V+  
Sbjct: 126 RLLQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEKVNSTSKFVR-- 185

Query: 186 YRKLDENVLRKLPLPLNKEKKMQ 209
                 N+ RK PLP+NKEKK Q
Sbjct: 186 ------NISRKFPLPINKEKKHQ 200

[Close]
BLAST of Cp4.1LG01g02500 vs. Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 9.7e-56
Identity = 110/198 (55.56%), Postives = 148/198 (74.75%), Query Frame = 1 

Query: 12  SVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLLLLVLILF 71
           SVHQ +  G VAD+++WK   GG ++L STT LW+LFE+  Y+F  FV N  LL V+ILF
Sbjct: 4   SVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILF 63

Query: 72  VWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNLKLFLQVA 131
           +WAKSA L NRP+P LP+LEI+EE V +VAD +R+W+N  L++AR+I +GRN K   +V+
Sbjct: 64  LWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVS 123

Query: 132 LGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQMQYRKLDE 191
           + LW  SF+G F NFLT++Y GV+LSL  P +Y++YQD IDEKL +THR +Q QYRK+DE
Sbjct: 124 VVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDE 183

Query: 192 NVLRK-LPLPLNKEKKMQ 209
            +L+K +  P NK KKMQ
Sbjct: 184 RLLQKIIAKPTNKIKKMQ 201

[Close]
BLAST of Cp4.1LG01g02500 vs. Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-34
Identity = 79/197 (40.10%), Postives = 122/197 (61.93%), Query Frame = 1 

Query: 9   RRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLLLLVL 68
           R   VH+VLGGG  AD+ LW+       +L   TA+W LFE  +Y+ LS + ++ +L + 
Sbjct: 55  REKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALG 114

Query: 69  ILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNLKLFL 128
            LF+W+ + +L+N+  P +P++ + EE+  +VA  LR  +N A  I R IA+GR+LK FL
Sbjct: 115 GLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFL 174

Query: 129 QVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQMQYRK 188
            V +GLWI S +G +FNFLTLVY   ++  + P++Y+K++D +D       + +Q QY  
Sbjct: 175 MVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVV 234

Query: 189 LDENVLRKLPLPLNKEK 206
            DE VL K+P+   K K
Sbjct: 235 FDEKVLSKIPIASLKAK 251

[Close]
BLAST of Cp4.1LG01g02500 vs. Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-34
Identity = 84/204 (41.18%), Postives = 126/204 (61.76%), Query Frame = 1 

Query: 9   RRISVHQVLGGGPVADMLLWK--KWCGGAVILTSTTALWYLFERADYNFLSFVANVLLLL 68
           R   VH+VLGGG  AD+ +WK  K  GG  +L   TA W +FE  +Y+ L+ + +V++++
Sbjct: 76  REQPVHKVLGGGKPADIFMWKNKKMSGG--VLGGATAAWVVFELMEYHLLTLLCHVMIVV 135

Query: 69  VLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNLKL 128
           + +LF+W+ +   +N+  P +P++ I EE +  +A  LR+ +N   S  R+IA GR+LK 
Sbjct: 136 LAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKK 195

Query: 129 FLQVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQ---DPIDEKLCVTHRYVQ 188
           FL    GLW+ S +G  FNFLTL Y  ++L  + PL YDKY+   DP+ EK  +    ++
Sbjct: 196 FLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIE---LK 255

Query: 189 MQYRKLDENVLRKLPL-PLNKEKK 207
            QY  LDE VL K+PL PL  +KK
Sbjct: 256 KQYAVLDEKVLSKIPLGPLKNKKK 274

[Close]
BLAST of Cp4.1LG01g02500 vs. Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.8e-33
Identity = 75/197 (38.07%), Postives = 124/197 (62.94%), Query Frame = 1 

Query: 9   RRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLLLLVL 68
           R+I+VHQ +GGG  AD+LLW++      ++  +T  W +FE +   FLS  ++VLL++++
Sbjct: 28  RQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIM 87

Query: 69  ILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNLKLFL 128
           I FV A+ ++  NR L  LP+L +SEE V+  A   R+ +N  L +A D+ +G + +LF 
Sbjct: 88  ISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFF 147

