Carg19666 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19666
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Reticulon-like protein
Location	Cucurbita_argyrosperma_scaffold_133 : 50804 .. 53177 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTTGGCGGAGAATTCTTTGTTTCAGTTCTGCAATCTTCATCCTTTTCTCTGCTTTCAATTTCGTTTTCTATTTTCTCTCAAGCCCTAGCCATGTCCATGGTAGGACCTAATCCTTCTCGTCGCATTTCTGTCCATCAAGCGCTCGGCGGTGGTCAAGGTACTTTCTGTCTCTGTTCTGCCGTGTTTTGCGATCTTTTCGATTTTCGAATTGGTGCCTACATTGATGATTTAGTATTCCCTCCTTGATCTGGGCTTAATTCTTTGATGTTTCGGAAGGGAATTGTTTTGGTCTAATGGCATTTGATTGCAATTTGTACCTGGATTATATGTTTCACTGGGTTGATTCTTTGGGAAATGTTACGATCTTCTTTTTTTTTTTTTTTTTGAATTTGCTGATCTTGTTGTATTCTATTGAGGATATGGCTGGTTTGCTAATCTAGTTATTGATGATAGTGGCTGATTTGCTGTTATGGAATAAATGGTATGGTGGGGTGGTGACGCTCACGTCTGCAACTTCTTTCTGGTACCTGTTTGAAAGAGCCGGTTACAACTTCTTATCTTTTGTCGCCAATGTTCTATTGCTTCTTGTCCTCATTATTTTTTTCTGGGCCAAATCTGCTTCCCTTCTCAATAGGTACTTTGATTCCCCTTCTTCCAGCTTTCAGTGTTTAACATTTCTTGGGTCGAAGTCTGTGGAGAGTTTATGGTTTTTTGACGATGATGAATCAAAAGTAAATAATATACATTGTAAGAGAGGAACCATTTCATCGTACCAACCTGAGCATAGCTTGTTTAGATGGTAATTCTCCGGATTTCAAATAAATATTTCAATACAAACTTGGGATTTTTTGAATTTGAAGAGAATACCATATTTTTAATTTGTTGTTAGAAAAGTAAGTATGTGGATTTTTCGAGATAATATTACTTAGATTGACTTGATTTTGGTTAGTTCTGATCAAATATTCACATTCTCAATGTATGAATTGAAATCGACCTAGAGTTAAAGTTACCTTCCTTTGTGATTCAGACCTCTACCTCCGCTTCCTGATCTGGAAATTTCTGAGGAAACTGTTTCAGTGGTTGCTGATGAACTGCGACTGTGGGTCAATTTTGTACTGTCAATTGCACGTGATATTGCAATAGGCAGAAACTTTAAGCTCTTTCTTCAGGTTAGGGATCATCATTTGTGTCTTTGTCTGTAATAACTGGGACTTGTGAGTTAATTAAATCATGATCTCAGGTTGCTCTTGGACTGTGGATTGTGTCATTCATTGGCAGTTTCTTCAATTTTCTTACACTGGTTTATATTGGTGAGTTTTGTGGGGCACTCATTTCTTTGTAATCAGCAGTTCAAGTATGATAGCTGTTGTTTTCTGAAACAGTTTATGCATTTTATCAATATATTTTTGCAGGTATCCTTCTCAGTCTTTCCGCTCCTTTAGTGTATGATAAGTATCAGGATCACATCAATGAAAAGTTATGTGTAGCACATAGATACGTACAGATGCAATACAGGATGCTTAACGAGAATGTTCTAAGGAAGTTACCATTACCCTTAAATAAGGAGAAGAAGATGCAATAGGCATAGTACCTAACTCGATGATGAGTAACTTCACAAGAAGTGAGCTGGATTACATTTTTCATAATGTTTAACTCCATTTTTGTATTCTGACGTGAACTGTAAATATTATTTCAGATCAACATATTGATTATTATGTACTGATATTGTAATGTCTTGTTATTTGTTCACTTTTTTGTTTTTTCTTTCCTTAAATCATCAGTTCATTTCTTTCTGTTGTAATCTAAATGTCACCTACTCTTGATGAAGGATTGTTAGATCTTGAAATTTGTGAATAACTTCTGGTAGCTTGTGAAAGTTTACTACTTAATTTTTTATGTTCTACATATTAACATCTCATAAGATTTCACAAAATTCTGATCGCTTAGTTTTCCACTTTTTATCTGACTTAACAGCCGATTAATATATTATATTTCAAATTTTCATATTTTATCTGACTTTCTTTGGTTTTCCTTGTTGCTACTTTGAAGTATGCAGGGGCAGATTGGCTGGCTTTTTCAACAGGATGATCAGTATATCTGAAGATTTTGATCAGAGGCATTGAGATTGCTTCTAAAAGCGATGTACTTCAGAATTCTAGATCTCTTAGAAAGTTGTGGTATATAGTTTAACATAGATGTATTCCGACTTTGACTTCGGGTGAAAACTGAAATCAATATTGTTTGATTTTGCTTGGCTACTTCGGTTTCACACTCTGGGTTCTGTAATTTTGATTTTGGCAATTATCCTTTGTTATTTGAACTAAATGAAAATAAATTTGCATAGGTTAGAAGCTTTCTTCAACTTTTGCAA