Query: 129 QVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQMQYRK 188
           +V + LW+ S IG + +  TL+Y G +LS++ P +Y KYQ  +D+     HR +   Y+ 
Sbjct: 148 KVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKI 207

Query: 189 LDENVLRKLPLPLNKEK 206
           +DENV+ +L   L+K+K
Sbjct: 208 VDENVISRLSWSLSKDK 224

[Close]
BLAST of Cp4.1LG01g02500 vs. TrEMBL
Match: A0A0A0L980_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_3G199610 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.6e-95
Identity = 182/206 (88.35%), Postives = 192/206 (93.20%), Query Frame = 1 

Query: 3   MGSNSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANV 62
           +GSNS+RRISVHQ LGGG VAD+LLWKKWCGG V+LTS TALWYLFERA YNFLSFVANV
Sbjct: 2   VGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANV 61

Query: 63  LLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGR 122
           LLLLV+ILF WAKSASLLNRPLPPLPDLEISEESVS+VA+ELR  +NFALSIARDIAIGR
Sbjct: 62  LLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGR 121

Query: 123 NLKLFLQVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYV 182
           NLKLFLQVAL LWI SFIG FFNFLTLVY GVLLSLSAP+VYDKYQD IDEKLCVTHRY 
Sbjct: 122 NLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYA 181

Query: 183 QMQYRKLDENVLRKLPLPLNKEKKMQ 209
           QMQYRKLDENVLRK+PLPLNKEKKMQ
Sbjct: 182 QMQYRKLDENVLRKIPLPLNKEKKMQ 207

[Close]
BLAST of Cp4.1LG01g02500 vs. TrEMBL
Match: A0A061E058_THECC (Reticulon-like protein OS=Theobroma cacao GN=TCM_007136 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.3e-83
Identity = 159/203 (78.33%), Postives = 179/203 (88.18%), Query Frame = 1 

Query: 5   SNSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLL 64
           SN   R+SVHQ LGGGPVAD+LLW+KWCGG V+L S T LWYLFERA YNFLSFVANVLL
Sbjct: 50  SNPIPRLSVHQALGGGPVADVLLWRKWCGGVVMLASATTLWYLFERAGYNFLSFVANVLL 109

Query: 65  LLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNL 124
           LLV+ILF WAKSASLLNRPLPPLP+LEISE++V  VADEL++W+N+ALSIA DIAIGRNL
Sbjct: 110 LLVVILFFWAKSASLLNRPLPPLPNLEISEKTVGKVADELQVWINYALSIAHDIAIGRNL 169

Query: 125 KLFLQVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQM 184
           KLFL+VA+GLW+ S+IG  FNFLTLVY GV+LSLS PLVYDKYQ  I+EKL VTHR +QM
Sbjct: 170 KLFLEVAVGLWLLSYIGSLFNFLTLVYIGVILSLSVPLVYDKYQHHINEKLSVTHRIIQM 229

Query: 185 QYRKLDENVLRKLPLPLNKEKKM 208
           QYRK+DE VLRKLPLP NKEKKM
Sbjct: 230 QYRKIDETVLRKLPLPSNKEKKM 252

[Close]
BLAST of Cp4.1LG01g02500 vs. TrEMBL
Match: D7UC00_VITVI (Reticulon-like protein OS=Vitis vinifera GN=VIT_03s0180g00170 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 6.9e-77
Identity = 143/204 (70.10%), Postives = 174/204 (85.29%), Query Frame = 1 

Query: 5   SNSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLL 64
           S+   RISVHQ LGGG VAD LLW++WCG AV L S ++LW+LFERA YN LSFVANV+L
Sbjct: 4   SDHPSRISVHQALGGGSVADFLLWRRWCGAAVCLVSASSLWFLFERAGYNLLSFVANVVL 63

Query: 65  LLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNL 124
           LLV+ILF+WAKSAS+LNRPLPPLPD+EISEESV   AD +R+W+N+ALS+ARDIA+GRN+
Sbjct: 64  LLVVILFLWAKSASILNRPLPPLPDMEISEESVVKAADVIRVWINYALSVARDIAVGRNV 123

Query: 125 KLFLQVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQM 184
           KLFLQVA GLW+ S+IG  FNFLTLVY GV+LSLS P++YDKYQD ID+KL VTHR VQ 
Sbjct: 124 KLFLQVAFGLWVVSYIGSLFNFLTLVYIGVVLSLSVPVLYDKYQDHIDDKLRVTHRVVQT 183

Query: 185 QYRKLDENVLRKLPLPLNKEKKMQ 209
           QY+K+D+ +LRK+P+P+N  KK Q
Sbjct: 184 QYKKIDDKILRKIPMPINMGKKTQ 207

[Close]
BLAST of Cp4.1LG01g02500 vs. TrEMBL
Match: W9S660_9ROSA (Reticulon-like protein OS=Morus notabilis GN=L484_027478 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.8e-75
Identity = 144/204 (70.59%), Postives = 171/204 (83.82%), Query Frame = 1 

Query: 5   SNSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLL 64
           S+ +RR SVHQ  G G VAD+LLWKKW  G V+L S TALW+LFERA YN LSFV+NVLL
Sbjct: 4   SSPSRRFSVHQAFGDGFVADVLLWKKWSVGVVLLVSATALWFLFERAGYNPLSFVSNVLL 63

Query: 65  LLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNL 124
           LLV+ILF WAKSASLLNRPLPPLPDLEISE SV + AD LR+WVN  +S ARDIAIGRN 
Sbjct: 64  LLVVILFFWAKSASLLNRPLPPLPDLEISEASVMMAADVLRVWVNRVMSTARDIAIGRNW 123

Query: 125 KLFLQVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQM 184
           KLFLQVA GLW++S++G  FNFLTL Y  VLLSLS P++YDKYQD ID+K+CVTH+ +Q 
Sbjct: 124 KLFLQVAFGLWVASYVGSLFNFLTLAYIAVLLSLSVPVLYDKYQDHIDDKVCVTHKLIQT 183

Query: 185 QYRKLDENVLRKLPLPLNKEKKMQ 209
           QYRK+DE++ +K+P+PLNKEKK+Q
Sbjct: 184 QYRKIDESLRKKIPIPLNKEKKVQ 207

[Close]
BLAST of Cp4.1LG01g02500 vs. TrEMBL
Match: A0A067F9F1_CITSI (Reticulon-like protein OS=Citrus sinensis GN=CISIN_1g0285691mg PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.9e-74
Identity = 145/204 (71.08%), Postives = 172/204 (84.31%), Query Frame = 1 

Query: 5   SNSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLL 64
           S+S  RISVHQ LGGG VAD+LLW+K CGG V+L S+T LW+LFERA YNFLSFV+NVLL
Sbjct: 4   SHSYDRISVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSNVLL 63

Query: 65  LLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNL 124
           LLV ILF W KSASLLNRPLPPLPDLEIS++SV   ADE+++WVN ALSIARDIA+GRNL
Sbjct: 64  LLVAILFFWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMGRNL 123

Query: 125 KLFLQVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQM 184
             FLQVA  LW+ S++G  FNFLTLVY GVLLSLS P++Y+K+QD IDEKLC   R +QM
Sbjct: 124 SRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQM 183

Query: 185 QYRKLDENVLRKLPLPLNKEKKMQ 209
           QYRK+DE++L+K+PLP NK+KK Q
Sbjct: 184 QYRKIDESLLKKIPLPQNKQKKTQ 207

[Close]
BLAST of Cp4.1LG01g02500 vs. TAIR10
Match: AT2G15280.1 (AT2G15280.1 Reticulon family protein)

HSP 1 Score: 218.0 bits (554), Expect = 5.5e-57
Identity = 110/198 (55.56%), Postives = 148/198 (74.75%), Query Frame = 1 

Query: 12  SVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLLLLVLILF 71
           SVHQ +  G VAD+++WK   GG ++L STT LW+LFE+  Y+F  FV N  LL V+ILF
Sbjct: 4   SVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILF 63