mRNA sequence

AATTTTGGCGGAGAATTCTTTGTTTCAGTTCTGCAATCTTCATCCTTTTCTCTGCTTTCAATTTCGTTTTCTATTTTCTCTCAAGCCCTAGCCATGTCCATGGTAGGACCTAATCCTTCTCGTCGCATTTCTGTCCATCAAGCGCTCGGCGGTGGTCAAGTGGCTGATTTGCTGTTATGGAATAAATGGTATGGTGGGGTGGTGACGCTCACGTCTGCAACTTCTTTCTGGTACCTGTTTGAAAGAGCCGGTTACAACTTCTTATCTTTTGTCGCCAATGTTCTATTGCTTCTTGTCCTCATTATTTTTTTCTGGGCCAAATCTGCTTCCCTTCTCAATAGACCTCTACCTCCGCTTCCTGATCTGGAAATTTCTGAGGAAACTGTTTCAGTGGTTGCTGATGAACTGCGACTGTGGGTCAATTTTGTACTGTCAATTGCACGTGATATTGCAATAGGCAGAAACTTTAAGCTCTTTCTTCAGGTTGCTCTTGGACTGTGGATTGTGTCATTCATTGGCAGTTTCTTCAATTTTCTTACACTGGTTTATATTGGTATCCTTCTCAGTCTTTCCGCTCCTTTAGTGTATGATAAGTATCAGGATCACATCAATGAAAAGTTATGTGTAGCACATAGATACGTACAGATGCAATACAGGATGCTTAACGAGAATGTTCTAAGGAAGTTACCATTACCCTTAAATAAGGAGAAGAAGATGCAATAGGCATAGTACCTAACTCGATGATGAGTAACTTCACAAGAAGTGAGCTGGATTACATTTTTCATAATGTTTAACTCCATTTTTGTATTCTGACGTGAACTGTAAATATTATTTCAGATCAACATATTGATTATTATGTACTGATATTGTAATGTCTTGTTATTTGTTCACTTTTTTGTTTTTTCTTTCCTTAAATCATCAGTTCATTTCTTTCTGTTGTAATCTAAATGTCACCTACTCTTGATGAAGGATTGTTAGATCTTGAAATTTGTGAATAACTTCTGGTAGCTTGTGAAAGTTTACTACTTAATTTTTTATGTTCTACATATTAACATCTCATAAGATTTCACAAAATTCTGATCGCTTAGTTTTCCACTTTTTATCTGACTTAACAGCCGATTAATATATTATATTTCAAATTTTCATATTTTATCTGACTTTCTTTGGTTTTCCTTGTTGCTACTTTGAAGTATGCAGGGGCAGATTGGCTGGCTTTTTCAACAGGATGATCAGTATATCTGAAGATTTTGATCAGAGGCATTGAGATTGCTTCTAAAAGCGATGTACTTCAGAATTCTAGATCTCTTAGAAAGTTGTGGTATATAGTTTAACATAGATGTATTCCGACTTTGACTTCGGGTGAAAACTGAAATCAATATTGTTTGATTTTGCTTGGCTACTTCGGTTTCACACTCTGGGTTCTGTAATTTTGATTTTGGCAATTATCCTTTGTTATTTGAACTAAATGAAAATAAATTTGCATAGGTTAGAAGCTTTCTTCAACTTTTGCAA

Coding sequence (CDS)

AATTTTGGCGGAGAATTCTTTGTTTCAGTTCTGCAATCTTCATCCTTTTCTCTGCTTTCAATTTCGTTTTCTATTTTCTCTCAAGCCCTAGCCATGTCCATGGTAGGACCTAATCCTTCTCGTCGCATTTCTGTCCATCAAGCGCTCGGCGGTGGTCAAGTGGCTGATTTGCTGTTATGGAATAAATGGTATGGTGGGGTGGTGACGCTCACGTCTGCAACTTCTTTCTGGTACCTGTTTGAAAGAGCCGGTTACAACTTCTTATCTTTTGTCGCCAATGTTCTATTGCTTCTTGTCCTCATTATTTTTTTCTGGGCCAAATCTGCTTCCCTTCTCAATAGACCTCTACCTCCGCTTCCTGATCTGGAAATTTCTGAGGAAACTGTTTCAGTGGTTGCTGATGAACTGCGACTGTGGGTCAATTTTGTACTGTCAATTGCACGTGATATTGCAATAGGCAGAAACTTTAAGCTCTTTCTTCAGGTTGCTCTTGGACTGTGGATTGTGTCATTCATTGGCAGTTTCTTCAATTTTCTTACACTGGTTTATATTGGTATCCTTCTCAGTCTTTCCGCTCCTTTAGTGTATGATAAGTATCAGGATCACATCAATGAAAAGTTATGTGTAGCACATAGATACGTACAGATGCAATACAGGATGCTTAACGAGAATGTTCTAAGGAAGTTACCATTACCCTTAAATAAGGAGAAGAAGATGCAATAG

Protein sequence

NFGGEFFVSVLQSSSFSLLSISFSIFSQALAMSMVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFVANVLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIGRNFKLFLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAHRYVQMQYRMLNENVLRKLPLPLNKEKKMQ