Query: 72  VWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNLKLFLQVA 131
           +WAKSA L NRP+P LP+LEI+EE V +VAD +R+W+N  L++AR+I +GRN K   +V+
Sbjct: 64  LWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVS 123

Query: 132 LGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQMQYRKLDE 191
           + LW  SF+G F NFLT++Y GV+LSL  P +Y++YQD IDEKL +THR +Q QYRK+DE
Sbjct: 124 VVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDE 183

Query: 192 NVLRK-LPLPLNKEKKMQ 209
            +L+K +  P NK KKMQ
Sbjct: 184 RLLQKIIAKPTNKIKKMQ 201

[Close]
BLAST of Cp4.1LG01g02500 vs. TAIR10
Match: AT3G19460.2 (AT3G19460.2 Reticulon family protein)

HSP 1 Score: 184.9 bits (468), Expect = 5.1e-47
Identity = 110/221 (49.77%), Postives = 140/221 (63.35%), Query Frame = 1 

Query: 22  VADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLLLLVLILFVWAKSASLLN 81
           VAD+LLW+   G  ++L S+T  W+LFERA YN LSFV+NVLLLLV I F+WAKSA++LN
Sbjct: 6   VADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLN 65

Query: 82  RPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRN------------------ 141
           RPLPP+P++EI EE  +  AD+LR+W+N+ LSIA DI I RN                  
Sbjct: 66  RPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLWQTICC 125

Query: 142 LKLFLQVA-LGLWIS---------------SFIGRFFNFLTLVYFGVLLSLSAPLVYDKY 201
           + LFL V  L + IS               S++G   N LTLVY GVLLSLS P+VY+KY
Sbjct: 126 IFLFLHVMYLTVHISFVFAVKQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKY 185

Query: 202 QDPIDEKLCVTHRYVQMQYRKLDENVLRKLPLPLNKEKKMQ 209
           QD IDEK+  T ++V+        N+ RK PLP+NKEKK Q
Sbjct: 186 QDHIDEKVNSTSKFVR--------NISRKFPLPINKEKKHQ 218

[Close]
BLAST of Cp4.1LG01g02500 vs. TAIR10
Match: AT2G46170.1 (AT2G46170.1 Reticulon family protein)

HSP 1 Score: 147.5 bits (371), Expect = 9.0e-36
Identity = 79/197 (40.10%), Postives = 122/197 (61.93%), Query Frame = 1 

Query: 9   RRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLLLLVL 68
           R   VH+VLGGG  AD+ LW+       +L   TA+W LFE  +Y+ LS + ++ +L + 
Sbjct: 55  REKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALG 114

Query: 69  ILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNLKLFL 128
            LF+W+ + +L+N+  P +P++ + EE+  +VA  LR  +N A  I R IA+GR+LK FL
Sbjct: 115 GLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFL 174

Query: 129 QVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQMQYRK 188
            V +GLWI S +G +FNFLTLVY   ++  + P++Y+K++D +D       + +Q QY  
Sbjct: 175 MVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVV 234

Query: 189 LDENVLRKLPLPLNKEK 206
            DE VL K+P+   K K
Sbjct: 235 FDEKVLSKIPIASLKAK 251

[Close]
BLAST of Cp4.1LG01g02500 vs. TAIR10
Match: AT4G23630.1 (AT4G23630.1 VIRB2-interacting protein 1)

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-35
Identity = 84/204 (41.18%), Postives = 126/204 (61.76%), Query Frame = 1 

Query: 9   RRISVHQVLGGGPVADMLLWK--KWCGGAVILTSTTALWYLFERADYNFLSFVANVLLLL 68
           R   VH+VLGGG  AD+ +WK  K  GG  +L   TA W +FE  +Y+ L+ + +V++++
Sbjct: 76  REQPVHKVLGGGKPADIFMWKNKKMSGG--VLGGATAAWVVFELMEYHLLTLLCHVMIVV 135

Query: 69  VLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNLKL 128
           + +LF+W+ +   +N+  P +P++ I EE +  +A  LR+ +N   S  R+IA GR+LK 
Sbjct: 136 LAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKK 195