Homology

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BLAST of Carg19666 vs. NCBI nr
Match: XP_022922945.1 (reticulon-like protein B11 [Cucurbita moschata])

HSP 1 Score: 405.2 bits (1040), Expect = 1.5e-109
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 32  MSMVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFV 91
           MSMVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFV
Sbjct: 1   MSMVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFV 60

Query: 92  ANVLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIA 151
           ANVLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIA
Sbjct: 61  ANVLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIA 120

Query: 152 IGRNFKLFLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAH 211
           IGRNFKLFLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAH
Sbjct: 121 IGRNFKLFLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAH 180

Query: 212 RYVQMQYRMLNENVLRKLPLPLNKEKKMQ 241
           RYVQMQYRMLNENVLRKLPLPLNKEKKMQ
Sbjct: 181 RYVQMQYRMLNENVLRKLPLPLNKEKKMQ 209

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BLAST of Carg19666 vs. NCBI nr
Match: XP_023552758.1 (reticulon-like protein B11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.1 bits (1032), Expect = 1.3e-108
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 32  MSMVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFV 91
           MSMVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFV
Sbjct: 1   MSMVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFV 60

Query: 92  ANVLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIA 151
           ANVLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVN VLSIARDIA
Sbjct: 61  ANVLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNSVLSIARDIA 120

Query: 152 IGRNFKLFLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAH 211
           IGRNFKLFLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAH
Sbjct: 121 IGRNFKLFLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAH 180

Query: 212 RYVQMQYRMLNENVLRKLPLPLNKEKKMQ 241
           RYVQMQYRMLNENVLRKLPLPLNKEKKMQ
Sbjct: 181 RYVQMQYRMLNENVLRKLPLPLNKEKKMQ 209

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BLAST of Carg19666 vs. NCBI nr
Match: XP_022984805.1 (reticulon-like protein B11 isoform X2 [Cucurbita maxima])

HSP 1 Score: 398.7 bits (1023), Expect = 1.4e-107
Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 32  MSMVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFV 91
           MSMVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVV LT+ATSFWYLFERAGYNFLSFV
Sbjct: 1   MSMVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVVMLTTATSFWYLFERAGYNFLSFV 60

Query: 92  ANVLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIA 151
           ANVLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIA
Sbjct: 61  ANVLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIA 120

Query: 152 IGRNFKLFLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAH 211
           IGRNFKLFLQVALGLW VSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAH
Sbjct: 121 IGRNFKLFLQVALGLWFVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAH 180

Query: 212 RYVQMQYRMLNENVLRKLPLPLNKEKKMQ 241
           RYVQMQYRM NENVLRKLPLPLNKEKKMQ
Sbjct: 181 RYVQMQYRMFNENVLRKLPLPLNKEKKMQ 209

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BLAST of Carg19666 vs. NCBI nr
Match: XP_022941946.1 (reticulon-like protein B11 [Cucurbita moschata] >XP_022941947.1 reticulon-like protein B11 [Cucurbita moschata])

HSP 1 Score: 345.1 bits (884), Expect = 1.9e-91
Identity = 180/209 (86.12%), Postives = 189/209 (90.43%), Query Frame = 0


Query: 32  MSMVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFV 91
           MSM G   +RRISVHQ LGGG VAD+LLW KW GG V LTS T+ WYLFERAGYNFLSFV
Sbjct: 1   MSM-GSTSTRRISVHQVLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERAGYNFLSFV 60

Query: 92  ANVLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIA 151
           ANVLLLLVLI+F WAKSASLLNRPLPPLPDLEISEE+VS+VADELRLWVNF LSIARDIA
Sbjct: 61  ANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIA 120

Query: 152 IGRNFKLFLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAH 211
           IGRN KLFLQVALGLWI SFIGSFFNFLTLVY G+LLSLSAPLVYDKYQD I+EKLCV H
Sbjct: 121 IGRNLKLFLQVALGLWISSFIGSFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTH 180

Query: 212 RYVQMQYRMLNENVLRKLPLPLNKEKKMQ 241
           RYVQMQYR L+ENVLRKLPLPLNKEKKMQ
Sbjct: 181 RYVQMQYRKLDENVLRKLPLPLNKEKKMQ 208

[Close]

BLAST of Carg19666 vs. NCBI nr
Match: XP_022982758.1 (reticulon-like protein B11 [Cucurbita maxima] >XP_022982772.1 reticulon-like protein B11 [Cucurbita maxima])

HSP 1 Score: 344.4 bits (882), Expect = 3.2e-91
Identity = 180/209 (86.12%), Postives = 189/209 (90.43%), Query Frame = 0


Query: 32  MSMVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFV 91
           MSM G N +RRISVHQ LGGG VAD+LLW KW GG V LTS T+ WYLFERA YNFLSFV
Sbjct: 1   MSM-GSNSTRRISVHQMLGGGPVADMLLWKKWCGGAVILTSTTALWYLFERADYNFLSFV 60

Query: 92  ANVLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIA 151
           ANVLLLLVLI+F WAKSASLLNRPLPPLPDLEISEE+VS+VADELRLWVNF LSIARDIA
Sbjct: 61  ANVLLLLVLILFVWAKSASLLNRPLPPLPDLEISEESVSIVADELRLWVNFALSIARDIA 120

Query: 152 IGRNFKLFLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAH 211
           IGRN KLFLQVALGLWI SFIGSFFNFLTLVY G+LLSLSAPLVYDKYQD I+EKLCV H
Sbjct: 121 IGRNLKLFLQVALGLWISSFIGSFFNFLTLVYFGVLLSLSAPLVYDKYQDPIDEKLCVTH 180

Query: 212 RYVQMQYRMLNENVLRKLPLPLNKEKKMQ 241
           RYVQMQYR L+ENVLRKLPLPLNKEKKMQ
Sbjct: 181 RYVQMQYRKLDENVLRKLPLPLNKEKKMQ 208

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BLAST of Carg19666 vs. TAIR10
Match: AT2G15280.1 (Reticulon family protein)

HSP 1 Score: 209.5 bits (532), Expect = 2.2e-54
Identity = 105/198 (53.03%), Postives = 147/198 (74.24%), Query Frame = 0


Query: 44  SVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFVANVLLLLVLIIF 103
           SVHQ++  G VADL++W    GG + L S T  W+LFE+ GY+F  FV N  LL V+I+F
Sbjct: 4   SVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILF 63

Query: 104 FWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIGRNFKLFLQVA 163
            WAKSA L NRP+P LP+LEI+EE V +VAD +R+W+N VL++AR+I +GRN K   +V+
Sbjct: 64  LWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVS 123

Query: 164 LGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAHRYVQMQYRMLNE 223
           + LW VSF+G+F NFLT++Y+G++LSL  P +Y++YQD I+EKL + HR +Q QYR ++E
Sbjct: 124 VVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDE 183

Query: 224 NVLRK-LPLPLNKEKKMQ 241
            +L+K +  P NK KKMQ
Sbjct: 184 RLLQKIIAKPTNKIKKMQ 201

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BLAST of Carg19666 vs. TAIR10
Match: AT3G19460.2 (Reticulon family protein)

HSP 1 Score: 201.1 bits (510), Expect = 8.0e-52
Identity = 115/221 (52.04%), Postives = 144/221 (65.16%), Query Frame = 0


Query: 54  VADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFVANVLLLLVLIIFFWAKSASLLN 113
           VADLLLW    G V+ L S+T FW+LFERAGYN LSFV+NVLLLLV I F WAKSA++LN
Sbjct: 6   VADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLN 65

Query: 114 RPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIGRN------------------ 173
           RPLPP+P++EI EE  +  AD+LR+W+N+VLSIA DI I RN                  
Sbjct: 66  RPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLWQTICC 125

Query: 174 FKLFL----------------QVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKY 233
             LFL                QV+L LW +S++G+  N LTLVYIG+LLSLS P+VY+KY
Sbjct: 126 IFLFLHVMYLTVHISFVFAVKQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKY 185

Query: 234 QDHINEKLCVAHRYVQMQYRMLNENVLRKLPLPLNKEKKMQ 241
           QDHI+EK+    ++V+        N+ RK PLP+NKEKK Q
Sbjct: 186 QDHIDEKVNSTSKFVR--------NISRKFPLPINKEKKHQ 218

[Close]

BLAST of Carg19666 vs. TAIR10
Match: AT2G46170.1 (Reticulon family protein)

HSP 1 Score: 139.0 bits (349), Expect = 3.7e-33
Identity = 79/198 (39.90%), Postives = 124/198 (62.63%), Query Frame = 0


Query: 41  RRISVHQALGGGQVADLLLW-NKWYGGVVTLTSATSFWYLFERAGYNFLSFVANVLLLLV 100
           R   VH+ LGGG+ AD+ LW +K   G V L  AT+ W LFE   Y+ LS + ++ +L +
Sbjct: 55  REKPVHKVLGGGKPADVFLWRDKKLSGAV-LGVATAIWVLFELVEYHLLSLLCHISILAL 114

Query: 101 LIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIGRNFKLF 160
             +F W+ + +L+N+  P +P++ + EE   VVA  LR  +N    I R IA+GR+ K F
Sbjct: 115 GGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKF 174

Query: 161 LQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAHRYVQMQYR 220
           L V +GLWI+S +G++FNFLTLVYI  ++  + P++Y+K++D ++     A + +Q QY 
Sbjct: 175 LMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYV 234

Query: 221 MLNENVLRKLPLPLNKEK 238
           + +E VL K+P+   K K
Sbjct: 235 VFDEKVLSKIPIASLKAK 251

[Close]

BLAST of Carg19666 vs. TAIR10
Match: AT4G23630.1 (VIRB2-interacting protein 1)

HSP 1 Score: 139.0 bits (349), Expect = 3.7e-33
Identity = 79/201 (39.30%), Postives = 124/201 (61.69%), Query Frame = 0


Query: 41  RRISVHQALGGGQVADLLLW--NKWYGGVVTLTSATSFWYLFERAGYNFLSFVANVLLLL 100
           R   VH+ LGGG+ AD+ +W   K  GGV  L  AT+ W +FE   Y+ L+ + +V++++
Sbjct: 76  REQPVHKVLGGGKPADIFMWKNKKMSGGV--LGGATAAWVVFELMEYHLLTLLCHVMIVV 135

Query: 101 VLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIGRNFKL 160
           + ++F W+ +   +N+  P +P++ I EE +  +A  LR+ +N   S  R+IA GR+ K 
Sbjct: 136 LAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKK 195