Query: 129 FLQVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQ---DPIDEKLCVTHRYVQ 188
           FL    GLW+ S +G  FNFLTL Y  ++L  + PL YDKY+   DP+ EK  +    ++
Sbjct: 196 FLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIE---LK 255

Query: 189 MQYRKLDENVLRKLPL-PLNKEKK 207
            QY  LDE VL K+PL PL  +KK
Sbjct: 256 KQYAVLDEKVLSKIPLGPLKNKKK 274

[Close]
BLAST of Cp4.1LG01g02500 vs. TAIR10
Match: AT5G41600.1 (AT5G41600.1 VIRB2-interacting protein 3)

HSP 1 Score: 134.8 bits (338), Expect = 6.1e-32
Identity = 78/204 (38.24%), Postives = 125/204 (61.27%), Query Frame = 1 

Query: 9   RRISVHQVLGGGPVADMLLW--KKWCGGAVILTSTTALWYLFERADYNFLSFVANVLLLL 68
           R   VH+VLGGG  AD+ LW  KK  GG  +L + TA W LFE  +Y+ L+F+ +  +  
Sbjct: 55  REKPVHKVLGGGKPADIFLWRNKKVSGG--VLGAVTASWVLFELFEYHLLAFLCHFAIFA 114

Query: 69  VLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNLKL 128
           +  LF+W+ + + +++  P +P++ I E+ +  +   LR+ +N  L++ R+IA G+++K 
Sbjct: 115 LAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKK 174

Query: 129 FLQVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQMQY 188
           F+ V  GLW+ S IG  +NFLTL Y   +L  + P++Y+KY+D +D       R ++ QY
Sbjct: 175 FILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQY 234

Query: 189 RKLDENVLRKL--PLP---LNKEK 206
             LDE VLRK+   +P   LNK+K
Sbjct: 235 AVLDEKVLRKVISKIPRGALNKKK 256

[Close]
BLAST of Cp4.1LG01g02500 vs. NCBI nr
Match: gi|659112323|ref|XP_008456165.1| (PREDICTED: reticulon-like protein B11 isoform X1 [Cucumis melo])

HSP 1 Score: 360.1 bits (923), Expect = 2.5e-96
Identity = 183/206 (88.83%), Postives = 193/206 (93.69%), Query Frame = 1 

Query: 3   MGSNSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANV 62
           +GSNS+RRISVHQ LGGG VAD+LLWKKWCGG V+LTS TALWYLFERA YNFLSFVANV
Sbjct: 2   VGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANV 61

Query: 63  LLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGR 122
           LLLLV+ILF WAKSASLLNRPLPPLPDLEISEESVS+VA+ELR W+NFALSIARDIAIGR
Sbjct: 62  LLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFWINFALSIARDIAIGR 121

Query: 123 NLKLFLQVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYV 182
           NLKLFLQVAL LWI SFIG FFNFLTLVY GVLLSLSAP+VYDKYQD IDEKLCVTHRY 
Sbjct: 122 NLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYA 181

Query: 183 QMQYRKLDENVLRKLPLPLNKEKKMQ 209
           QMQYRKLDENVLRK+PLPLNKEKKMQ
Sbjct: 182 QMQYRKLDENVLRKIPLPLNKEKKMQ 207

[Close]
BLAST of Cp4.1LG01g02500 vs. NCBI nr
Match: gi|778680027|ref|XP_004140714.2| (PREDICTED: reticulon-like protein B11 [Cucumis sativus])

HSP 1 Score: 355.1 bits (910), Expect = 8.1e-95
Identity = 182/206 (88.35%), Postives = 192/206 (93.20%), Query Frame = 1 

Query: 3   MGSNSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANV 62
           +GSNS+RRISVHQ LGGG VAD+LLWKKWCGG V+LTS TALWYLFERA YNFLSFVANV
Sbjct: 2   VGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANV 61

Query: 63  LLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGR 122
           LLLLV+ILF WAKSASLLNRPLPPLPDLEISEESVS+VA+ELR  +NFALSIARDIAIGR
Sbjct: 62  LLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGR 121

Query: 123 NLKLFLQVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYV 182
           NLKLFLQVAL LWI SFIG FFNFLTLVY GVLLSLSAP+VYDKYQD IDEKLCVTHRY 
Sbjct: 122 NLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYA 181

Query: 183 QMQYRKLDENVLRKLPLPLNKEKKMQ 209
           QMQYRKLDENVLRK+PLPLNKEKKMQ
Sbjct: 182 QMQYRKLDENVLRKIPLPLNKEKKMQ 207

[Close]
BLAST of Cp4.1LG01g02500 vs. NCBI nr
Match: gi|590686937|ref|XP_007042524.1| (Reticulon family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 317.4 bits (812), Expect = 1.9e-83
Identity = 159/203 (78.33%), Postives = 179/203 (88.18%), Query Frame = 1 

Query: 5   SNSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLL 64
           SN   R+SVHQ LGGGPVAD+LLW+KWCGG V+L S T LWYLFERA YNFLSFVANVLL
Sbjct: 50  SNPIPRLSVHQALGGGPVADVLLWRKWCGGVVMLASATTLWYLFERAGYNFLSFVANVLL 109

Query: 65  LLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNL 124
           LLV+ILF WAKSASLLNRPLPPLP+LEISE++V  VADEL++W+N+ALSIA DIAIGRNL
Sbjct: 110 LLVVILFFWAKSASLLNRPLPPLPNLEISEKTVGKVADELQVWINYALSIAHDIAIGRNL 169

Query: 125 KLFLQVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQM 184
           KLFL+VA+GLW+ S+IG  FNFLTLVY GV+LSLS PLVYDKYQ  I+EKL VTHR +QM
Sbjct: 170 KLFLEVAVGLWLLSYIGSLFNFLTLVYIGVILSLSVPLVYDKYQHHINEKLSVTHRIIQM 229

Query: 185 QYRKLDENVLRKLPLPLNKEKKM 208
           QYRK+DE VLRKLPLP NKEKKM
Sbjct: 230 QYRKIDETVLRKLPLPSNKEKKM 252

[Close]
BLAST of Cp4.1LG01g02500 vs. NCBI nr
Match: gi|225428904|ref|XP_002285375.1| (PREDICTED: reticulon-like protein B11 [Vitis vinifera])

HSP 1 Score: 295.0 bits (754), Expect = 9.9e-77
Identity = 143/204 (70.10%), Postives = 174/204 (85.29%), Query Frame = 1 

Query: 5   SNSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLL 64
           S+   RISVHQ LGGG VAD LLW++WCG AV L S ++LW+LFERA YN LSFVANV+L
Sbjct: 4   SDHPSRISVHQALGGGSVADFLLWRRWCGAAVCLVSASSLWFLFERAGYNLLSFVANVVL 63

Query: 65  LLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNL 124
           LLV+ILF+WAKSAS+LNRPLPPLPD+EISEESV   AD +R+W+N+ALS+ARDIA+GRN+
Sbjct: 64  LLVVILFLWAKSASILNRPLPPLPDMEISEESVVKAADVIRVWINYALSVARDIAVGRNV 123

Query: 125 KLFLQVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQM 184
           KLFLQVA GLW+ S+IG  FNFLTLVY GV+LSLS P++YDKYQD ID+KL VTHR VQ 
Sbjct: 124 KLFLQVAFGLWVVSYIGSLFNFLTLVYIGVVLSLSVPVLYDKYQDHIDDKLRVTHRVVQT 183

Query: 185 QYRKLDENVLRKLPLPLNKEKKMQ 209
           QY+K+D+ +LRK+P+P+N  KK Q
Sbjct: 184 QYKKIDDKILRKIPMPINMGKKTQ 207

[Close]
BLAST of Cp4.1LG01g02500 vs. NCBI nr
Match: gi|645261606|ref|XP_008236373.1| (PREDICTED: reticulon-like protein B11 [Prunus mume])

HSP 1 Score: 290.8 bits (743), Expect = 1.9e-75
Identity = 148/200 (74.00%), Postives = 169/200 (84.50%), Query Frame = 1 