Query: 161 FLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAHRYVQMQY 220
           FL    GLW++S +G  FNFLTL YI ++L  + PL YDKY+D ++     A   ++ QY
Sbjct: 196 FLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQY 255

Query: 221 RMLNENVLRKLPL-PLNKEKK 239
            +L+E VL K+PL PL  +KK
Sbjct: 256 AVLDEKVLSKIPLGPLKNKKK 274

[Close]

BLAST of Carg19666 vs. TAIR10
Match: AT3G54120.1 (Reticulon family protein)

HSP 1 Score: 132.9 bits (333), Expect = 2.7e-31
Identity = 67/164 (40.85%), Postives = 110/164 (67.07%), Query Frame = 0


Query: 40  SRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFVANVLLLLV 99
           +R  ++H+ LGGG VAD++LW K    V  +T   + W +FE   Y   + +++VLLLL+
Sbjct: 10  NRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLL 69

Query: 100 LIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIGRNFKLF 159
            I+F W+KSAS+LNRP PPLP+ +ISE      +  LR+ VN +L ++ DIA+ R+ +L+
Sbjct: 70  SILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELY 129

Query: 160 LQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHI 204
            +VA+ L+++S IGS  +F TL +  +L+ ++ P  Y++Y+D+I
Sbjct: 130 TKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173

[Close]

BLAST of Carg19666 vs. Swiss-Prot
Match: sp|Q9LT71|RTNLK_ARATH (Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.3e-61
Identity = 122/201 (60.70%), Postives = 153/201 (76.12%), Query Frame = 0


Query: 40  SRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFVANVLLLLV 99
           S R+SVHQ+LG G VADLLLW    G V+ L S+T FW+LFERAGYN LSFV+NVLLLLV
Sbjct: 8   SSRVSVHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLV 67

Query: 100 LIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIGRNFKLF 159
            I F WAKSA++LNRPLPP+P++EI EE  +  AD+LR+W+N+VLSIA DI I RN    
Sbjct: 68  AIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRL 127

Query: 160 LQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAHRYVQMQYR 219
           LQV+L LW +S++G+  N LTLVYIG+LLSLS P+VY+KYQDHI+EK+    ++V+    
Sbjct: 128 LQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEKVNSTSKFVR---- 187

Query: 220 MLNENVLRKLPLPLNKEKKMQ 241
               N+ RK PLP+NKEKK Q
Sbjct: 188 ----NISRKFPLPINKEKKHQ 200

[Close]

BLAST of Carg19666 vs. Swiss-Prot
Match: sp|Q6NPD8|RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana OX=3702 GN=RTNLB10 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 4.0e-53
Identity = 105/198 (53.03%), Postives = 147/198 (74.24%), Query Frame = 0


Query: 44  SVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFVANVLLLLVLIIF 103
           SVHQ++  G VADL++W    GG + L S T  W+LFE+ GY+F  FV N  LL V+I+F
Sbjct: 4   SVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILF 63

Query: 104 FWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIGRNFKLFLQVA 163
            WAKSA L NRP+P LP+LEI+EE V +VAD +R+W+N VL++AR+I +GRN K   +V+
Sbjct: 64  LWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVS 123

Query: 164 LGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAHRYVQMQYRMLNE 223
           + LW VSF+G+F NFLT++Y+G++LSL  P +Y++YQD I+EKL + HR +Q QYR ++E
Sbjct: 124 VVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDE 183

Query: 224 NVLRK-LPLPLNKEKKMQ 241
            +L+K +  P NK KKMQ
Sbjct: 184 RLLQKIIAKPTNKIKKMQ 201

[Close]

BLAST of Carg19666 vs. Swiss-Prot
Match: sp|Q8GYH6|RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-34
Identity = 77/197 (39.09%), Postives = 131/197 (66.50%), Query Frame = 0


Query: 41  RRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFVANVLLLLVL 100
           R+I+VHQ +GGG+ ADLLLW + +  +  +  +T  W +FE +G  FLS  ++VLL++++
Sbjct: 28  RQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIM 87

Query: 101 IIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIGRNFKLFL 160
           I F  A+ ++  NR L  LP+L +SEE V+  A   R+ +N +L +A D+ +G +F+LF 
Sbjct: 88  ISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFF 147

Query: 161 QVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAHRYVQMQYRM 220
           +V + LW++S IGS+ +  TL+YIG +LS++ P +Y KYQ  +++     HR +   Y++
Sbjct: 148 KVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKI 207

Query: 221 LNENVLRKLPLPLNKEK 238
           ++ENV+ +L   L+K+K
Sbjct: 208 VDENVISRLSWSLSKDK 224

[Close]

BLAST of Carg19666 vs. Swiss-Prot
Match: sp|Q9SUR3|RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.7e-32
Identity = 79/201 (39.30%), Postives = 124/201 (61.69%), Query Frame = 0


Query: 41  RRISVHQALGGGQVADLLLW--NKWYGGVVTLTSATSFWYLFERAGYNFLSFVANVLLLL 100
           R   VH+ LGGG+ AD+ +W   K  GGV  L  AT+ W +FE   Y+ L+ + +V++++
Sbjct: 76  REQPVHKVLGGGKPADIFMWKNKKMSGGV--LGGATAAWVVFELMEYHLLTLLCHVMIVV 135