Query: 9   RRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFVANVLLLLVL 68
           RRISVHQ LGGGPVAD+LLWKKW GG ++LTST A W+LFERA YN LSFVANVLLLLV+
Sbjct: 8   RRISVHQALGGGPVADVLLWKKWSGGVLLLTSTAASWFLFERAGYNLLSFVANVLLLLVV 67

Query: 69  ILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIAIGRNLKLFL 128
           ILF+WAKSASLLNRPLPPLPD+EISE SV   AD L  W+N  LSIARDIAIGRN KLFL
Sbjct: 68  ILFLWAKSASLLNRPLPPLPDMEISEASVVKAADALHAWINRVLSIARDIAIGRNWKLFL 127

Query: 129 QVALGLWISSFIGRFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTHRYVQMQYRK 188
           QVA  LW+ S+IG FFNFLTLVY GV+LSLS P+VYDKYQ  IDEKL V +R +Q QYRK
Sbjct: 128 QVAFCLWLVSYIGSFFNFLTLVYIGVVLSLSVPVVYDKYQGHIDEKLLVANRVIQTQYRK 187

Query: 189 LDENVLRKLPLPLNKEKKMQ 209
           +D+++L+K+PL  NKEKK+Q
Sbjct: 188 IDDSILKKIPLRSNKEKKVQ 207

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g02500 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RTNLK_ARATH1.6e-5858.13Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1[more]
RTNLJ_ARATH9.7e-5655.56Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1[more]
RTNLE_ARATH1.6e-3440.10Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1[more]
RTNLA_ARATH2.1e-3441.18Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1[more]
RTNLP_ARATH1.8e-3338.07Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1[more]
BLAST of Cp4.1LG01g02500 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L980_CUCSA5.6e-9588.35Reticulon-like protein OS=Cucumis sativus GN=Csa_3G199610 PE=4 SV=1[more]
A0A061E058_THECC1.3e-8378.33Reticulon-like protein OS=Theobroma cacao GN=TCM_007136 PE=4 SV=1[more]
D7UC00_VITVI6.9e-7770.10Reticulon-like protein OS=Vitis vinifera GN=VIT_03s0180g00170 PE=4 SV=1[more]
W9S660_9ROSA3.8e-7570.59Reticulon-like protein OS=Morus notabilis GN=L484_027478 PE=4 SV=1[more]
A0A067F9F1_CITSI1.9e-7471.08Reticulon-like protein OS=Citrus sinensis GN=CISIN_1g0285691mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g02500 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G15280.15.5e-5755.56 Reticulon family protein[more]
AT3G19460.25.1e-4749.77 Reticulon family protein[more]
AT2G46170.19.0e-3640.10 Reticulon family protein[more]
AT4G23630.11.2e-3541.18 VIRB2-interacting protein 1[more]
AT5G41600.16.1e-3238.24 VIRB2-interacting protein 3[more]
BLAST of Cp4.1LG01g02500 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659112323|ref|XP_008456165.1|2.5e-9688.83PREDICTED: reticulon-like protein B11 isoform X1 [Cucumis melo][more]
gi|778680027|ref|XP_004140714.2|8.1e-9588.35PREDICTED: reticulon-like protein B11 [Cucumis sativus][more]
gi|590686937|ref|XP_007042524.1|1.9e-8378.33Reticulon family protein isoform 1 [Theobroma cacao][more]
gi|225428904|ref|XP_002285375.1|9.9e-7770.10PREDICTED: reticulon-like protein B11 [Vitis vinifera][more]
gi|645261606|ref|XP_008236373.1|1.9e-7574.00PREDICTED: reticulon-like protein B11 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003388Reticulon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g02500.1Cp4.1LG01g02500.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003388ReticulonPFAMPF02453Reticuloncoord: 22..175