Query: 101 VLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIGRNFKL 160
           + ++F W+ +   +N+  P +P++ I EE +  +A  LR+ +N   S  R+IA GR+ K 
Sbjct: 136 LAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKK 195

Query: 161 FLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAHRYVQMQY 220
           FL    GLW++S +G  FNFLTL YI ++L  + PL YDKY+D ++     A   ++ QY
Sbjct: 196 FLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQY 255

Query: 221 RMLNENVLRKLPL-PLNKEKK 239
            +L+E VL K+PL PL  +KK
Sbjct: 256 AVLDEKVLSKIPLGPLKNKKK 274

[Close]

BLAST of Carg19666 vs. Swiss-Prot
Match: sp|O82352|RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.7e-32
Identity = 79/198 (39.90%), Postives = 124/198 (62.63%), Query Frame = 0


Query: 41  RRISVHQALGGGQVADLLLW-NKWYGGVVTLTSATSFWYLFERAGYNFLSFVANVLLLLV 100
           R   VH+ LGGG+ AD+ LW +K   G V L  AT+ W LFE   Y+ LS + ++ +L +
Sbjct: 55  REKPVHKVLGGGKPADVFLWRDKKLSGAV-LGVATAIWVLFELVEYHLLSLLCHISILAL 114

Query: 101 LIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIGRNFKLF 160
             +F W+ + +L+N+  P +P++ + EE   VVA  LR  +N    I R IA+GR+ K F
Sbjct: 115 GGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKF 174

Query: 161 LQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAHRYVQMQYR 220
           L V +GLWI+S +G++FNFLTLVYI  ++  + P++Y+K++D ++     A + +Q QY 
Sbjct: 175 LMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYV 234

Query: 221 MLNENVLRKLPLPLNKEK 238
           + +E VL K+P+   K K
Sbjct: 235 VFDEKVLSKIPIASLKAK 251

[Close]

BLAST of Carg19666 vs. TrEMBL
Match: tr|A0A1S3C273|A0A1S3C273_CUCME (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496185 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 4.7e-91
Identity = 175/207 (84.54%), Postives = 186/207 (89.86%), Query Frame = 0


Query: 34  MVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFVAN 93
           MVG N SRRISVHQALGGG VAD+LLW KW GGVV LTSAT+ WYLFERAGYNFLSFVAN
Sbjct: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60

Query: 94  VLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIG 153
           VLL       FWAKSASLLNRPLPPLPDLEISEE+VS+VA+ELR W+NF LSIARDIAIG
Sbjct: 61  VLLXXXXXXXFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFWINFALSIARDIAIG 120

Query: 154 RNFKLFLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAHRY 213
           RN KLFLQVAL LWIVSFIGSFFNFLTLVYIG+LLSLSAP+VYDKYQDHI+EKLCV HRY
Sbjct: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180

Query: 214 VQMQYRMLNENVLRKLPLPLNKEKKMQ 241
            QMQYR L+ENVLRK+PLPLNKEKKMQ
Sbjct: 181 AQMQYRKLDENVLRKIPLPLNKEKKMQ 207

[Close]

BLAST of Carg19666 vs. TrEMBL
Match: tr|A0A0A0L980|A0A0A0L980_CUCSA (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G199610 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.5e-89
Identity = 174/207 (84.06%), Postives = 185/207 (89.37%), Query Frame = 0


Query: 34  MVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFVAN 93
           MVG N SRRISVHQALGGG VAD+LLW KW GGVV LTSAT+ WYLFERAGYNFLSFVAN
Sbjct: 1   MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVAN 60

Query: 94  VLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIG 153
           VLL       FWAKSASLLNRPLPPLPDLEISEE+VS+VA+ELR  +NF LSIARDIAIG
Sbjct: 61  VLLXXXXXXXFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIG 120

Query: 154 RNFKLFLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAHRY 213
           RN KLFLQVAL LWIVSFIGSFFNFLTLVYIG+LLSLSAP+VYDKYQDHI+EKLCV HRY
Sbjct: 121 RNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRY 180

Query: 214 VQMQYRMLNENVLRKLPLPLNKEKKMQ 241
            QMQYR L+ENVLRK+PLPLNKEKKMQ
Sbjct: 181 AQMQYRKLDENVLRKIPLPLNKEKKMQ 207

[Close]

BLAST of Carg19666 vs. TrEMBL
Match: tr|A0A061E058|A0A061E058_THECC (Reticulon-like protein OS=Theobroma cacao OX=3641 GN=TCM_007136 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.1e-79
Identity = 155/213 (72.77%), Postives = 178/213 (83.57%), Query Frame = 0


Query: 27  SQALAMSMVGPNPSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYN 86
           ++ + + M   NP  R+SVHQALGGG VAD+LLW KW GGVV L SAT+ WYLFERAGYN
Sbjct: 40  TKKVVIVMGDSNPIPRLSVHQALGGGPVADVLLWRKWCGGVVMLASATTLWYLFERAGYN 99

Query: 87  FLSFVANVLLLLVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSI 146
           FLSFVANVLL       FWAKSASLLNRPLPPLP+LEISE+TV  VADEL++W+N+ LSI
Sbjct: 100 FLSFVANVLLXXXXXXXFWAKSASLLNRPLPPLPNLEISEKTVGKVADELQVWINYALSI 159

Query: 147 ARDIAIGRNFKLFLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEK 206
           A DIAIGRN KLFL+VA+GLW++S+IGS FNFLTLVYIG++LSLS PLVYDKYQ HINEK
Sbjct: 160 AHDIAIGRNLKLFLEVAVGLWLLSYIGSLFNFLTLVYIGVILSLSVPLVYDKYQHHINEK 219

Query: 207 LCVAHRYVQMQYRMLNENVLRKLPLPLNKEKKM 240
           L V HR +QMQYR ++E VLRKLPLP NKEKKM
Sbjct: 220 LSVTHRIIQMQYRKIDETVLRKLPLPSNKEKKM 252

[Close]

BLAST of Carg19666 vs. TrEMBL
Match: tr|A0A1R3GZ58|A0A1R3GZ58_9ROSI (Reticulon-like protein OS=Corchorus olitorius OX=93759 GN=COLO4_32598 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.5e-76
Identity = 149/203 (73.40%), Postives = 172/203 (84.73%), Query Frame = 0


Query: 38  NPSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFVANVLLL 97
           NP+ R+SVHQALGGG VAD+LLW KW GGVV L SAT+ WYLFERAGYNFLSFVANVLL 
Sbjct: 5   NPTSRLSVHQALGGGPVADVLLWRKWCGGVVILASATTLWYLFERAGYNFLSFVANVLLX 64

Query: 98  LVLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIGRNFK 157
                 FWAKSASLLNRPLPPLP+LEISE+T+  VADEL++ +NF LSIA DIAIGRN K
Sbjct: 65  XXXXXXFWAKSASLLNRPLPPLPNLEISEKTIGKVADELQVRINFALSIAHDIAIGRNLK 124

Query: 158 LFLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAHRYVQMQ 217
           LFL+VA+GLW++SFIGSFFNFLTLVYIG++L LS P+VY+KYQ  I+EKL V H+ +Q Q
Sbjct: 125 LFLKVAVGLWLLSFIGSFFNFLTLVYIGVILGLSVPVVYEKYQHQIDEKLLVTHKIIQTQ 184

Query: 218 YRMLNENVLRKLPLPLNKEKKMQ 241
           YR ++E VLRKLPLP NKEKKMQ
Sbjct: 185 YRKIDETVLRKLPLPSNKEKKMQ 207

[Close]

BLAST of Carg19666 vs. TrEMBL
Match: tr|M5W1E2|M5W1E2_PRUPE (Reticulon-like protein OS=Prunus persica OX=3760 GN=PRUPE_8G134700 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 4.3e-76
Identity = 149/202 (73.76%), Postives = 174/202 (86.14%), Query Frame = 0


Query: 39  PSRRISVHQALGGGQVADLLLWNKWYGGVVTLTSATSFWYLFERAGYNFLSFVANVLLLL 98
           P RRISVHQALGGG VAD+LLW KW GGV+ LTS  S W+LFERAGYN LSFVANVLLLL
Sbjct: 6   PPRRISVHQALGGGHVADVLLWKKWSGGVLLLTSTASSWFLFERAGYNLLSFVANVLLLL 65

Query: 99  VLIIFFWAKSASLLNRPLPPLPDLEISEETVSVVADELRLWVNFVLSIARDIAIGRNFKL 158
           V+I+F WAKSASLLNRPLPPLPD+EISE +V   AD L  W+N VLSIARDIAIGRN+KL
Sbjct: 66  VVILFLWAKSASLLNRPLPPLPDMEISEASVVKAADALHAWINRVLSIARDIAIGRNWKL 125

Query: 159 FLQVALGLWIVSFIGSFFNFLTLVYIGILLSLSAPLVYDKYQDHINEKLCVAHRYVQMQY 218
           FLQVA  LW+VS+IGSFFNFLTLVYIG++LSLS P+VYDKYQ HI+EKL VA+R +Q QY
Sbjct: 126 FLQVAFCLWLVSYIGSFFNFLTLVYIGVVLSLSVPVVYDKYQGHIDEKLLVANRAIQTQY 185

Query: 219 RMLNENVLRKLPLPLNKEKKMQ 241
           R +++++L+K+PL  NKEKK+Q
Sbjct: 186 RKIDDSILKKIPLRSNKEKKVQ 207

The following BLAST results are available for this feature:

BLAST of Carg19666 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922945.1	1.5e-109	100.00	reticulon-like protein B11 [Cucurbita moschata]	[more]
XP_023552758.1	1.3e-108	99.52	reticulon-like protein B11 [Cucurbita pepo subsp. pepo]	[more]
XP_022984805.1	1.4e-107	98.09	reticulon-like protein B11 isoform X2 [Cucurbita maxima]	[more]
XP_022941946.1	1.9e-91	86.12	reticulon-like protein B11 [Cucurbita moschata] >XP_022941947.1 reticulon-like p...	[more]
XP_022982758.1	3.2e-91	86.12	reticulon-like protein B11 [Cucurbita maxima] >XP_022982772.1 reticulon-like pro...	[more]