score: 3.0
IPR003388ReticulonPROFILEPS50845RETICULONcoord: 22..208
score: 37
NoneNo IPR availablePANTHERPTHR10994RETICULONcoord: 8..208
score: 1.1E
NoneNo IPR availablePANTHERPTHR10994:SF77RETICULON-LIKE PROTEIN B10-RELATEDcoord: 8..208
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g02500Cucsa.244630Cucumber (Gy14) v1cgycpeB0654
Cp4.1LG01g02500CmaCh16G003440Cucurbita maxima (Rimu)cmacpeB351
Cp4.1LG01g02500CmaCh04G004730Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g02500CmoCh04G005070Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g02500Cla013096Watermelon (97103) v1cpewmB433
Cp4.1LG01g02500Csa3G199610Cucumber (Chinese Long) v2cpecuB389
Cp4.1LG01g02500MELO3C019545Melon (DHL92) v3.5.1cpemeB412
Cp4.1LG01g02500ClCG05G010270Watermelon (Charleston Gray)cpewcgB394
Cp4.1LG01g02500CSPI03G18160Wild cucumber (PI 183967)cpecpiB388
Cp4.1LG01g02500Lsi05G002360Bottle gourd (USVL1VR-Ls)cpelsiB369
Cp4.1LG01g02500MELO3C019545.2Melon (DHL92) v3.6.1cpemedB481
Cp4.1LG01g02500CsaV3_3G018220Cucumber (Chinese Long) v3cpecucB0484
Cp4.1LG01g02500Bhi01G001280Wax gourdcpewgoB0517
Cp4.1LG01g02500CsGy3G018050Cucumber (Gy14) v2cgybcpeB362
Cp4.1LG01g02500Carg08144Silver-seed gourdcarcpeB0527
Cp4.1LG01g02500Carg19666Silver-seed gourdcarcpeB0408
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g02500Cucurbita pepo (Zucchini)cpecpeB234
Cp4.1LG01g02500Cucurbita pepo (Zucchini)cpecpeB400
Cp4.1LG01g02500Cucumber (Gy14) v1cgycpeB0218
Cp4.1LG01g02500Cucumber (Gy14) v1cgycpeB0599
Cp4.1LG01g02500Cucurbita maxima (Rimu)cmacpeB136
Cp4.1LG01g02500Cucurbita moschata (Rifu)cmocpeB114
Cp4.1LG01g02500Cucurbita moschata (Rifu)cmocpeB311
Cp4.1LG01g02500Cucurbita moschata (Rifu)cmocpeB815
Cp4.1LG01g02500Wild cucumber (PI 183967)cpecpiB470
Cp4.1LG01g02500Cucumber (Chinese Long) v2cpecuB468
Cp4.1LG01g02500Cucumber (Chinese Long) v2cpecuB470
Cp4.1LG01g02500Bottle gourd (USVL1VR-Ls)cpelsiB325
Cp4.1LG01g02500Bottle gourd (USVL1VR-Ls)cpelsiB348
Cp4.1LG01g02500Watermelon (Charleston Gray)cpewcgB378
Cp4.1LG01g02500Watermelon (97103) v1cpewmB453
Cp4.1LG01g02500Melon (DHL92) v3.5.1cpemeB394
Cp4.1LG01g02500Melon (DHL92) v3.5.1cpemeB435
Cp4.1LG01g02500Cucumber (Gy14) v2cgybcpeB213
Cp4.1LG01g02500Cucumber (Gy14) v2cgybcpeB515
Cp4.1LG01g02500Cucumber (Gy14) v2cgybcpeB805
Cp4.1LG01g02500Cucumber (Gy14) v2cgybcpeB942
Cp4.1LG01g02500Melon (DHL92) v3.6.1cpemedB457
Cp4.1LG01g02500Melon (DHL92) v3.6.1cpemedB472
Cp4.1LG01g02500Melon (DHL92) v3.6.1cpemedB492
Cp4.1LG01g02500Melon (DHL92) v3.6.1cpemedB507
Cp4.1LG01g02500Cucumber (Chinese Long) v3cpecucB0481
Cp4.1LG01g02500Cucumber (Chinese Long) v3cpecucB0511
Cp4.1LG01g02500Cucumber (Chinese Long) v3cpecucB0576
Cp4.1LG01g02500Cucumber (Chinese Long) v3cpecucB0582
Cp4.1LG01g02500Wax gourdcpewgoB0524
Cp4.1LG01g02500Wax gourdcpewgoB0539
Cp4.1LG01g02500Wax gourdcpewgoB0547
Cp4.1LG01g02500Wax gourdcpewgoB0580