BLAST of Carg19666 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G15280.1	2.2e-54	53.03	Reticulon family protein	[more]
AT3G19460.2	8.0e-52	52.04	Reticulon family protein	[more]
AT2G46170.1	3.7e-33	39.90	Reticulon family protein	[more]
AT4G23630.1	3.7e-33	39.30	VIRB2-interacting protein 1	[more]
AT3G54120.1	2.7e-31	40.85	Reticulon family protein	[more]

BLAST of Carg19666 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LT71\|RTNLK_ARATH	5.3e-61	60.70	Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1	[more]
sp\|Q6NPD8\|RTNLJ_ARATH	4.0e-53	53.03	Reticulon-like protein B10 OS=Arabidopsis thaliana OX=3702 GN=RTNLB10 PE=2 SV=1	[more]
sp\|Q8GYH6\|RTNLP_ARATH	1.1e-34	39.09	Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1	[more]
sp\|Q9SUR3\|RTNLA_ARATH	6.7e-32	39.30	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]
sp\|O82352\|RTNLE_ARATH	6.7e-32	39.90	Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1	[more]

BLAST of Carg19666 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C273\|A0A1S3C273_CUCME	4.7e-91	84.54	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496185 PE=4 SV=1	[more]
tr\|A0A0A0L980\|A0A0A0L980_CUCSA	1.5e-89	84.06	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G199610 PE=4 SV=1	[more]
tr\|A0A061E058\|A0A061E058_THECC	1.1e-79	72.77	Reticulon-like protein OS=Theobroma cacao OX=3641 GN=TCM_007136 PE=4 SV=1	[more]
tr\|A0A1R3GZ58\|A0A1R3GZ58_9ROSI	1.5e-76	73.40	Reticulon-like protein OS=Corchorus olitorius OX=93759 GN=COLO4_32598 PE=4 SV=1	[more]
tr\|M5W1E2\|M5W1E2_PRUPE	4.3e-76	73.76	Reticulon-like protein OS=Prunus persica OX=3760 GN=PRUPE_8G134700 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003388	Reticulon

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19666-RA	Carg19666-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 54..207 e-value: 8.4E-48 score: 162.2
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 54..240 score: 34.601
None	No IPR available	PANTHER	PTHR10994:SF125	SUBFAMILY NOT NAMED	coord: 42..239
None	No IPR available	PANTHER	PTHR10994	RETICULON	coord: 42..239

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19666	Cla013096	Watermelon (97103) v1	carwmB0288
Carg19666	Csa3G199610	Cucumber (Chinese Long) v2	carcuB0320
Carg19666	MELO3C019545	Melon (DHL92) v3.5.1	carmeB0296
Carg19666	ClCG05G010270	Watermelon (Charleston Gray)	carwcgB0289
Carg19666	CSPI03G18160	Wild cucumber (PI 183967)	carcpiB0326
Carg19666	Cucsa.244630	Cucumber (Gy14) v1	carcgyB0345
Carg19666	CmaCh16G003440	Cucurbita maxima (Rimu)	carcmaB0406
Carg19666	CmaCh04G004730	Cucurbita maxima (Rimu)	carcmaB0408
Carg19666	CmoCh04G005070	Cucurbita moschata (Rifu)	carcmoB0403
Carg19666	Lsi05G002360	Bottle gourd (USVL1VR-Ls)	carlsiB270
Carg19666	Cp4.1LG01g02500	Cucurbita pepo (Zucchini)	carcpeB0408
Carg19666	CsGy3G018050	Cucumber (Gy14) v2	carcgybB0307
Carg19666	MELO3C019545.2	Melon (DHL92) v3.6.1	carmedB0307
Carg19666	CsaV3_3G018220	Cucumber (Chinese Long) v3	carcucB0326
Carg19666	Cla97C05G092650	Watermelon (97103) v2	carwmbB0304
Carg19666	Bhi01G001280	Wax gourd	carwgoB0382

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19666	Carg08144	Silver-seed gourd	carcarB324

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19666	Wax gourd	carwgoB0383
Carg19666	Cucumber (Gy14) v1	carcgyB0344
Carg19666	Cucumber (Gy14) v1	carcgyB0348
Carg19666	Cucurbita maxima (Rimu)	carcmaB0405
Carg19666	Cucurbita maxima (Rimu)	carcmaB0407
Carg19666	Cucurbita moschata (Rifu)	carcmoB0401
Carg19666	Cucurbita moschata (Rifu)	carcmoB0402
Carg19666	Cucurbita pepo (Zucchini)	carcpeB0407
Carg19666	Cucurbita pepo (Zucchini)	carcpeB0409
Carg19666	Wild cucumber (PI 183967)	carcpiB0329
Carg19666	Cucumber (Chinese Long) v2	carcuB0323
Carg19666	Cucumber (Chinese Long) v3	carcucB0329
Carg19666	Bottle gourd (USVL1VR-Ls)	carlsiB267
Carg19666	Melon (DHL92) v3.5.1	carmeB0295
Carg19666	Melon (DHL92) v3.6.1	carmedB0306
Carg19666	Watermelon (Charleston Gray)	carwcgB0288
Carg19666	Watermelon (97103) v1	carwmB0289
Carg19666	Watermelon (97103) v2	carwmbB0303
Carg19666	Watermelon (97103) v2	carwmbB0305